LOCUS       DAXGCP010000001        66275 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.001, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000001 DAXGCP010000000
VERSION     DAXGCP010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 66275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66275
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.001"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(60..242)
                     /locus_tag="ACFJCW_000001"
     CDS             complement(60..242)
                     /locus_tag="ACFJCW_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150270.1"
                     /translation="MGVCPDARCSAAGIARQIGNGGGIHGTLAFSLLFLSLGHIGMVA
                     YHHIKGESVLPLFLLI"
     gene            complement(298..432)
                     /locus_tag="ACFJCW_000002"
     CDS             complement(298..432)
                     /locus_tag="ACFJCW_000002"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150271.1"
                     /translation="MKFKQFILATVLGATAFSAWADDSYQHIRAVRILLLILSVWCVG
                     "
     gene            complement(614..1273)
                     /gene="ung"
                     /locus_tag="ACFJCW_000003"
     CDS             complement(614..1273)
                     /gene="ung"
                     /locus_tag="ACFJCW_000003"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HFC4150272.1"
                     /translation="MDTWHDALGGEKQQPYFQEILNAVRQERLSGQIIYPPEADVFNA
                     FRLTAFDRVKVVILGQDPYHGVGQAHGLAFSVRQGVRIPPSLLNIYKELETDIEGFSI
                     PAHGCLTAWAEQGILLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLATHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            1354..1761
                     /locus_tag="ACFJCW_000004"
     CDS             1354..1761
                     /locus_tag="ACFJCW_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HFC4150273.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDIGKYAEILRYTGGNRYEVFYRGT
                     HWQAQNTGQEVFEPGTRALIVRKEGNLLIIANP"
     gene            1776..2723
                     /locus_tag="ACFJCW_000005"
     CDS             1776..2723
                     /locus_tag="ACFJCW_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HFC4150274.1"
                     /translation="MEFFIILLAAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRAMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(2830..3900)
                     /locus_tag="ACFJCW_000006"
     CDS             complement(2830..3900)
                     /locus_tag="ACFJCW_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HFC4150275.1"
                     /translation="MYRRKGRGIKPWMGAGAAFAALVWLVYALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIG
                     FMQNTLLPWLKNTIGGYVEIDQASIIAWLQAHTGELSNALKAWFPVLMKQGGNIVSSI
                     GNLLLPPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLMLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LAVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGELMGFVGMLAGLPLAA
                     VTLVLLREGAQKYFAGSFYRGR"
     gene            4085..4360
                     /locus_tag="ACFJCW_000007"
     CDS             4085..4360
                     /locus_tag="ACFJCW_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HFC4150276.1"
                     /translation="MTEQKNKASLIEFPCAFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            4362..4985
                     /gene="lipB"
                     /locus_tag="ACFJCW_000008"
     CDS             4362..4985
                     /gene="lipB"
                     /locus_tag="ACFJCW_000008"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HFC4150277.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLAGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGIYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTQ
                     INPCGYAGMEMTQIADFVQPCPAPDEVASKLTAHLETQLTPKADNNE"
     gene            4978..5961
                     /gene="lipA"
                     /locus_tag="ACFJCW_000009"
     CDS             4978..5961
                     /gene="lipA"
                     /locus_tag="ACFJCW_000009"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HFC4150278.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFTNAAIGAMVRSSYHADEQAAEALRESHGGCGHH"
     gene            6436..6900
                     /gene="bfr"
                     /locus_tag="ACFJCW_000010"
     CDS             6436..6900
                     /gene="bfr"
                     /locus_tag="ACFJCW_000010"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC4150279.1"
                     /translation="MQGNQAVVDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            6928..7401
                     /gene="bfr"
                     /locus_tag="ACFJCW_000011"
     CDS             6928..7401
                     /gene="bfr"
                     /locus_tag="ACFJCW_000011"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HFC4150280.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELAKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            7727..8047
                     /locus_tag="ACFJCW_000012"
     CDS             7727..8047
                     /locus_tag="ACFJCW_000012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4150281.1"
                     /translation="MMGNKLTLPAELPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLNLMTNSADTRQVPS
                     ESGI"
     gene            8096..10654
                     /gene="glnD"
                     /locus_tag="ACFJCW_000013"
     CDS             8096..10654
                     /gene="glnD"
                     /locus_tag="ACFJCW_000013"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HFC4150282.1"
                     /translation="MPENLSSALETFKQQRNAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWAEHFQNSALCLMAVGGFGRGEPYPCSDVDLAVVSPAPLSDGIQEQIARFIQTLW
                     DCKLMPSVKSGSVDELCESVRDDITGDTAFLEARFLFGNRQTADELAEKMNVQRNVAA
                     FIEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLAANLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIRLHLNAKRAEDRLLFDLQPQVAESMGYQDENRRR
                     QSEELMRVFYRAVKTVKQLGGILTPMLRSRVSSTPVRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNSENRRRFAGF
                     FRSGNGLTQTLRFLNLYGVLGRYLPAWEKIVGLLQHDLFHIYPVDDHILAVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAVQGIADARQFAADHF
                     LTEEESDLLAWLVENHLLMSAVAQKEDIQDPGVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRCLAGNDGNPHALFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFEPPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAETQSCNRRISRRSRYMPIAPSITITPEEDYPDRYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERVEDSFTVFSPDLKNPKIQSSLKQALLEQLA"
     gene            10801..12264
                     /gene="guaB"
                     /locus_tag="ACFJCW_000014"
     CDS             10801..12264
                     /gene="guaB"
                     /locus_tag="ACFJCW_000014"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HFC4150283.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTDERVKALVEAGADVIVVDTAHGHSQGVIDRVRWVKETYPHIQVIGG
                     NIATAKAALDLVTVGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIIHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(12601..14976)
                     /gene="rnr"
                     /locus_tag="ACFJCW_000015"
     CDS             complement(12601..14976)
                     /gene="rnr"
                     /locus_tag="ACFJCW_000015"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HFC4150284.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIESLARELSITEDEYVFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLMPMDEGDFVLYERQMRGVMHGDTVTVRPAGIDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEADGVARFKPESGQVIVGKIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHRFSEACAKAAKKIPDHVRKSDLKGRADL
                     CDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVGPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPDVERLCMVCDMTVTYAGNVKEYQFYPAVMRSHAR
                     LTYNQVWEWLSDGIGHPFKTQIDTLYKLFKILQKKRLARGAVEFESVETQMIFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLATLREQL
                     GLLGLQLGGGDNPSPKDYAALAEQFKGRPDAELLQVMMLRSMQQAVYEPHCEGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNRKTYTPNKSWQALGVHTSFCERRADDAGRD
                     VENWLKTYYMRDKVGEIFEGKISGVANFGIFVTLDDIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAGESGRRRKVKLSASAKPAG
                     AAGKGKSKTTAEKKTARCGKVRGRGVPAVAESGKKAKKPVPIKVKKRKGKS"
     gene            15065..15151
                     /locus_tag="ACFJCW_000016"
     tRNA            15065..15151
                     /locus_tag="ACFJCW_000016"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15099..15101,aa:Leu,seq:cag)
     gene            15190..15280
                     /locus_tag="ACFJCW_000017"
     tRNA            15190..15280
                     /locus_tag="ACFJCW_000017"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:15224..15226,aa:Ser,seq:gga)
     gene            complement(15682..17493)
                     /gene="typA"
                     /locus_tag="ACFJCW_000018"
     CDS             complement(15682..17493)
                     /gene="typA"
                     /locus_tag="ACFJCW_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HFC4150285.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGCHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESSDMRPLFDTILKYTPAPSGSADEPLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHEQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLRVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLITPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
     gene            complement(17610..18500)
                     /locus_tag="ACFJCW_000019"
     CDS             complement(17610..18500)
                     /locus_tag="ACFJCW_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HFC4150286.1"
                     /translation="MFPVFHLSGESRRRMLQTALRFPHVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVRAGFNQDTLPFAVIAGFPEIMLDTADGLTKRQG
                     INAWTAGCGLGTDAAAVETVAAVLARNRDEAVVLDADALNILSTDAETRNLARECKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAILGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNWITESM"
     gene            18565..19221
                     /locus_tag="ACFJCW_000020"
     CDS             18565..19221
                     /locus_tag="ACFJCW_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HFC4150287.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAAALPFMWYSAKAGGDMLQWHTRVG
                     LLVLFLLVFRLCWGIWGSDTARFSRFVRGWAGIRGYLKNGIPEHIQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLIRKIHLNFFKLLAVFSAVH
                     IAAVAAYRIFKKKNLVRPMITGFKYIEGKTSIRFAGKAALAAALSVAALAAAAILLLS
                     "
     gene            19650..20732
                     /locus_tag="ACFJCW_000021"
     CDS             19650..20732
                     /locus_tag="ACFJCW_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC4150288.1"
                     /translation="MNYFPIFANLSGRPVLVVGGGAVAARKISLLLKAGAEVGVAAKH
                     LNAELSALAAENKILWLAKEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VGDRDHCSFIFPSVIDRDPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAGFYFPVQLVVRQDADKADGFRGYQGRIERGSVTVGQTVRIEPNGLTAEVSEIIA
                     PKGEVAQAFAGEAATIRLDRDIDVSRGDLFVDKNFPLAPQKHPEATLCWFDERPLNTA
                     RKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRINLQKPVTATPY
                     AENTAAGSFILIDEATYGTVAAGMIL"
     gene            20729..22522
                     /locus_tag="ACFJCW_000022"
                     /pseudo
     CDS             20729..22522
                     /locus_tag="ACFJCW_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
     gene            22549..24320
                     /gene="cysI"
                     /locus_tag="ACFJCW_000023"
                     /pseudo
     CDS             22549..24320
                     /gene="cysI"
                     /locus_tag="ACFJCW_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
     gene            24493..26352
                     /gene="ilvD"
                     /locus_tag="ACFJCW_000024"
     CDS             24493..26352
                     /gene="ilvD"
                     /locus_tag="ACFJCW_000024"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HFC4150289.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQDDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVYTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRIWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGNIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTIEIDIPKRSIRLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVSQIER"
     gene            26394..26696
                     /locus_tag="ACFJCW_000025"
     CDS             26394..26696
                     /locus_tag="ACFJCW_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150290.1"
                     /translation="MIINKFTWAMAVFSAILALVIGSGFTALEYVKEPPAAPYAVSAP
                     KTAGVKPRRILPERNPPCCRLTVQTPRPFQTPAMRTDRIRLTERQQIPFPSSGSAA"
     gene            26734..27507
                     /locus_tag="ACFJCW_000026"
     CDS             26734..27507
                     /locus_tag="ACFJCW_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HFC4150291.1"
                     /translation="MQTTKICYAFRTPSAYGQYLADAGFDYLSLANNHSNGFGAQGIT
                     ATAGNLDELNIKYSGIENRFETAILKKNGVRYGFVSFAPNLAAVKLNDYAKFKKLIRK
                     TKQKTDIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGADVVFGQG
                     AHVTRAVELYHDRFISYSGGNFATYGISGIAPIFKIITDKQGRFVSGNIIPITQVGDK
                     IPKIDPEKTVIERIIYLNHSDFPNGNGLDVSPGGDITRR"
     gene            complement(27603..28655)
                     /gene="bioB"
                     /locus_tag="ACFJCW_000027"
     CDS             complement(27603..28655)
                     /gene="bioB"
                     /locus_tag="ACFJCW_000027"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HFC4150292.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLELVYQAA
                     EVHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTVSVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFEPE
                     GEVAEVEKASGIKADY"
     gene            complement(28862..30238)
                     /gene="mpl"
                     /locus_tag="ACFJCW_000028"
     CDS             complement(28862..30238)
                     /gene="mpl"
                     /locus_tag="ACFJCW_000028"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HFC4150293.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFKVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFQADIYVIGNVARRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFGVSARLPQTPRQDPN
                     SKSPFFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIVCNGQQQSLQDTLDKGCWTPVEKFGTGHGWQIGEVNADGSFDVLLDGK
                     KAGHVAWDLMGGHNRMNALAVIAAARHAGVDVQTACEALGAFKNVKRRMEIKGTANGI
                     TVYDDFAHHPTAIETTIQGLRQRVGGARILAVLEPRSNTMKLGTMKSALPASLKEADQ
                     VFCYAGGADWDVAEALAPLGCRLRVGKDFDTFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            complement(30300..30605)
                     /locus_tag="ACFJCW_000029"
     CDS             complement(30300..30605)
                     /locus_tag="ACFJCW_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC4150294.1"
                     /translation="MRVSKMIGSILLVAAVQTVFSANVYECRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEAVQNPKGNAQKDGSDAGIRPH"
     gene            complement(30617..30970)
                     /locus_tag="ACFJCW_000030"
     CDS             complement(30617..30970)
                     /locus_tag="ACFJCW_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150295.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKYRLVVIANSAWGLLLNLP
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEKQ"
     gene            complement(31232..31429)
                     /locus_tag="ACFJCW_000031"
     CDS             complement(31232..31429)
                     /locus_tag="ACFJCW_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150296.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILSSNAVAAAVLFWIWWKWF"
     gene            complement(31439..32224)
                     /locus_tag="ACFJCW_000032"
     CDS             complement(31439..32224)
                     /locus_tag="ACFJCW_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HFC4150297.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEAKMPSEEVLKLTAVLPEDGIFSVSDGILKKISSLSCADDILTLIDI
                     PLGGTLPDKGDCAVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLLDIYSQADLEIWLAHYEDRVFATALREEKQAVLYGEDLCEPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRAAY"
     gene            complement(32298..33608)
                     /gene="tilS"
                     /locus_tag="ACFJCW_000033"
     CDS             complement(32298..33608)
                     /gene="tilS"
                     /locus_tag="ACFJCW_000033"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HFC4150298.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVCA
                     GKRAGFVPEALHIHHGLSPRADDWADFCRNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAEFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPAVRPLGENGIIWR
                     PLLPFSRQDIWDYARKHGLPNIEDESNTDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLEEVVVQDCRWVCGAGYFDTARWLTFSPRRKTHILRNFLKENGIPVP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFASEQLAKPAFLKDGTISGNLK
                     KILTEHRFVLKRHPFGLPEAMLEQDGILRTVAASDTLAVGGIHKNVKKILQGKRVLPF
                     LRPIWPLVADSGNRPLALANCCADFQISVSDGILPVHPDFPILF"
     gene            complement(33676..34635)
                     /locus_tag="ACFJCW_000034"
     CDS             complement(33676..34635)
                     /locus_tag="ACFJCW_000034"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HFC4150299.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQISQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVVVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLRVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            34847..35248
                     /locus_tag="ACFJCW_000035"
     CDS             34847..35248
                     /locus_tag="ACFJCW_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC4150300.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPHKIKVKGLNHQRRPAPEARLLYEEDAKTAALREECKQL
                     DQFSRITSAHPDGRPTKRDRRQLDRLKKGDW"
     gene            complement(35316..35513)
                     /gene="iscX"
                     /locus_tag="ACFJCW_000036"
     CDS             complement(35316..35513)
                     /gene="iscX"
                     /locus_tag="ACFJCW_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HFC4150301.1"
                     /translation="MKWTDTRRIAEELYDLHGEAIDPKTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            35726..36266
                     /locus_tag="ACFJCW_000037"
                     /pseudo
     CDS             35726..36266
                     /locus_tag="ACFJCW_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(36326..36667)
                     /gene="fdx"
                     /locus_tag="ACFJCW_000038"
     CDS             complement(36326..36667)
                     /gene="fdx"
                     /locus_tag="ACFJCW_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HFC4150302.1"
                     /translation="MPKITVLPHATLCPEGAVIDNAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPAELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(36723..37484)
                     /locus_tag="ACFJCW_000039"
     CDS             complement(36723..37484)
                     /locus_tag="ACFJCW_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HFC4150303.1"
                     /translation="MMGDSVIYYVEQADEPVNRAGERARKTFKYFWRELFWERRRIIS
                     ALDFAMVKVPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGGLTNVEQGESVCV
                     PVGDISDWMFVCNGIPYGGFTVQAMRGQMTEEERTEHDTAWGIDFGDPGQILPVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAMAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLTGWQNVAGLLEPRH"
     gene            complement(37520..38168)
                     /locus_tag="ACFJCW_000040"
                     /pseudo
     CDS             complement(37520..38168)
                     /locus_tag="ACFJCW_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213572.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
     gene            complement(38354..40216)
                     /gene="hscA"
                     /locus_tag="ACFJCW_000041"
     CDS             complement(38354..40216)
                     /gene="hscA"
                     /locus_tag="ACFJCW_000041"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HFC4150304.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDADGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRFIELHTRQGVKTPVEVSAEILKTLKLRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNRLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATFSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVVMVGGSTRMPHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVS
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVQAQIEVKPSYGL
                     DDDTITQMLKDSMGNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEEFAQI
                     QRDIADLQGRLKDGKAEDIRAAVAKLSRSTDNFAAKRMNRNIQRALTGQSVDNI"
     gene            40387..41259
                     /gene="hpnD"
                     /locus_tag="ACFJCW_000042"
     CDS             40387..41259
                     /gene="hpnD"
                     /locus_tag="ACFJCW_000042"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HFC4150305.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKQDAVTVLYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDNAFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCRRVAGVVGCLIARILGFSDGKTLEYADKMGLALQLT
                     NIIRDVGEDARRGRIYLPMEEMQRFDVPASVILQCSPTGNFAELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            41334..42647
                     /gene="hpnE"
                     /locus_tag="ACFJCW_000043"
     CDS             41334..42647
                     /gene="hpnE"
                     /locus_tag="ACFJCW_000043"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HFC4150306.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRVPSAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALAELQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAILATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGIADGTAQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFANRAWADKAHADLKRILPHLGEPEAVRVITEKRATTATDAPPPDL
                     SWLHRHRIFPAGDYLHPHYPATLEAAVQSGFASAEACLQSLNDAV"
     gene            42729..43448
                     /locus_tag="ACFJCW_000044"
     CDS             42729..43448
                     /locus_tag="ACFJCW_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC4150307.1"
                     /translation="MPTLTDKTILVTGASQGLGEQVAKAYAAEGATVILVARHQKKLE
                     KAYDAIVEAGHPEPFAIRFDLMSAEEKEFERFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAGSERKSYGDVL
                     PAFVWWASAESKGRSGEIVYL"
     gene            43614..44285
                     /locus_tag="ACFJCW_000045"
     CDS             43614..44285
                     /locus_tag="ACFJCW_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HFC4150308.1"
                     /translation="MKTVSAAIAFAAAAVSLTGCATESSRSLEVAKVASCNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDSEDRLGSQAKTILVTHLQQTNRFNVLNRTNLSALKQE
                     SGISGKAQNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSTQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVDNLVQAVDNGA
                     WQSNR"
     gene            44295..44662
                     /locus_tag="ACFJCW_000046"
                     /pseudo
     CDS             44295..44662
                     /locus_tag="ACFJCW_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
     gene            44659..45306
                     /locus_tag="ACFJCW_000047"
     CDS             44659..45306
                     /locus_tag="ACFJCW_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HFC4150309.1"
                     /translation="MKPLILGLAAVLALSACQVRKAPDLDYTSFKESKPASILVVPPL
                     NESPDVNGTWGMLASTAAPISEAGYYVFPAAVVEETFKENGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVGAVVNQIANSLTDRGYQVSKTAAYNLLSPYSRNGILKGPRFVEEQPK"
     gene            45699..47465
                     /locus_tag="ACFJCW_000048"
                     /pseudo
     CDS             45699..47465
                     /locus_tag="ACFJCW_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
     gene            47569..48237
                     /gene="hda"
                     /locus_tag="ACFJCW_000049"
     CDS             47569..48237
                     /gene="hda"
                     /locus_tag="ACFJCW_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HFC4150310.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLQHKHDPFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNNGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     NMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            48234..48902
                     /locus_tag="ACFJCW_000050"
     CDS             48234..48902
                     /locus_tag="ACFJCW_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC4150311.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKLHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGIANMIGTQLETGPDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVSEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(49454..50350)
                     /gene="argB"
                     /locus_tag="ACFJCW_000051"
     CDS             complement(49454..50350)
                     /gene="argB"
                     /locus_tag="ACFJCW_000051"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HFC4150312.1"
                     /translation="MEFENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKETMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLVDTPEQNSVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDGLIADGTLYGGMLPKIASAVEAAANGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGRGEDA"
     gene            50520..51650
                     /locus_tag="ACFJCW_000052"
     CDS             50520..51650
                     /locus_tag="ACFJCW_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HFC4150313.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDMKI
                     WITARQHPGETMAEWFVEGLLGRLLDSQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVRGKMLETGVDLFLDIHGDEGLPFVFVAGTEGV
                     PNYNPRISALEAQFKTALLNASPDFQDEYGYEKDAPGKANMTLATNWVGNRFHCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAVLSAILNVAGDLR"
     gene            51724..52575
                     /gene="lgt"
                     /locus_tag="ACFJCW_000053"
     CDS             51724..52575
                     /gene="lgt"
                     /locus_tag="ACFJCW_000053"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HFC4150314.1"
                     /translation="MIIHYQFDPVLIGIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFSRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRITDINAFWA
                     MGFPQAHYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKP
                     RPTGQTAALFLGGYGVFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(52660..53322)
                     /locus_tag="ACFJCW_000054"
     CDS             complement(52660..53322)
                     /locus_tag="ACFJCW_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HFC4150315.1"
                     /translation="MDSRKFTEASKRRLGELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLAPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYDDGEG
                     GSDFYTWCNAYLYGLDIVPTDWFEAADDEAFEELFYPVMALGGIYDEEENGAIRLQFT
                     EGELAELASELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            53356..53462
                     /locus_tag="ACFJCW_000055"
                     /pseudo
     CDS             53356..53462
                     /locus_tag="ACFJCW_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(53521..55314)
                     /locus_tag="ACFJCW_000056"
     CDS             complement(53521..55314)
                     /locus_tag="ACFJCW_000056"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HFC4150316.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLTQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGADIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGKAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSQIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNAESYKFISQKISTETGEEPRADIVFGIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     ILAATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            55560..56669
                     /gene="proB"
                     /locus_tag="ACFJCW_000057"
     CDS             55560..56669
                     /gene="proB"
                     /locus_tag="ACFJCW_000057"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HFC4150317.1"
                     /translation="MKYKRIVFKVGTSSITRSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPVKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     SRADFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDKIEHINHEIIEMAGGSGSANGTGGMLTKIK
                     AATIAAESGVPVYICSSLKPDSLAEAAEHQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     SVYVDEGAEHALSEQGKSLLMSGIAGIEGHFSRMDTVTVYSKATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            56682..57944
                     /locus_tag="ACFJCW_000058"
     CDS             56682..57944
                     /locus_tag="ACFJCW_000058"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HFC4150318.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADAEEKNRALLAMADSLEAAAEDI
                     LAANRLDLKAAAGKIPDSMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KTGLAQTRIDPEAVQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTGRPSVCNSMEVLLVHEGIAADFLPKLER
                     LLVRGRIEAGLPPVRFRLDPQAARYIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIEARGTHHSDGIVTENRHAADYFTTHIDSAAVYINASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPIGLKELTSYKYIVQGTGQVRE"
     gene            complement(58120..61164)
                     /locus_tag="ACFJCW_000059"
     CDS             complement(58120..61164)
                     /locus_tag="ACFJCW_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC4150319.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPEFSLMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEAAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMQSESKTSPVRPVFKEITLEEATRALSSAALRETKKRYIDAFEKNGTAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQEKGQAEAKSPDVSQGQSVSDGTAVRDARRRVSVNLKEPNKATVSAEA
                     RISRLIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIHIEEPAAPDA
                     WVVEPPEVPEVAVPEIDILPPPPVSEIYNRTYEPPAGFEQAQRSRIAETDHLAADVLN
                     GGWQEETAAIADDGSEGAAERSSGQYLSETEAFGHDSQAVCPFEDVPSERPSCRVSDT
                     EADEGAFQSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVK
                     VKVVDSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETIPGKTCMGL
                     ELPNPKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTG
                     SGKSVGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGITHLLAPVVTDMKLAANA
                     LNWCVNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLP
                     FIVVVVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANI
                     PTRIAFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRV
                     VEYLKQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGV
                     QRALRIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            61329..62009
                     /locus_tag="ACFJCW_000060"
     CDS             61329..62009
                     /locus_tag="ACFJCW_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150320.1"
                     /translation="MIFQTVWFSDVVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASVGGGQLAQMNYHLLAVNLVTLMVDTSAALWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     IGILDAANAFPSEILWTAALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSERGIWL"
     gene            62038..62397
                     /locus_tag="ACFJCW_000061"
     CDS             62038..62397
                     /locus_tag="ACFJCW_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HFC4150321.1"
                     /translation="MLSNILPLSIGAIFGTTARWLLNLAVPASLSPATGNLFANWTGA
                     LLIGIFAETVSHPQWKLLLITGFFGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGTAVK"
     gene            62475..62581
                     /locus_tag="ACFJCW_000062"
                     /pseudo
     CDS             62475..62581
                     /locus_tag="ACFJCW_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(63002..63538)
                     /locus_tag="ACFJCW_000063"
     CDS             complement(63002..63538)
                     /locus_tag="ACFJCW_000063"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HFC4150322.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLSNDEDEITETVLMSKDEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(63572..63928)
                     /gene="folB"
                     /locus_tag="ACFJCW_000064"
     CDS             complement(63572..63928)
                     /gene="folB"
                     /locus_tag="ACFJCW_000064"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HFC4150323.1"
                     /translation="MDKIFLHGMKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVHVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            63984..64586
                     /gene="plsY"
                     /locus_tag="ACFJCW_000065"
     CDS             63984..64586
                     /gene="plsY"
                     /locus_tag="ACFJCW_000065"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HFC4150324.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALIWLVMAFGFKVSSLAALVATTAAPLAALFF
                     MPHPSWIFATLAIAILVLLRHKSNILNLIKGKEGKIGEKR"
     gene            64678..65523
                     /locus_tag="ACFJCW_000066"
     CDS             64678..65523
                     /locus_tag="ACFJCW_000066"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HFC4150325.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGLYNLEGSEAQKVGEYRQGIALLRQAQNLPAELSDFAAHIQKILPSPELYCGSPWLA
                     QSLIRIGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     VILIDPPYEEKQDYRRVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLVPD
                     NYLHAELHVHAPKTDGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            complement(65631..65963)
                     /locus_tag="ACFJCW_000067"
     CDS             complement(65631..65963)
                     /locus_tag="ACFJCW_000067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGK_0946 family protein"
                     /protein_id="HFC4150326.1"
                     /translation="MKNLKNISVVAVCAVLLAACASENSVANYAIGDDSAVIKAGRNR
                     AEARISRAELAQHRRQRKNVSEELALEREKRANKHDAIRQGMGTAAGGLMLLNGVVGT
                     VGVMKSVF"
     gene            complement(66013..66261)
                     /locus_tag="ACFJCW_000068"
     CDS             complement(66013..66261)
                     /locus_tag="ACFJCW_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150327.1"
                     /translation="MKMKKLILLSVAAMLVTACTYADRRFVTQESAAEIQAKSRAIQI
                     SERAERAEYRKERREEMMDAARAIKKANENSPNIYFIR"
BASE COUNT        15572 a        19227 c        16697 g        14779 t
ORIGIN      
        1 agaacaaata aaaaagcaaa caaaaatatc catctttcaa actcatattt tgcaataacc
       61 tagataagca agaacagggg cagaacggat tcgcctttga tgtggtggta ggcaaccatt
      121 ccaatatgtc ccagcgacaa aaacagcaat gaaaatgcca gcgtgccgtg aattcctccg
      181 ccattgccga tttgacgggc aatgcctgcg gcggaacagc gagcatcagg gcatacgccc
      241 aatgcccaat ttggtgacgg cggtgttggc ggggcggttt ttacgttggc ggattcccta
      301 ccctacgcac caaacagaca atatcagcag caggattctg actgcacgga tatgttggta
      361 tgaatcgtcc gcccaagcgg aaaaggctgt cgcgcccaaa acagtggcaa gaataaattg
      421 cttgaatttc atgatgttgc ttcttttgca caaagcgttc ggaatagtga agcccgcagc
      481 ctatggcttt gcggcagtcg cagctttaca agcggtattg caggaaacct taaaacacga
      541 tcattgcatc aagagctgtt cgaattccgc caaatgaacc tgacacgcaa actttgacgc
      601 ttgaatacgg cattcatagc ttccagttta tcggttcgat accgtgttga ctcaaatagc
      661 tgtttgcctg tgaaaaatgg cggcagccaa aaaaaccgcg atatgccgac agaggagacg
      721 gatgaggcgc ggtcagtatc aaatgatttt gactgtctat cagcctccct ttttgttgtg
      781 catacccacc ccacaacatg aagacaaggt gcttgcggtg tgtcgcaagc tgcctgatga
      841 cggtatcggt aaagcgttcc cagcctaaaa gggcgtgcga atgcgcctgt cctgcacgca
      901 ccgtcaaaac cgtgttcaga agcaatatgc cctgctccgc ccacgctgtc aggcagccgt
      961 gcgcgggaat ggaaaagcct tcgatgtcgg tttccaattc tttgtaaata ttgagtaaag
     1021 acggcggtat gcggacaccc tgccggacgg aaaatgccaa accgtgcgcc tgccctaccc
     1081 cgtgatacgg atcttgtccg agaatgacga ctttgacccg gtcgaacgct gtcagccgga
     1141 atgcgttgaa cacatcggcc tccggcggat agataatttg ccccgacaaa cgttcctgcc
     1201 tgaccgcatt taaaatttcc tgaaaatacg gctgctgttt ttcgccgccg agtgcatcgt
     1261 gccaagtgtc catatctgcc ctatcctttc aaattcggct atactgctga tattgcgtta
     1321 ttttgtcaaa cgacgcgctt tgtggggaaa tgtatgactg tatggtttgt tgccgctgtt
     1381 gccgtcttaa tcatcgaatt attgacggga acggtttatc ttttggttgt cagcgcggct
     1441 ttggcgggtt cgggcattgc ctacgggctg actggcagca cgcctgccgc cgtcttgacc
     1501 gccgcactgc tttccgcgct gggcatttgg ttcgtacatg ccaaaaccgc cgtgggaaaa
     1561 gttgaaacgg attcatatca ggatttggat atcggaaaat atgccgaaat cctccgatac
     1621 acaggcggca accgttacga agttttttat cgcggtacgc actggcaggc gcaaaatacg
     1681 gggcaggaag tgtttgaacc gggaacgcgc gccctcatcg tccgcaaaga aggtaacctt
     1741 cttatcatcg caaaccctta acactcggag gaattatgga atttttcatt atcttgttgg
     1801 cagccgtcgc cgttttcggc ttcaaatcct ttgtcgtcat cccccagcag gaagtccacg
     1861 ttgtcgaaag gctcgggcgt ttccatcgcg ccctgacggc cggtttgaat attttgattc
     1921 cctttatcga ccgcgtcgcc taccgccatt cgctgaaaga aatcccttta gacgtaccca
     1981 gccaggtctg catcacgcgc gataatacgc aattgactgt tgacggcatc atctatttcc
     2041 aagtaaccga tcccaaactc gcctcatacg gttcgagcaa ctacattatg gcaattaccc
     2101 agcttgccca aacgacgctg cgttccgtta tcgggcgtat ggagttggac aaaacgtttg
     2161 aagaacgcga cgaaatcaac agtaccgtcg tctccgccct cgatgaagcc gccggggctt
     2221 ggggtgtgaa agtcctccgt tacgaaatca aggatttggt tccgccgcaa gaaatccttc
     2281 gcgcaatgca ggcacaaatt accgccgaac gcgaaaaacg cgcccgtatt gccgaatccg
     2341 aaggtcgtaa aatcgaacaa atcaaccttg ccagtggtca gcgtgaagcc gaaatccaac
     2401 aatccgaagg cgaggctcag gctgcggtca atgcgtccaa tgccgagaaa atcgcccgca
     2461 tcaaccgcgc caaaggcgaa gcggaatccc tgcgccttgt tgccgaagcc aatgccgaag
     2521 ccatccgtca aattgccgcc gcccttcaaa cccaaggcgg ggcggatgcg gtcaatctga
     2581 agattgcgga acaatacgta gccgcgttca acaatcttgc caaagaaagc aatacgctga
     2641 ttatgcccgc caatgttgcc gacatcggca gcctgatttc tgccggcatg aaaattatcg
     2701 acagcagcaa aaccgccaaa taagccgtga tgaaaatacc gtctgaagct ctgttttcgg
     2761 gtttcagacg gtatttttat ttaaacccga acagggttgt attccgcttc aaatatgttt
     2821 cggaaccgtc tacctgcccc ggtaaaaact gccggcaaaa tatttctgcg cgccctcgcg
     2881 aagcaagacc aaggttacgg cggccaaagg caatccggcc aacattccga caaagcccat
     2941 cagctctccg aacgccatca gcgaaaagat aacccaaaac ggcgacaggc cgatacggtc
     3001 tcctacaatt ttcggcgtaa tgaaaaaact ttcgagaaac tgaccgacgg caaaaaccgc
     3061 ccaaacagcc aagattccgt tccacgaacc gaactggagc aaggctgcaa cagtggcaag
     3121 cagcaatccc gtaaacgcac ccaaataggg gacaaacacc aaaataccgg caaccatacc
     3181 gatggcaaat cccgaatcca gtccgactag catcaatccc aaaccgtaaa ccaagcccat
     3241 aatcagcatc accagaagct gaccgcgcaa aaattcgccc aatacctcgt tcaaattacc
     3301 cgtaatgcgc gtataagcac cggcaaaacg cctcggaacc agtttggcga tgccgcacga
     3361 ccaccgctgc caatccagca ggaaatagta aagcagcaag ggcggcagca gcaggttgcc
     3421 gatactgctg acaatattgc cgccctgttt catcaaaacg ggaaaccacg ccttaagcgc
     3481 gttgctcaac tcgcccgtat gcgcctgaag ccacgcaata atagatgcct gatcgatttc
     3541 cacatatccg ccgattgtat ttttcaacca cggcagcagc gtgttctgca taaaaccgat
     3601 taattggggc aggcgagatg ccaaattatt gaactgcccg accagcatag ggacaataat
     3661 caacaataat gccaacaaca aaatcaagga aaacaccatc acagacatcg aagcggatgc
     3721 acggttcaaa ccctttttct gcaaccattc gaccaaaggg tccaacacat acgccagcac
     3781 cgccgcaacc gcaaacggag tcaaagtatc gccgagcgcg taaaccagcc agaccaaggc
     3841 ggcaaacgcc gcgccggcac ccatccacgg cttgatgccc cgtccttttc tccgatacat
     3901 aaaatccacc cttccgaaaa taatattgcg cgccagtata gcagaaccgc cgcgccgtca
     3961 aaaaagcctc cgccttcccg atagcctgtt atcgtggttt aggctaaaat actgcacatc
     4021 cgatgccctc tgaaaggcaa acccgccttc agacggcata ccgtacacga taaggcagca
     4081 catcatgacc gaacaaaaaa acaaagcatc cctcatcgaa tttccctgcg ccttcccatt
     4141 gaaagtgatg ggcgcggtgc atcccgagtt cgagcaggcg gtattggaca ccgtccgcct
     4201 tcacgccccc gacacgcagg cgcaccacat caccacgcgt ccgagcagca aaggcaacta
     4261 taccggtgcc accgttcagg taaaggttga aaaccaagaa caattggaca acatctaccg
     4321 cgcgctgact tcgcacgaac tggtcaaagt ggtactttga gatgaaaatc atacacaaag
     4381 gtttggtcga atatctgccg acttttgaag cgatgaaaac ctttaatgcc ggacggaatg
     4441 cagacaccga agacgaattg tgggtcgtcg aacacccgcc cgtctttacg caaggactgg
     4501 cgggaaaacc cgagcacctg ctgattaggg acgacatccc cgtcgtccaa atcgaccggg
     4561 gcgggcagat tacctatcac gggcccgggc aattggtcgt ttatacgatg attgatttca
     4621 aacggcgcaa aaccagcgtc cgcaacatcg tttccgcgct tgaaaacagc atcatcgcca
     4681 cattggcgga atacggcatc gaagcggcgg cagatcccaa acgccccggc atttacgtcg
     4741 gcgaacgcaa aatcgcctca ctggggctgc gtatcaaaaa cggttccgtc tatcacggac
     4801 tcgcactcaa cgtcaatatg gatttaagcc cgtttaccca aatcaacccc tgcggctacg
     4861 ccggtatgga aatgacgcaa atcgcggatt ttgtccaacc ctgccccgcg ccggacgaag
     4921 tcgcctccaa actcaccgca caccttgaaa cacaactcac accgaaagca gacaacaatg
     4981 agtgaaatca aaaccgacga ccccaaacgc ggcatcaaac tcagaggcgc ggacaaaacc
     5041 gcccgcatcc ccatcaaagt cgtccccctt caggaaaaac tgaaaaagcc cgaatggata
     5101 cgcgccaaac tcccatcgcg caaattcttt gaaatcaaag acattttgcg cgaacaaaag
     5161 atgcacaccg tttgcgagga agcctcctgc cccaacatcg gcgaatgctt cagcaaaggc
     5221 acggcgacct tcatgattat gggcgacatc tgcacccgcc gctgcccgtt ctgcgacgtg
     5281 ggacacggcc gtccgaatat gctcgacccc gacgagccga aaaacctcgc agaatccgtc
     5341 aaagccatga acctgcgtta cgtcgtcatc acctcggttg accgcgacga cctgcgcgac
     5401 ggcggcgccc aacacttcgc cgactgcatc aaagccatcc gcgaaaccag cccgaacacc
     5461 aaaatcgaaa tcctcgtccc cgacttccga ggccgcttgg acatcgcact gaaaatcctt
     5521 gccgaaaccc cgcccgacgt gatgaaccac aacttggaaa cccatccgag cctgtacaga
     5581 aaagcccgtc ccggtgccaa ttatcaacat tctttagact tattaaaacg ttataaagaa
     5641 atgatgccgc atatcccgac caaatccggc attatggtag gcttgggcga aacagacgaa
     5701 gacgtgcgtg aaattatgcg cgatatgcgg gcgcacaata tcgagatgat taccatcgga
     5761 cagtacctcc agccttcaga cggacacttg cctgtcttgc gctacgttac acccgaacaa
     5821 ttcaaaatat ttgaaaaaga agcatacgaa ctgggcttta ccaatgccgc catcggcgcg
     5881 atggtacgtt caagttacca tgccgacgaa caggcggcgg aagccttacg cgaaagccac
     5941 ggcggttgcg ggcatcatta aactcggaac accgttccga agtaaaaaat aatttcctac
     6001 gctgctgtct gccgccttgt ttgatgtaaa caacatcaat ttgaattgtc catgccgtct
     6061 gaaagtcctt cagacggcat aatttattcc caaaatccga taatctcaaa agaatctgtc
     6121 ggttaatgag aaagattcat tataaatttt gataaaaaac cgtgctctat ttgttttttg
     6181 ctatggttaa caagtgtaaa tgttctttat tgatgagatg gattcttagt tttagcagca
     6241 aaaaaaaccg ataagaaaca gcatactgat ttggaaggca tcggggaata cgccctattt
     6301 attttgataa ttgtttgtat tttaaataga aaatttgtca tgccgacagc ttttgcatac
     6361 aatgcacgca tcccgaacag cgttacagaa cgccgtttaa ccgcacgaaa cccaaattaa
     6421 gaaaagagag atattatgca aggcaatcaa gctgttgttg attacatgaa cgaattgctg
     6481 tccggcgagc tggcggcacg cgaccaatac ttcatccact cccgcctcta ctccgaatgg
     6541 ggctacacca aactttttga acgtctcaat cacgagatgg aagaagaaac cacacacgcc
     6601 gaagacttca tccgacgcat cctgatgctg ggcggtacgc cgaaaatggc acgcgccgaa
     6661 ctgaatatcg gcacggacgt ggtttcctgc ctcaaagccg acctgcaaac cgaatacgaa
     6721 gtgcgcgacg ctttgaaaaa aggcatcaaa ctgtgcgaag aggctcaaga ctatgttacg
     6781 cgcgacctga tggttgccca actgaaagac accgaagaag accacgcaca ctggttggaa
     6841 cagcagctgc gcctgatcga gctgattggc gaaggcaact actaccaaag ccaactgtaa
     6901 tccgtattag gaataaaagg agtccgtatg aaaggcgacc gtttggttat ccgcgagctg
     6961 aacaaaaact taggcttgct gctggtaacc attaaccaat atttccttca cgcccgtatt
     7021 ttgaaaaact ggggctttga agaactgggc gaacatttct tcaaacaatc aatcgtagaa
     7081 atgaaagctg ccgacgattt gattgaacgc atcctcttcc ttgagggatt gcccaatttg
     7141 caagagctgg ccaagcttct gatcggtgaa tctaccgaag aaatcatcgc ctgcgatttg
     7201 accaaagaac aggaaaaaca cgaagccctg cttgccgcca tcgccacagc agaagcgcaa
     7261 caggattatg tcagccgtga tttgttggaa aaacaaaaag atactaacga agaacacatc
     7321 gactggctcg aaacccagca ggaactgatc ggcaaaatcg gtttgccgaa ctacctgcaa
     7381 acagcggcgc aagaggacta aaacacaaac cactgccaaa tacagcagtc ccctgcatca
     7441 tcagacggca tatccgtata aacgggtatg ccgtttttct ttgccggttt acgaataaaa
     7501 tctaaattga tttgaatcaa tactcgataa cggtttttgt ttgataatac cgatatgaaa
     7561 tctagattgt ttgtttgctg tttcccaatc cgtcttgatt ttacctcttt cctcttgatg
     7621 tgtgtgtgtt tgggtgtggc tgccgccacc cctttttttt ggcttttatg tgaagtaaaa
     7681 tccgtaacag caaatactta acttttaacc atttatccgg aaacaaatga tgggcaacaa
     7741 attgactctg cctgccgaat tgcctgacga acaggatttg cgggcggtat tggcatacaa
     7801 tatgcggctt ttccgcgtga acaagggttg gtcgcaagag gaattggcgc ggcaatgcgg
     7861 tttggacagg acttatgtgt cggcagtcga gcgcaaacgc tggaacattg ccctgtcgaa
     7921 tatcgaaaaa atggcggcgg ctttgggcgt ggcggcgtat cagttgctgc tgccgccgca
     7981 ggaacggttg aacctgatga ccaattccgc cgatacccga caagtgccgt ctgaaagcgg
     8041 tatttgaccg ccgaaccatc cgcctccctt tttcccgcca atcgaaagaa taaaaatgcc
     8101 tgaaaacctg tcttcagcac tggaaacctt caaacagcag cgcaatgccg ccgaagcgca
     8161 ttatttgaaa gccaaccgcg tgtcggtatt tttcagagaa tacacggcgg cagtcgaaac
     8221 cttgctggcg gcattgtggg cagaacattt tcaaaacagc gcgttatgcc tgatggcggt
     8281 aggcggcttc gggcgcggcg aaccgtatcc ctgttcggat gtggatttgg cggttgtctc
     8341 ccctgccccg ctttcagacg gcattcagga acagattgcc cgatttatcc aaactctgtg
     8401 ggattgcaaa ctaatgccgt ctgtaaaaag cggcagcgtt gacgaactgt gcgaaagcgt
     8461 gcgcgacgat attacggggg acacagcgtt tttagaggct aggtttttgt ttggcaaccg
     8521 ccaaacagca gacgaattgg cggaaaaaat gaacgtgcaa cgcaatgtag cggcatttat
     8581 cgaagcaaaa ttggtggaga tggaacaccg ccacgccaaa tcgcaaggtt cgggggcggt
     8641 gttggagccg aatatcaaaa gctgtccggg cggtctgcgc gacatccaca ccctgctttg
     8701 gatagcgaag gcgcaaggct tggcggccaa cctgcccgac ctgctcaaac agcggatttt
     8761 gacacgtgcc gaagccggta tgctttcgca cggctaccgc cgcctcgccc acatccgcat
     8821 ccggctgcat ttaaacgcca agcgcgccga agaccgcctg cttttcgatt tgcagccgca
     8881 agttgccgaa agtatgggtt atcaagatga aaaccgccgc cgtcaaagcg aagaactgat
     8941 gcgcgtgttt taccgtgcgg tcaaaaccgt caaacaactg ggcggcatcc tcacgcccat
     9001 gctgcgaagc cgcgtttcct ccacgccggt gcgcgttacc ctgcggattg acgacgacta
     9061 catccaagtc aacaaccaaa tcgccgcgcg gcacaccgat atttttttca gacggcccga
     9121 acacattttc aaaatcgtcg aaatcatgca gcagcgcaac gacattactg cgctcgaacc
     9181 gcaaaccctg cgcgcatggt ggggggcgac gcgcaaaatc aaccgcagct tctaccaaaa
     9241 ttctgaaaac cgtcgccgct tcgccggttt tttccgcagc ggcaacggac tgacccaaac
     9301 cctgcgcttt ctcaacctct acggcgtgtt gggccgctat ctgcccgcgt gggaaaaaat
     9361 cgtcggcctg cttcaacacg acttgttcca catctatccc gtggacgacc acatccttgc
     9421 cgtcgtccgc aacgtccgcc gccttgccct ggatatgcac agccatgagc tgccctacgc
     9481 ctccgcgctg atgcagtcct ttgaaaaaca agacatcctc taccttgccg ccttcttcca
     9541 cgacatcgcc aaaggacgcg gcggcgacca tgccgtacaa ggcatcgcag acgcgcgcca
     9601 atttgccgcc gaccacttcc tgaccgaaga agaaagcgac ctgctcgcct ggctggttga
     9661 aaaccacctc cttatgtctg ccgtcgccca aaaagaagac atccaagacc ccggcgtact
     9721 cgatgccttc tgcaaacgcg tccaaaccca cgaacgcctc agcgcgctct acctcctgac
     9781 catttccgac atacgcggca ccaatcccaa gctgtggaac gcctggcgcg ccagcctgct
     9841 ggaaagcctg ttccacgccg ccggacgctg cctcgcaggc aacgacggca acccgcacgc
     9901 cctcttcggc cgccgccggc aggaagccgc cgacttactt acccgcgccg ccgtccccga
     9961 aaaacagcag aaaaaactat ggaacgcgct cggttccgcc tatttcgccc gccatcagtc
    10021 ccgcgaaatc ctgtggcacg ccgccaacct cgtacacgac tttgaacccc ccatcgtccg
    10081 cagccgcatc ctaccccaaa gcgacagctt tcaagtgatg gtctttatgc ccaacggccc
    10141 gcgcctgttc gcccgcctct gccgcatctt cagccgccac ggcttcgata tcctcgccgc
    10201 ccgcgccttt atcaccgaac acgactacat cctcgacacc ttcatcgtgc aaatcccctc
    10261 gcagcacgcc cccgaagact accccgacat ccaaagcgcg ctcgaagccg aactcaacag
    10321 ctttatccac ggacacaccg ttgccgaaac ccaaagctgc aaccgccgca tcagccgccg
    10381 cagccgctat atgcctattg cgccaagcat caccatcacc cccgaagaag actatccgga
    10441 ccggtattcc gtcgaaatca ccgccgtcaa ccgccccttc ctgctcgccg acatggcgga
    10501 agtcttcttc gcccacaacg tcagcctgcg ctacgccaaa atctccacgt tggacgaacg
    10561 cgtcgaagac agctttaccg tcttcagccc cgacttgaaa aacccaaaaa tccagtcctc
    10621 attgaaacag gctttgctgg aacagttggc ataagcaccc tgccggtttt cagacggcat
    10681 cccgccgcca cgccgtatgc cgtctgaagg cgggggatat tgcaaacaat ataaactgtc
    10741 aagccgccgg caacgtgcta taatgccgtg catcttgcac aaaccgaaag accgagcatt
    10801 atgcgtatcg tagaaaaagc ctatactttc gacgatgttt tgttggttcc cgcacattcg
    10861 accgtgctgc cgcgagacgt taaacttcaa accaagctta cccgcgaaat cacactcaac
    10921 ctccccctgc tttccgccgc gatggatacc gttaccgagg cgcgcctcgc catttcgatg
    10981 gcacaggaag gcggcatcgg catcatccat aaaaacatgc cgcccgaaat gcaggcgcgc
    11041 gccgtttcca aagtaaaacg ccacgaaagc ggcgtggtca aagaccccgt aaccgttgcg
    11101 ccgacaacgc tcatccgcga agtcttggaa atgcgcgcgc agcgcaaacg caaaatgtcc
    11161 ggcctgcccg tcgttgaaaa cggcaaagtc gtcggcatcg taaccaaccg cgacctgcgt
    11221 tttgaaaacc gcgtcgattt gcccgtttcc gccattatga ccccgcgcga acgtctggtt
    11281 accgtccccg aaggcacaag catagacgaa gcgcgcgaac tgatgcacac gcacaaagtc
    11341 gaacgcgttt tggtcctgaa cgaaaaagac gaactcaaag gtctgattac cgttaaagat
    11401 attttaaaaa ccaccgagtt tcccaatgcc aacaaagact ccgaaggccg tctgcgcgtc
    11461 ggtgcggcag tcggcaccgg cggcgacacc gacgagcgcg tcaaagcctt ggtcgaagcc
    11521 ggcgcggacg tgattgtcgt cgatactgcc cacggtcata gccaaggcgt gatcgaccgc
    11581 gtgcgttggg tcaaagaaac ctatccgcac atccaagtca tcggcggcaa catcgccact
    11641 gccaaagccg cattggattt ggtcaccgtc ggcgcggatg ccgtcaaagt cggtatcggt
    11701 ccgggatcga tttgcaccac ccgtatcgtg gcaggcgtgg gcgtgccgca actgaccgcc
    11761 attcacaacg ttgccgaagc cctcaaaggc acgggcgttc cgctgattgc cgacggcggc
    11821 atccgcttct ccggcgacat cgccaaagcc ctcgccgcag gcgcgtacag cgtcatgctc
    11881 ggcggtatgt ttgccggcac ggaagaagcc ccgggcgaaa tcgaactcta ccaaggccgc
    11941 tcgtacaaat cctatcgcgg tatgggttcc ttgggcgcga tgagccaagg ttctgccgac
    12001 cgctacttcc aagacaaaac cgacagcacc gacaaatacg tccccgaagg catcgaaggc
    12061 cgcgttccct acaaaggccc gattgtgaac atcatccacc aactgaccgg cggactgcgt
    12121 tccagtatgg gttatttggg ttgcgccaat attgccgaaa tgcacgaaaa agccgaattt
    12181 gtggaaatca cttccgcagg tatgagcgaa tcgcacgttc acgacgttca aattaccaaa
    12241 gaagcgccga attaccaccg ctgatttgaa cagcctttca ggacaaatgc cgtctgaaac
    12301 ctaatttccg agtttcagac ggcatttttt gtccgttcaa ggcaagccgc acgggctgat
    12361 tgcgcggaca gaaaaagcca ttctgacgga cacgccgaaa gaatgaaaat gccgtctgaa
    12421 cgccgtttgc accccgtctg ccgaataccg tcggccttta aaacggcggt ggaaataaac
    12481 gcaatctttc aatacgggcg tttcgattgg tcggaaatga tgcgccggcc gccatatcaa
    12541 aaaatcgggc ggcggcttcg ggaaagtatg ccccgccctc cccaagccgc cccgtcagca
    12601 ttatgatttg cctttccgtt ttttgacctt aatcggaacc ggtttctttg cctttttccc
    12661 cgattcggca acggcaggca cgccccttcc ccttactttg ccgcatcggg ctgttttttt
    12721 ctcggcggtg gttttcgatt tccctttccc cgccgcccct gccggtttgg cagatgcgga
    12781 taatttgacc ttccgccgcc tgccgctttc tccggcaatt aggacaaagt cgatttttcc
    12841 atcatccaaa tcggcacgcg cgacccggac ggcaaccctg tcccccatat tgaaacggat
    12901 gccgctgcgt tcgccttcga ttgccatgat ttcggggcgg aagttgaaat aatcttcgcc
    12961 caaatcgctg atatgtacca gaccgtcgat atggatatcg tccaaagtga caaatattcc
    13021 aaaatttgcc accccggaga ttttgccttc aaatatttca ccgaccttat cgcgcatata
    13081 ataagttttc agccagtttt ccacatcgcg gccagcatcg tcggcacggc gttcgcaaaa
    13141 cgaagtatgc acgcccaaag cctgccagct tttgtttggc gtgtaggttt tccggttcaa
    13201 tacggctttg atggcacggt ggacggtcag gtcgggatag cggcggatgg gcgaggtaaa
    13261 gtgggcgtat gcttcataag ccaaaccaaa atgcccttcg caatgcggtt cgtaaaccgc
    13321 ctgctgcatg gagcgcaaca tcatgacttg cagcaattcg gcatccggcc tgcctttgaa
    13381 ttgttcggca agcgcggcat agtctttcgg cgacgggttg tcgccgccgc caagttgaag
    13441 ccccaacaga ccgagctgct cgcgcagggt ggcgagtttt tcgggcgtgg ggcccaaatg
    13501 gttgcggaac aaagccgtat gtttgttttt caacagaaaa tccgccgcgc aaacattcgc
    13561 cgccagcata cattcttcaa tcagcttgtg ggcatcgttg cggacgacgg gcacgatttt
    13621 ttcgattttg ccgttgtcgt cgaaaatcat ctgggtttcg acgctttcaa actccaccgc
    13681 cccgcgcgcc agacgttttt tctgcaaaat tttaaacagc ttgtaaagcg tgtcgatttg
    13741 ggttttgaac ggatgcccga taccgtctga aagccattcc caaacttggt tgtaagtcag
    13801 ccttgcgtgg gagcgcatca cggcgggata aaattgatat tccttgacat tgcccgcgta
    13861 agtgacggtc atatcgcaca ccatacacaa acgctcgaca tccggattga gcgagcagat
    13921 gccgttggat aagttttccg gcagcatcgg aattacacgg cgcgggaaat aaacgctggt
    13981 gctgcgttcc tgcgcgtccg tatcaatcgc atcatctggg ccgacataat ggctgacatc
    14041 ggcaatcgcc acgaccaaac ggtaattgcg cccgattttc tcggcaaaca ccgcatcgtc
    14101 gaaatcgcgc gccgtttcgc cgtctatcgt taccaaagga aggtcgcaca aatcggcgcg
    14161 gcctttcaaa tcgcttttac gaacatggtc gggaattttt ttcgcggctt tggcacacgc
    14221 ttcactgaat cggtgcggca aatgatgctt gcgcacggca atttcgattt ccatcccgct
    14281 gtcggcataa tcacccaaaa cttcaatgat ttttgccact gcaggccggt tttgctcggg
    14341 ataaacctca attttgccga cgataacctg accggattcg ggtttgaaac gcgccacgcc
    14401 gtccgcttcc aacacgatgc tttggttcag acgcttgtct tccggctcca aaatcgccac
    14461 gcccctatcc atataaaaac ggccgacaac tttgctttgc gcgcgttcga caatatccag
    14521 aaccgtccct tcgcggcggc ccctgcggtc gatacccgca ggacggacgg taacggtgtc
    14581 gccgtgcatg acaccacgca tctggcgttc gtataaaacg aaatcccctt cgtccatcgg
    14641 catgagcggc acggcgaagc cgaaaccgtc cttatgcgcc tcgacgcggc atttgaccaa
    14701 atccagcttg tccgccgcgc aaactgcgcc tcggcggttg attaaaacct gaccgtcccg
    14761 cgccatcgcc ttcagacggc gttcaaaaaa gacatactcg tcttccgtaa tcgacagctc
    14821 gcgtgcaagc gattcgattt ttgaaggcac acctttgcgc tccaacaatt cgattatcca
    14881 ttcccgactg ggcaaaggat gttcataacg ctgtttttca cgacttaaaa acgggtcttt
    14941 ttcccgtaaa tttaaagatt taatattttt attcattttg actgttgaca ttctctttat
    15001 gaactatata atagcaactt ctttgcggca ggacactgta ccgcaaaaca gcaaataaag
    15061 caaagcccgg gtggcggaat tggtagacgc gccagcttca ggtgctggta tcctcacggg
    15121 tgtggaagtt cgagtcttct cccgggcacc aaataacaaa ttatcccgat taggataatt
    15181 tccgccatta gagaggtgga tgagtggttt aagtcgcacg cctggaaagc gtgtatacgt
    15241 gaatagcgta tcgagggttc gaatcccttc ctctctgcca aatacaaatc ccaaactttt
    15301 acagtttggg attttttgtt acttacgtat tgattttatt ttattgcgta aaatcagcca
    15361 caacctatta ccctacgtta ccattgatta ctatccgtta ccgttttttt atggtatgtt
    15421 ttgcggtatg ttttatcctc ttcctaagcc tgtaaggact caaaaggcgt atcccttcaa
    15481 acgatattgt tcgacatgct gccgggaaac cgaacccgat accgaaacgc gacggggcga
    15541 tatgccgctg gaaaaatggc ggcagtttct tgattggata ggaaaaactc cgtctgaaac
    15601 agcttcaaga agccgcaaag cccgtccgaa taaaaaatac cgtctgagat ttttcagacg
    15661 gcatcgcgta tcatttaaac attaatccag ctttttaaaa tgacggcggc gttccaattc
    15721 gctcaggtaa cgcttgcgca ggcggatgga ttgcggcgtg atttccacca gctcgtcatc
    15781 gtcgataaac tcgaccgcgc cttccagcgt cagtttgatc ggcgtgatca ggcgcaccgc
    15841 ttcgtcggta ccgctggcac ggatattggt gagttttttg cctttgagcg ggttgaccac
    15901 caaatcgttg tcgcggctgt ggatgccgat aatcatacct tcgtagattt tgtcgttggg
    15961 cgatacgaac atacggccgc ggtcttcaag attccacaag gcgtaagcaa ccgcctcgcc
    16021 ctgctcttgg gacaccagta cgccgttgtg gcggccgggc atatcgggtt tgacgggcgc
    16081 gtagtcgtcg aacacgtggc tcatcagccc gacgccgcgc gtcagggtca tgaattcgcc
    16141 ttggaaaccg atcaagccgc gcgctggaat atggtattcg aggcgggtgc gtccgttgcc
    16201 gtcgctttcc atattggtca gttcgccacg gcggcggccg agttcttcca ttaccgcgcc
    16261 ttggttgtcg tcgggtacgt ccacagtcag gttttcataa ggttcgcatt tttgaccgtc
    16321 gatgtctcgg tacacgacgc gcggcttgcc gacggcgagt tcgtagcctt cgcggcgcat
    16381 attttccagc aaaatcgtca ggtgcagttc gccgcgcccg gatacgcgga acacgtcggc
    16441 atcggcggtg tcttccacgc gcagggcaac gttggtcagc aattcttttt gcaggcggtc
    16501 gcggatttgg cggctggtca cgaatttgcc ttctgtacct gcgagcgggc tggtgtttac
    16561 cataaagtcc atcgtcagcg tcggttcgtc cactctcaac atcggcaggc ctttggggtt
    16621 gtctttgtcg gtgatggtta cgccgatgcc gatgtcttcg ataccggaaa taatcacgat
    16681 gtcgccggct tcggcttctt caagcggcac gcgttccaag cctttgaaac ccaaaagctg
    16741 gttgatgcgg ccttgggcga tttgctgctc gtggttcatc acggcaacgg tttgaccggg
    16801 tttgatgcgt ccgttcaaga tacgaccgat accgaggcgg ccggtgtagt tgtcgtagtc
    16861 gagttgggaa atttgcagtt gcagcggctc gtccgcgctg ccgctcggtg caggcgtgta
    16921 ttttaggatg gtgtcgaaca gcgggcgcat atcgctgctc tcgtcggttt cttccagctt
    16981 ggcaaagccg ctcaaacctg aagcgtaaac aatcgggaaa tccaactgct cgtcggtcgc
    17041 acccaagttg tcgaacaact cgaaagtctg gtcgataacc cagctcggac gggcggacgg
    17101 tttgtcgatt ttgttgatga cgacaatcgg tttcagcccc aaagccaagg cttttttggt
    17161 cacgaaacgg gtttgcggca tcggaccttc ctgtgcgtcc accaacaaga cgacgcaatc
    17221 caccatcccc aaaacgcgct ccacttcgcc gccgaagtcg gcgtgtcccg gcgtgtcgac
    17281 gatattgatg tggcagcctt cgtaatcgat ggcggtgttt ttggcgagga tggtgatgcc
    17341 gcgttctttt tcaaggtcgt tgctgtccat cacgcgctcg tcaacctgct ggttggcgcg
    17401 gaatgtgccg gattggcgca gcagttggtc gaccaatgtg gttttgccgt ggtcgacgtg
    17461 tgcgatgatg gcgatgttgc ggatttgttt cataattaat gtttttcaaa aactgtaaga
    17521 gataactgcg tattatacca cgatttaccg gacagtattt ggaaaatgaa gatgccgtct
    17581 gaagcccttg cctttcagac ggcatcttct tacatacttt cagttatcca gttgcgcagc
    17641 caccttgccg ccggggcgat ttcccctgcc aacagcccag ccgcaatgcc tgccgattcc
    17701 tttataacat ccgccgccgc gccgtgcagc cacgcgcccg cgcaggcggc ttcaaaaacc
    17761 ggcacgccct gtgcgagcag actgccgatg atgccgccca atacgtcgcc actgcccgcc
    17821 gttgccaatc ccgcattgcc gctttcgttg acatagattt ccgtatcgga cgcggcaacc
    17881 aatgttttgt gcccctttaa aaccacggtt gcaccgagaa ttgcccctat cttccttact
    17941 gccgccgtcc gatccgcctg aacctgtgca actgtcgttc caagcaggcg cgcggcttcg
    18001 gcggggtgcg gcgttaaaat caggttttta cactcgcgcg ccagatttcg ggtttcggca
    18061 tcggttgata atatgttcag cgcgtccgca tccaaaacga cggcttcgtc tcgattccgc
    18121 gccaacactg ccgccaccgt ttccactgcc gccgcatctg tacccaagcc gcaacccgcc
    18181 gtccaagcgt ttatgccttg acgcttggtc aaaccgtctg ccgtgtccaa cataatctcg
    18241 ggaaaaccgg caatgacggc aaaaggcagc gtatcctgat tgaaacctgc ccgcacctta
    18301 ccgcagccga gatacattgc cgccgatgcc gccaatacgg gcgcgccgct catccctgcc
    18361 gatccgccga ctacggcgag cgtgccgaaa gtccctttgt gcgaatcttc cgcacgggct
    18421 ttgaaaacat ggggaaaacg caatgccgtc tgaagcatcc ggcggcggct ttcgcctgaa
    18481 agatggaaaa cgggaaacat ttcccctcca atcggttaaa attaaggctc gaaaacaaac
    18541 cgattctacc gccggaaacc gattatgaaa aacaaaacca aagtctggga cttccccacc
    18601 cgccttttcc actggctgct tgccgcagcc ctgcccttta tgtggtatag cgcaaaagcc
    18661 ggcggcgata tgctgcaatg gcacacgcgc gtcgggctgc tcgtcctttt cctgctcgta
    18721 ttccgcctct gctggggcat ttggggcagc gataccgccc gtttctcccg tttcgtccga
    18781 ggttgggcag gtatacgcgg ctatctgaaa aacggcattc ccgaacatat ccagcccgga
    18841 cacaacccct tgggcgcact gatggtcgtt gcgcttttgg ccgccgtctc atttcaagtc
    18901 ggcacggggc tttttgccgc cgatgaaaac accttcagca ccaacggcta cctcaaccat
    18961 ttggtttccg aacatacggg cagccttata cggaaaatcc acctcaactt tttcaagctg
    19021 ctcgccgttt tttccgcagt ccacatcgcc gccgtcgccg cataccgcat attcaaaaag
    19081 aaaaacctcg tccgcccgat gataaccggc ttcaaataca tcgaaggcaa aacctcaatc
    19141 cgctttgccg gcaaagccgc gcttgccgcc gcattatcgg ttgccgcgct tgccgcagcc
    19201 gccatcctgc tcctgtcctg aaacccgaca tcatgccgtc tgaagccctt ttctgccttt
    19261 ctgacggcat tttccccacc gcacaaacgg tctgaatgcc cgaaacggct tcaggccgtt
    19321 tttccgtcca aaaccgttat atagcggatt aacaaaaatc aggacaaggc ggcgggccgc
    19381 aggcagtacg aatggtacgg aaccggttcg cccggtgctt gggcgcctta gggaaccgtt
    19441 ccctttgagc cggggcgggg caacgccgta ccggtttttg ttaatccgct ataaaacgga
    19501 aaaccgccgc atccgcagcc gccccccata tagctttcag cttctaacaa atgccttttt
    19561 attatttaaa atgacccgca ttccgacaaa aatgccgcga cgcaccgtat cggaaacaag
    19621 gtgcgggcaa acagcaaagg agtcagccag tgaattattt tcccattttc gccaacctct
    19681 ccggccgccc cgtattggtc gtaggcggcg gcgcggtcgc cgcacgcaaa atcagcctgc
    19741 tgctgaaggc gggcgcagag gtcggggttg ccgcaaaaca cctgaatgcc gaactctccg
    19801 cgttggcggc ggaaaacaaa atcctgtggc ttgccaaaga atttcgtgcc gaacacatcc
    19861 gcacggtttt cctcatcatt gcggcaagca gcgaccaagc cctcaaccgg cgcgttttcc
    19921 atcttgccga aagctgccaa aagccggtca acgtggtggg cgaccgtgac cattgcagct
    19981 tcatcttccc gtcggttatc gaccgcgacc ctgttcagat tgccgtttcc agctccggca
    20041 gcgcgcccgt cctcgcccgc ctgctgcgtg aaaggctgga agccttgctg ccgccgtctt
    20101 tgggcgatat ggcggaaatt tcaggaaggt ggcgcgatgc cggtttttat ttccccgtcc
    20161 aactggtcgt ccgccaagat gccgacaagg ccgacggttt ccgaggctat caggggcgca
    20221 tcgaacgcgg ttcggtcacc gtcgggcaaa ccgtccgcat cgaaccgaac gggctgaccg
    20281 ccgaagtgtc cgaaatcatc gcgccgaaag gggaagtggc gcaggctttt gccggcgagg
    20341 cggcaaccat ccggctggac cgcgacatcg atgtttcgcg cggcgatctt tttgtcgata
    20401 aaaatttccc gctcgccccg caaaaacatc cggaagccac gctttgctgg tttgacgaac
    20461 gcccgctcaa caccgcgcgc aaatacctgc tcaagcacgg cacgcaaacc gtgccggcaa
    20521 aagtcgggga aattgaaagc gttttggatg tccgcacgct ggaacaagag gccggcgcgg
    20581 aatccttaaa gatgaacgac atcgccaaag tccgcatcaa ccttcaaaaa cccgttacgg
    20641 caacgcctta tgcggaaaac accgccgccg gttcgtttat cctgatagac gaagcgacat
    20701 acggtactgt tgcggcaggt atgattttat gagtgaacac gatatgcaga acacaaatcc
    20761 gccattaccg cctatgccgc ccgaaatcac gcagctcctg tgtcggggct gtccggctac
    20821 gcttgggcaa aagcaggaaa cggggcatcc gcagggctgc ccgcgcttca gacggcattg
    20881 ccggcggcag aacctttttc cgtaaccgtc ctttccgcct cgcaaaccgg caatgcgaaa
    20941 tccgttgccg acaaagcggc ggacagcctg aaagccgccg gcatccaagt caggcgcgcc
    21001 gaactgaaag gctacaaggc gaaaaacatc gccggcgaac gccgcctgct gctggttacg
    21061 tccacccagg gcgaaggcga accgccggaa gaagccgtcg tgctgcacaa actgctgaac
    21121 tgcaaaaaag ccccgaaatt ggacaaactc caatttgccg tactgggttt gggcgacagc
    21181 tcctatccga atttctgccg ggcgggcaaa gatttcgaca aacgttttga agaattgggc
    21241 gcaaaacgcc tgctcgaacg cgttgatgcg gatttggact ttgccgccgc cgcagacgga
    21301 tggacaggcc gcattgtcgc gcgcttaaaa gaagaagccg caaaaaaccg ggcaacgccc
    21361 gcgccgcagg caacgtcccc ccgccggcct tcagacggca tcggagggca ggtactgcaa
    21421 ggcagacccc tttcccgccg ccctgctggc caatcagaaa atcaccgccc gccaatccga
    21481 taaagacgtg cgccacatcg aaatcgattt gagcggttcg gatttgcact acctcccggg
    21541 cgacgcgctc ggcgtttggt ttgacaacga tccggcactg gtcggggaaa tcctagacct
    21601 gctcggcatc gatccggcaa cggaaataca ggcgggcgga aaaaccctgc cggttgcctc
    21661 cgcactgtta tcccatttcg aactcacgca aaacaccccc gcctttgtca aaggctatgc
    21721 cacgttcgcc gatgatgacg aactcgaccg tattgctgcc gacaacgccg ttttgcaagg
    21781 ctttgtgcaa agcacgccga ttgccggtgt gctgcaccgc ttcccggcaa aactgacggc
    21841 ggaacaattc gccggcctgc tgcgcccgct tgcgccgcgc ctgtattcga tttcctcgtc
    21901 gcaggcggaa gcgggggacg aagtgcacct gaccgtcggc gcagtgcgtt tcgaacacga
    21961 agggcgcgcc agggcgggcg gcgcatcggg tttctttgcc gaccggctgg aagaggacgg
    22021 cacggtgcgc gtgtttgtgg aacgcaacga cggcttcagg ctgcccgaag acagccgcaa
    22081 gccgattgtg atgatcggct ccggtaccgg cgtcgcaccg ttccgcgcct tcgtccaaca
    22141 acgtgccgca gaaaatgcgg aaggcagaaa ctggctgatt ttcggcaatc cgcattttgc
    22201 cgccgacttc ctctatcaga ccgaatggca gcagtttgcc aaagacggct tcctgcacag
    22261 atatgacttc gcctggtcgc gcgatcagga agaaaaaatc tatgtgcagg acaaaatccg
    22321 cgaacaggcg gaaggacttt ggcaatggct gcaggaaggc gcgcatatct atgtgtgcgg
    22381 cgatgcggca aaaatggcaa aagaagtgga agccgccttg ctggatgtga ttatcggggc
    22441 agggcattcg gacgaagacg gcgcagaagg atatttggat atgctgcgcg aagaaaaacg
    22501 ctatcagcgt gatgtttatt gattaaatat aatcgggagg aacacaaaat gaccgtacag
    22561 gccaagacaa aaggtttggc gtggcaagaa aagccgctat ccgacaacga acgcctgaaa
    22621 accgaaagca attttttacg cggcacgatt ttggacgatt tgaaagaccc gctcacgggc
    22681 ggcttcaaag gcgacaactt ccaactcatc cgcttccaca gtatgtatga gcaggatggc
    22741 cgcgacatcc gcaccgaggc aaaactcgag cccttgaaat ttatgctttt gcgctgccgg
    22801 ctgccggcgg gatcatcaaa ccgtcccagt ggatagaact ggacaaattc gcccgggaaa
    22861 agagtcatta ccgctccatc cggctaacca accggcaaac cttccaattt cacggcgtgc
    22921 cgaaaaccaa gttgcagacg atgccccgcc tcttgcacag cctgggtttg gattccatcg
    22981 ctacggcggc ggatatgaac cgcaatgtgc tttgcacctc caacccgatc gagtccgagc
    23041 tgcaccggca ggcttacgaa tacgcgaaaa agatttccga acacctgctg ccgcgcacgc
    23101 gcggttatct ggatatgtgg gtggacggca aaaaagttca aagttccgac gacttccttc
    23161 aagaaggcga gccgattttg ggcaaaacct atctgccgcg aaaattcaaa accgcagtcg
    23221 tcatcccgcc cttgaacgat gtggactgct acggtaacga tttggatttc gtcgccgttt
    23281 cagacggcaa cggacagctt gccggcttca atgttttggc gggcggcggg ctttcgacgg
    23341 aacacggcaa cggcaacggc aacaccaaaa cctatccgaa catttcactg gaactgggtt
    23401 tcgtgcctcc ggaacacgca ctgaaggccg ccgaagcggt ggtaaccacg cagcgcaact
    23461 tcggcaaccg cagccaccgc aaaaacgacc gcacccgcta caccattcaa aatatgggct
    23521 tggacaactt ccgcacggaa gtcgaacgcc gtatgggtat gccgttcaaa cccatacggc
    23581 cgttcaagtt taccgggcgc ggcgaccgca tcggccgggt gaaaggcata gacggcaact
    23641 ggcatttgac ccttttcatc gaaagcgggc gtttggttga cgaaggcggg aaacagcttc
    23701 tgaccggcgt gttggaaatc gccaaaatcc acaaaggcgg cttccgcatc accgccaacc
    23761 aaaacctcat cgtggcaaat gtgcccgaag gaggcaaagc ccggatcgaa cagctcgccc
    23821 gctcatacgg gctgatacgc gacggtgtca gcaagctgcg cgaaaatgcg atgtcgtgcg
    23881 tttccttccc gacctgcccg ctggcaatgg cggaagccga acgcgtgttg ccggacttca
    23941 tcggcgagct ggataagatt atggcggaac acggcgcgtc ggacgactac atcgttaccc
    24001 gcattaccgg ctgcccgaac ggctgcggac gggcgatgtt ggcggaaatc ggactggtcg
    24061 gcaaagccgt gggacgctac aacctccaca tcggcggcga ccgcgaaggc gtacgcatcc
    24121 cccgcctcta caaagaaaac atcaccctgc cggaaatcct ttccgaattg gaagacctga
    24181 tcggcaaatg ggcggcggga cgcgataccg acgaaggttt cggcgatttc gccatacgga
    24241 cgggcatcgt caaacccgtg ttggatgcgc ccgtcgattt ttgggacgca tccaaagccg
    24301 tcccgattgc gcgcgcctga acccgtcccc cgcattcctg cggggatgtt cttttttgcc
    24361 gcacacgttt ccattccgca aaattccgat acttggtata aaatcccccc ttttcccact
    24421 ctaaaaaacc gtacccgatg ccgtctgaaa cagccctgcc tttcagacgg tataggcaca
    24481 aggaaacaca ctatgccaga ataccgctcc aaaacctcca cccacggccg caatatggcg
    24541 ggcgcgcgcg cattgtggcg cgccaccggc gtgatggaaa ccgacttcgg caagcccatc
    24601 atcgccgttg ccaactcctt cacccaattc gtgcccggcc atgtccacct gcacaatatg
    24661 ggccagctgg ttgcccgcga gattgaaaaa gcgggtgcaa ttgccaaaga attcaacacc
    24721 atcgccatcg acgacggcat cgccatgggg cacagcggta tgttgtactc cctgcccagc
    24781 cgcgatttga ttgccgactc catcgaatat atggtcaacg cccactgcgc cgacgcgctg
    24841 gtgtgcattt ccaactgcga caaaatcacc ccgggaatgc tgattgccgc catgcgcctg
    24901 aacatcccca ccatcttcgt ctccggcggc ccgatggaag cgggcaaggt catcggcgtg
    24961 gcaaacatcc aacccgaacg ccgtttggac ttgattgacg ccatgatcga atcggcggac
    25021 gacaatgtca gcaaccggca agtcgaagaa gtcgaacaaa acgcctgccc gacctgcggc
    25081 tcgtgttcgg gtatgtttac ggcaaactcg atgaactgcc tgaccgaagc gctcggtctg
    25141 tccctgcccg gcaacggttc gtatttggcg acccacgcag gccgcaaaga attgttcctc
    25201 gaagcagggc gtatgattgt cgaaatcacc aaacgctatt acgagcaaga cgacgaaacc
    25261 gtgctgccgc gcagcattgc caccaaaaaa gcgtttgaaa acgccatgac gatggatatt
    25321 gcgatgggag gcagcaccaa taccatcctg cacttgctcg ccgtcgccaa cgaagcgggc
    25381 gtggatttca aaatggcaga catcgaccgc ttaagccgcg tcgtgccctg catctgcaaa
    25441 accgcgccca acaaccacga ctactatatg gaagacgtgc accgcgccgg cggcatcttc
    25501 gccattctga aagaacttga caaagcgggc aaactgcaca ccgacgtgta cacgatccac
    25561 gcgccgacac tgaaagacgc gattgaaaaa tgggacgtca ccaatcccga aaacacccgc
    25621 gccatcgaac gtttcaaagc ggctcccggc ggcgtgcgca ccactcaggc gttctcgcaa
    25681 aaccgtattt ggaaaaccct cgaccttgac cgcgaaaaag gctgtatccg cgacgtggca
    25741 cacgcctact cgcaagacgg cggtttggcg gtcttattcg gcaacatcgc cgagcgcggc
    25801 tgcgtggtaa aaaccgcagg cgtggacgag agcatcctca aattcaccgg ccgcgcgcgc
    25861 gtgtttgaaa gccaggaagc cgccgtcgaa ggtattttgg gcaaccaaat cgtcgccggc
    25921 aacatcgtca tcatccgcta cgaaggcccg aaaggcggcc cgggtatgca ggaaatgcta
    25981 tacccgacct cctacctgaa atccaaaggc ttgggcaaag cctgcgccct cttaaccgac
    26041 ggacgcttct ccggcggcac atcaggtttg tccatcggac acgcctcgcc cgaagcggcg
    26101 gaaggcggcg caatcggttt ggtacacgaa ggcgatacga ttgaaatcga catccccaaa
    26161 cgcagcatcc gccttgtcat ttccgatgaa gagcttgccg cacgccgtgc cgaaatggaa
    26221 gctcgcggca gcaaagcgtg gaaaccggaa aaccgcgacc gctacgtctc cgccgcatta
    26281 agggcttacg gcgcgatggc gacttccgcc gacaaaggcg cggtgcgcga cgtatcgcaa
    26341 atcgagagat aagccccaaa acgtgcggca aatgccgtct gaacagtaaa ggtatgatta
    26401 ttaacaaatt tacctgggcg atggcggtat tttccgcaat tttggccctc gttatcggca
    26461 gcggctttac cgcgctcgag tatgtaaaag agccgcctgc cgccccttat gctgtttccg
    26521 cgccgaaaac cgccggggtc aagcctcggc gcatcctgcc ggaacggaat cccccgtgct
    26581 gccgattgac ggttcaaacc ccgcgcccgt ttcaaacacc ggcgatgcgg acggacagga
    26641 tacgcctgac ggaaaggcag cagataccgt ttccatcatc ggggtcggcg gcataaggta
    26701 cgctgtttga cgaaggcggt acgccgaaaa aatgtgcaaa ccaccaaaat atgctatgca
    26761 ttccgaacgc cctccgcata cgggcaatac cttgccgacg cgggattcga ctacctcagc
    26821 ctcgcaaaca accacagcaa cggcttcggc gcgcaaggca tcacggcaac ggcaggcaac
    26881 cttgacgaat tgaacatcaa atattcgggc atcgaaaaca ggtttgaaac cgccatcctg
    26941 aagaaaaacg gcgtgagata cggcttcgtc tccttcgccc ccaaccttgc cgccgtcaaa
    27001 ctgaacgatt acgccaaatt caaaaaactg attcggaaaa ccaaacaaaa aaccgacatc
    27061 gtcattgtga tgttccacgg cggcgcggaa gggaaacagg ctgaacacct gccgttcgat
    27121 accgaaatct tctatgggga aaacaggggc aacgtcgtcg agtttgcgcg gctcgccgtc
    27181 gattccggcg cggatgtcgt attcgggcag ggggcgcacg ttactcgcgc cgtcgaactt
    27241 taccacgacc gcttcatctc ttacagcggc ggcaactttg ccacctacgg catcagcggc
    27301 attgcgccga ttttcaaaat tatcaccgac aaacaggggc ggttcgtttc cggcaacatt
    27361 atccccatca ctcaagtcgg cgataaaatc cccaaaatcg accctgaaaa aactgttatt
    27421 gagcggatta tttatctgaa ccatagcgac ttccccaacg ggaacggact ggatgtctcg
    27481 cccggcggcg acatcacgcg ccggtaaaaa gatattggaa attccgtccg aacaaatgcc
    27541 gtctgaaagc cttttttcag gtttcagacg gcattcaagt ttcagacggc atttttcaat
    27601 cgtcaataat ccgctttaat cccggaggct ttttccactt cggcgacctc gccttccggc
    27661 tcaaactgca agggatacag gttaagcttt tccatcagga ttctatcgcc gtcctcatca
    27721 ggattgcctg tggtcaacag cttgtcgccg taaaaaatcg agttcgcacc cgccatgaag
    27781 cacatcgcct gcatcgcttc aggcatattg ctgcgccctg ccgagaggcg gacataactt
    27841 tgcggcatcg taatccgcgc tacggaaacc gtacggacaa attcggtcca atccaaatct
    27901 tcggcatcgg caagcggcgt gccttccact ttgaccaacc ggttaatcgg cacgctttcg
    27961 ggctgcgggt cgaggttggc gaggctggca atcagcccgg cgcgttcggc gcgggtttcg
    28021 ttcatcccga cgatgccgcc gcagcagact ttcaaaccgg cgttgcggac tttgcccaag
    28081 gtatccatac ggtcttcgtg ccggcgtgtg tggatgatgt cgttgtagcg gtcggggtcg
    28141 gtgtcgaggt tgtggttgta ataatccaag cccgcctctt tcaagtcttc cgccatacct
    28201 tcttcgagca taccgaacgt gccgcaggtt tccataccta agcccttgac ggctttgatg
    28261 attgcggaaa ccgtctccac gtctttgggt ttggggccgc gccatgccgc gcccatacaa
    28321 aaccggcttg cgccgcgcga tttggcgatt ttggcttttt cgacgatttc atccacatcc
    28381 atcatctgct ctttgcccaa attggtgttg tggtgcgctg attgcggaca gtaggcgcaa
    28441 tcttcgggac aaccgccggt tttgatggac aacagcgtgg aaagctggat ttcgcgcggg
    28501 ttgaaatttt ggcggtggac ttctgccgcc tgatagacaa gttctaaaaa cggcagtccg
    28561 aaaagtgcct cgacatcgca ttttttccaa tagcgcgcgg tgggatgagg cttgcactcg
    28621 gtcttacggc gcaaggcgac gggggatacg gtcataatgt gttctttcgt atttacagcg
    28681 gcgcaatgac gctgacaggc aaaccgccgg cgcaatgacg gcggttgcgg gtaatcaaat
    28741 ggctgaaaac agcggcggca agtgtaacgc gtttgaaaat acggggcaaa cggtttttcc
    28801 gcctttgtgc cgcgcagccg ggcaatgccg tctaaagggc tttcagacgg cattgcccgg
    28861 gctatctcaa agcgtccagc agtttggtgt gtattccgcc gaaaccgccg ttgctcatca
    28921 ccaaaatatg gtcgccggtt cgggcgtttt tcacaatttc ggcaacgaag gtatcgaaat
    28981 ctttaccgac gcgcagcctg cagcccaaag gcgcgagggc ttcggcaacg tcccagtccg
    29041 cgccgccggc gtagcagaac acttggtcgg cttctttgag gcttgcgggc agggcggact
    29101 tcatcgtgcc gagtttcatg gtgttggaac gcggctcgag gacggcgagg atgcgcgcgc
    29161 cgccgacacg ttggcgcaaa ccttgaatcg tggtttcgat ggcggtcggg tggtgggcga
    29221 aatcgtcgta aacggtgatg ccgtttgccg tgcctttgat ttccatgcgg cgtttgacgt
    29281 ttttaaacgc acccaaggct tcgcaggccg tctgaacatc gactccggca tggcgtgcgg
    29341 cagcgatgac ggcgagcgcg ttcatgcggt tgtgtccgcc catcaaatcc catgcgacgt
    29401 gtccggcttt tttgccgtca agcaatacgt cgaacgagcc gtcggcattg acttcaccaa
    29461 tctgccagcc gtgtccggtg ccgaattttt ccaccggcgt ccagcagcct ttgtccaaag
    29521 tatcttgcag gctttgctgc tgtccgttgc agacgatgag gccttcggat ggtacggtgc
    29581 gcacgaggtg gtggaactgg gtctgtatcg cgcccaagtc ggcgaagatg tcggcgtggt
    29641 cgaattccag attgttcaac acggcggtac gcgggcgata atgcacgaat ttggagcgtt
    29701 tgtcgaaaaa ggcggtgtcg tattcgtcgg cttcgatgac gaaaaacggc gatttgctgt
    29761 tcgggtcttg acgcggcgtt tgcggtaggc gggcggaaac gccgaaattt tccggtacac
    29821 cgccgatgag gaagcccggc gcgagtccgg catattccaa gacccaggcg agcatggacg
    29881 cggtggtcgt tttgccgtgc gtccctgcca cgccgagtac ccaatgatgg tgcagcacgt
    29941 tttcagccag ccattgcggg ccggaaatat aaggcagccc acggttcaaa atcgcctcga
    30001 ccacatccat cccgcgcctg gcgacattgc cgatgacgta aatatcggct tgaaattcct
    30061 ccaactgcgc ggcatcgaag ccttcgtgta cgcctatgcc caaggcttcg agctgggtgc
    30121 tcatcggcgg atacatcttc gcgtcgcaac cgctgacttt gaacccggct tctttggcaa
    30181 tggcggcaat cccgcccata aacgtgccgc cgataccgat aatgtggatg tgtttcatca
    30241 gagttcccta atcgttcaaa ttctattgtt caacaccgta atggttgatt cggtttcaat
    30301 caatgcggtc tgatgccggc atccgaaccg tctttctgtg cattcccttt cggattttgg
    30361 acggcttcgt ccctcaccgt gtccgaataa tcgccaactc ctgcgtcttc cgccctgtct
    30421 ttcacggcag gcctgaccga actgtacacc cgatcccgcc ccaaacccgc gttggtacaa
    30481 tgttttcccg gagtttggct gtaactggtt ttaccattat ggcggcactc gtaaacattt
    30541 gccgaaaata cggtctgaac cgctgcaaca agcaatatac ttccaatcat tttagatacg
    30601 cgcatattaa actcctttat tgtttctctt caaaaaaagg aatgtatttc aatagaactt
    30661 catctaattc tttcattcct tgctcataat tgaacgggta ttcccaacca tcccctactt
    30721 tgatttcaga aatgtcttta aacttccgct taagggcgga cactttgtcc atatcgtcat
    30781 caatttcctg tttgccgaac ggtattttcc gcttttccaa aacctcgtca taataacaag
    30841 gtaaattcag caatagcccc caagcgctat ttgcgattac gactaatcta tatttttccc
    30901 tagttaagta atctgcaccg ctatcataga ttgcccttgt cggatcataa aaaaattcgc
    30961 aatttttcat agcgtcccca cactttaacc gattcgcaat tttatatccg cgattttgca
    31021 agctgcccat aaaaaccgat tgcctgccaa gccgacacta cttgttaaag atgcccgata
    31081 atgccgcaac tcttccgtat ttaccgacaa acgccctatt tgcttagagc tgttttgttt
    31141 tccacaaaac tttaatccgt tgatttaaca aattttttac caaattcttt atttgttcgg
    31201 attccattag cacgattttg agcaatatct gtcaaaacca tttccaccat atccaaaaca
    31261 aaaccgccgc cgccacggca ttggacgata agatgagttt ccactgcccg tccttccgca
    31321 atgccgcctt cttgggcttc aaagcacccg cataaaaaaa cggtgacagc agcatagaag
    31381 cgatacataa gaaaatcaat acgccgtaat agattttttc agacggcatt tctcttcctc
    31441 aatacgccgc ccgttggcgc atctgttcaa acaggcagat tgtcgccgcc atcgcgacat
    31501 ttaaagactc ggttgcatcg tgcatcggta tcctgacaca cttgtccgcc ctgtctaaaa
    31561 ctgctttacc gacacccgca ccttcgttgc cgaacaccca agctgtcggt tcgcacaaat
    31621 cttcgccgta caaaaccgcc tgcttttcct cgcgcaacgc ggtggcaaac acacggtctt
    31681 catagtgcgc caaccatatt tccaaatccg cctgcgaata aatgtccaac aagaaatgcg
    31741 cgcccatacc cgcgcgtaat accttgggcg accacgcgtc cgcacaaccc ctgcccaaaa
    31801 cgaccgtacc tacccctgcc gccgccgcac tccgtaagac ggtgccgaca ttgcccggat
    31861 cttgcacgcc gtccaaaacc gcacagtcgc ctttgtccgg caaggttccg cccaatggga
    31921 tatcaatcag tgtaagtata tcgtctgcac aactcaagct gctgattttt ttcaatatgc
    31981 cgtctgaaac ggaaaaaatc ccgtcttccg gcaaaaccgc tgtcaattta aggacttctt
    32041 cagacggcat tttagcttcg ggaatatata ccccgaccgg ctttctgccg gattgcagga
    32101 aaacctgaag caggtgcacg ccctccaaaa cggtttgggc atactgccgt ctgaactttc
    32161 cttgcgacaa caggcggtgc aggtgtctga tatgttcatt attggtcgaa ctgatgtgtt
    32221 tcacttcaca agccttttag aaatatgcaa ccggacaata cccgactgaa cgccgccgaa
    32281 atctgtttgc gatattatca aaataaaatg ggaaagtcag gatgtacggg caaaatgccg
    32341 tctgaaaccg agatttgaaa atccgcacaa cagtttgcca acgccaatgg acggtttccg
    32401 ctgtcggcaa cgagcggcca aattgggcgc aggaaaggca gaacccgttt cccctgaagg
    32461 atttttttca catttttatg gatgccgccg acagccaacg tatccgatgc cgctaccgtc
    32521 ctcaaaatcc cgtcctgttc caacatggcc tcaggaagtc cgaacggatg ccgcttcaac
    32581 acaaatctat gttctgtcag tatttttttg agatttccgc ttatcgtccc atctttcaga
    32641 aaagccggtt ttgccaactg ttccgacgca aacacaaaca gcctgcctgc ataatgatgc
    32701 aattcaaagc cttgcaagtt ccaacgtccg gtttttgcct ccgtcaaaac gcgggcaatg
    32761 tcggcaagtg cgttctgatt cggcacgggg atgccgtttt cctttagaaa attccgcaaa
    32821 atatgggttt tccggcgcgg ggaaaacgtc agccaccgcg ccgtatcgaa ataaccggcc
    32881 ccgcaaaccc aacggcagtc ttgaacgacg acctcttcca acaaagccaa atcttcctgc
    32941 aaagcgcgga cattgttcag cacatgccgc ccgaaatggg gaatctgcgc cgaaagttcg
    33001 ggcaaaatac ggtgccggaa gcggtttcgc aaataagccg tatcggtatt gctttcatcc
    33061 tcgatattcg gcaaaccgtg ttttcgggca taatcccata tgtcttggcg cgaaaaaggc
    33121 agcaaaggcc gccagataat gccgttttcc cccaaagggc ggacggcggg catagccgcc
    33181 aaagcgcgca aacctccgcc gcgcgcgact gccagcataa aggtttcgat ttgatcgtcc
    33241 ctgtggtgcg ccaacgccaa aacgtcaaag cctttttcgg caaactcggc ataacgcttt
    33301 tgccttgccg ccgcctcgat gcccaaaccg tttttttcca cgcagacctt aaccgtttcc
    33361 agccccaccc ctagcatatc gcaataattc cggcagaaat ccgcccaatc gtcggctcgg
    33421 ggactcaagc cgtgatggat gtgcaatgcc tccggcacaa atcctgcccg cttcccggca
    33481 caaaccagca gatgcagcaa aacgacggaa tccaagccgc cgcttaatgc cactgctgtt
    33541 ttttttccat tcagaccttg aggaaaacaa tccttcaagc attgctcaaa cgcatctaaa
    33601 gtcagcacgg cttcatcccg ataaagaaaa agcaagcagt ttcagacaaa ctgcttgctg
    33661 cttgttctac ccgaattatt gttccgaaaa tttgccgtaa gccataatgc ggtcgaaacg
    33721 gcgcgaaagc aaatcggcaa gcgggatgct ttgcgcttcg tgcagttgtt tttccaaaac
    33781 ggcttttacg tttttcatgg tttgcccgaa atccctatgc gcaccaccca aaggctcttt
    33841 aatgacggta tcgaccaagt ccagcttttg caggcggtcg gcagtaatac ccaaagcctg
    33901 tgccgcatca gccgcctttt cggcggtttt ccacaaaatc gaagcacagc cttcggggga
    33961 aataacggaa taggtcgaat attgcagcat attgacgtaa tcgcctacgg cgaccgccaa
    34021 cgcaccgccc gaaccgcctt cgccgatgac ggtacacaaa acgggaacgc gcagtcgggt
    34081 cagttcgtac aggtttttgc cgatggcttc cgactgcccg cgttcttccg cgccgatgcc
    34141 gggatacgcg cccggcgtat cgataaaggt catgacgggc aagccgaatt tttccgccgt
    34201 tttcatcagg cgcagggctt tgcggtagcc ttcaggacgg ggcataccga agttgcggcg
    34261 gattttttct ttggtgtcgc gccctttctg atgcccgacg accacaacgc tttgtccgtt
    34321 gaaacgcgcc aatccgccga caatcgcatg atcgtcggca aagtggcggt cgccgtgcag
    34381 ctcttcaaaa tcggtaaaca gcgcgtcaat gtaatccaaa gtatagggac gctgcggatg
    34441 ccgggaaacc tgtgaaattt gagcgggtgt gagtttgctg aaaatcgatt tggtcaaatc
    34501 gttgcttttt ttctgcaaac ggtgtatttc gtccgaaata tcgacggcag actcgtcttg
    34561 gacgaaacgc agctcatcga ttttgttggt cagttcggct atgggttgtt caaaatccaa
    34621 aaaaacaggt ttcataaaat gaagctctca tcaacagatt ctgccgctat catacgctat
    34681 ttgtgcatat tccgcagtta atttattgtc caaaacggct tttccacacc ctctttttgt
    34741 gttcggacag catggaaaac agcggattag tgcatatata ctagttataa ggcgatgtat
    34801 cttatgctaa actcgaaaca aattcaatta tttcaaacaa aatcgtatga aagacaagca
    34861 cgattcttcc gccatgcggc tggacaaatg gctttgggcg gcacgttttt tcaagacccg
    34921 ttcccttgcg caaaagcata tcgaactggg tagggttcaa gtaaacggct cgaaagtcaa
    34981 aaacagtaaa accatagaca tcggcgatat tatcgacctg acgctcaatt cccttcccca
    35041 taaaatcaag gttaaaggtt tgaaccacca acgccgcccg gcacccgagg cgcggcttct
    35101 gtatgaagaa gacgcgaaaa cggcagcatt gagggaagag tgcaaacagc tcgaccaatt
    35161 cagccgcatc acttccgccc atcccgacgg cagaccgacc aagcgcgacc gccgccaact
    35221 ggacaggctg aaaaaaggag actggtaaaa ccattcccgc tgcaaacaga agcacgaacc
    35281 gcgtaccgcc gcatttcaga cggcattcct gaaacttatt ccgcctcgtc tatccatgcc
    35341 tgctgcacgg cttcaaggat gcgttcgccg caacgggcgg gatcgtcgtc aaattcgggc
    35401 aatgccataa tcaggtcgcg cagttgggta aagcgcacgg ttttgggatc gatggcttcg
    35461 ccgtgcaggt cgtagagttc ttcggcgatg cgccgggtat cggtccattt catataaatt
    35521 tccttttatc gtccggcatt gaagccgtgt agaatatgtt tcggcaaaac tgccgcccct
    35581 tgaggatggc tgaatgtttc aactcgccgg acggcacatc aagcaccacc ttatgtgtcg
    35641 tcctgatccg ggaggagtta cccctcccaa acaaatctga ttctaccgcc ctgaagagcg
    35701 gggtttcaac cgataaggaa gattgatgaa caatatgttt gccgcaaaat tgtccgaact
    35761 ggtttatacc gcttccgacc atcccgactc cctgtcggag atggaggagt ttgaccgcct
    35821 gattctgctg atacgcaaac tgtatcaaat attggacggg caacataccc tctacagagt
    35881 aacggtttgc cttaactacc ggagcaggcg cggtctgatt gctttggata aagcggctgt
    35941 cggttgcgat gcggcaatgt tgcgcgcccg gcgttggcgc atctgcatgc agattgcgga
    36001 acgcctttcc gagtcggtcg ggcggcttca cggttgcggc agaaagcgtg tccgccgcct
    36061 gccccgagct tgaaggacgc tatctcgacc ttgtccgccg cgccgccgtc tctttcggtt
    36121 tcgcgcaagg acaggcaaat ccggcaggcg ggcaggaaga aacgcaagcc gccccagatg
    36181 ccgtatcggg tcgttccgtc aaaaaaccga taaaaatcaa tatagaatcg aaagttccgt
    36241 cttcacaaac gtctgttttt cggtaattgc gccttatccg cgcaacaatg ccgtctgaag
    36301 cgtgtcggct tcagacggcc tgttttcagt gttcttcgcg cgcgtggttg atggtgtatt
    36361 tggggatttc cacaatcaaa tcctcgccgg caacaaccgc ctgacaactc aggcgcgaat
    36421 cggcttccaa accccaagcc tgatcgagca ggtcttcttc caattcggcc ggctcttcca
    36481 aactgtcgaa acctttgcgg ataatcacgt ggcaggtggt gcaggcgcag gatttttcgc
    36541 aggcgtgatc gacttcgatg tcgtggtcga gcagcacgtc gaggacggtt ttgccttcgg
    36601 gcgcgttatc gatgactgca ccctcggggc ataatgttgc gtgtggaagt acggtgattt
    36661 tgggcatttt tattgtcttt ctgtaaaaag tatttgtgtc cgtttttagg aaaactgtct
    36721 gcctaatgtc gcggttcgag caggccggca acattttgcc agcccgtcag gcgggcaaaa
    36781 tcgagggcgg tatagccttc cgatgtcttt gaggcaggat ttgcgccgta ttcaagcatg
    36841 gcttgaacca taagtgcatt tcctgccatg gcttcatgat gaagcggcgt atagccgtct
    36901 tcgtcctgct catgcagaaa atccggattt tgggacaact gttgccgaaa atcgtcaata
    36961 cagttccggc acatcggatg ctcttccaga ttttcgggat gttctttttc ttcatacacc
    37021 ggcaatatct gtccgggatc gccgaaatcg attccccagg cggtatcgtg ttcggtacgc
    37081 tcctcttccg tcatctgtcc gcgcattgcc tgtacggtaa agccgccgta ggggatgccg
    37141 ttgcacacga acatccagtc gctgatgtcg ccaaccggaa cgcaaacgct ttcgccttgt
    37201 tcgacattgg tcagtccgcc gggttcattg ttcagcacac cgtaaatata aagaccgtca
    37261 aaataaatat cgtcgatcca catatgttcg caaatttcgc cgtcttcgcc gtcttggaaa
    37321 aaagggactt tgaccatggc aaaatccaag gcggaaataa tgcggcggcg ttcccaaaaa
    37381 agctcgcgcc aaaagtattt gaatgtttta cgggcgcgtt cgccggcacg gtttaccggt
    37441 tcgtctgcct gttctacata ataaatgacg gaatcgccca tcatactgct cctcaacgtg
    37501 tacggtatct gtttgcacct taccgcggtt ttctacctcc ggcatccgat tcggatttga
    37561 aaagttccaa atattcggaa taggcttttt ccaaatccgc ccgcgaaaaa caggtgtaaa
    37621 tatggatgcc gtctgcaatt tcgtcggtca gcctcgtgcc gcttttgccg aaatatgctt
    37681 ctttaaaaag gcggattttc gattttttcg gcttgtagga tgccgcgtcc gccaaaagcc
    37741 ggggcagcgc gtaagggtat tcccggtgtc cgcgccgtac caaatcaagc agttgtttgc
    37801 ggccggaccc ggcattccct tcctgccggc gttcgtggac gcttttttca aattccgatt
    37861 ccgccgtttc gtttttcggg aacacgattt cgccgcgaag cgataaaaac aaacgtttca
    37921 caaggttttc gtccacggcg aacaattcgg tatcgcctat cctgcttttg ctgaaaattt
    37981 catggagcag gttttttttc tttgtaattg tcggttttga cggcgaggag gcgttccaac
    38041 ccggcaacgt tcgcatagcc gttgttttcc aaatggcgca ttctgccttc aaaattgctt
    38101 acgtccgaaa tgccgatttt atatagtgaa ttaacaaaaa tcaggacaag gcggcgagcc
    38161 gcagacagta caaatagtac ggcaaggcga gccaacgccg taccggttta aatttaattc
    38221 actatacacg cccttgatga cggttttcat cgaatagaca atgcctgact tttccatatc
    38281 gatgtttttc aagtgttttc gatccttcag acggcatcag gttatatcta tgccgtctga
    38341 aaccgtttaa gtatcaaata ttatcgacac tctgacctgt cagcgcacgt tggatgttgc
    38401 ggttcatgcg cttggcggcg aaattgtcgg tgctgcggct gagtttggcg acagctgcac
    38461 ggatgtcttc agctttaccg tctttcagac ggccttgcaa atcggcgatg tctcgctgga
    38521 tttgtgcaaa ctcttcggca tccagcaaat cgctgtccaa ctcgagggcg gcgttgacgg
    38581 catcggtcag gctttcggct tcgaccacgg cttcggcgcg ggcgcgggcc gccatatctt
    38641 cggcggcgtt gcccatgctg tctttgagca tttgggtgat ggtgtcatcg tccaaaccgt
    38701 aggagggttt gacttcgatt tgcgcctgta cgccggtgct ttgttcttgg gcggaaacgg
    38761 acagcaaacc gtcggcatcg atttggaagg taacgcggat acgcgccgca cccgccgcca
    38821 taggcggaat gccgcgcagg gtaaatttgg caaggctacg gcagtcggaa acgagctcgc
    38881 gctcgccttg cacgacgtgt atcgtcatcg cggtctgacc gtctttgaag gtggtaaagt
    38941 cctgcgcgcg cgcggtgggg atggtggaat tgcgcgggat gattttttcc gccaagccgc
    39001 cgtaggtttc caaaccgagc gacaaggggg taacgtccaa cagcagccat tcgccgtcgg
    39061 ctttgttgcc tgcgaggacg tttgcctgta tggctgcgcc gagcgcgacg acttcgtcgg
    39121 gattgaggtt gttcagcggg gtttgtccga aaaaggtggc gactgcctgt tggacgtgcg
    39181 gcatacgggt cgaaccgccg accataacca cgcctttgac ttcgttttta ccgacaccgg
    39241 catctttcaa cgcctgtttg accggctcga gcgttttcat caccaaatgc tgcgtcaggt
    39301 tgtggaactc ggcgcgactg atgcttgtgt cgattgccat accgtctgaa aacgtcgcct
    39361 gaatgcgcgc ttcggtttgc gtggtcaatt gttctttggc ggcgcggacg agcgagagca
    39421 ggagttggct gtcttgttcg ttgagttggg agagtctgtt ttgttcgagc aggtagcaga
    39481 acaaacgatg gtcgaagtca tcgccgccca acgcgctgtt gccgccggtg gctttgactt
    39541 caaacagtcc tttggtcagt tgcaacacgg atacgtcgaa tgtgccgccg cccaaatcgt
    39601 acacgacaaa cgtgccttcc gaggcgttgt ccagcccgta ggcgattgcg gcggcggtag
    39661 gttcgttgag caggcgcaat acgttcaaac cggccagacg cgcggcatct ttggtggcct
    39721 ggcgttgcgc gtcgtcgaaa taggcgggga cggtaatcac cacgccgacc aaatcgccgc
    39781 ccaaggtttc ttcggcacgc aatttgaggg ttttgaggat ttccgccgac acttcgacag
    39841 gcgttttcac cccctgccgc gtatgcagtt cgataaagcg ttgattgtcg ccgaaacggt
    39901 aaggcaggta atgcgtattt tgatgcagat cggcaagagt ccgcccgata aggcgtttgg
    39961 cggagctgac ggtgttcagc gggtcggttt tttgggcgga cagggcggtt ttgccgactt
    40021 caatgccgcc gttttccaga tagcggacga cggaaggcag ggtaacgcgc ccgtcggcat
    40081 cgggcaggca ggcggcactg ccgctgcgga cggtggcgac caagctgttg gtcgtaccca
    40141 aatcgatgcc tgccgccaaa cggtgccggt gcggggcggc ggacataccc ggttctgaaa
    40201 tctgcaaaag agccataaat tctgcctgtc ggtgcggtgt gtaaaggaag gaaggcggca
    40261 ttttaacaga atttgcgccg atagttgagc aaaccgctaa ggattgggcc gtgccgccga
    40321 aattgccctc taccgccaaa taccgataaa atccgccttt cccgcccatc attaggaata
    40381 taaatcgtga aaggactcga ctattgccgc caaaaagcag aggaaagccg ctccagtttt
    40441 ttgtcgggct tccgtttcct gactcaggaa aaacaggatg cggtaacggt tctgtatgcc
    40501 ttttgccgcg aattggacga tgtggttgac gaatgttcca accccgatgt tgcacaggca
    40561 acattgaact ggtggcgcgg cgatttggac aatgcgttcg gcggcgcgat gccggaacac
    40621 cccgtcaatc aggccttgcg gcaggttaag gaaaccttca agctgccgaa atatgaactg
    40681 gaagccttaa tcgacgggat gcagatggat ttggttcagg cgcgttacgg cagttttgag
    40741 gaattgaaac tgtattgccg ccgcgtcgcg ggcgtggtcg gctgcctgat tgcgcggatt
    40801 ttggggtttt cagacggcaa aacgctggaa tacgcggata aaatgggtct tgcgctgcaa
    40861 ctgaccaaca tcatccgcga tgtcggcgaa gatgcgcgca ggggacggat ttacctgccg
    40921 atggaggaaa tgcagcggtt tgacgtaccc gcaagcgtga ttttgcaatg cagcccgacg
    40981 ggcaattttg ccgaattgat ggcgttccaa atcaaacgcg cccgtgaaac ctaccgcgaa
    41041 gccgtatcgc tgctgcctga tgccgataaa aaagcccaaa aagtcggact ggttatggcg
    41101 gcggtttatt acgcgctgtt gaacgaaatc gaccgagacg gcgcgcaaaa cgtcctcaaa
    41161 tacaaaatcg ccctcccttc gccgcgcaaa aaacgcattg ccctgaaaac ctggttattc
    41221 ggattcaaac cgcgccccgg cacgccggaa cgggcataag gcgcatactg cccttcagga
    41281 aaacccaacc ctcgccgccc cgaaaaacgg ggtttcaacc attggaggaa taaatgatga
    41341 acacgccgca tccgcgcccg aaaatcgccg tcatcggcgc aggctgggcc ggcttgtccg
    41401 ccgccgtcac cttggcgcgg cacgccgacg ttaccctgtt tgaagccggc cggcaggcgg
    41461 gcggaagggc gcgcacactg gccggaaata ccgacggttt cggttttttg gacaacgggc
    41521 agcacatttt gctcggcgca taccggggcg tgttgcgcct gatgaaaacc atcggttcag
    41581 acccccgtgc cgcctttttg cgcgtaccgc tgcactggca tatgcacggc ggtttgcagt
    41641 tccgcgccct ccccctgccc gcgccgctgc atattttggg cggcgtgctg cttgcccggc
    41701 gcgtaccgtc cgcattcaaa gccaaactgc ttgccgatat gtccgatttg cagaagtccg
    41761 cacgcctcgg acagcccgac acgacagttg cacaatggct gaaacagcgg aacgtgccgc
    41821 gtgccgccgt aatgcagttt tggcagccct tggtctgggg cgcgctcaac acgcctttgg
    41881 aaaccgcaag cctgcgcgtg ttgtgcaacg ttttgtccga cggcgtgctg acgaaaaaat
    41941 ccggcagcga ctatctccta cccaaacagg atttgggcgc aatcgtcgcc gaacccgcct
    42001 tggcggagct tcaacggctc ggcgcggaca tccgcctcga aacgcgcgta tgccgtctga
    42061 acaccctccc ggacggaaaa gtcctcgtca acggcgaagc cttcgatgcc gccatacttg
    42121 ccaccgcgcc ctaccacgcc gccgcgctcc tgcccgaagg cacgcccgaa cacgttcaga
    42181 cggcatatca aaaccttcgc taccacgcca tcaccaccgt ctatctgcgc tacgccgaac
    42241 ccgtccgcct gcccgccccg ctgaccggca ttgccgacgg cacggcacaa tggctgcttt
    42301 gccggggcag gctcggactg cccgaaaacg aagtctccgc cgtcattagc gtttccgacc
    42361 gcgtcggcgc gtttgcaaac cgggcgtggg cggacaaagc ccacgccgac ctcaaacgca
    42421 tccttccgca tttgggcgaa cccgaagccg tgcgcgtcat caccgaaaaa cgcgccacaa
    42481 ccgcaaccga tgccccgccg ccggatttgt cgtggctgca ccggcaccgt atcttccccg
    42541 ccggcgacta cctccacccg cactaccccg ccacgctcga agccgccgta caatcaggtt
    42601 tcgcgtcggc ggaagcctgc ctgcaaagcc tgaacgatgc cgtctgaaaa cgccggccgg
    42661 catcgggacg ctttacaagg tgcggcaaaa cgctaaaata cattaaccgt caaacccaaa
    42721 ggacaaccat gccgacactg accgacaaaa ccatcttagt taccggcgca tcgcaaggct
    42781 tgggcgaaca ggtcgccaaa gcctacgccg ccgaaggggc gaccgtaatt ctggtggcac
    42841 gccatcagaa aaaactggaa aaagcctatg acgcgattgt cgaagccgga caccccgaac
    42901 ccttcgccat ccgtttcgac ctgatgagtg cggaagaaaa agaattcgaa cggtttgccg
    42961 ccaccattgc cgaagccacg caaggcaaac tggacggcat cgtccactgc gccggctatt
    43021 tttacgccct ctcgccgctg gatttccaaa ccgtcgccga atgggtcaac caataccgca
    43081 tcaacaccgt cgccccgatg gggctgaccc gcgccctgtt cccgctgctg aagcagtcgc
    43141 ccgacgcgtc cgtcatcttc gtcggcgaaa gccacggcga aacacccaaa gcctactggg
    43201 gcggcttcgg cgcgtccaaa gccgcgttga actacctgtg caaagtcgcc gccgacgaat
    43261 gggaacgctt cggcaacctg cgcgccaacg tcctcgtccc cggccccatc aattccccgc
    43321 aacgcatcaa atcccatccg ggcgaagccg gaagcgaacg caaaagctac ggggacgtac
    43381 tgcccgcatt tgtctggtgg gcaagtgccg aaagcaaagg gcggagcggc gaaatcgttt
    43441 acctctaaat ccggaaaagg caggcatccc gcccgcgccg cgcttccgtt ttgaaaaata
    43501 tccgtacctt ccgcgcgcat ccgtcccgca cagacaaaca ccttgactta aatttacata
    43561 aggacaataa tgataacccg ttatttccct aactggacct tagggtaaat tttatgaaaa
    43621 ccgtttccgc cgccatcgct tttgccgccg ctgccgtttc actgaccggc tgtgcgaccg
    43681 agtcctcacg cagcctcgag gttgcaaaag tcgcctcctg caatacgcaa tatcacggtg
    43741 ttcgcacccc gatttccgtc ggaacattcg acaaccgctc cagcttccaa aaaggcattt
    43801 tctccgacag tgaagaccgt ctgggcagcc aggcaaaaac catcctggta acacacctgc
    43861 aacaaaccaa ccgcttcaac gtactgaacc gcaccaacct tagcgcattg aaacaggaat
    43921 ccggcatttc cggcaaagcg cagaacctga aaggcgcaga ttatgtcgtt accggcgatg
    43981 taaccgaatt cggacgcaga gatgtcggcg atcatcagct cttcggcatt ttgggtcgcg
    44041 gcaaatcgca aatcgcctat gcaaaagtgg ctctgaatat cgtcaacgtc aatacttccg
    44101 aaatcgtcta ttccacacag ggcgcgggcg aatacgcact ttccaaccgc gaaatcatcg
    44161 gtttcggcgg cacttccggc tacgatgcga ctttgaacgg caaagtttta gacttggcaa
    44221 tccgcgaagc cgtcgacaac ttggttcagg ctgtcgacaa cggcgcatgg caatccaacc
    44281 gttaaggaga aatgatgaat ccgaaaacct tgggccgttt gtcgctgtgt gcggcggtct
    44341 tggctctgac cgcctgccgg cggcgggcat aaaaacctgt attattacgg cggttatccc
    44401 gataccgtct atgaaggttt gaaaaacgac gacacttcgt tgggcaagca gaccgaaaag
    44461 atggaaaaat actttgcgga agccgccaac aaaaaaaatg aatgccgccc cgggtgcgca
    44521 cgcccatttg ggactgctgc tttcccgttc gggagacaaa gagggcgcgt tccgccaatt
    44581 tgaagaagag aaaaggctgt ttcccgaatc gggcgtattt atggacttcc tgatgaaaac
    44641 cggtaaagga ggcaagcgat gaaacctttg attttagggc ttgccgccgt gttggctctg
    44701 tctgcctgcc aagttcgaaa agctcccgac ctcgactaca cgtcattcaa agaaagcaaa
    44761 ccggcttcaa ttttggtggt tccgccgctg aacgagtcgc ctgatgtcaa cggcacttgg
    44821 gggatgctgg cttcgaccgc cgcgccgatt tccgaagccg gctattacgt cttccccgcc
    44881 gcagtcgtgg aggaaacctt caaagaaaac ggcttgacca atgccgccga tattcacgcc
    44941 gtccggccgg aaaaactgca tcaaattttc ggcaatgatg cggttttgta cattacggtt
    45001 accgaatacg gcacttcata tcaaatttta gacagcgtga cgaccgtatc cgccaaagca
    45061 cggctggtcg attcccgcaa cgggaaagag ttgtggtcgg gttcggccag catccgcgaa
    45121 ggcagcaaca acagcaacag cggcctgttg ggggctttgg tcggcgcagt ggtcaatcag
    45181 attgccaaca gcctgaccga ccgcggttat caggtttcca aaaccgccgc atacaaccta
    45241 ctgtcgccct attcccgcaa cggtatcttg aaaggtccga gattcgtcga agagcagccc
    45301 aaataagcat atgccgtctg aacctctccg agcttcagac ggcatatgcg aatcttgata
    45361 cttgcaagcc gcaccgccca aaatcaggcg accggtttca atatccgaac aaggttcggg
    45421 ttctgtattt tgcagaaccc gaacctttta ttcaaattta aacttaattc cggcgtggtt
    45481 gtatggtaaa ttatagtgga ttaaatttaa accagtacgg cgttgcctcg ccttgccgta
    45541 ctatctgtac tgtctgcggc ttcgccgcct tgtcctgatt tttgttaatc cactataaca
    45601 agcaatatgc cctgaccggc aaaacttccc caaacttcat caaaaaatca actgtacccg
    45661 tctttttcag acggcattga taccgtaaga gatttcccat gcaaaaccgg caaaccgagc
    45721 tttattccac gccgtcttgg ctgttgcaga ccttattgat gattaccgcc gcctcggcgg
    45781 tgattctgtt tttcgcgcgc aacacgcgct tggggcggga gtttgcctat atcctgcgcc
    45841 tttgcctgac accgaaaagc acggtcaaag tattgctgct gattacggca atggttacgc
    45901 tgctgttaac cgaagtgcgg ttgaatgtgt tgagtacctt catgtccaaa ggactttacg
    45961 attcgatgca ggatttgaat gcttcggcat tttggatgtt tgcagcgatg aacgccggcg
    46021 tggtactgat acgggcgttt aacaacgtcg ttaacgactt tctcgattaa ggcttggcga
    46081 ttaaatggtc ggaacggctc aatgaagttt tgacttcgcg ctggcttgcc gacaaaaact
    46141 actaccgcct gcaaatgcgc cgccacgcgc cggacaacat cgaccagcgt atccaacagg
    46201 atgcgcagga attcatcgct tcgaccatcg aatttgtgcg cggcatggtc aattcggtcg
    46261 ttacttctct ggaatttgcc gttgttttgt ggggcttggc aggcatcctg accgtgttcg
    46321 gcttcgacat tccgcacggc attgtttggt ttgtctttat tttcatgatt ttggcgatct
    46381 ttatcgccat gtggataggc aaccctttga ttcgttacaa ttatgaaaac aaaaaactca
    46441 acggcgacta ccgttattcc ctcatcctcg tacgcgacca cgccgaaagc gtggcgtttt
    46501 acagcggcga acaacacgaa cacggccggc tttccgaccg ctttaaagcc attatccgca
    46561 accgttggcg catcgcgcgg caaagcgtct gcttaagcgg ctttaacgat atgttcacca
    46621 acggcatcaa actcttcctg attattttgc aagctccgcg cctgtttgcc ggacaaatca
    46681 aaatcggcga catccagcag accgtccaag ccttcgcgcg actgcaaaac gcgctgtctt
    46741 tcttccgaat gttctacaac aaattcaccg cctgccacgc ccgactggag cgtctgtacg
    46801 tctttttgct gagtaccgaa gaacaacacg gcgcgcagca acccgagatt agcgaagttt
    46861 cagacggcat tgcactggaa aacgtcgccc tgttccgcca caacggcgaa gttttattgg
    46921 acggcatcaa catcaaactc aaaagcggcg attccctgct gatacgcggc ccgagcggtt
    46981 taggcaaaac ctcgctgctg cgcgcgctgg cggggctttg gccgttcggc agcagcggca
    47041 aagtcagccg tccgccgcat caaggcatcc tcttcctgcc gcaacgcccg tacacggcac
    47101 aaggcagcct gcgcgacgcg gtttgttacc ccgatatcga caaacagcat cccgagttag
    47161 ccgaagccat gaacacctgc cgcttgggtt atctgattga caaattggat aaaacagacg
    47221 gctggcagca caaactctcc cccggcgaac tgcaacgcgt cgccttcgtc cgcgccctgc
    47281 tctccaagcc caaaatcgtc ctgctcgacg aagccgccgc cgccttggac gaaccggccg
    47341 aagcctagct ctaccgcgcc ttaaagcaaa aactgcccga cagcatcatc agtatcggac
    47401 accgaagtac gctcaacgcg ttccgcaata tgcacctcga tgtcggcaac gctgcctgcg
    47461 gctgaacgat gccgtctgaa gccgttttca gacggcatcg ttcaaattgg aaagacacgc
    47521 gaaaacaacg tacaataaac ccgattccaa cccatccggt atgcctttgt gaaccagctt
    47581 attttcgact ttgccgcaca cgactatccg agtttcgaca aattcctcgg cacggaaaat
    47641 gccgaactgg tctatgtgtt acagcataaa cacgacccgt ttatctacgt ctggggcgaa
    47701 gaaggcgcgg gcaaaagcca tctgttgcag gcgtgggtcg cacaggcgct cgaagccggc
    47761 aaaaacgccg cctatatcga tgccgcctcc atgccgctga ccgatgccgc gtttgaggca
    47821 gaatacctcg ccgtcgatca agtcgaaaaa ctgggcaacg aagaacaagc cctgcttttt
    47881 tccatcttca accgcttccg caacaacggc aaaggctttt tgctgctcgg ttcggaatac
    47941 acgccccagc agctcgtcat ccgcgaagat ttgcggacgc gtatggcata ctgcctcgtt
    48001 tacgaagtca agcccctaac cgaccaagaa aaaatcgacg cgctcgccaa tatggcggcg
    48061 gcacgccaag taaccgtcga ttccgaaatt ttcgaatacc tgctcaaaca ctggcggcgc
    48121 gatatggaca gcctgatgat gatgctcgac acgctggaca actacgccgt aaccatgggc
    48181 aaacgcatca ccctgccgct gcttcgccag cttttgaaac aacaggaaac ccaatgaaaa
    48241 acctcgccat cttcgacctc gacaacaccc tcatcaacac cgattccgac cacgcctggc
    48301 cgcaatacct catcaaaaaa gggttggttg acgctgccga aaccgaagcg caaaacgaaa
    48361 aattctaccg cgactaccaa aacggctgcc tcgacatcga cgcattcctc aaactccacc
    48421 tcgccccgct cgcccgttac agcaaagaag agctggcgga gtttcaccgc gaatttatgg
    48481 cggaatacat catcccccac atctcgccta tgcagcgtat gctggtgcag agccaccaaa
    48541 tggcaggcga cgaaaccctc gtgatttcct caaccaacga gttcatcatc acccccgtct
    48601 gccgcctttt cggcatcgcc aacatgatcg gcacacaact cgaaaccggt cccgacggcc
    48661 gctacaccgg caattacatc ggcacgccca gcctcaaaga aggcaaaatc acccgtctga
    48721 accaatggct cgccgaacgc ggcgaaacgc tcgaaagcta cggcaaaacc tatttttaca
    48781 gcgactccaa aaacgacctg ccgctgctgc gcctcgtcag cgaacccgtc gccgtcaacc
    48841 ccgatgccga actggaaaaa gaagccaaag aaaaaggctg gccggttttg aatttcaaat
    48901 gacgcaatgc cgtctgaagc ccgattcggc gttcagacgg cattgaggct gaaatcccaa
    48961 aaacccaaag ccacaggaat ttatcgggaa aaacaacaat ctttccaccg tcattcccac
    49021 gaaagtggga atcttgatcc gtccgcacgg aaacttatat ttcgtcattc caccaatccc
    49081 acaccaccct taccggttca aatccgcaca aaaatccaca tcccgtcatt cccacgaaag
    49141 tgggaatcta ggacgtaaaa tctaaagaaa ccttttttcc cgataagttt ccgtgccgac
    49201 aggtctggat tcccgcctgc gcgggaatga cgaaatttca aagttatggc gttatcggaa
    49261 aaacagaaaa tcaaagccgg agaatttatc caaaacaacc ggatttcaaa aaaaccaaat
    49321 tcccggcggg aatgacggat tttaggtttc tgttgtggtt tctgttttct cgggaataac
    49381 aacttagaaa ttgcccgaaa cccaaaaagc agaaaccggc ttcccgccaa agccggcatt
    49441 ttccgacttt gcttcaggca tcttcccctc tgcctaaaat catcgacccg ataccggcat
    49501 cggtaaagat ttccagcaaa agcgcgttgg gcaacctgcc gtcgatgatg tgcgtggctt
    49561 tcacaccgtt ggcggcggct tcgaccgcag aagcgatttt cggcagcata ccgccataca
    49621 gcgtgccgtc ggcaatcagc ccatcaatcc gtttcggcgt gagtttggtc agcagattgc
    49681 ccgttttgtc catcacaccg gcgatattcg tcatcatcaa gagtttttcg gcgttcaatt
    49741 cttccgccaa tttgcctgcc accaaatcgg cgttgatgtt gaacgcttcg cctttttcac
    49801 ctacgccgac gggggcgacg acgggaatgc agccgcgttc tatcagccct ttaaccaaac
    49861 cggtatcgat gctttccacc gtaccgacct gtccgatgtc cacgctattc tgttcgggcg
    49921 tatcgaccaa aagtttcttc gccttaatga aatggtcgtc gcgcccgctc acgccgaccg
    49981 cgtgccctcc atatgtgtta atcatcgaca cgatttcctt gttgacgtgc ccgcccaata
    50041 ccatttcgac aatatccatc gtctctttgt cggtaacgcg cattccttgg acaaattcgc
    50101 cctttttgcc gactttttca agcatcgcat tgatctgcgg cccgccgccg tgaacgatga
    50161 cgggatgaat gccgaccagc ttcagcagca cgacatcgcg ggcaaaccct tctttcaagg
    50221 caggttcggt catcgcgttg ccgccatact tgatgacggc gaccgaaccg gaaaaccggc
    50281 ggatgtaagg cagtgcttcg gcaaggatac gcgccttgtc ggcggcggaa ataatgtttt
    50341 caaactccat aacggctcca tattgttgac aatttcggct tatgttaacg ccaaacgccg
    50401 tctgaaacaa tcttcagacg gcgtttggca caccttcggg caggttgaag ccttgcgata
    50461 cgggcggtaa aatcgcggtt tatccggttc gagaaaccgg cgacagcaag gactttccca
    50521 tgattaaaat cagcacccgc ttcgatgccg gctcggtcgt cgtcaaagac ctgaccgacc
    50581 cttccaacat ccgcctcgcc ctgcgtcccg acaacgcctc cgatttcgca caatggttct
    50641 acttccggct gcaaggcgcg gcctatcaaa actgcatcat gcattttgaa aacgcggcag
    50701 aagccgccta cccgaaaggc tgggaaggct atcaggcgtg tgcctcatac gaccgccgca
    50761 actggttccg cgtaccgact tcctacgaaa acggcgtact gaccgtcaat catacgccgc
    50821 tgtccaacag cgtgtattac gcctatttcg aaccctattc cgaagagcag cacctcaacc
    50881 tcctcggcga cgcgcaaggc agcggcctgt gccgcatcga cgacttgggc agcaccgtgc
    50941 aaggccgcga catcaatctg ctgaccatag gcaaccaagt cgaaagcgac atgaaaatct
    51001 ggattaccgc ccgccagcac ccgggagaaa ccatggcgga atggtttgtc gaagggctgc
    51061 tcggcaggct gctcgattcg caagacccga cagcacgcac cctgctcgac cgcgccacgt
    51121 tctacatcgt ccccaatatg aatcccgacg gttcggcact gggcaacctt cgtaccaacg
    51181 ccgccggtgc gaacctcaac cgcgaatggg aaaacccgac tttggaaaaa agccccgaag
    51241 tgttcttcgt gcgcggaaaa atgctggaaa ccggcgtgga tttgtttttg gacatccacg
    51301 gcgatgaagg tctgcccttt gtctttgttg caggaacgga aggtgtgccg aactacaatc
    51361 cgcgcatttc cgcgttggaa gcgcagttca aaaccgccct tttgaacgcc agccccgatt
    51421 tccaagacga atacggttac gaaaaagacg cgccgggcaa agcgaatatg accttggcga
    51481 ccaactgggt cggcaaccgt ttccactgcc ttgcctacac gctggaaatg ccgttcaaag
    51541 acaacgccaa cctgcccgac gacgacttcg gctggaacgg ccagcgttct ttgcggcttg
    51601 gggaagcggt gctttccgcc attttgaacg tcgccggcga tttgcgctga cactccccac
    51661 tgaaaatgcc gtctgcaagc ccttttgcgt ctttcagacg gcatttgaaa acgaaagccc
    51721 gttatgatta tccattacca attcgatccc gtcctcatcg gtatcggccc gcttgccgtc
    51781 cgctggtatg ccttaagcta catcctcgga tttattcttt ttacctttct cggcagaagg
    51841 cgcatcgcgc aaggcttgtc cgtttttacc aaagaatcgc tcgacgactt cctgacatgg
    51901 ggcattttgg gcgtgatttt gggcggacgc ttgggctatg tcctgtttta caaattctcc
    51961 gactacctcg cccatccgct tgatattttc aaggtatggg aaggcggaat gtcgttccac
    52021 ggcggctttt tgggtgtagt tattgccata tggttgttca gccgcaagca cggcatcggc
    52081 ttcctcaaac tgatggacac ggtcgcgccg ctcgttccgc tgggtctcgc ttcgggacgt
    52141 atcggcaact ttatcaacgg cgaactttgg ggacgcatta ccgacattaa cgcattttgg
    52201 gcaatgggct tcccgcaagc gcattacgaa gatgccgaag ccgccgcgca caatccgctt
    52261 tgggcagaat ggctgcaaca atacggtatg ctgccgcgtc atccctcgca gctttatcag
    52321 tttgcccttg aaggcatctg cctgttcgcc gtcgtttggc tgttttccaa aaaaccgcgc
    52381 ccgaccgggc agactgccgc gctttttctc ggcggctacg gcgtgttccg ctttattgcc
    52441 gaatttgcgc gccaacccga cgactatctc gggctgctga ccttggggct gtcgatgggg
    52501 caatggttga gcgtcccgat gattgttttg ggtatcgtcg gctttgtccg gttcggcatg
    52561 aaaaaacagc actgaccgcc tgtgaaaaat accgtctgaa acatggaaat ccggtttcag
    52621 acggcatttt tacgtttggt tcagatgaaa acaaacgctt caattcttac cgcaacacgc
    52681 cttgtatttc ctgccgctgc cgcacggaca gggatcgttc ctgccggttt tttccccttc
    52741 cctgcggacg gtttgcggtt tgttgatgac cgcctgccag tagcggtaga tgtctgccag
    52801 cgcgtaaggc agttcggacg caagttccgc cagctcgcct tcggtgaatt gcaggcggat
    52861 agcgccgttt tcctcttcgt cgtaaatgcc gcccaatgcc atcacggggt aaaacagctc
    52921 ttcaaacgct tcatcatcgg cggcttcaaa ccaatcggtc ggcacaatgt ccaaaccgta
    52981 aagataggcg ttgcaccaag tgtaaaaatc gctgccgccc tcgccgtcgt cgtagagcca
    53041 caaatcgggc agctttttat ccgacatcgc ggcggttgtt tccatcgcca ttgccaaaac
    53101 cagccgttcg atttcggaac gttcggcggc ggtaaattgc gattcgtcgc ccaacacttc
    53161 gggcagccag tcgagcggtg ccaatttgtc cggcccgctc aacagcgccg tcataaaacc
    53221 ttgaacctcg tcgcaacgca tcgtgttgcc ttgttcgctt ttggcatcca acaattcgcc
    53281 caaccgccgt ttggatgctt cggtaaattt tcgggaatcc atcattttcc ttttcaaatg
    53341 ggttttgcgc cctattatag tggattaaat ttaaatcagg acaaggcggc gagccgcaga
    53401 cagtacaaat agtacggcaa ggcgaggcaa cgccgtaccg gtttaaattt aatccactat
    53461 atcgccgcaa tgccgtctga agccttttta tgcttcagac ggcatcgtct gttttcacgc
    53521 tcaaatcgta ccgctgccct gcgccttcgg tttggcggca ctaaattcca gcttgctcaa
    53581 agcggaaagg taagctttgg cggtcgccgc caaaatgtcg gtatccgcgc cctgaccgtt
    53641 gacgacgcgg ttgccgcgcg ccaaacggac gctggtttcg ccttggcttt ccgtaccttg
    53701 cgtgacggcg ttgacggaat aaatctgcaa agtcgcgccg ctttgcgcca cgctctcaat
    53761 cgctttgaaa attgcatcaa cagggccgga gccggttgcg gaagcgcgtt tttcttcgcc
    53821 tttgatgccg aacacgatgt cggcgcgcgg ctcttcgccg gtttcggtgc tgattttttg
    53881 agaaatgaat ttatagcttt cggcattcat attgcccatt tcgtccgaca ccagcgcgtg
    53941 caggtcttca tcgaagattt cgcgtttttt gtcggcgagt tctttgaagc gtgcaaatgc
    54001 cgcgttcagt gcctcttcgc tttccaactc gatgcccaaa tccgccagct tggttttgaa
    54061 ggcgttgcgg ccggacaatt tgcccaagct caatcggttt gccgaccaac cgaccgattc
    54121 ggcagacata atctcgtaag tttcgcggtg tttcagcacc ccgtcctgat ggatgcccga
    54181 ttcgtgcgaa aaggcattcg cgccgacaat ggctttattg ggctgcacgg gatagcccgt
    54241 aatggtggac accagtttgg acgaaggcac gatttgcgtg gtatcgatgc cggtttccaa
    54301 gccgaacaag tcgtggcgca ccttcaacgc catcacgatt tcttcaaccg aagcattccc
    54361 cgcgcgttcg cccaaaccgt taacggtaca ttccacctga cgcgcgccgc cttttaatgc
    54421 ggcaagcgaa ttggcaaccg ccaagcccaa atcgttgtgg cagtgtgccg accagacgac
    54481 tttgccgccg ttgggcgttt tggcaatcag ttcgcggaaa aattcttcgg ttttgtacgg
    54541 gatggaatag ccgacggtat cgggaatatt gatggtggtc gcgcccgctt caatcaccgc
    54601 gccgcagatt tcggcaagga aatcgatttg cgaacgcaac gcgtcttcgc aggaaaattc
    54661 cacatcgtcg gtgtattcac gagcgatttt taccgctttg accgccgcct caatcacctg
    54721 cttcggcttc atcttcagct tgtactccat atggatgggg ctggtggcga tgaaggtgtg
    54781 gatgcgtttt ttcggcgcgg gcgcaacggc cttacccgcc tgacggatgt cccgctcgat
    54841 ggcgcgggac aatgaacaga ccgttgattt ggtaatggtt ttcgcaatcg cattgaccgc
    54901 ctcgaaatcg cccgggctgg cggcggcaaa acccgcttcg atgatgtccg cgcccaattt
    54961 ttccaactgg cgggcgacgc ggattttttc ctctttggtc atagcggcgc cgggcgattg
    55021 ttcgccgtcg cgcagggtgg tgtcgaaaat aataacgcgg ttggcctgtg tcatttctgt
    55081 tctctccaga gattcgtttt tttgtaaaaa agcattcaaa tccagcggtc ttccttgcga
    55141 ttcggcaagc gcggtcaatt tttgcagttg cgtcaaaggc agcgagccgc gtgtgcgcca
    55201 tttgtagatg gcggcggtcg tcgcggcatt ttcaggatcg tgccgtttca acgcttcggc
    55261 aagcgcgttc acgccgccga aataggcgac cagacggtct atatctaatt gcatggtagt
    55321 ccttgtctaa aataaatcag cccgcagcag aaatatggac aggattatac gcattttgga
    55381 caaaacggta atattaattt gaaaaaatct caataagttg ctataaattt tattaatttt
    55441 atacattttg tctattttat tgcagatgcg gcgtgattgt tgacaattgc gacagaacag
    55501 ggcaaattcg gcggtacaag gcggcaacga gacaggacaa accaacaagg acggaaacaa
    55561 tgaaatacaa aagaatcgta tttaaagtcg gcacatcttc gattacccgt tcggacggca
    55621 gcctctcgcg cggcaaaatc caaaccatca cccgccagct tgccgcattg catcatgcgg
    55681 gacacgagct ggtcttggtg tcttccggcg cggttgctgc agggttcggc gcgctgggtt
    55741 tcaaaaaacg tccggtcaaa atcgccgaca aacaggcttc cgccgccgtc gggcaggggc
    55801 tgctgatgga agaatatacg gcaaacctgt cttcagacgg catcgtgtcc gcacaaatcc
    55861 tgctcagccg tgccgacttt gccgacaaac gccgctacca aaatgccggc ggcgcacttt
    55921 ccgtgctgct gcaacgccgc gcgattccca tcatcaatga aaacgacacg gtttcggttg
    55981 aggagttgaa aatcggcgac aacgacacat tgagtgcgca agtggcggcg atgatacagg
    56041 cagacctctt ggtgctgctg accgacatag acggtcttta caccggcaac ccgaacagca
    56101 atcccgatgc cgtacggctg gacaaaatcg aacacatcaa ccatgaaatc atcgaaatgg
    56161 cgggcggctc gggttcggca aacggcacgg gcggtatgct gaccaaaatc aaagcggcaa
    56221 ccatcgccgc cgaatccggc gtaccggtgt atatctgttc ctcactcaaa cccgattcat
    56281 tggccgaagc cgccgaacat caggcggacg gctcgttttt cgtcccccgt gccaaaggtt
    56341 tgcggacaca gaagcaatgg ctggcgttct attccgaaag ccggggcagc gtttatgtgg
    56401 acgaaggtgc ggaacacgct ttgtccgaac aagggaaaag cctgctgatg tcgggcattg
    56461 ccggaatcga agggcatttt tcccgtatgg acaccgtaac cgtgtacagc aaggcaacca
    56521 aacagcccct gggcaaaggg cgcgtccttt tcggctccgc cgccgccgaa gacctgctca
    56581 aatcgcgtaa ggcgaaaggc gtgttcatcc atcgggacga ttggatttcc atcacgcccg
    56641 aaatacgcct gcttctgacc gaattttaga aaaggaaacc catgtcaaac acacaaaaac
    56701 agcttgccct tgccaaagcg gcaaaaaaat ccgtcaacac ggcggatgcg gaagaaaaaa
    56761 accgcgcgct gcttgctatg gcggacagtc tggaagcggc ggcggaagat attttggcgg
    56821 caaaccgttt ggatttgaaa gcggcggcag gcaaaattcc cgacagcatg accgaccgcc
    56881 ttttgttgga cggcaaacgc atttgcgcga tggcggacgg catcagggcg gttgccgcgc
    56941 tgcccgaccc cgtgggcgaa atactggaaa cctcgactct gcccaacggc ttggaaatcg
    57001 tcaaaaagcg cgtggcgatg ggcgttatcg gcattattta cgaaagccgc ccgaacgtta
    57061 cttccgatgc ggcggctttg gcactgaaaa gcggcagcgc ggtcgtactc cgcagcggca
    57121 aagatgcatt tcaatccgca cgcgccatcg ttgccgccct gaaaacgggg ttggcacaaa
    57181 cccgcatcga ccccgaagcc gtacagctca tcgaagacac agggcgtgag ggcagttacg
    57241 aaatgatgag ggcgaaagat tatctagacc tgctgattcc gcgcggcggg gcagggctga
    57301 tacgggcggt ggttgaaaat gccgtcgtgc cggtcattga aacggggacg ggcatcgtcc
    57361 acatttatat cgacaaggac gcggattggg acaaggcact ccgtatcgtg tacaacgcca
    57421 aaaccggccg cccgtccgtg tgcaactcga tggaagtgct gctggtgcat gaaggcattg
    57481 ctgccgactt cctgcccaag ctcgaacggc tgttggttcg cggccgtata gaagccggac
    57541 tgccgcccgt ccgcttccgt ttggatccgc aggcggcgcg gtatatcggc ggcgaagcgg
    57601 cgggtgcaga cgatttcgat accgagtttt tagactacat cctcgccgtg aaaaccgtcg
    57661 cttcggttga agaggcggtc gggcacatcg aagcccgcgg cacgcaccat tcagacggca
    57721 tcgttaccga aaaccgccac gctgcggact atttcacgac ccatatcgat tctgccgccg
    57781 tgtatatcaa cgcgtccacg cgcttcaccg acggcggcga attcggcttg ggttgcgaaa
    57841 tgggcatctc cacgcaaaaa ctccacgccc ggggcccgat aggtttgaaa gagctgacga
    57901 gttacaaata catcgtacaa ggcacgggac aggttaggga ataatccgaa ttcaaacgtc
    57961 tgatatagtg gattaaattt aaaccggtac ggcgttgcct cgccttgccg tactatctgt
    58021 actgtctgcg gcttcgccgc cttatcctga tttttgttaa tccactataa aaatgccgtc
    58081 tgaaacagtc ttcagacggc atttttattt gcaaaaaaat caagcattgt ccaaggggac
    58141 gagaatcgta cggttgccgt tgtgttccgg tgcggacaca atgccttccg cttccatttg
    58201 gtcaatcaga cgcgcggcgc ggttgtagcc gatgcgcaag gcgcgctgta cgcccgaaat
    58261 gctggctttg cgcgttttca ggacaacgga tacggcctcg tcgtacatcg gatcggtttc
    58321 gccgtcgccg ctgcgcccga tgccgggcag ctcttcgctg ccgccgccgc tcaaaatatc
    58381 gtcaacatag tccggctcgc caaactgctt cagatattcg accacgcggt gcacctcttc
    58441 atccgaggca aacgcgccgt gaacgcgctg cggataggca gtacccggcg gcaggaacag
    58501 catatcgccc tgaccgagca ggttttccgc gcccatttgg tcgagaatcg tgcggctgtc
    58561 gattttgctg gacacttgga acgcgatacg cgtcgggatg ttcgccttaa tcagacccgt
    58621 gatgacatcg acgctggggc gttgtgtggc aaggataagg tggatgcctg ccgcgcgggc
    58681 tttttgggcg aggcgcgcaa tcagttcttc gattttcttg cctgccgtca tcatcaaatc
    58741 ggcaaactca tcgaccacga ccacgataaa cggcagtttt tccaaaggtt cgggatcgtc
    58801 gggcgtgagg ctgaacggat tgccgatttt ttctcccctt gctgcggctt cggcgatttt
    58861 ttggttgaag cccgcaagat tgcgcacgcc cataaagctc atcaggcggt agcgtttttc
    58921 catttcgtta acacaccagt tcagcgcgtt tgccgccagc ttcatatcgg taacgacagg
    58981 ggcgagcagg tgcgtgatgc cttcgtaaat gctcaattcc agcattttcg gatcgatcat
    59041 aatcatacgc acgtcttccg gcgcggcttt gaaaagcata gacagaatca tcgcgttgac
    59101 acccaccgat ttgcccgaac cggtcgtgcc ggcaaccagc aaatgcggtg ctttgcccaa
    59161 gtcggttacg acgggctgtc cggtaatgtc ctgaccgagc gcgagcgtca gcttggattt
    59221 ggattcggca aactcgggcg aattgaaaat ttcgctcagg cgtatcattt ggcgtttcgg
    59281 gttcggaagt tccaaaccca tgcaggtttt gccggggatg gtttcgacaa cgcggatgga
    59341 agccacgccg agcgaacgcg ccaagtcttt ttccaaattc agaacggaat tgccgcgcac
    59401 gccgacatcg ggttcgattt cataacgcgt aatcacgggg ccggaataag aatcgacaac
    59461 cttgaccttg actttgaact ccgccaattt ttcttcgatg gtgatgctgt tttccaacag
    59521 ttcttcttcg gtttgcgtcg cctcgggatt gaacagcgga ggcagaagca ggtcggttgt
    59581 cggcaggtgt tcggataccg caccggtctc ttccgattgg aacgcccctt catccgcttc
    59641 cgtatccgat acccggcagg acgggcgttc agacggcaca tcttcaaacg gacaaaccgc
    59701 ctgactgtca tgcccgaacg cttcggtttc cgacagatat tgcccgcttg accgctctgc
    59761 cgcaccctca ctgccgtcat ctgcaatagc ggcggtttcc tcctgccaac ctccattcaa
    59821 aacatcagcg gcaagatggt cggtttcggc aatgcggctg cgttgcgcct gctcgaatcc
    59881 tgccggcggc tcataggtac ggttgtagat ttccgatacg ggaggcggcg gcagaatatc
    59941 gatttcgggt acggctacct ccggcacttc gggtggttcg accacccaag catcgggcgc
    60001 ggcaggctct tcaatatgga tatcggcagc ttcatcataa accggaccgc cgtatcccac
    60061 agacgaaacg gtttccgtga aaacattttc ggtttcagac ggcatttcga catcccgttt
    60121 cccgacaacc gtccgacttt ccggaatcag gcgcgaaatc cgcgcctccg cagaaaccgt
    60181 tgccttgttc ggttctttca aattgacgga aacgcggcgg cgggcatcgc ggacggctgt
    60241 gccgtctgaa acggactgcc cttgggaaac atccggggat tttgcctccg cctgcccttt
    60301 ctcctgccct gcatgacggc ggaacggcgc attccgtgca ttttcggctt tgactgcaga
    60361 aaaggcagac ggatgctgct tctcaaaata cggctcaaat ccgtaatccg cagactcgga
    60421 aaacgcttct ttgtccgcat caaacatacg ggaatacgtg cgttgaagca cagggtcgtc
    60481 caaaccgata atctgcagcc cttccatcgg ggtatcggac acgcgtactt tggggacggc
    60541 tgttccgttt ttctcaaatg catcgatata gcgttttttc gtttccctta aagccgcgct
    60601 gcttaaagca cgcgttgctt cttccaaagt gatttcctta aaaaccggac ggacgggcga
    60661 agttttgctt tcagactgca tcaacccttc agcaatactc cggtcgaatg ggatgcggcg
    60721 gttgtcgatt acggcagttg caatgtcttc cgtatcggca gcctcttcct ccgcagcttc
    60781 tgctgcttcc gtttccgctt cttccgtccc gtttccactg tctgaatacc cgtcggatgc
    60841 ggtcggaaca tccgcacggt ttgcagaagc aggcggaacg ggcctgtccg gttcggattc
    60901 gtgcgccaga tagtttcggc agaaacggac gacaccgaca aacagccaat acactgccgt
    60961 tttgacggca tggaaaagca tcagggaaaa ctcgggaaaa tcgggcatac cgtctttgat
    61021 ttcaggcagc tccgcctgtt tttccccttt cttttcctgc cacgcagaaa cctcgcgcat
    61081 ccactcgcgt tcggattgtg cgcggacaaa aaacaggccg gcaagcgcaa gcaacaaaat
    61141 aacgatcaaa actatccaaa acatatgccg tttcccgcaa gacaaacgat taaccgagtt
    61201 tattttaacg tgtttccagc ccaaaaaaaa caaccggccg gcaattctgc cgaaaccgat
    61261 tcggctttcg gtttgccccc gccgacagta taatagccgc cccttccctt aatctttgcg
    61321 gcattaccat gattttccaa acagtctggt tttcagatgt ggtactgtcg gtttcgtgga
    61381 ttgtccttat cctgatactg gcagcttccg cgccgtcggc attccgttcg cttgcccgct
    61441 accgttccgc ccttcccctg tgtaccgtaa ttttttccgc agcatggtgt ctgaacgcct
    61501 ctgtcggcgg cggacagctt gcccagatga actaccacct gcttgccgtc aatctggtta
    61561 cactgatggt ggatacctcc gccgcccttt ggcttgccgc gctgctgatg ctgccctact
    61621 gcctgctgtt tgccggttct gccggcgcat atccgccgaa cgctttggtg ctgatactgc
    61681 ccgcgcttgt cgtcaaccgc ctgtcgcgta tgctggtcaa ccgtctgccg cccaatattt
    61741 tcatctttat tttcgtcaac ggctttctcg cttccgccgc cggcattctg ctgaccgggc
    61801 tggtgctgat cggtattttg gatgccgcaa acgcttttcc gtccgaaata ttgtggacgg
    61861 ccgccctgcc cgtctttatt ctgctggcgt gggcggaagc cttcctcagc ggcatttcaa
    61921 ctgccatttt cgtggcactg aagccccatt ggatcaacac tttcgacgac aaccgctatc
    61981 tgaagtccga gcgcggcata tggctgtagc cttcagacgg cataggcaga caaaaccatg
    62041 ctttccaaca tcctccccct ttccatcggt gcaatattcg gcacaacggc gcgttggctg
    62101 ctcaacctcg ccgtccccgc atcgttgtct cccgccacag gcaacctgtt tgccaactgg
    62161 acgggcgcgc tgctcatcgg catctttgcc gaaaccgtca gccatccgca atggaagctg
    62221 ctgctgatta ccggtttttt cggcagcctg accacgcttt ccggattttc actggaaacc
    62281 gtaaccctgc tccaatcgaa ccgtcccgct tcggcacttg ccaatatttt cctacacacg
    62341 gcaggttcgc tgctgctgac ttggctcggg ctgaagatag ggactgcagt caaataaccg
    62401 caaaaaattg cttcctttgg ttttgacata atctataaat tggcttcgct tgtttaaata
    62461 ctgcctgtgc caattatagt ggattaaatt taaatcagga caaggcggcg agccgcagac
    62521 agtacagata gtacggcaag gcgaggcaac gccgtaccgg tttaaattta atccactata
    62581 ccgttctcaa attcaaattg ggcttttagg tctataacaa agaaaaagcc ttgggaggat
    62641 aaacctacca aggctttttc ttaaaaaacg ctctatcact gtgcctaaaa atgcaaaaaa
    62701 gtaaccgtca taatcctttt gccaaaatca atatcatcat ccgatgaatg aacggacggt
    62761 atataagaaa gcgttaataa actcataaac cagtaagaaa aatcagtaac gaagatattc
    62821 attattaccc attcttaaaa attatcacgt tcgtttgggt aattatcata cccttttccc
    62881 tcttattact aaagcacgaa ttactttaaa gtacgcaccc agagacaagc cgaaaaggca
    62941 tatccgatcc gccaaacaaa atgcccgccg acttactccg gcgggcggtt ccaacatcct
    63001 gtcaatcctt catcagccag tattgcaaac cgattaatgt tttaccgtct ttaatttcat
    63061 cgtttgccaa tgcctgacgg acttcatctt tcgacatcag cacggtttcc gttatttcat
    63121 cttcatcatt agaaagcgta ctgcccaagc gcacgccttc cgcctcgaac agatacattt
    63181 tttcattgca aaaaccgacc gccgtataaa aactgtacag caggcgcacg ctgtcggcaa
    63241 cataaggcgt ttcctccgcc aattctcgca gcgcacacgc tgccatatcc tcgcccgcca
    63301 catccagctt gcccgcagga agttccaatg tcgcctgatt tgccgcataa cgccactgcc
    63361 gcaccaaaac gaccttttcg tcatccgtta ccgccaacac gcacgccgcg cccggatgcc
    63421 ggatgacgat gcgctgccct tcattgccgt tgggcagcct gaccttatcc ctgctgatac
    63481 tgacgaaacc gccctcgtaa atggtttcgc cgcctaattt tacttccctc aaatccactt
    63541 catatctcct ttccgtttcc tattctgccg ttcaatcttc acgcttgccg cgctcgattt
    63601 ccactccaac ctcgcgcacg ccttccaaaa tacccggctt gacgattttc acgtgcaccc
    63661 acaccgcgcc gaaatatccc aaaaccaaat cggcaatata ttccgccaac gcttccaaaa
    63721 gcaggaaatc ctgttctttc agatgtcggc gcagcgtttc gcatacctcg gcataatgca
    63781 ccgtattggc aatatcgtcg tccgaacccg ctttctcggg aacgccgatg tccaaatcga
    63841 caatcagggt ctgcaaccgt tcgcgttccc agccgtacac gccgataagc gtatccgcct
    63901 tcatgccgtg caaaaagatt ttatccataa tccgccccgt tttttgctaa aataaccgca
    63961 ccattctaag taaagtaccg caaatgttca acataccggc cgtcgccgtt tcctatttaa
    64021 tcggttcact ttctttcgcc gtcatcgttt ccaagtatta cgggatggac gacccgcgca
    64081 cctacggatc gggcaatccc ggcgcgacca atgttttacg cagcggcaaa aaaaaggcgg
    64141 ccgcgctgac gctcttgggc gatgccgcca aaggtttggt tgccgttttg cttgcacgcg
    64201 tgcttcaaga accgctcggt ttatccgaca gcgcaatcgc cgccgtcgca ctcgccgcgc
    64261 tggtcgggca tatgtggccg gtgtttttcg gatttaaggg cggcaaaggc gtggcaacgg
    64321 cattgggcgt gcttctggca ctctctcctg caactgcctt ggtctgcgcg ttgatttggc
    64381 ttgtgatggc attcggcttc aaagtatcct cccttgccgc gctggtcgcc acaaccgccg
    64441 ccccccttgc cgcactgttt tttatgcccc acccttcttg gattttcgca accctcgcaa
    64501 tcgccatatt ggtgttgctc cgccataaga gcaacatcct caacctgatt aaaggcaaag
    64561 aaggcaaaat cggcgaaaaa cgctgattcg gcatttgttt tccattacgt catgccgtct
    64621 gaaaccatgt tcccgcgttc agacggcatt tccgcacaaa cggctttcat acataccatg
    64681 ctcagttaca gacacgcatt ccacgccggc aaccacgccg atatgctcaa acacttcacc
    64741 ttgtttttag tgctgcaata tttcaaccgc aaagacaagc cctactggta catcgacacg
    64801 cacggcggcg cgggtttgta caatctcgaa ggcagcgagg cgcagaaagt cggcgaatac
    64861 cggcaaggca tcgccctgct ccgacaggcg caaaacctgc ctgccgaact ctctgacttt
    64921 gccgcgcaca tacaaaaaat cctaccctcg cccgaacttt actgcggctc tccgtggctg
    64981 gcgcaatcgc tgatccgcat cggcgacaaa ttgcgcctgt ttgagctgca ccccaccgac
    65041 tttgtccatc tgcaaaacaa tatgggcgaa gcgggattgg gcaaacgcgg acaagtgttg
    65101 cgcgaagacg gttacaaagg gctgatttcc ctgctgccgc ccccgccgcg acgcgctgtt
    65161 attctcatcg acccgcccta tgaggaaaaa caggactacc ggcgtgtaac ggaaacgctg
    65221 aaagccgctt taaaacggtt tgagtccggc tgttatctca tctggtatcc ctgcctcagc
    65281 cgcgaagaaa gccgcaagct gccggaagaa ttgaaaaaac tcgttcccga caactacctt
    65341 cacgccgaac tgcacgtcca cgcgccgaaa accgacggct tcggtatgca cggcagcgga
    65401 atgttcgtca tcaatccgcc ctatttgttg gcggaacaat tggcggcaaa cctccccgcc
    65461 ctgacacggc tgcttgcaca agacgaaggc gcgcgctacc ttttggacag caaaatccgc
    65521 tgaccccgat gccgtctgaa cccttcagac ggcatcttcc gtcaaacaaa caaaaccggg
    65581 cgatacacac tccatatcgt ccggttctgc ataaaaccag tattcaaaaa tcagaacacg
    65641 cttttcatta cacccacggt accaaccaca ccgttcagca gcatcagacc accggcagcc
    65701 gtacccatac cttgacggat tgcgtcatgc ttattggcac gtttttcacg ttccaaagcc
    65761 aactcctcag aaacattttt acgttgacgg cggtgttgcg ccagttccgc acggctaatt
    65821 cgcgcttcgg cacggttacg accagccttg attacggccg aatcgtcgcc gatagcatag
    65881 ttggctacag aattttcaga agcgcaggca gcaagcaaaa cggcacacac agcaacaacg
    65941 gaaatatttt tcaagttttt catacctgtc ctattatctc aaaatgaaga aaaaactaat
    66001 ccaactggag ttttatcgga taaaataaat attgggtgaa ttttcgtttg cctttttgat
    66061 ggcgcgtgcc gcatccatca tttcttcccg gcgttcttta cggtattcgg cacgctcggc
    66121 acgctcgctt atctgaatgg cacgactttt cgcctgtatt tccgctgcag attcttgagt
    66181 tacaaaacgg cggtctgcgt aagtacatgc cgtcaccaac atcgcagcca ccgacaacaa
    66241 aatcagtttc ttcattttca tctacctata taagt
//
LOCUS       DAXGCP010000002        51874 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.002, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000002 DAXGCP010000000
VERSION     DAXGCP010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 51874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 51874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..51874
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.002"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..215)
                     /locus_tag="ACFJCW_000069"
     CDS             complement(<1..215)
                     /locus_tag="ACFJCW_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4150328.1"
                     /translation="MKPKFTFIDLFAGIGGFRIAMQNLGGEYVFSSEWDEKAKLTYEA
                     NFGEVPFGDITLEEIKQYIPKQFDVLCG"
     gene            complement(322..735)
                     /locus_tag="ACFJCW_000070"
     CDS             complement(322..735)
                     /locus_tag="ACFJCW_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC4150329.1"
                     /translation="MDKLTPEQRKKCMQSNKSTGTKPELVLAKAMWALGLRYRKNSGS
                     IFGKPDFSFKKYKVAVFVDGEFWHGKDWEQKKAVIKGNREFWIAKIERNIQRDIEVTG
                     RLKAEGWTVLRFWSNDVVKNTTCCAEKVKEIIQTR"
     gene            complement(752..1741)
                     /gene="pheS"
                     /locus_tag="ACFJCW_000071"
     CDS             complement(752..1741)
                     /gene="pheS"
                     /locus_tag="ACFJCW_000071"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HFC4150330.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNETKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDPEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFE"
     gene            complement(1982..2341)
                     /gene="rplT"
                     /locus_tag="ACFJCW_000072"
     CDS             complement(1982..2341)
                     /gene="rplT"
                     /locus_tag="ACFJCW_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HFC4150331.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(2354..2551)
                     /gene="rpmI"
                     /locus_tag="ACFJCW_000073"
     CDS             complement(2354..2551)
                     /gene="rpmI"
                     /locus_tag="ACFJCW_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HFC4150332.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(2698..3219)
                     /gene="infC"
                     /locus_tag="ACFJCW_000074"
     CDS             complement(2698..3219)
                     /gene="infC"
                     /locus_tag="ACFJCW_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HFC4150333.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(3237..5150)
                     /gene="thrS"
                     /locus_tag="ACFJCW_000075"
     CDS             complement(3237..5150)
                     /gene="thrS"
                     /locus_tag="ACFJCW_000075"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HFC4150334.1"
                     /translation="MLNITLPDCSVRQYESPVTVAQIAASIGAGLAKAAVAGKVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGIYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKDYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWRTI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVRLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVKDALGRSWQCGTLQLDFVLPERLDAEYVTENNDRARPVM
                     LHRAILGSLERFVGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVIGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(5203..5279)
                     /locus_tag="ACFJCW_000076"
     tRNA            complement(5203..5279)
                     /locus_tag="ACFJCW_000076"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5243..5245),aa:Val,seq:gac)
     gene            5458..6573
                     /gene="tgt"
                     /locus_tag="ACFJCW_000077"
     CDS             5458..6573
                     /gene="tgt"
                     /locus_tag="ACFJCW_000077"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HFC4150335.1"
                     /translation="MLKFTLHKKDGLARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGETTREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLRGLEEFDFPGLAVGGLSV
                     GEPKPEMYRMLHAVGPILPEHKPHYLMGVGTPEDLVYGVAHGIDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKPDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMREAVEQGKFADWQAQFHENRARGVD"
     gene            6583..7665
                     /gene="hemH"
                     /locus_tag="ACFJCW_000078"
     CDS             6583..7665
                     /gene="hemH"
                     /locus_tag="ACFJCW_000078"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HFC4150336.1"
                     /translation="MPSEAASDGILPPYPTCTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRIVELPKWLWYPILHGLVLTFRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSIADVLAELKSQGVGRLLA
                     IPLYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTISRFYDDAGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDEYTVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKNYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            7856..8323
                     /locus_tag="ACFJCW_000079"
     CDS             7856..8323
                     /locus_tag="ACFJCW_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c2"
                     /protein_id="HFC4150337.1"
                     /translation="MNTTRLPTALVLHFLCAAASAADNSIMTKGQKVYESNCIACHGK
                     KGEGRGTAFPPLFRSDYIMNKPHVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKNQTDKMPSETGNPASDGIQIKPF"
     gene            complement(8320..10041)
                     /locus_tag="ACFJCW_000080"
     CDS             complement(8320..10041)
                     /locus_tag="ACFJCW_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HFC4150338.1"
                     /translation="MNSLFLLGGALLFLSVVSTTLSARLGMPLLLVFLAVGMLAGEEG
                     VGGIAFNNVVMANFISQLALAVILLDGGLRTQLSSFRIALKPASVLASWGVFATVLPL
                     GLFATFYLGLDWKFGVLMAAIVGSTDAGAVFSLLRNSGVRLNERVQATLEIESGANDP
                     MAVFLVTALITMIMQPAESGAAAFVRMLALQIGFGLLTGWAGGKILAKLVRRLNLAEG
                     LYALMIVSGGLLVFAFTNTIGGSGFLAVYLAGIIVGNQRNRATEHVLRVMDGLAWLAQ
                     ATLFVMLGLLVSPAGVLDRAAEALAIAAFLMLVARPLAVFGGLWKFNYSLREKAYISW
                     LGLRGAVPISLAMMPLVMGVPNSHLLFDVAFAVVVLSLLIQGTTIPVMARLLKVAMPN
                     KPEPKDTHDIWLAEKEIVRMSAFKVVAESEAEGHHPDTVEPISDSFDARCFALIRNGS
                     RIEMQSDTVLQAEDLAWYILPDGKVDKMAKYFTETGIGVRENFDFFGEFVVSPAARSG
                     DLALAYGLKLEAGEEGLSLAELFDKRSDSQEPVEGDRIDIGGFMLTAKEVDGGGNIGS
                     MGLKVPR"
     gene            10245..10985
                     /locus_tag="ACFJCW_000081"
                     /pseudo
     CDS             10245..10985
                     /locus_tag="ACFJCW_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            11055..12593
                     /gene="lnt"
                     /locus_tag="ACFJCW_000082"
     CDS             11055..12593
                     /gene="lnt"
                     /locus_tag="ACFJCW_000082"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HFC4150339.1"
                     /translation="MFSKLDKYWQHPALYWPLLILFAAATPFAFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAASSAYLFGLTAYTAQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPQGIKTGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLAIDNTARSGKRLLPAILIAALLAAGYTAQQT
                     DFTRPDGSRSTVALLQGNIAQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPI
                     MRQNLPENILAQFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPLLTTPLYKMMDMPLSDFRKGGGKQSAMMMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANVSNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYIGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            12857..13720
                     /gene="rpoH"
                     /locus_tag="ACFJCW_000083"
     CDS             12857..13720
                     /gene="rpoH"
                     /locus_tag="ACFJCW_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HFC4150340.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYEPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNVLSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            complement(13877..14353)
                     /locus_tag="ACFJCW_000084"
     CDS             complement(13877..14353)
                     /locus_tag="ACFJCW_000084"
                     /inference="COORDINATES: protein motif:HMM:TIGR00645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HFC4150341.1"
                     /translation="MESRAFVAARKGNVSSKISKTRTGYGFFAKMIFASRWLQVPIYA
                     GLTVVRAICAYKFLKSLKHLVMNLDVSDENAIMLAVLNLIDVVMIANLLTMVQIGGYE
                     SFVSRLRIDDHPDRPEWLSHVNAPVLKVRLSMSIIGIHPSICSKHLSIPPICRKSS"
     gene            14453..15337
                     /locus_tag="ACFJCW_000085"
     CDS             14453..15337
                     /locus_tag="ACFJCW_000085"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HFC4150342.1"
                     /translation="MSSGNIRIHSMTGFANAAAECGSKRINLDIRAVNHRFLDIQIRM
                     PDDLRHLENSIREQISSHLARGKVECKIQIQDAENGNQSLELNRVLVGQLAEINKNLR
                     KHYDLAKLGVADILRFPGVLASQKENTEALAKTIVELADKALKDFTAARRREGKKLGE
                     HLLQRIKNMEEIIDALSEIFPALVEAHKEKIRTRLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(15428..15943)
                     /locus_tag="ACFJCW_000086"
     CDS             complement(15428..15943)
                     /locus_tag="ACFJCW_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC4150343.1"
                     /translation="MMILKTAPLKRRFAAILYEMLLVGAATCLAALLAGIAAIFLNPV
                     SIAVSALVTSILIMGAWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALVWLILPWGFALLNPDRQFLYDFLA
                     GTRLVDVKEQS"
     gene            complement(16019..16438)
                     /locus_tag="ACFJCW_000087"
     CDS             complement(16019..16438)
                     /locus_tag="ACFJCW_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150344.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(16559..17557)
                     /gene="holA"
                     /locus_tag="ACFJCW_000088"
     CDS             complement(16559..17557)
                     /gene="holA"
                     /locus_tag="ACFJCW_000088"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HFC4150345.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEAVDALRAAAKKQGY
                     LNREAYTADASFDWNELLQTAGNAGLFADLKLLELHIPNGKPGKNGGEALQDFAARLP
                     EDTVTLVLLPKLEKTRLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIE
                     ADALALFAERVEGNLLAARQEIDKLALLYPKGHAVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLEEEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGDKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKQLVVSLAE"
     gene            complement(17559..18038)
                     /gene="lptE"
                     /locus_tag="ACFJCW_000089"
     CDS             complement(17559..18038)
                     /gene="lptE"
                     /locus_tag="ACFJCW_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HFC4150346.1"
                     /translation="MNKIFLTAAALVLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRILDYADNEILGKQEEEETLWAEMRQDVAKQIVRRLTFLKAE"
     gene            complement(18090..18869)
                     /gene="pgeF"
                     /locus_tag="ACFJCW_000090"
     CDS             complement(18090..18869)
                     /gene="pgeF"
                     /locus_tag="ACFJCW_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HFC4150347.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDDPETVRRNREIVQQQVGLPVAYLNQIHSTIVVNAAEALDGTPDADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWSGLAGGVLQNTIAAMKVPPVEI
                     MAYLGPAISADAFEVGQDVFDAFCTSMPEAAAAFEPIGGGKFLADLYALARLILRREG
                     VGGVYGGTHCTVLERDIFFSYRRDGATGRMASLIWLDGNAV"
     gene            19322..20269
                     /locus_tag="ACFJCW_000091"
                     /pseudo
     CDS             19322..20269
                     /locus_tag="ACFJCW_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
     gene            complement(20422..21546)
                     /gene="rluD"
                     /locus_tag="ACFJCW_000092"
     CDS             complement(20422..21546)
                     /gene="rluD"
                     /locus_tag="ACFJCW_000092"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HFC4150348.1"
                     /translation="MQNTSFDNESDYSDDSDFASASGTENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPES
                     MDLDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLPAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAAVKFGGKPAVTHVKVLERYLAHSYIECSLGTGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            21545..22348
                     /locus_tag="ACFJCW_000093"
     CDS             21545..22348
                     /locus_tag="ACFJCW_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HFC4150349.1"
                     /translation="MKKILLTVSLGLALSACATQGTADKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESL
                     AILELAYKKLDKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(22418..24637)
                     /locus_tag="ACFJCW_000094"
     CDS             complement(22418..24637)
                     /locus_tag="ACFJCW_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HFC4150350.1"
                     /translation="MFRRWFLPCWVVGVAVSFALSVVPHWPFWLAAFAVLAVLARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWRAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGVGGV
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWRQADADGGLSDGIGLMRALSVGEQSALRP
                     GLWQAFRPLGLTHLVSISGLHVTMVAVLFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPLAVLGVG
                     TWLSFGLVAALIWACAGRLYEGKRQTAVRGQWAASVLSLVLLGYLFASLPLVSPLVNA
                     VSIPWFSWVLTPLALLGSVVPFAPLQQAGAFLAEYTLRFLVWLADVSPEFAVAAAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVSYRPEAVPENEAAVTVWDAGQGLSVL
                     VRTANRHLLFDTGTVAAAQTGIVPSLNAAGVRRLDKLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLRPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEAELVKKYGSNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRVYKFYWQKKPFE"
     gene            24669..24944
                     /locus_tag="ACFJCW_000095"
     CDS             24669..24944
                     /locus_tag="ACFJCW_000095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150351.1"
                     /translation="MIKQSHKTVITRFENDKNANEKPQYYPRQRQTFHRHSRKSGNPK
                     TKSRRNLSERTEPQKPASHLRLNNRTKKAEIKTSGFFFKLAIKHQNE"
     gene            25023..29807
                     /locus_tag="ACFJCW_000096"
     CDS             25023..29807
                     /locus_tag="ACFJCW_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S6 family peptidase"
                     /protein_id="HFC4150352.1"
                     /translation="MKAKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKRGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWSASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLNTYKDKNRFSSFVRIGAGRQLVYEKGVYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNKQYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQRDNAGTVKG
                     NGEHHWNITSGTNSKIGSTAVRLAGNERDANNGQNVTFEDNGTLVLDQNINQGAGGLF
                     FKGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQ
                     GQLKVGDGTVILNQQADADKKVQAFSQVGIVSGRGTLVLNSPDQINPNNLYFGFRGGR
                     LDANGNNLTFEHIRNVDEGARIVNHNTDHASTITLTGKSLITNPNSLSVHSIQNDYDE
                     DDYSYYYRPRRPIPQGKDLYYKNYRYYALKSGGSVNAPMSENGAAENNDWVFMGYTQE
                     KAKKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGANLNGK
                     ISVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKAAEIAVN
                     QSASFSSGRNVSDITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTGNLSDKAL
                     NSFDATRINGNVNLSQNAALVLGKAALWGQIQGQGNSRVSLNQHSKWHLTGDSQVHNL
                     SLADSHIHLNNASDAQSANKYHTIKINHLSGNGHFHYLTDLAKNLGDKVLVKESASGH
                     YQLHVQNKTGEPNQEGLDLFDASSVQDRSRLFVSLANHYVDLGALRYTIKTENGITRL
                     YNPYAGNRRPVKPAPSPAANTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAL
                     RQQAKAEQVKRQQAEAGRKSAELSAKQRAGEEERRQTAQSQPQRRKRRAAPQDYMAVS
                     QDRPKRRGHRSVQQNNVEIAQAQAELAHRQQEERKAAELLAKQRAEAEREAQALAARR
                     KAEAEEAKHQAAELAHRQEAKRKAAESAKRKAEEEEHRQTAQSQPQRRKRRAAPQDYM
                     AVSQDRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDYEEIPLDALEDEDV
                     SQSVDTSDKQPQDNTELHEKVEAVSLQPRAAQPRTQAAAQADAVSTNTNSALSDAMAS
                     TQSILLDTGASLTRHIAQKSRADAEKNSVWMSNTGYGRDYASAQYRRFSSKRTQTQIG
                     IDRSLSENMQIGGVLTYSDSQHTFDQAGGKNTFVQANLYGKYYLNDAWYVAGDIGAGS
                     LRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGDDSV
                     KVSSMAVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGKSFAYKADNQ
                     QQYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(29883..31085)
                     /gene="trpB"
                     /locus_tag="ACFJCW_000097"
     CDS             complement(29883..31085)
                     /gene="trpB"
                     /locus_tag="ACFJCW_000097"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HFC4150353.1"
                     /translation="MKNYHAPDEKGFFGEHGGLYVSETLIPALKELEQAYNEAKNDPE
                     FWAEFRRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     ARRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VIGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     AQMQEATGRQPDVAVACVGGGSNAIGLFYPYIEEENVRLVGVEAGGLGVDTPDHAAPI
                     TSGAPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIEL"
     gene            complement(31168..31797)
                     /locus_tag="ACFJCW_000098"
     CDS             complement(31168..31797)
                     /locus_tag="ACFJCW_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC4150354.1"
                     /translation="MSENLLEIETHPFDPVLPPKAAVMMMGTFPPKEDKRAMQFHYPN
                     FQNDMWRVYGLVFFNDAAHFRMPSHGEAAHSEKAFDAEKIKAFLHERGIASCPTVLKA
                     AREHGNASDKFLKVVETVDLAAVLAKIPDCRHICTTGGKATEILLDIQGGGIKMPKTG
                     ETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAFFEMAGLCEKQL"
     gene            32073..32852
                     /gene="rsmA"
                     /locus_tag="ACFJCW_000099"
     CDS             32073..32852
                     /gene="rsmA"
                     /locus_tag="ACFJCW_000099"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HFC4150355.1"
                     /translation="MKEHKARKRFGQNFLQDTRIIGDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGISGKKKIVG
                     NLPYNISTPLLFKLAEVADDVADMHFMLQKEVVDRMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKIDSAVVRMIPVKHRIGKADDFEHFAKLVKLAFRQRRKTIRNN
                     LKELADDDDLQAVGISPQDRAEHIAPEKYVALSNYLADKAV"
     gene            32867..33436
                     /locus_tag="ACFJCW_000100"
     CDS             32867..33436
                     /locus_tag="ACFJCW_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HFC4150356.1"
                     /translation="MESNLQKTERLIREINRLHAQYSQDYFETGKVRKINLSHTLKNV
                     PTEHILSYRLNLHEAVNDYLAFADTRGIDFFYRVKTAESIHDKINRYLARGTQYPTNN
                     ILNDIFGARLIWPSETVAGILEKLDGWKTEYGLKNWYLRDAGGYIGIHIYFKNSSNFY
                     YPWELQVWDEKDAKANIENHMAYKRNFVR"
     gene            33547..34002
                     /locus_tag="ACFJCW_000101"
     CDS             33547..34002
                     /locus_tag="ACFJCW_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150357.1"
                     /translation="MKYTAALLTFLLTACMNPNDAFFQNRRYQMPEAQLNGSNAVFHY
                     GYSQNPDHDLLVDQVRVPDAYRASFARDWIAKEQGYRKNDCVLEKAESGGVTYYTCDA
                     EKGFNGTRFVIYVVNMKNDKGYVKVYRGMNKPNQEELTKLVADLNKFYP"
     gene            34044..34772
                     /locus_tag="ACFJCW_000102"
     CDS             34044..34772
                     /locus_tag="ACFJCW_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC4150358.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLDNITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVIFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            34845..35204
                     /locus_tag="ACFJCW_000103"
     CDS             34845..35204
                     /locus_tag="ACFJCW_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150359.1"
                     /translation="MYFVDRTAAVLKPTARFLEWLKSTDENMPDLTIEQLRADCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEADLNITPVFDNMM"
     gene            35209..35649
                     /locus_tag="ACFJCW_000104"
     CDS             35209..35649
                     /locus_tag="ACFJCW_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HFC4150360.1"
                     /translation="MRAFQTALRPSRILNILTVSLHSASIAVCLTWFYGRMMWFGLAA
                     LAASYAYSLRITNLKHRHAITAITIDRDGRAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGKTVRQCIMPDMTDKESYRRLKVWVLWRQPKKTAETDTSD"
     gene            35680..36954
                     /gene="folC"
                     /locus_tag="ACFJCW_000105"
     CDS             35680..36954
                     /gene="folC"
                     /locus_tag="ACFJCW_000105"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HFC4150361.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVSEVKKRMNLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGFKTGTLTSPHLLHYNERIAINAEPVSDDTIIASFER
                     IEAARGEISLTYFEFNALAAVDIFIREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPASLVAHAEAIGAKLLMVQRDF
                     EFHAMENIQWNYRFRPQHSDGPARNRNALPFPALRGAYQLSNAACALTVLECLDDRLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTILDVGHNPHAARALRRNLINLAYAQKRTAV
                     FSMLSDKDIDGVSETVKDQFDEWYIAPLDVPRGMTADALKAKLEQHHIENIQTFAAVR
                     DAYRAAASKAGEDDRIVVFGSFHTVADVMSVL"
     gene            36968..38008
                     /gene="ftsN"
                     /locus_tag="ACFJCW_000106"
     CDS             36968..38008
                     /gene="ftsN"
                     /locus_tag="ACFJCW_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC4150362.1"
                     /translation="MSENKQNEVLTGYEQLKRRNRRRLVTASSLVAASCILLAAALSS
                     DPADSNPAPQAGETGATESQTANTAQTPALKSAAENGETAADKPQDLAGEDKPSAADS
                     EISEPENVGAPLVLINDRLEDSNIKGLEESEKLQQAETAKTEPKQAKQRAAEKVSATA
                     DSTDTVAVEKPKRSAEPKPQKAERTAEAKPKAKETKTAEKVADKPKTAAEKTKPDTAK
                     SDSAVKEAKKADKAEGKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKAGKKAA
                     IQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
                     RVHGIAGQVTNE"
     gene            38001..38498
                     /locus_tag="ACFJCW_000107"
     CDS             38001..38498
                     /locus_tag="ACFJCW_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HFC4150363.1"
                     /translation="MNSLPIADLLASAVIAACIVISTMRGVIAEAGSMVAWVVSFFFA
                     KLFAAPFADLAFASFQPRLFALALSFISLFVIACLIQKMLRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGVLIVTLLIMLASKTDLPDTEEWQQSYTVPFFVSLSEAVLNHTDNAPE
                     SLDDD"
     gene            38692..40236
                     /gene="purF"
                     /locus_tag="ACFJCW_000108"
     CDS             38692..40236
                     /gene="purF"
                     /locus_tag="ACFJCW_000108"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HFC4150364.1"
                     /translation="MCGVLGLVSHEPVNQLLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVSEVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHINTGSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAEVHRLVRGAYGVVAMIAGYGMVAFRDPYGIRPLALGSQTDSEGRKSYAVASESVA
                     FNALAYDLERDIRPGEAVFVGFNGTIIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLNKPYREGLIKNR
                     YIGRTFIMPGQSTRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQGLGDLEA
                     VVKALNPKIESFDSSCFNGIYRTGDIDDAYLDRLSAEKSGCAGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            40336..40827
                     /gene="greB"
                     /locus_tag="ACFJCW_000109"
     CDS             40336..40827
                     /gene="greB"
                     /locus_tag="ACFJCW_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HFC4150365.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLEAAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGVDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            40886..41512
                     /locus_tag="ACFJCW_000110"
     CDS             40886..41512
                     /locus_tag="ACFJCW_000110"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HFC4150366.1"
                     /translation="MRKIRTKICGITTPEDALYAAHAGADALGLVFYPQSPRAIDIIK
                     AQKIAAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDAFCRQFDRPYIK
                     AIRVQTASDIRNAATRFPNAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATANRLSR"
     gene            complement(41986..44817)
                     /gene="lbpA"
                     /locus_tag="ACFJCW_000111"
                     /gene_synonym="tbpA"
     CDS             complement(41986..44817)
                     /gene="lbpA"
                     /locus_tag="ACFJCW_000111"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HFC4150367.1"
                     /translation="MNRRHTFPLTLTALAVAAAFPSYAANPETAAHDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSRGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVEYGIDRLDAFRQTYDIKRKTTEPFFLVEGENTLK
                     PVAKLAGYGIYLNRQLNRWVKERIEQNQPLSAEEEAQVREAQARHENLSAQAYTGGGR
                     ILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEAEKFR
                     DKSGVYDGDDFRDGLYFVPNIEEWKGDKNLVKGIGLKYSRTKFIDEHHRRRRMGLLYR
                     YENEKYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSSD
                     RFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASKAVSRPEQLSHNAARISESTG
                     FDEKNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYFD
                     FSLGGRYDRKNFTTSEELVRSGRYADRSWNSGIVLKPNRHFSVSYRASSGFRTPSFQE
                     LFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVADQ
                     KTKLPDSAGRLTEIDIRDYYNAQNMSLQGINILGKIDWNGVYGKLPEGLYTTLAYNRI
                     KPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELAY
                     LAGDQKRYSAGRVTSSWKTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAES
                     TANRHGGDSNYGRYAAPGRNFSLALEMKF"
     gene            complement(44814..46952)
                     /locus_tag="ACFJCW_000112"
     CDS             complement(44814..46952)
                     /locus_tag="ACFJCW_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC4150368.1"
                     /translation="MRKLNYYGIALLPLMLASCGGNFGVQPVVESTPTAYPVTFKSKD
                     VPTSPPPAEPSVETTPVNRPAVGAAMRLLRRNIATSDKDGNDFPNSKQAEEKLSFKED
                     DVLFLYGSKGNKLQQLKSEIHKRNPEAGITTSEKENEKYGYKFVDAGYVYTKNGKDEI
                     EQNSGGKRFTHRFGYDGFVYYSGEHPSQSLPSAGRVKYSGNWQYMTDAKRHRTGKAVA
                     SDDLGYITFYGNDIGATSYAAKDADDREKHPAEYTVDFDKKILKGELIKNQYVQKRND
                     PKEPKKPLIIYNITADLNGNRFTGSAKVNTEVKTRHADKEYLFFHTDADQRLEGGFFG
                     DKGEELAGRFISNDNGVFGVFAGKQKTETSGTNPAMPSEKYTKILDSLKISVDEATDN
                     HARKFAISPMPDFGHPDKLLVEGREIPLVSKEKTIDLADGRKMTVSACCDFLTYVKLG
                     RIKTERPAVKPKAQDEEDSGINNGEESEDEEIAEESEDEVSEDDNGEDEDEIVEEEAD
                     EAEEIEEEAEEEEPEEESPEEGNGVSDGIPPAPEALKGRDIDLFLKGIRTAEADIPKT
                     GTAHYTGTWEARIGVPDKKDDQPGTTSIQKDSYANQGAKAEFTVDFGKKSIFGTLTEK
                     NDTNPAFYIEKGVIDGNGFHALAHTRNNGIDLSGQGSTKPQSFKADNLLVTGGFYGPQ
                     AAELGGSILDSDRKFGAVFGAKKDDKEATQ"
     gene            complement(47105..48028)
                     /gene="era"
                     /locus_tag="ACFJCW_000113"
     CDS             complement(47105..48028)
                     /gene="era"
                     /locus_tag="ACFJCW_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HFC4150369.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRLTDADRVVLKQLPKHTPVILVINKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEGDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDNKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(48075..48794)
                     /gene="rnc"
                     /locus_tag="ACFJCW_000114"
     CDS             complement(48075..48794)
                     /gene="rnc"
                     /locus_tag="ACFJCW_000114"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HFC4150370.1"
                     /translation="MKDDVLKRQAHTAIQKKLGYAFRDMSLLRRALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDAFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSSGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFAERVRRADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHADDSMFVISCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            48963..49286
                     /locus_tag="ACFJCW_000115"
     CDS             48963..49286
                     /locus_tag="ACFJCW_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HFC4150371.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADITKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            49333..49809
                     /gene="ribH"
                     /locus_tag="ACFJCW_000116"
     CDS             49333..49809
                     /gene="ribH"
                     /locus_tag="ACFJCW_000116"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HFC4150372.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSQMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNFASSEKFDALIAIGVVIRGETYHFELVANESGAGIGR
                     VALDYNIPIANAVLTTENDAQAIERIGEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            49887..50312
                     /gene="nusB"
                     /locus_tag="ACFJCW_000117"
     CDS             49887..50312
                     /gene="nusB"
                     /locus_tag="ACFJCW_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HFC4150373.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(50391..51425)
                     /gene="pyrC"
                     /locus_tag="ACFJCW_000118"
     CDS             complement(50391..51425)
                     /gene="pyrC"
                     /locus_tag="ACFJCW_000118"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HFC4150374.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVAPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDQATPELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAASVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAVELYA
                     EVFEKAGALDKLEAFASKNGARFYGIPENADTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(51486..51683)
                     /locus_tag="ACFJCW_000119"
                     /pseudo
     CDS             complement(51486..51683)
                     /locus_tag="ACFJCW_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT        12947 a        14740 c        12617 g        11570 t
ORIGIN      
        1 ccacacagca catcaaattg cttcggaatg tattgtttga tttcttccaa agtaatatcg
       61 ccaaacggca cttctccgaa attggcttcg tacgtcagtt tggctttttc gtcccactcg
      121 ctcgaaaaca cgtattcccc gcccaagttc tgcatcgcga tgcggaagcc cccgatacct
      181 gcgaacaagt cgataaaggt aaatttgggt ttcaaggccg tctgaaaagt atcgttgttt
      241 tcaaaaaggc ggtattgtgc tgctttttct tttaaccgtt catcctgccc atcttcctta
      301 atcttgtttt tgtaaatcaa ttcatcttgt ttggatgatt tctttgactt tttcggcaca
      361 gcaggttgta tttttgacga catcgttact ccaaaaacgt aaaaccgtcc agccctcggc
      421 tttcagacgg cctgttactt ctatatccct ttggatattg cgctcaattt tggcaatcca
      481 aaactcacga tttcccttta ttaccgcttt tttctgttcc caatccttac cgtgccagaa
      541 ttccccatcg acaaatacgg caactttata ttttttaaat gaaaaatcag gttttccaaa
      601 aatgcttccg ctatttttcc gatacctgag ccccaaagcc cacattgcct tcgccaacac
      661 aagctcgggt ttcgtccctg tacttttgtt ggactgcata cattttttgc gctgctccgg
      721 ggttaattta tccattgggt ttatttgaga tttattcaaa ctgcttcaag aagttcaaat
      781 cgttatcgaa gaacaagcgc aggtcattga cgttgtagcg caacatggca aagcggtcga
      841 gaccaatacc gaaagcgaaa ccggtatatt tttcagggtc gatattgaca tttttcaaca
      901 cattaggatg taccataccg caaccgccta cttccaacca tttgccgttt tctcccatga
      961 tgtcgatttc ggcagaaggc tcggtaaatg ggaagaaaga cggacggaaa cgcacttgta
     1021 ggtcatcgcg ttcaaagaag cgacggataa agtcagtgaa cactgctttt aagtcggcaa
     1081 aagttacgcc ctcttctacc cacaaaccct cggcctgatg gaacataggc gagtgcgtgg
     1141 catcgctgtc cacacggtaa acgcggccgg gggcgataat gcggatgggc ggctcttttt
     1201 tatcgagcat atagcggatt tgaatcgggg aagtgtgcgt acgcaaaaca tcgccgtttt
     1261 caacgtaaaa cgtatcctgc atcgcacggg caggatggtt tgcagggatg ttcagggctt
     1321 ggaaattgtg aaaatcgtct tcgatttcag gcccgtccgc cacttcgaaa cccattccgt
     1381 gaaagagttc gaccacacgt tgcaaggtca gggttacggg atgcaggctg ccgccttcct
     1441 gagcgcgtcc gggcagggta atgtcgaggg cttcggcggc aagtcgggct tgcagcttgg
     1501 tttcgttgag ggcatcgcgt ttggcattaa aagccgtctg aaaccggttt ttgcattcat
     1561 tgatatgcgc acctatggtt ttgcgctctt caggcgacat ttgccccaaa gttttcagaa
     1621 gtccggtcaa ctcgccggtt ttgccaagat aacgggcttt gatttgttct agagcgttga
     1681 agtcttgcgc agcttctact gcggcaatgc cttctgcaac gatacggttt acattttcca
     1741 taatatcaag cctgtcaatt aatgatatgc cacctgaaac aacgaggccg cctgtatagc
     1801 ctgacatatc agactcttca gacgacctta ttttcttcac ggccaatcca ttggataaat
     1861 tttctgtatt ttaacgcaaa tttatttaaa aaaatagact ttaaagaaag aaaatcaatc
     1921 acatagaatt tccgcaaaca aagaaaaaag gaagccgcag cttccttttc aattttttgg
     1981 attaagcagc caaagcagct ttggcttttt caaccaattg tgcaaaagcg gctttatcga
     2041 acacggccaa atcagccaat actttgcggt cgatttcgat agaggcgcgt ttcagaccgt
     2101 tcataaattt gctgtaagac aacccgtttt cacgcgcacc tgcattgata cgaacaatcc
     2161 acaattgacg gaattggcgt ttgcgttggc ggcggtcacg gtatgcgtac tgaccagctt
     2221 tcattaccgc ctgcttggca acgcggtaaa cgtttttacg acgaccacga tagcctttgg
     2281 ctaacgcgaa gattttttgg tgacgggcac gggcggtaac accgcgtttt acgcgtggca
     2341 tattctaaac tccttaagcg tagggtaaca ttttagcaac agaagccaaa tcgcgatcat
     2401 ttaccataga ggtaccgcgc agttggcgtt tgtttttggt ggtcttttta gtcaagatgt
     2461 ggcgtttgaa cgcatgagcg cgtttcacac cgccgttacc cagtacttta aagcgttttt
     2521 tcgcgctaga cttggttttc attttaggca tgggaaaact ccattcgtta tcggataagg
     2581 cattaggggg ttttaaaaca tcggtttcaa acacttgaac ccacaatgcc acggtttttt
     2641 gccgcaattg aaaacttact ccgaagcggc aatcggagta agcggaaaat tatagcttta
     2701 ttttttcttc ggcgcaatca tcatcaccat ttgacggcct tccattttgg gaaaggactc
     2761 gatttgcgcc acttcagcca aatcttcttt tacacgttcc aaaagttgcg cgccgagttg
     2821 ctggtgagcc atttcacggc cgcggaaacg caatgtcact ttgactttat cgccgtcggc
     2881 aaggaagcgg ttgatgttgc gcatcttgat ttgataatcg ccctcatctg tacccggacg
     2941 gaatttgatt tccttgattt gcacctgctt ttggtttttc ttggcttcgt cgcgcttctt
     3001 ggcttgttgg tatttgtatt taccgtaatc catcagtttg cacacaggag gtttagcagt
     3061 tggggaaatc tctaccaaat cgacatcctg cccttcggcc atagccaaag cttcacgaac
     3121 tgaaacgaca ccaagctgtt cgcctgactc actgattaaa cgcacttctt tggcggtaat
     3181 ttcaccgttg attcgtgctt cgcgttcttg agcgatgatg aatactccta taaaaattaa
     3241 tgattgacga gggcatcagt gatttcttgc tgcaattgcg caatgaaatc atccaaatcc
     3301 aaagaaccca agtcttccgc tttgcggcgt accgcaactt tgttttcttg tttctcttta
     3361 tcgccgataa cgatttgata agggaaacgg tattggctgt tgtcgcggat tttgtaaccg
     3421 attttttcat tacgcaaatc caactcggcg cggaagcctg ccgcctgcaa tttggcagca
     3481 acttcccgac aataatctgc ctgattttcg gtgatgttca taatcaccat ttgaaccggt
     3541 gcaagccata acgggaaaga gcctgcatgg ttctcaatca gaatgccgac aaaccgctcc
     3601 aaagaaccta aaatggcgcg atgcaacata acaggccgcg ctcggtcgtt gttttctgtt
     3661 acatattctg catccaagcg ttccggcaag acgaaatcca gttgtaatgt accgcattgc
     3721 caagaacgac ccaaggcatc tttgacgtga tattcgattt taggcccgta aaacgcaccc
     3781 tcgcccggca attcgcccca ttccacgccg caggcagtca atgcctcgcg caaaccctgc
     3841 tctgccttat cccacacgtc gtctgaacct gcgcgttttt cagggcgaag ggaaagcctg
     3901 acggatacat catggaaacc gaactgtttg tagatgcgaa ccaacaattc attgaacgca
     3961 cgagcctcgc tgacgatttg atcttcggta caaaaaatat gcgcatcatc ctgcacaaaa
     4021 ccgcgaaccc tcatcagacc gtgcagtgcg ccgctcggct cgttgcggtg gcaagaaccg
     4081 aattccgcca aacgcatcgg caaatctcga tatgaacgca aaccgttgtt gaaaatttga
     4141 acatgacccg gacagttcat cggtttaacc gcatattcgc gtttttccga actggttacg
     4201 aacatattgt ctttgtagtt gtcccagtgg ccggattttt cccaaaaggt tttatccatg
     4261 atttgggggg ttttaacttc cttgtaaccg gcggcattca gctctttacg catatgctgc
     4321 tcgatagtcc gccacaaagc ccaacctttg ggatgccaaa acaccatacc cggcgcttcg
     4381 tcctgcaagt ggaacaaatc cagttgcttg cccaatttgc ggtggtcacg tttttctgct
     4441 tcttcaatgc gttggatata gtcttttaat tcgtctttcg tcgcccaagc agtgccataa
     4501 atacgttgca gcatttcatt attgctgtcg ccgcgccaat atgcgcctgc cagcttggtc
     4561 agtttgaagt ttttcaggaa acgggtattc ggaacgtgcg ggccgcggca catatcgaca
     4621 tattcctggt gatgatatat ccccatcgct tccacttcgg gcatatcgtc aatcaggcgc
     4681 agtttgtatt cttcgccgcg ctcttgaaaa attttaatcg cctccgcacg cggagtcatg
     4741 attttgacca catcataatc ttgggcaatc aattctttca tacgcgcttc aatggcggca
     4801 acatcttccg gtgtaaacgg tttttccgtg gcgatgtcgt aataaaagcc ctcttcaatg
     4861 acggggccga taaccatttt tgcattagga tagagttgct tgacggcatg cccgacaaga
     4921 tgtgcgcagg aatggcggat gatttcgatg ccttcctgat ctttcggagt aatgatttga
     4981 acagcagaat cctcaacaat cgggtcgcac gcatcgacca atttgccgtt taccttgcct
     5041 gccaccgccg ccttcgccaa accggcaccg atagacgcag caatttgagc cacggtaacg
     5101 ggggattcgt attggcggac tgaacagtcc ggcaaggtaa tattcaacat caaacgctcc
     5161 gaaagattaa aaaataacgg cataaatgcc gttatgggaa tttggtaggc acgattggat
     5221 tcgaaccaac gacccccacc atgtcaaggt ggtgctctaa ccaactgagc tacgtgcctt
     5281 caaagaattt ttgtatttta tcgggtcgtt ttaatttttg caagagagat gtgcatttct
     5341 ttatgcaaca ttgtggcaag atttggggat accgtctgaa aaaccgtggg aattcattta
     5401 taatgccgtc ttttaaaata tatttcgacc cctgtcgccc aacttacatt caatcttatg
     5461 cttaaattta ctttacacaa aaaagacggt ctcgcccgac gcggcacgct ggagttgaac
     5521 cacggaaaaa tcgaaacgcc ggttttcatg ccggtcggta cttacggttc ggtcaaagcg
     5581 atgaacccgc aaaacctgca cgacatcaag gcgcaaatta ttttgggcaa cacttatcat
     5641 ttgtggctgc gtccgggttt ggaggtcgtc gaacagtttg gagggcttca cggttttatc
     5701 ggctgggaca aaccgattct gaccgactcg ggcggttttc aggttttttc tttgtcggat
     5761 atgcgcaagc tgaccgaaga aggctgtacg tttaaaagcc cgattaacgg cgacaagctg
     5821 tttttatcac ctgaaatttc catgaaaatc caaacggttt tgaactcgga tatcgcgatg
     5881 cagttggacg aatgcacgcc gggcgaaaca acgcgcgaac aggcgcgaaa atccctgcaa
     5941 atgagcttgc gctgggcgga acggagcaaa aaagcctttg aagatttgaa aaacccgaac
     6001 gcgctgttcg gcatcgtgca aggcgcgatg tatgaggatt tgcgcgaaga atctttgcgc
     6061 ggtttggagg aatttgattt tcccggcctt gccgtcggcg gtttgtccgt cggcgaaccc
     6121 aagcccgaaa tgtaccgtat gctgcacgcc gtcggcccga ttttgccgga acacaagccg
     6181 cattacctga tgggcgtagg cacgccggaa gacctcgtgt acggcgtggc gcacggtatc
     6241 gatatgttcg actgcgtgat gcccacccgc aatgcgcgca acggctggct gtttacccgt
     6301 ttcggcgatt tgaaaatcaa aaacgccaaa cacaagcccg acaagcgtcc gatagacgaa
     6361 agctgcacct gctacgcctg ccaaaatttc agccgcgcct acctgcacca tctgcaccgc
     6421 gccggcgaaa tcttgggcgc gcaattgaac accatccaca acctgcattt ctaccaagtc
     6481 attatggcgg aaatgcgcga agccgtcgaa caaggcaaat ttgccgactg gcaggcgcaa
     6541 ttccacgaaa accgtgcgcg cggcgtggac tgattcccgg caatgccgtc tgaagccgct
     6601 tcagacggca ttttgccgcc ttaccctacc tgcactattt ttcagaaacc gatcatgctt
     6661 ccattccttc cagaaccctc cctttcctat acgcaacaaa accgtaccgc cgttttgctg
     6721 ttgaacctcg gcacacccga cgcaccgacc gcacaggcgg tacgccctta tctgaaatcc
     6781 tttctgaccg accggcgcat cgtcgaactg cccaaatggc tgtggtatcc cattctgcat
     6841 ggcctggtac tgacgttccg ccccaaaaaa agcgcgcacg cctatgaaaa aatctggttt
     6901 aaggaaggtt cgcccctaga agtttacaca gcacgccaag ctgccgcgct tgccgaacgt
     6961 atgcccgacc tcatcgtccg ccacgccatg acttacggca atccttcgat agcggatgta
     7021 ttggcggagc tgaaatccca aggtgtaggc agattgcttg cgattcccct gtatccgcaa
     7081 tatgccgctt ccagcagcgg agcggcggta gataaagtgt gcgaacaact gctgctgcaa
     7141 cgcaaccaaa tgagcgtccg caccatttcg cgcttttatg atgatgccgg ctacattgat
     7201 gcgatgaaaa accacatcct ccgatattgg gcggaacacg ggcgtgggaa aaaactgatg
     7261 ttgagttttc acggcgtacc gcagaagcac tacgacctcg gcgaccccta tcccgacgag
     7321 tgccgccaca ccgccaaact gcttgccgaa gcactggaac tgaccgaaga cgaatatacc
     7381 gtatcgttcc aaagccaatt cggcagggca aaatgggtta caccgagcac gcaggatttg
     7441 ttcggcaaac tgcccaaaca gggggtaacc gagctggacg tattctgccc gggctttttg
     7501 gcagactgct tggaaaccat ggaagaaatc gccctgatgg ggcgggaaca gttttatgaa
     7561 gcgggcggaa aaaactaccg ctacatcccc tgcctcaacg acaaccccga ctggatagac
     7621 gcactcgtcg cacttgccga agaaaacctt ggcggctggc gttgaaactg tttgagccat
     7681 gtctaaaatg ccgtctgaac gccgtgttca gacggcattt tcccgctact ttagcgtatg
     7741 atggcatcta tgccggacag cacatcaagt gcaaccttac taccgattcg gcaaaaaaac
     7801 ctttcacccg ctacgcaaaa tcaacaacaa ggtttcaaac attaaggaaa cgccaatgaa
     7861 cacaacccga ctgccgaccg ccctcgtctt gcacttcctc tgcgccgccg cttctgccgc
     7921 cgacaacagc atcatgacaa aagggcaaaa agtgtacgaa tccaactgca tcgcctgcca
     7981 cggcaagaaa ggggaagggc gcggcactgc gtttcctccg cttttccggt cggactatat
     8041 tatgaacaaa ccgcacgtcc tgctgcacag catggtcaaa ggcatcaacg gtacaatcaa
     8101 agtcaacggc aaaacctaca acggattcat gcccgcaacc gccatcagcg atgcggacat
     8161 tgccgccgtc gccacttata tcatgaacgc ctttgacaac ggcggcggaa gcgttaccga
     8221 aaaagacgta aaacaggcaa aaggcaaaaa aaaccaaaca gacaaaatgc cgtccgaaac
     8281 cggcaatccg gcttcagacg gcattcaaat caaacctttc taacgcggta ctttcagccc
     8341 catagacccg atattgccgc caccgtcaac ctccttcgcg gtcagcataa agccgccgat
     8401 gtcaatacgg tcgccctcga ccggctcctg actgtcggaa cgcttatcga aaagctcggc
     8461 aaggctcaaa ccctcttcgc ccgcttccag cttcaaaccg taagcaagtg ccaaatcgcc
     8521 cgaacgtgct gccggcgaaa cgacaaactc accgaagaaa tcaaaatttt cacggacgcc
     8581 gatacccgtc tcggtaaagt atttcgccat tttatcgacc ttgccgtcgg gcaggatgta
     8641 ccacgccaaa tcctccgcct gaagcacggt gtcggactgc atttcgattc ggctgccgtt
     8701 gcgtatcaat gcgaaacagc gtgcgtcaaa cgaatcggaa atcggttcga ccgtatcggg
     8761 atggtgtccc tccgcttcag attcggcaac cactttaaac gccgacattc tgacaatttc
     8821 cttttccgcc agccaaatat catgcgtatc tttcggttcg ggcttgttgg gcatggcaac
     8881 cttcaacagc cgcgccatca caggaatcgt cgttccctga atcagcagcg acagcaccac
     8941 cacggcaaac gccacatcaa acagcaggtg cgaattggga acgcccatca ccagcggcat
     9001 catcgccagc gaaatcggta cggctcctcg caagcccaac caactgatat acgccttttc
     9061 acgcaggctg taattgaatt tccacaaacc gccgaacact gccagcggac gcgcgaccag
     9121 catcaggaac gccgcaatcg ccaaggcttc cgccgccctg tccaacacgc cggcgggaga
     9181 aaccagcaga ccgagcatga cgaacaaagt tgcctgcgcc agccaagcca aaccgtccat
     9241 cacacgcaaa acgtgttccg tcgcacggtt gcgctggtta ccgacaatga tgccggcaag
     9301 gtaaaccgcc aaaaagccgc tgccgcctat ggtattggta aacgcaaaca caagcagccc
     9361 gcccgacaca atcatcagcg cgtacagacc ttccgcaaga ttcagacggc gtaccagctt
     9421 tgccaatatc tttccgcccg cccaacccgt cagcagaccg aaaccgattt gcagcgcaag
     9481 catccggaca aacgctgccg cacccgattc cgccggctgc ataatcatgg taatcagtgc
     9541 cgtaaccaaa aaaaccgcca tcgggtcgtt cgcacccgat tcgatttcca aagtcgcctg
     9601 cacccgttcg ttcaaacgca cgccgctgtt gcgcaaaagg ctgaataccg cgccggcatc
     9661 ggtcgaaccg acaatcgccg ccatcagcac gccgaacttc caatccaaac cgagataaaa
     9721 agttgcaaac agtcccagcg gaagcacagt ggcaaacacg ccccacgaag cgagtaccga
     9781 cgcgggcttc aacgcaatcc gaaaactgga aagctgcgtc cgcaaaccgc cgtcgagcag
     9841 aataaccgcc aaagcaagct ggctgatgaa attcgccatc acgacattat tgaaggcaat
     9901 gccgccaacg ccttcctcgc ccgccagcat gccgacggca agaaacacca gcagcaaagg
     9961 cattcccaaa cgtgcggaca aagtggtcga aaccacgctc aggaacaaca gtgcgccacc
    10021 cagcagaaac aggctgttca tccaatccac gccaacggct cccccttaaa attcatgaaa
    10081 ttagaatcga aagattgtaa cacggcattt tcttctcacg aaactttatt tcatgtccgc
    10141 caccgccttc agacggcatt ttcctgtttc atgccgcctg ataccgccca aacccgcgtt
    10201 ctcctatata atgtcggact ttgcgccgca tttcaggatt ttttatggca tttgcctcac
    10261 tatttactct gccggactac atcgccgccg ttttggacga tgttgccctg atgaccaaag
    10321 ccgccgcaaa gaaaaccgcc ggcgtggccg gcgacgattt ggcacccaat gccaaccggg
    10381 ttacaggcgt atcggcagaa cgcgagttgc cgattgtttg gccggtggcg aaaggttctt
    10441 ttgccaacaa gccggttttg gtgtctgcgg ctctgctgct ttccgccttc ctgccgcaac
    10501 tcattacgcc gcttttgacg gcaggcggga tttatttgtg ctttgagggc gtggaaaagc
    10561 tgctgcacaa gtttctgcac cgacatgacg cgcacgatga cggcggcgaa acggcggtta
    10621 acgagcaggc taaaatcaaa ggtgcaatcc gtaccgactt tatcctgtcc gcagaaatca
    10681 tcatcatcgc gctgtgcgtg gtcgaacaat acagcctgat gacgcgctcg ctcgtgatgg
    10741 cggcaatcgg catcggcatg actgttttgg tgtacggaat cgtcgccgtc atcgtcaaac
    10801 tcgacgactt gggcatgctg ctgatgcgcc gcccacaacc tcggcctttt gcacgatttc
    10861 ctgcacgcgc aacactggaa cgctggctgg acagagtatt ccgccaacct cgttgtcggg
    10921 ccgctttccg gttcgattgc ctgcgccccg ccttgtcgct gatgaatcgt ttcggcaggc
    10981 attgattcct tttttcaaat accgatgccg tctgaaagac gttcagacgg catcttccga
    11041 acagacagac gaatatgttt tccaaactgg acaaatactg gcagcacccc gccctctact
    11101 ggcctttgct catccttttt gccgccgcca cccccttcgc cttcgcaccc tactaccact
    11161 tttggctgat gcccttgatt ttcggcgcct tcgtccgcct catcgaactg cgtccgcgtt
    11221 ttgccgcctc ttccgcctac ctgttcggtc tgaccgcata cacggcacag ttctactgga
    11281 tacacactgc cctgcacgac gtttccggcc tgcccgacct ctatgccgta ccgctgacct
    11341 tcctgctgcc cgcctacctt gccctttatc cggcactgtg tttctggctg tggaaaaaat
    11401 ttaccctgcc ccagggcata aagaccggtc tggtactgcc catcctgtgg acgctgaccg
    11461 agtttgcccg cgagcgtttc ctgaccggat tcggctgggg cgcaatcggc tactcccaaa
    11521 tcaccccgga cagcccgctg gcgggtttcg cccccttggg cggcatccac atggttacac
    11581 tggcaaccgc ctttctcggt gtctggctgg ttttggcgat cgacaacacc gcacgttcgg
    11641 gcaaacgcct gcttccggcc attctgattg ccgccctgct tgccgcaggc tacaccgccc
    11701 aacaaaccga cttcacccgc cccgacggca gccgcagcac cgtcgccctg cttcagggca
    11761 acatcgccca aaccctcaaa tggcgtgaag accaagtcat cccgaccata cagaaatatt
    11821 acgaacaggt cggcaaaacc actgccgaca tcgtcatcct gcccgaaacc gccattccca
    11881 tcatgcgcca aaacctgccg gaaaacatac tggcgcaatt cgccgaacag gcgcaaaaca
    11941 acggcagcgc gctcgccgtc ggcatcagcc aatacacttc ggacggcaac ggttacgaaa
    12001 acgccgtcat caacctgacc ggctatcagg aaaacaatca ggacggcatc ccttactacg
    12061 ccaaaaacca cctcgtcccc ttcggcgaat acaaaccgct gcccctcctg accacaccgc
    12121 tttacaaaat gatggacatg cccctttccg acttccgcaa aggcggcggc aagcaatccg
    12181 ccatgatgat gaaaaaccaa aaaatcgcct tcaacatctg ctacgaagac ggattcggcg
    12241 acgaactgat tgccgccgcc aaagacgcca cactgcttgc caatgtcagc aatatggcgt
    12301 ggtatggaaa atccaacgcc atgtaccagc acctccaaca atcgcaggcg cgggctatgg
    12361 aactcggacg ctatatggtc cgcgccacca acaccggcgc aaccgccatc atctccccca
    12421 aaggcaacat catcgcccaa gcccaacccg atacggaaac cgtattagaa ggacacatca
    12481 aaggctacat cggcgaaacg ccctatatga aaaccggcag ttcatggtgg ttgatgggca
    12541 tattgaccct agccgcactg attcttttca tcttccgaaa caaagaacac tgatacctgc
    12601 acagtccgtc cggacgggct gtcttttttc aaaccggccg tttacataca accacgtatg
    12661 taatataatt ctaaaatcga attgagctat caggtttaca aaatcaatca aacttgcctt
    12721 acaaaatttt cctgtctttc aaaccttagc gtatatctcc tgccaaacat acaaaataca
    12781 agccaagcag tgatatactg catcccaaca caccaaaccg ccgatacgca gtttcagccg
    12841 aaaggaaatg ccccaaatga ataacgcttt cgcattaccc gccatccaaa gcggcaacgg
    12901 cagcctcgaa caatacatcc acaccgtcaa cagcatcccg atgctgtccc aggaagaaga
    12961 aacccgcctc gccgaacgcc ggataaaggg cgacctcaac gccgccaaac aactcatcct
    13021 gtcccacctg cgcgtcgtcg tttccatcgc gcgcggctat gacggctacg ggctgaatca
    13081 ggccgacctg attcaggaag gaaatatcgg tctgatgaag gcggtcaaac gctacgagcc
    13141 cggtcgaggt gcacgcctgt tttcatttgc cgtgcattgg attaaagcgg aaattcacga
    13201 attcatcctg aggaactggc gccttgtccg cgttgccacc accaaaccgc aacgcaagct
    13261 gtttttcaac ctgcgcagca tgcgtaaaaa ccttaatgtc ctgtctccca aagaggcaca
    13321 agacatcgcc gacgatttgg gtgtcaaact ttccgaagtt ctggaaatgg aacagcgcat
    13381 gacgggacac gacatcgcca tcatggcaga caacagcgac gacgaggaca gtttcgcccc
    13441 catcgactgg cttgccgacc acgattccga accgagccga caactatcga aacaggcgca
    13501 ttacgccctg caaaccgaag gcctgcaaaa cgccttggcg caattggacg acaggagccg
    13561 ccgcattgtg gaaagccgct ggcttcaaga cgacggcgga ctgacgctgc accagcttgc
    13621 cgccgaatac ggcgtatctg ccgagcgcat ccgccagatt gaagcgaaag ccatgcagaa
    13681 actgcgcggt ttcctgaccg aagaagccga agcggtttga aatatacaca ataaaatacc
    13741 cgacaaaaca atttgtcggg tattttattt ggtaaacatc aatgcggttt gtgcgtcgtg
    13801 ccgtacacga ttttatccgc ccaagccatc gcaatcgcca aaatcaaaaa gcagacatgc
    13861 accagacact gccacatcag ctgcttttcc gacagattgg cggaattgat aaatgtttgg
    13921 agcaaatgga tggatgaata ccgataatcg acatcgacag ccttaccttc aataccggtg
    13981 cattcacatg gctcaaccac tcgggccggt caggatggtc gtcgatacgc aaccgggata
    14041 cgaacgactc atacccgcca atctgcacca tggtcagcaa attcgcaatc ataaccacat
    14101 caatcagatt taaaacagcg agcatgatgg cgttttcgtc cgacacatcc aaattcatga
    14161 ccagatgctt caacgatttc aaaaacttat aggcacaaat cgcccgtaca acagtcagcc
    14221 ccgcataaat cggcacttgc agccaacggc ttgcaaaaat cattttggca aaaaacccat
    14281 agcctgttcg ggttttggag attttgcttg atacatttcc cttccttgca gcaacaaaag
    14341 cgcgtgattc caatctaccg ctgcgaaatc ttcaattttt cacacccgaa aacgcttgcc
    14401 gccatacaga tgtgatatat tgattccatt ttaacgaact tcggagaacg acatgagcag
    14461 cggaaatatc cgcatccaca gcatgaccgg ctttgccaac gcggcggcag agtgcggcag
    14521 caaacgcatc aacctcgaca tccgcgccgt caaccaccgc tttttggaca ttcaaatcag
    14581 gatgcccgac gatttgcgcc atttggaaaa cagcatccgc gagcagattt catcccatct
    14641 ggcgcgcggc aaagtcgaat gcaaaatcca aattcaagat gcggaaaacg gcaatcagtc
    14701 tttggaactg aatcgcgttc tggtcggaca gcttgccgaa atcaacaaaa acctccgcaa
    14761 acattatgat ttggcaaaac tgggcgttgc tgatattttg cgctttccgg gcgtattggc
    14821 aagccaaaag gaaaatacgg aagcattggc gaaaaccatt gtcgaactgg ccgacaaagc
    14881 actaaaagac tttaccgccg cacgtcggcg tgaagggaaa aaattgggcg aacacctgtt
    14941 acaacgcatt aaaaacatgg aagaaatcat cgatgctttg agcgaaatct tccccgcgct
    15001 ggtggaagcg cataaagaaa aaatccgcac ccgccttgcc gaagccgtcg gcagcatcga
    15061 caacgacagg ctgcaacagg aatttgccct ctttatccaa aaatccgaca tcgacgaaga
    15121 attcagccgc ctgcgcaccc acattgccga agtgcgccgt atcgttaccg aacacaaagg
    15181 cagcagcggc aaacggttgg acttcctgat gcaggaactg aaccgcgaag ccaacacttt
    15241 gggcagcaaa tccatcgcta ccgaatgcac ccaagcctcg gtcgagctga aagtcctgat
    15301 cgaacagatg cgcgaacagg tgcagaatat cgaatagccc tgcctttctc tccaaacatg
    15361 acaatgccgt ctgaaacttt tttcagacgg cattcttgat cggctgaaaa cctctgttgc
    15421 aagcaattca agattgttct ttcacatcca ccaacctcgt tccggcaagg aagtcataca
    15481 gaaactgccg gtcgggattc agcagggcga acccccacgg caaaatcagc caaaccaatg
    15541 ccgcgccggc cgcgcccttg ggcggaatgc cgaggaagtg gcgcaatccg gcataagcaa
    15601 gcataggaat gaagacgatg aatatgcacg cccaaataaa gcgcaggcgc agcaggtgca
    15661 aagacggctg tatgccgtta aggtcgcaca agccgatttt ccatgtcctc atcgccaagg
    15721 tctgcccctg accgtgccag ttggcgcgga aataaagcca ccatgctccc attatcagga
    15781 tactcgttac caatgcagaa accgcgatag aaacgggatt cagaaaaatg gcggcaatac
    15841 cggcaagcaa tgctgccaaa caggtcgccg caccgaccag cagcatctca tacagtatgg
    15901 cggcaaagcg gcgtttgagc ggggcggttt tcagtatcat catcttttca atcggaatat
    15961 gccgtctgaa acgccaacag acttcagacg gcatttgtgc aaagatgcct tgcggcggtt
    16021 aacggtgcgg acgtttctga ccgcgcgact gttttgccgc catttgattg atttcctgac
    16081 gtgtcgggcg ttttttgaac atagcgtgcg cctcgtccac cgaacatttt tgcgacaggc
    16141 agatcagggt aatcgcatct ttctggtgtt gtccgccgct gtggtacata cggcgcaggt
    16201 ttgcctcgtt gattctgcct ttttcgggat cgatgtcgaa ttttttcaga cgttcgataa
    16261 actggcgttg ctgtcggcgg gatgtccaaa caaagccgcc cgcagcggcg gcgacgatga
    16321 cggcggcaag caggatggca agcggccagg aatcgacaat caatacgata atgaggctta
    16381 aaacggcggt ggtcagtaaa atcaggccgc ccaagcgcag tttggtctta ttgtccatag
    16441 ggttgatgtt cctttattga ggtggtcgtg ccgtctgaaa tgttttcgga cggattggtg
    16501 aatacttttc aggattaacg gtattttaca gtattttcgg attttgggga ttaccgcttt
    16561 attccgccag cgacacgaca agctgtttga ataccgtcca tgcgtcgccg tcttccgcgc
    16621 ctttgatgat tcggtcgatt tgggcgcagg ttttgagcgc gtcaagcagg cggacgacgg
    16681 aaatccgctt gaccgcaagc ggtgcgagcg tctgtttgtc gccccaaagc ctgaggctgt
    16741 tgcggacgga ttggatgctc tgcccctgtt tcagggcagc ggcaagccga atcagcgtcc
    16801 gcacgtcttc ggcaaccgcc cacagaagca gcaccggttc ttcgccttct tcctccaacc
    16861 cgtccaacag cctgcatacg cgcgggacat cgcccttcat ccacgcgcct gccagttgga
    16921 acgcgtcgaa gcgggcaaca ttggcaacgg cggtttgcgc ctcatcgata ttgacggcat
    16981 gccctttcgg atacagcagc gcgagcttgt cgatttcctg acgtgccgcc aacagattgc
    17041 cttccacgcg ctcggcaaac agtgccaatg cgtctgcctc gatacccaaa ccgattttgt
    17101 ccagccgtcc gcgtatccat tggggcaaag ccgccgcacc gaccggtttg gcttcccaca
    17161 cttccccctt tgccgccaat gcggcaaacc atttggactg gagccgggtt ttctccagtt
    17221 tgggcagcaa aaccagcgtt accgtatctt ccggcagtcg ggcggcaaaa tcctgcaatg
    17281 cctcgccgcc gtttttgccg ggttttccgt tggggatatg caattccaac agtttcaaat
    17341 cggcaaacag acccgcattg cctgcggttt gcagcagttc gttccaatcg aaagacgcgt
    17401 cggcggtata ggcttcgcgg ttgagataac cctgcttctt cgccgccgcc ctcaatgcgt
    17461 ccactgcctc gatacgcagc agttcttcct cgccgtggat gacgtacaga ggtttcaaag
    17521 gcgcgtccgt atcgatgcgt ccgatatgtg ccgccacgtc attccgcctt cagaaaggtc
    17581 aggcggcgga caatctgttt ggcaacatcc tgccgcattt ccgcccacag ggtttcttct
    17641 tcttcctgtt tgcccaaaat ttcgttgtcg gcataatcca aaatgcggcg gacggacacg
    17701 gtcatcggtt tgccgaccgg ctcgccgcgt ttcaatacct gcgcttcaac cgtcaatatc
    17761 aaaagatatt cgttgatgac tgccgcacgg gtaacggtat aggtttcctt gttttgggaa
    17821 acgctgtcta tacgcagggt catctgcgcg ccggcagcat cgtccaccct gcccgaagcc
    17881 tgatacagcg cggtttccaa aggaaactgc aatgcctgtc cgccttcgat gtgccagctc
    17941 cggtaggtca gcggcggaga aatgccgtct gcacctttca ggtggaaacc gcacgcgccc
    18001 agcaccaagg ctgcggcagt aaggaatatt ttgttcatcg cttgcctttc tcaaaagcat
    18061 aaagtcggta gattatatca gcggcgtgtt cagacggcat tgccgtccag ccaaatcagg
    18121 ctcgccatac gccccgtcgc tccgtcgcgg cggtaggaaa agaaaatatc ccgttccaaa
    18181 accgtacaat gcgtgccgcc gtacacgccg cccacgcctt cgcgcctcag aatcaggcgg
    18241 gcgagcgcgt agaggtcggc aaggaatttg ccgccgccga taggttcaaa tgcagcagcg
    18301 gcttcgggca tggacgtgca gaacgcatca aacacgtcct gcccgacttc aaacgcatcc
    18361 gcactgatgg cagggccgag atacgccata atttcgacag gcggaacctt catcgcggca
    18421 atggtgtttt gcaatacgcc gcccgccaaa ccgctccagc ccgcgtgtgc ggcggcaacc
    18481 gccgtacctg ccctgtcgca aaatagaacg ggcagacagt ctgcagtcat cacggcacag
    18541 acggctttac ccgtgtcgtc cacggaagcg tcggcatcgg gcgtgccgtc caatgcttcg
    18601 gcagcattga cgacaatggt gctgtggatt tgattgagat aggcaacggg caatccgacc
    18661 tgctgttgca cgatttcgcg gttgcggcgc acggtttcag ggtcgtcgcc gacgtgcgta
    18721 ccgaggttca aactctgata cgcaccttgg ctcacgccgc cgttgcgcgt ggtaatcagg
    18781 gttttcacat tggcgggcgc gggccaatcg gcggtcagga agtttttgcc tttcggggcg
    18841 agatttaggg tttctgtgat ggttttcatt ggatattgga ataggtgtgc ggcggaaagg
    18901 gttgattaac tgccttcggg gcaaatggat gcttgttttt tcgtcattcc cgcacaggcg
    18961 ggaattcgga gattcgggat tgttttcaaa cgttcgggtc ggattcttgc cggtgcggga
    19021 atgatgccct tatatacttt ctccgagctt tatatgcttc aacaggggac ggcacatcaa
    19081 gcaccgcact gcgtgttgcc cgaacgaggc tgccctccga ttagattcta tcgctataaa
    19141 cagacgggtt tcaaccgaaa aggaatgggg ataaagtcca tttccgacac ctctcgggcg
    19201 atgccgtctg aaaaccaatc tccactttca gacggcattg tttaggcgcg gtcattttgc
    19261 aaattaaggt taaggcgtgt atgcttgcct tcccttaaaa acaaacacgc aacgcattat
    19321 tatgaatatc ctcagtaaaa tcagcagctt tatcggaaaa acattttccc tctgaacctc
    19381 gctctttgcc gccgccgctt ttttcgcgcc cgacaccttc aaatgggcgg ggccttatat
    19441 tccttggctg ttgggcatta ttatgttcgg tatgggtttg acgctcaaac cttccgactt
    19501 cgatattttg ttcaaacatc ccaaagccgt catcatcggc gtaatcgcac aattcgccat
    19561 tatgccggca accgcctggc tgccgtccaa actgttgaac ctgcctgccg aaatcgcggt
    19621 cggcgtgatt ttggtcggct gctgcccggg cggtccggct tccaatgtga tgacctatct
    19681 ggcgcgcggc aatgtggctt tgtcggttgc cgttacgtct gtttccaccc tgatttcccc
    19741 attgctgact cccgccatct tcctgatgct tgccggtgaa atgctggaaa tccaagcggc
    19801 cggtatgttg atgtccatcg tcaaaatggt tttgctcccc attgttttgg gtttgattgt
    19861 ccataaggtt ttgggcagta aaaccgaaaa gccgaccgat gcgctgccgc tggtttccgt
    19921 tgccgccatc gtgctgatta tcggcgcggt agtcggggca agcaaaggca agattatgga
    19981 aagcggcctg ctgatttttg cggttgtcgc actccgcaac ggcatcggct acctgctcgg
    20041 cttctttgcc gccaaatgga ccggcctgcc ttatgatgca caaaaaacgc tggccatcga
    20101 agtcggtatg caaaactcgg gcctggccgc cgcgcttgcc gccgcacact ttgccgccgc
    20161 gccggtcgtt gccgttccgg gcgcattgtt cagcgtgtgg cacaatatct ccggctcgct
    20221 gctggcaact tattgggcgg ccaaagccgg taaacataaa aaaccctaaa cgcctttcat
    20281 cataatgccg tctgaacggg gcaaccgaaa ccggcggttt ctgcccggcc ccttcagacg
    20341 gcctttgttt gaaatcggcg gggacgattg cccggctgct ccggttcggc tgcctgcgtt
    20401 cgccccgcct ttcaagccgc ctcactccct tacataaacc acttcgacat cgtagtcgtc
    20461 ttcgttccaa tcgtcatcgt cgtccgcgcc gaatttgtcc tgccattcct cttcattgct
    20521 caaagacgaa tccaaaccgg cttcaagacg gaggacggac aacaaatgat atatgtcgtc
    20581 cggaatcggt gcctcaaacg aaacggtttc gccgctttcc ggatgggtaa aactcaagcg
    20641 gtaggcgtgc aacgcctgac gcgcgcccaa acttttaacg gcttctttca ccgtgtcgcc
    20701 gcacggatgg cgcgggttgc cgtaaaccgg gtcgccggca agcggatggt tggcctcgcg
    20761 catatggacg cggatttggt gcgtcctgcc cgttccgagc gagcattcga tgtagctgtg
    20821 ggcaagatag cgttccaaca ctttgacgtg ggttacggca ggcttgccgc cgaatttgac
    20881 ggctgccatt ttcaggcggt tgtgcggatc gcgtccgatt tgggtttcga ttttaccgtc
    20941 aaaggggacg atgccgttgg cgacggcgcg gtagatgcgt ttgaccgtgc gttcttgaag
    21001 ctgcctcacg agggaatttt gcgccggcag ggttttggca accaccatca gcccgctggt
    21061 ttctttgtcc aaacggtgta cgatgcccgc gcgcggaatt tgggacagct cggggcaatg
    21121 cgccaacagg ccgttgagca gcgtccccgt ccagttgccc gccgccggat gcaccaccag
    21181 tccggccggt ttgttgacga cgatgacggt atcgtcttcg taaacaatat ccaaatccat
    21241 agactccgga acaaacgcca gattttcctc actcggacgg acggttacac aaatttgctc
    21301 gccgcctatc attttgtctt tgggttgcga aggtttatcg tttacaataa ccgcgccttc
    21361 tttaatccat gatgtcaggc ggctgcgcga atagtcgggc agaagtttcg ccaacaccgc
    21421 atccaaccgc ccgccggcaa gctcgagcgg aacggtcaga ccgatacggt tttcagttcc
    21481 ggaagctgac gcaaagtctg aatcgtcgct ataatcggat tcattatcaa aggaagtatt
    21541 ctgcatgaaa aaaattcttt taacggtttc attaggtttg gcactgagtg cctgtgccac
    21601 tcaaggtacg gccgataaag atgcccagat tacccaagat tggagtgtgg agaagctcta
    21661 tgccgaagcc caggacgaat tgaacagcag caattatacg cgggctgtca agttatacga
    21721 aatcttggaa tcgcgcttcc ccaccagccg ccatgcccgg caatcccaac tggataccgc
    21781 atacgcctat tataaagacg atgaaaaaga caaggctctg gcggcaatcg aacgcttccg
    21841 ccgcctccat ccgcagcatc cgaacatgga ttacgcgctg tacctgcgcg gcttggtgct
    21901 gtttaacgaa gaccagtcct tcctgaacaa actggcatcg caagactggt ccgaccgcga
    21961 cccgaaagcc aaccgcgaag cgtaccaggc gtttgcggaa ctcgtccaac gcttcccgaa
    22021 cagcaaatac gccgccgatg caaccgcacg catggtcaaa ctggtcgatg ctttgggcgg
    22081 caatgaaatg tcggtggcgc gttactacat gaaacgcggc gcatatatcg ccgccgccaa
    22141 ccgcgccaaa aaaattatcg gcagctatca aaatacacgc tatgtcgaag aatcactggc
    22201 catattggaa cttgcctaca agaagttgga caagccccag cttgccgccg atacgcgccg
    22261 cgtattggaa accaacttcc cgaaaagccc gtttttgacg cacgcttggc agcccgacga
    22321 tatgccctgg tggcgttact ggcattaagc ccatcctcga aatgccgtct gaagcccttt
    22381 cagacggcat tttccgttcc ggcaccagcc ttcccgttca ctcaaacggt tttttctgcc
    22441 aatagaattt atacactctc aaacgttgag cctttacgcc tccgcgtccc aagccgaatt
    22501 gcagcgcgcc cgacaaatcc gtccgcaaca acttgatgcc gtgtgcgcgg acacggttct
    22561 gcaccgcttc ggtcggatgc ttgtaggcgt tggcataacc gcttgaagca acggcatatt
    22621 cgggcgaaac ggcattgagg aacacgcccg acgaggacgt attgctgccg tgatgtccca
    22681 aaaccaaaac ctggctgtac aggtttgagc cgtatttttt aaccaactcc gcctcacctt
    22741 tcgtatccaa atctcccgtt accagcagtg ccgcaccgcc cgccacaaca cgcaaaacac
    22801 aacttttccc attatcatcg atatttttgc gttcagacgg cctcaaaaac tcgaaatcca
    22861 cgccgtccca ttgccaacgc tgttccgcac aatgccgcgc cccctcataa aattccggct
    22921 gtccggcata aatcccgccg ttcggtatct tgccgactgc ctgaaagccg ccgtcgtggt
    22981 cgctgtcgtg atgcgacaga accagcttgt ccaaacggcg gacacccgcc gcattcaaac
    23041 tcggcacgat acccgtttgt gccgccgcta ccgttcccgt atcgaaaagc agatggcggt
    23101 ttgccgtccg cacaagcacc gacaagccct gccccgcatc ccaaaccgta accgcagctt
    23161 cgttttcagg tactgcttca ggacggtagg atacaaaccc tgccaacagc aacaccgccc
    23221 acggacgcaa acccaagccg cgcggcagca gcaacagcaa agcggcacac accgccaaca
    23281 ccagcagcgg caaaggtgcg gcggcaacgg caaactcagg cgacacatcg gcaagccaca
    23341 ccaaaaaccg caaagtgtat tccgccaaaa atgcccccgc ctgctgaagc ggcgcaaacg
    23401 gcacgaccga acccagcaac gccagcgggg tcaacaccca agaaaaccac ggtatcgaca
    23461 ccgcattgac caaagggctg accaaaggca gcgaggcaaa cagataaccg agcaaaacca
    23521 gagacaacac cgaagccgcc cactgcccgc gcacggcggt ttgccgtttc ccctcgtaca
    23581 aacgccctgc acacgcccat atcagggccg ccaccaaacc gaaagacagc caagtaccga
    23641 cacccaaaac cgccaaaggg tcgaacagca gcaccgccgc caacgcctgc caccacgtcg
    23701 cccacgccga cagtcttccc ctgcgccacg cccacgcgaa cgccgccaac atcaaaacac
    23761 tgcgctgcgt cggcacggaa aaaccggcaa gcagcgcgta aaacagcgcg cccgcacacc
    23821 ccgccgccaa aacccacgcg cgcggccggg cgggaaggcg cggggaacag gcaagcagcc
    23881 gcttcgccag ccacgcaaac agcaccgcca ccatcgtaac gtgcaaaccc gagatactga
    23941 ccaaatgcgt cagccccaac ggccggaacg cctgccacaa tccggggcgc aatgccgact
    24001 gttcgcccac gctcaacgcg cgcatcagcc cgatgccgtc tgaaagcccg ccgtccgcat
    24061 ccgcctgccg ccaattgcgg ctgatgcggc tgcgccaaac cgcaatcccc caaccgcttc
    24121 cgccatgcag caaaaccctg tccgcaccga ccgtccccac gccgcctacc ccgttggata
    24181 atgcccacgc ctcacggttc aaaccgcgca ggttcaactc cccgacgacg gggtgcacgc
    24241 gtgccgttat ccgccatctg ctcccgaccg cccattcgcg ccgtttgtag tccgacagca
    24301 gcaaatcaaa cgtccgaccg ccgctgtcca cagcctttgc cgcaaactgc acgcgccgcc
    24361 cgtccgacct cggcatatcc gccacttcca ccgtcaaagg cacgcctgaa accgcctccg
    24421 cccgccattg cgaagacagt gccgcttccg ttctgaatac gccgtaagcc gcgcccgcca
    24481 acacgcacag catcagaccg gcaaacgcaa aacgccttgc aagcacagcc aaaaccgcaa
    24541 aagccgccaa ccaaaacggc caatgcggta caaccgacag tgcgaacgaa actgccacgc
    24601 cgacaaccca acacggcaaa aaccaacgac ggaacacgtc tccccactcc cgatataaaa
    24661 aacaaacgat gataaagcaa agccataaaa ccgtcataac aagatttgaa aatgataaga
    24721 atgcaaacga aaagcctcag tattatccga gacaacggca aactttccat cgtcattccc
    24781 gcaaaagcgg gaatccaaag acaaaaagcc gcagaaattt atcggaaaga accgaaccac
    24841 aaaaaccggc ttcccacctt cgcttgaata acagaacaaa gaaagcggaa ataaaaacat
    24901 caggattctt ttttaaattg gcaataaaac accaaaatga atgagttaca caaaaaaata
    24961 ctcaacacca cccaaccggc gtaaaatgca aaacattatc gctattaaaa cggtaaaacc
    25021 ttatgaaagc caaacgtttt aaaattaacg ccatatcctt atccatcttt cttgcctatg
    25081 cccttacgcc atactcagaa gcggcattgg tgagagacga tgtcgattat caaatattcc
    25141 gtgactttgc agaaaacaaa ggcaaatttt ttgtcggcgc aaccgattta tcagtgaaaa
    25201 acaaacgagg tcaaaacatc ggcaacgcat tatccaacgt accgatgatt gattttagcg
    25261 ttgcagatgt caacaaacgc atagcaacgg tagtcgatcc ccaatatgcc gtcagcgtca
    25321 aacacgccaa agcagaagtc catacttttt attacggcca atacaacggt cataatgatg
    25381 tagccgacaa agaaaatgaa taccgcgttg tcgaacaaaa taactatgaa ccccataaag
    25441 cttggagtgc gagcaattta ggccgcctcg aagattataa tatggcgcgt tttaataagt
    25501 ttgtaaccga agtggcaccg attgcaccaa ctgatgccgg cggcggattg aatacctaca
    25561 aagataaaaa ccgtttttcc tcttttgtca gaatcggtgc gggcaggcaa ttagtttatg
    25621 aaaaaggggt ttatcatcaa gaaggaaatg aaaaaggcta cgatttgcgc gatctttcac
    25681 aagcctatcg ttatgccatt gcaggtacgc cttataaaga tattaatatt gaccaaacaa
    25741 tgaataccga aggtttgatc ggctttggta atcataataa acagtattcg gcagaagaac
    25801 ttaaacaagc actttcgcaa gatgcgttaa caaattacgg cgtgttgggc gatagcggct
    25861 ctccgttatt tgcttttgac aaacaaaaaa atcaatgggt ctttttggga acttacgatt
    25921 attgggcagg ttacggaaaa aaatcatggc aagaatggaa tatctataaa aaagaatttg
    25981 cagataaaat caaacaacgc gataacgccg gcaccgtcaa aggtaatgga gaacatcatt
    26041 ggaacattac ttctggcaca aacagcaaga ttggctctac agcggtaagg cttgccggca
    26101 atgaaaggga tgcaaacaac ggacagaatg ttacctttga agacaacggc actttggtat
    26161 tggatcaaaa catcaaccaa ggcgcgggcg gcctgttttt caaaggcgat tacacagtca
    26221 aaggcgcaaa taatgacatc acttggttag gtgcggggat tgatgttgcc gacggcaaaa
    26281 aagtcgtttg gcaagtcaaa aatccgaatg gcgacagatt ggcaaaaatc ggcaaaggca
    26341 ctttggaaat aaacggcaca ggcgttaacc aagggcaatt aaaagtcggc gacggtacgg
    26401 ttattctgaa tcaacaagcc gatgccgaca aaaaagtcca ggctttctcc caagtcggca
    26461 ttgtgagcgg acgcggtaca ttggtgctga acagtccgga ccagattaac ccgaataatc
    26521 tgtatttcgg tttccgtggc ggtcgtttgg atgccaatgg caataacttg acttttgaac
    26581 acatccgcaa cgtggatgaa ggcgcgcgca ttgtcaacca caacacagac cacgcctcca
    26641 caatcacact aacgggtaaa tctttaatta ccaatccgaa cagcctttcg gtacatagca
    26701 tacaaaatga ctatgatgaa gatgattata gttattatta ccggccaagg cgacccatcc
    26761 cacaaggcaa agatctttat tacaaaaact atcgttatta cgccctaaaa tccggcggca
    26821 gcgtgaacgc accaatgtcc gaaaacggtg cggcagaaaa taacgactgg gtctttatgg
    26881 gatatacgca agaaaaagcc aagaaaaacg cgatgaacca caaaaacaat cagcgtatta
    26941 gcggttttag cggtttcttt ggcgaagaaa acggaaaagg acataacggc gcattaaacc
    27001 ttaatttcaa tggcaaaagc gcgcaaaacc gtttcttgtt aacaggcggc gcgaatttaa
    27061 acggaaaaat aagcgtaact caaggcaatg tcttgttatc aggtcgtcca acaccacacg
    27121 caagagattt tgtgaacaaa tcttcagccc gaaaagacgc acatttttcc aaaaacaatg
    27181 aagtcgtatt tgaagacgac tggataaacc gcacattcaa agccgcagaa attgcggtta
    27241 accaatccgc atcattctct tccggcagaa atgtatccga catcaccgcc aacattaccg
    27301 caacagacaa cgccaaagta aatttgggtt acaaaaacgg cgatgaggtt tgcgtgcgct
    27361 cggactatac cggttacgtt acctgcaaca caggcaactt atccgataag gctttaaaca
    27421 gctttgatgc gacacggatt aacggcaatg tgaatttgag tcagaatgcg gcattggtct
    27481 tgggcaaggc tgcattatgg gggcaaattc aagggcaagg aaacagccgt gtcagcctaa
    27541 accaacatag caaatggcat ttgaccggtg acagccaagt acacaatctg tcattggcgg
    27601 atagccatat tcatttgaac aacgcttccg atgcgcaaag tgcaaataaa taccacacga
    27661 tcaaaatcaa tcatttatcc ggtaacgggc attttcatta tctgacggac ttggcgaaaa
    27721 atcttgggga taaagtgctt gtgaaggaat ccgcatccgg ccattatcag ctccatgttc
    27781 aaaataaaac aggcgaacct aatcaggaag ggctggatct ctttgatgca tcatccgtac
    27841 aagaccgctc ccgccttttt gtttccttgg caaatcatta cgtcgattta ggcgcattgc
    27901 gttatacaat caaaacagaa aacggtatta cccggttgta caatccttat gccgggaacc
    27961 gccgcccagt caagccggcc ccgtctcctg ccgcaaacac ggcttctcaa gcacaaaagg
    28021 caacacaaac ggacggtgca caaattgcca aacctcaaaa tatcgtcgtc gcaccgccca
    28081 gcccgcaagc aaatcaagcc gaagaagccc tccgccaaca agcaaaagcg gagcaagtga
    28141 agcgtcagca agcagaagca gggcgtaaat cggcagagtt gtcggcaaaa caaagggccg
    28201 gggaagagga acgccgtcaa acagcccaat cccagccgca acgccgcaaa cgccgtgccg
    28261 caccgcagga ttatatggca gtttcccaag accgtccgaa acgccgcgga caccgttcgg
    28321 tacagcaaaa caatgtggaa attgcccaag cccaagcaga acttgcgcac cgacagcagg
    28381 aagaacgcaa agcggcagag ttgttggcaa aacaaagggc agaagccgaa cgtgaggctc
    28441 aagcattggc tgcgcgccga aaagccgaag ccgaagaggc aaaacaccaa gctgccgaac
    28501 ttgcacatcg ccaggaagca aaacgcaaag cggcagaatc cgcgaaacga aaagctgagg
    28561 aagaagagca ccgtcaaaca gcccaatccc agccgcaacg ccgcaaacgc cgtgccgcac
    28621 cgcaggatta tatggcagtt tcccaagacc gtccgaaacg tcgcggacgc agatctactc
    28681 tgccggcacc gccctcgcca tcatttgatt catcagctta cgcagcaccc agggccttgc
    28741 ataatccgga ctggtatgaa aatgattatg aagaaatccc cttggatgcg ttggaagatg
    28801 aagatgtatc ccaatcggtt gacacatcag acaaacagcc tcaagacaat acggaacttc
    28861 atgaaaaagt tgaggcagtg agtttgcaac caagagccgc gcagccgcga acccaagccg
    28921 ccgcgcaagc cgatgcagtc agcaccaata ctaactcggc tttatctgac gcaatggcaa
    28981 gcacgcaatc tatcttgttg gatacaggtg cttcattaac acggcacatt gcacaaaaat
    29041 cacgcgctga tgccgaaaaa aacagtgttt ggatgtcaaa caccggttat ggccgtgatt
    29101 atgcttccgc acaatatcgc cggtttagtt cgaaacgcac gcaaacacaa atcggcattg
    29161 accgcagctt gtccgaaaat atgcagatag gcggagtatt gacttactct gacagtcagc
    29221 atacttttga tcaggcgggc ggcaaaaata cttttgtgca agccaacctt tatggtaagt
    29281 attatttaaa tgatgcttgg tatgtggccg gcgatattgg tgcgggcagc ttgagaagcc
    29341 ggttacaaac gcagcaaaaa gcaaacttta accgaacaag catccaaacc ggccttactt
    29401 tgggcaatac gctgaaaatc aatcaattcg agattgtccc cagtgcgggt atccgttaca
    29461 gccgcctgtc atctgcagat tacaagttgg gtgacgacag tgttaaagta agttctatgg
    29521 cagtgaaaac actaacggcc ggactggatt ttgcttatcg gtttaaagtc ggcaacctta
    29581 ccgtaaaacc cttgttatct gcagcttact ttgccaatta tggcaaaggc ggcgtgaatg
    29641 tgggcggtaa atccttcgcc tataaagcag ataatcaaca gcaatattca gcaggcgccg
    29701 cgttactgta ccgtaatgtt acattaaacg taaatggcag tattacaaaa ggaaaacaat
    29761 tggaaaaaca aaaatccgga caaattaaaa tacagattcg tttctaaaat actaaattca
    29821 tagcaaaata aaatgccgtc tgaactcaag cttcggacgg catttttatc agactaacaa
    29881 agctacagct caatgccttt gagtttcgcc acggtattga tgtctttgtc gccgcgaccc
    29941 gacaggttga ccaaaatcac ttggtcttta cccattttcg gcgcgttttt caccgcccaa
    30001 gcaacggcgt ggctggattc gagcgcgggg atgatgccct cgaatcggca gagcaagtca
    30061 aaggcttcga gtgcttcgtc atctttggca acggtgtatt cgacgcgctt gatgtcgtgc
    30121 agatggctgt gttccgggcc gatgccgggg taatccaagc ctgcggaaac agagtgcgtc
    30181 cccaagactt ggccgttttc gtcctgcatc agatagctgc ggaagccgtg cagtacgcca
    30241 atcggtgcgc ccgaagtaat cggcgcggcg tggtcaggcg tatccacgcc caaaccgcct
    30301 gcttctacgc cgaccaaacg tacgttttct tcttcgatat agggatagaa caaaccgatg
    30361 gcgttcgagc cgccgccgac gcaggcaacg gcgacgtcgg gctgtctgcc ggtggcttcc
    30421 tgcatctgcg ctttggcttc gttgccgatg acgcattgga aatcacgcac catttcggga
    30481 tacggcgcgg ggccggcggc ggtgccgatg atgtagaacg tatcgtccac tcgggcgacc
    30541 cattcgcgca tcgcttcgtt catcgcgtct ttcaaagtac ggctgccact gtcaacgccg
    30601 atgacattcg caccaagcag cttcatacgg aacacattcg gcatttggcg ttgaatatcg
    30661 tccgcaccca tgtacacgtc gcaagtcatg ccgaaacgtg cggcgacggt ggcagaagcc
    30721 acgccgtgct gacccgcgcc ggtttcggcg atgacgcgtt ttttgcccat acggcgggca
    30781 agcaatgcct gaccgatggt gttgttgacc ttgtgcgcgc cggtgtggtt caagtcttcg
    30841 cgcttcaacc agatttgcgc gccgcccaaa tgctcggaca accgcgcggc gtggtaaacg
    30901 gggctgggcc tgccgacata atgtttcaaa tcgcggcgga actccgccca aaattcagga
    30961 tcgtttttcg cttcgttgta ggcctgttcc agctctttca aagcgggaat cagggtttcg
    31021 gaaacataaa gcccgccgtg ttcgccgaaa aagcccttct cgtcgggcgc gtggtagttc
    31081 ttcatcggat tcttccttat gcttcaggtt ttcagacggc atttccgttt tttcaaacat
    31141 gccgtctgaa cgggaaattg tcggcaatta taactgcttt tcacacaagc ccgccatttc
    31201 gaaaaacgcc cgatacgccg ctgccttttt cgccaaactc aaaggatagg cgcgcgaagt
    31261 cgaaggcagg cgcgtcagtg tcaaatcccg tccggcaaac ggaaacggca cggtttcgcc
    31321 cgttttcggc attttgatgc cgccgccctg aatatcgagc aggatttccg tcgccttgcc
    31381 gcctgtcgta caaatatggc ggcagtctgg tattttcgcc aacaccgccg ccaaatcgac
    31441 ggtttcaact acctttaaaa acttgtcgga cgcattgccg tgctcccttg ccgccttcaa
    31501 cacggtcgga caggacgcaa tcccccgttc gtgcaaaaac gccttgattt tctccgcgtc
    31561 aaacgctttt tcagagtgcg cagcctcccc gtgggacggc atccggaaat gcgccgcatc
    31621 gttaaaaaac accagcccgt aaacgcgcca catatcgttt tggaaattcg gataatgaaa
    31681 ctgcatcgcg cgtttgtctt ccttgggcgg aaacgtcccc atcatcatga ccgcagcctt
    31741 cggcggcaac acgggatcga agggatgggt ttcgatttca agcagatttt cagacacgtt
    31801 caatcctcca acaggcaaag cggcagacag ccggtttgca ccaaaccgcc aaacacggca
    31861 agccttcaaa cagcattatc acgccctgcc gttttcggtt acaatgccga catcaaacgg
    31921 atactgtaaa cacatttatg ttccaacaca caggacgaca cataaagcac cgccctatgt
    31981 gtcgtcctga tttggaaggg gttacgcccc gcccaaacag agtctgatcc tgccgcccta
    32041 aagggcgggg tttcaaccga agaggaaaca cgatgaaaga acacaaagcc cgcaagcgtt
    32101 tcgggcagaa ttttttgcag gacacgcgga ttatcggcga tattgtcaac gccgtgcgcc
    32161 cgcaggcgga tgatgtcgtg attgaaatcg gcccgggttt ggcggcaatt accgaacctt
    32221 tggcgaaaaa gctgaaccgc ctgcacgttg tcgaaatcga ccgcgacatc gtatgccgtc
    32281 tgaaaacgct gccgtttgcg gataaactgg tgattcacga aggcgacgtg ttgcagtttg
    32341 atttcaacgg catctcaggc aaaaagaaaa tcgtcggcaa cctgccgtat aacatctcca
    32401 cgccgctttt gttcaaactg gcggaggtgg cggacgatgt cgccgatatg cactttatgc
    32461 tgcaaaaaga agtggtcgac cgtatggttg ccgcgccgaa aagcaatgac tacgggcgtt
    32521 tgggcgtgat gctgcaatat ttcttcgata tggaaatgct gattgacgtg ccgcccgaat
    32581 cgttcgatcc cgcgccgaaa atcgattccg cagtggtgcg catgattccg gtgaaacacc
    32641 gtatcggcaa ggcggacgat ttcgagcatt tcgccaaact ggtgaaactc gccttccgcc
    32701 aacgccgcaa aaccatacgc aacaatctga aagagcttgc cgacgacgat gatttgcagg
    32761 cagtcggcat cagtccgcaa gaccgtgccg aacacatcgc gccggagaaa tatgtggcgt
    32821 tgagcaatta tctggcggac aaggccgtct gaaaagggac gcggcgatgg aaagcaacct
    32881 gcagaaaacc gagcgtttga tccgcgaaat caaccgcctg cacgcacaat attcgcagga
    32941 ttattttgaa accggcaaag tgcggaaaat caatttgagc cacacgctca aaaacgttcc
    33001 gaccgaacat attttgtctt accgccttaa tttgcacgaa gcggttaacg attatttagc
    33061 ctttgccgat acgcgcggca tagacttttt ctaccgcgtg aaaaccgcag aaagcataca
    33121 tgataaaatc aaccgctatc tggcacgcgg cacccaatat ccgaccaaca acatcctgaa
    33181 cgatattttc ggcgcgcggc tgatttggcc gtctgaaaca gtcgccggga ttttagaaaa
    33241 acttgacggc tggaaaacag aatacggctt gaaaaactgg tatttgcgcg atgccggcgg
    33301 ctatatcggc atacacattt atttcaaaaa cagcagcaat ttctactatc cgtgggaatt
    33361 gcaggtttgg gatgaaaaag atgccaaagc caatattgaa aaccatatgg cgtacaaacg
    33421 gaatttcgtg cgttgaattg ccggcaagcc gccttgaaac cgtttataac tgtttataag
    33481 agaataaacc ataaaataca caaacgtatt cctgactttt cctttaaccg cccgagtgaa
    33541 caaactatga aatacacagc cgcactcctg acttttcttt taactgcctg catgaacccg
    33601 aacgatgcgt ttttccaaaa ccggcgttat caaatgccgg aggcgcaatt gaacggttca
    33661 aacgccgttt tccattacgg ttattcccaa aatcccgatc atgatttatt ggtcgaccaa
    33721 gtccgcgtgc cggacgcgta cagggcttca tttgcgcggg attggatagc gaaggagcaa
    33781 ggttaccgca aaaacgactg cgtactggaa aaagcggaaa gcgggggtgt gacgtactac
    33841 acctgcgatg cggaaaaagg attcaacggc acacgtttcg tcatctatgt cgtgaatatg
    33901 aaaaacgaca aaggctacgt caaagtttac cggggcatga ataagccgaa tcaggaagag
    33961 ttaaccaaat tggttgccga tttgaataag ttttaccctt aatcagccag acggattcag
    34021 actgcccgaa aagaatggac actatgatca aattcaaaaa cgtacacaaa catttcaaag
    34081 acctgcacgt catcaacggc gtaaacttgg aaatcaaaaa aggcgaagtg gtcgtcgtct
    34141 gcgggccttc gggcagcggc aaatccacac tcatccgcac cgtcaaccag cttgaaagca
    34201 tcgaaagcgg cgagatttgg gtggacggcg tcaacgttgc cgaccccaaa accgatttga
    34261 acaaaatccg cgaagaagtc ggctttgtgt ttcaaagttt caacctctac ccgcacctga
    34321 ccgtgttgga caacatcacc ctcgcaccga tgaaggttaa ggggcaaaat gcggaacagg
    34381 cggagaaaaa ggcaatggag cttttggaac gcgtcggact ggcacacaaa aaagacgcct
    34441 tcccttccca actttccggc ggccagcagc aacgcgtggc gattgcgcgc gggctggcga
    34501 tggagccgcg cgtgatgctg tttgacgagc cgacttccgc actcgacccc gaaatggtcg
    34561 gcgaagtgtt gaaagtgatg aaagacttgg cggaaagcgg catgacgatg atgtgcgtaa
    34621 cccacgaaat ggggtttgcc cgcgaagttg ccgaccgcgt gattttcgtc gataaagggc
    34681 aaatccttga agacgaaacg ccggaagcgt ttttcaccaa cccgaaacac gaacgcgcca
    34741 agcagttcct gcaacaggtc atgacccatt gatgctatgc cgtctgaaaa ccgaacgttc
    34801 agacggcata gcccgacacc gcaagatgat tgagaaagca caccatgtat tttgttgacc
    34861 gcaccgccgc cgtcctcaag ccgaccgcgc gctttttgga atggctcaaa agcaccgacg
    34921 aaaatatgcc cgacctgacc atagaacagc ttcgcgccga ctgttccgtc ttcctcgttc
    34981 cgcagttcga cgaaccggaa gccgtcgttt cctacttcga cgaacgctac cggcagattt
    35041 ttgaggcgga gctggcaggt tgggacatcg acaaggacaa atggccgcaa gatatggggc
    35101 tgaaggcgtt ttgggaattt ttcgacattg aaatccacga tatggttttg gatatggaag
    35161 aagcggattt gaacatcacg cccgtgttcg acaatatgat gtaacgccat gcgcgccttt
    35221 cagacggcat tgaggccgtc ccgcatcctg aacatcctga ccgtatcact ccactcggct
    35281 tccattgccg tctgcctgac ttggttttac ggccggatga tgtggttcgg tttggcggct
    35341 ttggcggcaa gttacgcata ctcgctcagg ataacgaatc tgaaacaccg ccatgccata
    35401 accgccatta ccatagaccg cgacggacgg gcggaaatcg tatccggcaa agacaaaaca
    35461 gcggcaacac ttgcgggcag cagtatggtt acgccttatg ccttattctt acaatgggac
    35521 acaggcggca aaaccgtccg ccaatgcatc atgcccgaca tgacggacaa agaatcctac
    35581 cggcggctga aagtctgggt gctttggcgg cagccgaaaa aaaccgccga aaccgataca
    35641 tcagactgat ttcagacggc atttgaaaac gaaacactca tgaaaacact acaagactgg
    35701 ctctcgcatt tggaaaccgc ccacagcggc ggtttgatcg acatgggttt ggagcgcgta
    35761 agcgaagtaa aaaagcgcat gaacctgaca ccgcaatgcc ccgtcgtcgt cgtcgcggga
    35821 acaaacggca aaggttcggt ctgcgcctac ctgacacaga tttacaaaca ggcaggcttc
    35881 aaaaccggca cgctgaccag cccgcattta ttgcattaca acgaacgcat cgccatcaac
    35941 gccgaacccg tttcggacga tacgattatt gcctctttcg agcgcatcga agccgcgcgc
    36001 ggcgaaatat cgctgactta ttttgaattc aatgccttgg cggctgtcga cattttcata
    36061 cgcgaacaag tggatgtaat gatattggaa gtcggcttgg gcggacgttt ggacgcggtc
    36121 aacgcgtttg acggcgattg cgcggtggtt actagtgtgg atttggacca tcaggcattt
    36181 ttgggcgata cggtcgaaca ggtcggcttt gaaaaggcag gcgtgttccg cagcggcaaa
    36241 cccgccatct gcggtcaaaa ccccgcgccc gcatcattgg tcgcacacgc cgaagccata
    36301 ggcgcgaaac tgctgatggt acagcgcgat ttcgagtttc acgcgatgga aaacatccaa
    36361 tggaactacc gcttccggcc gcagcattca gacggccccg cacgcaaccg caatgccctg
    36421 cccttccccg cattgcgcgg cgcataccag ctttctaacg ccgcctgcgc gttgaccgta
    36481 ttggaatgcc tcgacgacag actgccggtg gacattggtg caatcaaacg cgggctgctg
    36541 ctggttgaaa atcccggacg cttccaagtc ctgcccggcc ggccgctgac catattggat
    36601 gtcggacaca acccccacgc cgcccgcgcc ctgcgccgca acctaatcaa ccttgcctac
    36661 gcgcaaaagc gcaccgccgt gttcagtatg ctgtccgaca aagacataga cggcgtgtcg
    36721 gaaaccgtta aagaccagtt tgacgagtgg tatatcgcgc ctttggacgt gccgcgcggt
    36781 atgacggcgg atgcactgaa agccaaattg gaacaacacc acatcgaaaa catacagaca
    36841 ttcgccgccg tccgcgacgc gtaccgggcg gcagcctcaa aagcgggcga agacgacaga
    36901 atcgtcgtat tcggctcatt tcataccgtc gccgacgtaa tgtcggtact gtgaaaagga
    36961 aacttctatg tccgaaaaca aacaaaacga agtcctgacc ggttacgaac agctgaaacg
    37021 gcgcaaccgc cgccgcctcg taacggcaag ctccctggtt gccgcctcct gcatcctgct
    37081 ggcagccgca ctcagttccg atcctgccga cagcaatccc gcaccgcagg ccggcgaaac
    37141 cggcgcaacg gaaagccaaa cggcaaacac ggcacaaacc cctgccttga aatccgccgc
    37201 cgaaaacggg gaaaccgccg ccgacaaacc gcaggacttg gcaggcgaag acaagccttc
    37261 tgccgccgac agcgaaatca gcgagcctga aaacgtaggc gcgccgctgg tgctgattaa
    37321 cgaccggctc gaagacagca acatcaaagg tttggaagaa tccgagaaac tgcaacaggc
    37381 agaaaccgcc aaaaccgaac cgaagcaggc aaaacaacgc gctgccgaaa aagtgtcggc
    37441 aactgccgac agtacggata cggtagcggt tgaaaaaccg aaacgctctg ccgaacccaa
    37501 accgcaaaaa gcggaacgca ctgccgaagc caagcccaaa gccaaagaaa ccaaaaccgc
    37561 cgaaaaagtt gccgacaaac cgaaaactgc tgccgaaaaa accaaaccgg atacggcaaa
    37621 atccgacagc gcggtaaaag aagcgaaaaa agccgacaag gctgaaggca aaaagacagc
    37681 cgaaaaagac cgttcggacg gcaaaaaaca cgaaacggcg caaaaaaccg acaaagcgga
    37741 caaaaccaaa accgccgaga aggaaaaatc cggcaaggcg ggcaaaaaag ccgccattca
    37801 ggcaggttat gccgaaaaag aacgcgcctt gagcctccag cgtaaaatga aggcggcggg
    37861 tatcgattcg accatcaccg aaatcatgac cgacaacggc aaagtttacc gcgtcaaatc
    37921 aagcaactat aaaaacgcaa gggatgccga acgcgatttg aacaaactgc gcgtgcacgg
    37981 catcgccggc caggtaacga atgaatagcc tccccattgc cgacctcctc gcctccgccg
    38041 tcatcgccgc ctgcatcgtc atttccacga tgcgcggcgt gattgcggaa gcaggttcga
    38101 tggtggcatg ggtggtttcc ttcttttttg ccaaactctt tgccgcaccc ttcgccgacc
    38161 tcgcctttgc ctcgttccaa ccccgcctgt ttgcattggc tctgtcattc atttccctgt
    38221 tcgtcattgc ctgtctgatc cagaaaatgc tccgttcgct gctgaccggc gcagtttcgg
    38281 cggtcggtct gggctttgcc aaccgcattt tgggcggtgt attcggtgca ttgaaaggcg
    38341 ttttgattgt taccctgctg atcatgcttg cttcaaaaac cgacctgccc gataccgaag
    38401 aatggcaaca gtcctatacc gtaccgtttt tcgtatcgct ttccgaagcg gtgttaaacc
    38461 atacggacaa cgcacccgaa tccctcgacg acgactaatc cgcatacgtg gcgtttcaga
    38521 cagcatacct gatttatgcc gtccgaaacg ccttttcttt ccttgacaca ccccgacaga
    38581 caaagcacac ctgcctgact ttacacaaat attgtcaaca attcgggcaa aaagccgccg
    38641 tttgctttat aattccgttt cacccttaaa cctcgaatcg gagaagacga tatgtgcggc
    38701 gtattaggtt tggtcagtca tgaacccgtg aaccagcttc tgtacgacgg tttgcagatg
    38761 ttgcagcaca gggggcagga tgcggcgggc attgcaacgg cggaaggcgg taccttccat
    38821 atgcacaaag gcaaagggat ggtgagcgaa gtgttccgca cgcgcaatat gcgcgatttg
    38881 accggcaacg ccggcatcgc ccacgtccgt tatcccacgg cgggcaacgc cggcagcagc
    38941 gcggaggcgc agcctttcta cgtcagctcg cctttcggca tcgttttggc gcacaacggc
    39001 aacctcacca acactgccga actgtatgaa aacgtgtgta acaaacacct gcgccacatc
    39061 aacaccggct ccgattccga agttttgctc aacgtattcg cgcacgaatt gcgccgcgaa
    39121 gtctctaaaa acgccgaccc gcaccggctc aatgccgaca atattttcaa cgccgttgcc
    39181 gaagtccacc gcctggtgcg cggtgcatac ggcgtggttg ccatgattgc gggctacggc
    39241 atggttgcct tccgtgatcc ttacggcatc cgcccgctgg cattgggttc gcaaaccgac
    39301 agcgaaggca ggaaatccta tgccgtcgcc tccgaatccg tcgccttcaa tgcgcttgcc
    39361 tacgatttgg aacgcgatat ccggccgggc gaagcggtat ttgtcggctt taacggcaca
    39421 atcatcgccc gacaatgcag cgaccgcgcc aaactcagcc cctgcctttt tgaatatgtt
    39481 tattttgccc gccccgactc cgtgattgac ggcgtgtccg tttaccagtc gcgcttggat
    39541 atgggcgtgt ccttggcgga aaaaatcaaa cgcgagctgc ccgtggacgg catcgacgtc
    39601 gtgatgccca ttcccgatac cagccgcccc agtgcaatgg agcttgccgt ccacctcaac
    39661 aaaccctacc gcgagggttt gattaaaaac cgctatatcg gccgcacctt tatcatgccc
    39721 ggtcagtcga cgcgcaaaaa atccgtgcgc caaaaactca gcccgatgga aaccgaattt
    39781 gcaggcaaaa gcgtgttgct ggtggacgac tccatcgtgc gcgggacgac cagccgcgaa
    39841 atcgtcgaaa tggtacgcgc ggcgggcgcg cgcaaagtct atatcgcctc cgccgcgccc
    39901 gaagtgcgct atcccaatgt gtacggcatc gatatgccca cgcgcgaaga gttgattgcc
    39961 aacgggcgca gcgcggcgga aatcgccgcc gaaatcggcg cggacggcat cgtgtttcaa
    40021 ggcttgggcg atttggaagc cgtcgtcaaa gcactcaacc cgaaaatcga atccttcgat
    40081 tcgtcctgtt tcaacggcat ttatcggacc ggcgacatcg atgatgccta cctcgaccgc
    40141 ctgtctgccg agaaatccgg ctgcgccggt ctgaaaatcc acccgagcag gatggaacac
    40201 agcatcagca tcagcgatgc gggcgacgaa gaataaggct tcccaaaccg cgatgccgtc
    40261 tgaaatccga acgttgggtt ttcagacggc atttcccata tcggcatcac atttcccgtt
    40321 tcatccgcac acaatatgag taccgaaacc aaaaactaca ttacgcccgc cggctggcag
    40381 gcattgaaag acgagcttta tcaactggtc aataaagaac gccccgaaat cgtccaaatc
    40441 gtcaactggg cggcaggcaa cggcgaccgc agcgaaaacg gcgactatct ttacggcaaa
    40501 cgccgtatgc gcgaaatcga ccgccgcatc cgtttcctga ccaaacgttt ggaggctgcc
    40561 gtcgtcgtcg atcccgaatt gcgcgaagcg accgaccaag tatttttcgg cgcgaccgtc
    40621 ggtctgttgc gtggcgacgg gcgcgagcaa accgtcaaaa tcgtcggcgt cgatgaaatc
    40681 gataccgcgc aaaacaaaat ttcttggatt tcgccgttgg cgcgttgcct gattaaagcg
    40741 cgcgaaggcg acgaagtggt tttgaacacg ccggaaggcc gtgaggaaat tgaaatcctt
    40801 tctgtcgaat acatcaaaat cgactgatcg ggaatgccgt ctgaaacggc acaagcgcac
    40861 cgtttcccaa ataaaggaat accgaatgag gaaaatccgc accaaaatct gcggcatcac
    40921 cacaccggaa gacgcactgt atgccgccca cgccggcgca gacgcattgg gactggtttt
    40981 ttacccccaa agcccccgcg ctatcgacat cattaaagca caaaaaatcg ccgccgcact
    41041 gccgccgttt gtcagcgttg tcgccctttt cgtcaacgaa agcgcgcaaa acatccgccg
    41101 catccttgcc gaagtgccga tacacatcat ccaattccac ggcgacgaag acgatgcatt
    41161 ctgccggcag ttcgaccgcc cctatattaa agccattcgt gttcagacgg catcagacat
    41221 ccgaaacgcc gccacgcgct tccccaacgc tcaggcactg ctgttcgatg cctatcaccc
    41281 ttcggaatac ggcggcaccg gacaccgctt cgactggacg ctgttggcgg aatattcggg
    41341 caagccgtgg gtgcttgccg gcgggctgac ccctgaaaac gtcggcgaag ccgtccgcat
    41401 caccggagcg gaagcggtcg acgtatccgg cggcgtggaa gcgtctaaag gcaaaaaaga
    41461 ccccgccaaa gtcgccgcct ttatcgcaac cgccaaccgc ctatcccgtt aaagcaacaa
    41521 aaattgccgc cggaatgact tatagtggat taacaaaaac cagtacggcg ttgcctcgcc
    41581 ttgccgtact atttgtactg tctgcggctc gccgccttgt cctgattttt gttaatccac
    41641 tataatctca aaaatttatg ccattaaatc aataatttct gatgaatttt gaaaacttaa
    41701 tcccgtcatt cccgcgcagg cgggaacccg gttcattgag cttcagctat ttagaataaa
    41761 ttttgaaact ctaatcgcgt cattcccacg aaagtgggaa tccggttttt tgagtttcag
    41821 tcatttccga taaattgcct tagcattgaa tgtccggatt cccgcctgcg cgggaatgac
    41881 ggcggaaatc ttgtttatat tgaatcaaaa aaacctgcac cttaatcagt tggcggttta
    41941 gtccgacttt tggggtgcag atcaagcttc cagacggcat ttcctttaaa acttcatttc
    42001 gagcgcgagg ctgaagttcc tgcccggtgc ggcatacctt ccatagttgc tgtcgccgcc
    42061 gtgccggttt gccgtgcttt ccgcagtctg gcgcaaggat tcccaagtaa cgtagcggta
    42121 gttgccgata ttgtagatag ccgccctcaa ggtcagccgt tttttcagat tcagataagc
    42181 ggaaacatct gccgttttcc aagaagacgt aacccttcct gccgaatatc gtttttgatc
    42241 gcctgccaga taagcaagct cgtcagggtt tttccctttg gaataggtca gcataatgtt
    42301 tgcgccccat ttcccctcgg gctggtcgta tccgaacccc aaaacataac gcgacggctg
    42361 taccgcatcc aaagcatagc tgcggaggga caagtccggc cggttggata ccgatttcgg
    42421 tttgatacgg ttgtacgcca atgtggtgta caggccttcg ggcagtttgc cgtatacgcc
    42481 gttccagtcg attttcccca agatgttgat gccttgaagc gacatatttt gggcattgta
    42541 ataatcgcgt atatcaatct ctgtcaatcg tcctgctgaa tccggcaatt tggttttttg
    42601 atcggcaacg gcaatcatat cggtataacg gttgcggaaa ctgctgattt ccaaaaagcc
    42661 gaaatcgccc ttccactgca aaccgatttc ccggttggct gccttttccg atttcagggc
    42721 gggacgctgc cagcctttcg gataatcgtg ataaatgtct atcccgaaaa gttcttggaa
    42781 ggaaggcgtt ctgaagccgc tggaggcgcg gtaagacacg gaaaaatgcc ggttcggttt
    42841 gagcacgatg ccgctgttcc acgaacggtc ggcataccgc ccgctgcgga cgagttcttc
    42901 cgacgtggtg aagtttttcc ggtcgtacct gccgcccaag ctgaaatcaa aatatttgcc
    42961 gattgaaaaa cggtcgttca aagaaatgtg gatattgctg ccgttgattt ttcttggcac
    43021 gcatttgcgg gaacgcaggg tttcgatata gccgcagacc gacccttcga cgacttcggg
    43081 cttacccaaa cggtacttat cttgattctt ttcatcgaat cccgtggatt ccgaaatcct
    43141 tgccgcattg tgggaaagct gttctgggcg ggatactgct ttggaagcat cgtaaccgaa
    43201 gcccaaagtc agatggtgtt tcgtccattt gtttttcagc gacttctcaa acgaggcatt
    43261 caaaacattg tgctgttcgc ggtagtggaa acggtcgctg ctgtcgtagg aatacggttt
    43321 gtccgccgac gcgcggcagg atttgtccac ggcaggatac acggcgcaat tcagcttcag
    43381 cgtgttgttg tcggttgcca cgccctgttt gtcaaacgac aacaccgcct tatccgccca
    43441 gttgtccgag tatttctcat tttcataacg gtacagcaaa cccatacggc ggcggcggtg
    43501 atgttcgtca ataaatttgg tgcgggaata tttcaaacct atgcccttga ccaaattttt
    43561 atcgcccttc cactcttcta tattcggcac aaaatacaag ccgtcgcgga aatcgtcgcc
    43621 gtcgtacacc ccgctcttgt ctctaaactt ttccgcctcg tccgtaccgt aatactgttt
    43681 ttccgtcata tcgcggatgt cgtaacgctg tttggtatcc tcaaacacgc cgccgacata
    43741 atgcctgccg ccgaagcggt agcccagctt ggcaagccaa gagccgctgc ggtaatccat
    43801 cggatcgggc aatatcctgc cgccgcccgt gtaggcttgg gcggacaggt tttcgtggcg
    43861 cgcctgcgcc tcccgcacct gcgcctcttc ttcagcactt aaaggctgat tttgttcaat
    43921 acgttctttt acccagcggt tgagctggcg gttcaaatat atcccgtagc ccgccaattt
    43981 tgccacgggc ttgagtgtat tctcgccctc tactaagaaa aatggctctg ttgtcttgcg
    44041 tttaatatcg tatgtctggc ggaacgcgtc caaacggtct atgccgtatt ccaccccgtc
    44101 cgcaatatcg ccgtgcgggc gcgtttcccg cccttggcgt tcggttcgga ttagcagccc
    44161 ttcccaaccg tctttgctga accccgcgcc gagcgacttc ataaattggc ggtttttact
    44221 gccgtaagcg gtttttgcct gtatcccccg gcttttgccg tctgaaatca ggtctgccgc
    44281 ctctttggtg cggaaggcga ccgcgccgcc gagtgcgccg ctgccgtgat cggacgaacc
    44341 ggcgcctttg tcgatttcca ccgtgctgat gttttcatat tcgatttcgt tgattgcgcc
    44401 gctgccgccg cgtccgccgt atccgctcaa cgatccctgc acggtaaacg cctgtatttg
    44461 ggcaacgccg tcaaccgaaa ccgccacacg gtttttatct acgccgcgta tcgagtagcc
    44521 gccgctcgcg ccgttgccct gttcgacaac cgccacgccc ggatcgtagc gcgtcaggtc
    44581 gcggataccg agtacctgtt ctttgttcaa cgtttccgac gttttgacga ttttgcccaa
    44641 acctgtcgcc tctttcgatc gccgtcccac tttggcggca cggacggtaa cctctttcaa
    44701 tgattgggtc tgcgcggcat catgcgccgc cgtttcaggg tttgccgcat atgacgggaa
    44761 ggcggcggca acagccaagg cagtcagggt aagcgggaat gtatgccttc tgttcattgt
    44821 gttgcctcct tgtcatcttt tttcgcaccg aataccgcac cgaatttccg gtcgctgtcg
    44881 agaatgctgc cgcccaattc tgccgcctgc gggccgtaaa agccgcccgt tacaagaaga
    44941 ttgtcggctt tgaagctctg cggtttggtc gaaccctgcc cggaaaggtc aataccgtta
    45001 ttccgagtat gcgccaaagc gtggaaaccg ttaccgtcaa tcacaccttt ttcaatataa
    45061 aaagcggggt tcgtatcatt tttttctgtc aacgttccaa aaatcgattt cttgccgaaa
    45121 tcaacggtaa attctgcttt tgccccttga ttcgcatagc tgtccttttg aatggacgta
    45181 gtgccaggct gatcgtcttt cttatccggt acgccgatac gcgcttccca agtgccggta
    45241 taatgcgccg ttccggtttt tggaatgtcg gcttccgccg tgcggatacc tttcaggaaa
    45301 aggtcgatgt ccctgccttt aagggcttcc ggggcgggcg ggatgccgtc tgaaacaccg
    45361 ttgccttctt ccggcgattc ttcttcgggt tcttcctctt cagcttcttc ttcgatttct
    45421 tcagcttcat cagcttcttc ttcgacgatt tcgtcttcgt cttcgccgtt atcatcttcg
    45481 gaaacttcgt cttcgctttc ttcggcgatt tcttcgtctt cgctttcttc accgttatta
    45541 atacccgaat cctcttcgtc ctgcgccttc ggtttgacgg cggggcgttc ggtttttatc
    45601 cgtccgagtt tcacataggt caaaaagtcg caacaagcac tgacggtcat tttcctgccg
    45661 tcggcaagat cgatggtttt ctctttgcta accaaaggaa tttcacgccc ttcgacaaga
    45721 agtttgtcgg gatgaccaaa atcgggcata ggggaaatgg caaacttacg ggcatggtta
    45781 tcagtcgcct cgtcaacgga aatttttaga gaatccaaga ttttggtgta tttttcagac
    45841 ggcatagcag gatttgtgcc tgatgtctct gttttttgtt tgcctgcgaa tacgccgaat
    45901 acgccgttgt cgttactgat aaaccgtccg gcaagctctt cccccttatc gccgaaaaaa
    45961 ccgccctcaa gccgctgatc ggcatcggta tggaaaaaca aatattcttt atcagcgtgt
    46021 ctcgtcttca cctcggtgtt aactttggca ctgccggtaa agcggttgcc gtttaaatcg
    46081 gcagtgatgt tgtaaatgat caatggtttt ttaggttcct ttggatcatt tctcttttgc
    46141 acatactgat ttttaatcag ctcgcccttt aggatttttt tgtcgaaatc aaccgtatat
    46201 tcggcaggat gtttttccct gtcgtcggca tccttagccg cataagaagt tgcaccaata
    46261 tcgttaccat aaaatgttat ataacccaaa tcgtcactgg caaccgcctt acctgtccgg
    46321 tgacgtttgg catcggtcat atattgccag ttgccggaat atttcaccct tcccgcactc
    46381 ggcaaagatt gggaaggatg ttctccggaa taatatacaa aaccgtcata accaaaacgg
    46441 tgggtaaacc gcttaccacc tgagttctgt tcgatttcat cttttccgtt tttagtatat
    46501 acataaccgg catccacaaa tttatagcca tatttttcat tttccttttc tgatgtggta
    46561 atgcccgcct caggattacg tttatgaatt tcgcttttaa gttgttgaag tttatttcct
    46621 tttgaaccgt ataaaaacag aacatcatct tctttaaacg acagcttttc ttctgcttgt
    46681 ttgctatttg gaaagtcatt gccatcctta tcagaagttg cgatattccg cctcaacagc
    46741 cgcattgccg caccgacggc gggccggttg accggcgtgg tttctaccga aggctcggca
    46801 gggggggggg aagtgggaac gtccttagac ttgaaagtga cggggtacgc ggtcggcgtt
    46861 gattcgacaa caggctgcac gccgaaattg ccgccgcagg atgccagcat caacggcagc
    46921 aaggcaatac cgtaataatt cagtttacgc atccctatcc cccctattta attaataata
    46981 attatcatta tattaatatg cacagataat atcaacccgt ttttaacaaa gatattcccg
    47041 attgaaacaa aatgccgtcc gaaacctgtt cagacggcat ttgcgtaaag ttcagcaaga
    47101 aaaactacaa acccagctcg cgcaggaagc gaatgtcgtc tgcccaaccg gatttgactt
    47161 tgacccagac cttcaaaaat actttgttat caaacagttt ttccatatcc agccgcgctt
    47221 cggtggaaat ttttttcaaa cgctccccgc ctttaccgat caaaatcgcc ttttggcttt
    47281 ctttgtcgac caaaacggcg atgtagatgc ggttcaaacc gtctccctct tcaaactgct
    47341 ccacttcgac gttcatcgca taaggcagct cctcgcccaa atagcggaag agtttttcac
    47401 gcacgatttc catcgccaaa aaacgcgccg atttgtccgt aaccatgtct tcgggataca
    47461 tcggtacgct ttcgggcaga tacggcttga gcagctccaa caggttggca atccgcaaac
    47521 cgtgtttcgc actgaccgcc tccgccgccg caaattcaaa ttcggcgcgc acttgggcaa
    47581 caaacgcctc cagcgcgtaa cggtctttcg ccttgtcctt gtcgattttg ttgatcacta
    47641 aaatgaccgg cgtgtgcttg ggcagttgtt tcaacacgac gcggtcggca tcggtaaggc
    47701 gcatcgcctc cacgacgaaa accaccacat ccacaccgcc gagcgcctcg gtaacatttt
    47761 gattcagcct gtcgttgagc gcgttgcggt ggtcggtttg aaagcccggc gtatcgacaa
    47821 acacgaactg cgcggtatcg tcggtataaa tccccgttac gcggttgcgc gtcgtctgcg
    47881 cctttttgct ggtaatactg attttctgac cgatgagatg gttcatcagc gttgatttgc
    47941 ccacgttcgg acgaccgaca atcgccacga agccgcaacg gtatccgccg gcggcgcgtt
    48001 cccctgcaag gaaggtttca atatccatat tcgctttcat atccacattt cagacggcat
    48061 attcacgcgc cgcctcattt ctttttcttc ttcagcggca gcttctcttc cagccatttc
    48121 aaagcctctt tcgccgcctc ctgttccgcc gccttgcggc tcgtcccttt ggcacggcac
    48181 acgaaaccca gttcgcccaa atcgcaggaa atgacaaaca tactgtcgtc ggcatggccg
    48241 atttgctctt cgatgcggta tttcggcaag gcgaaacggc gcgcctgcaa cgcctcctgc
    48301 aaagcagttt tgccgtcttt tgcctgattt tggaaatcgg cgcgccggac gcgttctgca
    48361 aacaaatggc gcaccacctt ttccgccgtg ttgaaatcgg catcgaagct gacggcggca
    48421 aacatcgcct ccatcgcgtc cgccagtatc gaaggccgtc tgaagccgct gctcttcaac
    48481 tcgcccgccc ccaaatacag accgtcgccg acattcattt ccgccgccat ttccgccagc
    48541 acgccctcat tgaccagact cgccctcaac cgcgacaact cgccctcggt caacttcgga
    48601 aacgcgtcaa acagcatccg cgccaccgta taattcaaaa tcgaatcgcc gacaaactcg
    48661 aaccgttcgt tgtgcttcgc atgatggctc ctgtgggtca aagcccgccg caaaagcgac
    48721 atatcgcgga acgcgtagcc taactttttc tgtatcgcag tatgtgcctg ccgtttcaaa
    48781 acatcgtctt tcattaccgt cttccgcaaa aaacagcccg aatgcgtttc catactccaa
    48841 aaatacagaa acaccttaag gctgcaaacg gcgcacattg taccaccaaa ccgccgccgt
    48901 ctgccgacaa cgcgggaatc gtggtaaaat ccgcaagttt ccccccccaa cgtattcccg
    48961 caatgaacgc atttgcacaa gcactttcct cggcactcga ccgctgcatc gccaccaaca
    49021 ccgtcgccaa acaaaaccgg cccgtcggct tcctttaccg cgaagccccc gtttttgaaa
    49081 acgacagcgg ctggcgtttc ttcagcggcg acgaaaccga cgaatacacc gacgaccccg
    49141 acaacttcag catcgtcagc ctcgccgaca tcaccaaaac caaccctgaa accgccgcac
    49201 tgctttccca acccgaaggc agcgcgtggg agcttgccga agacggcaca ttccaaaccg
    49261 ttgccgactg gcagccgcaa gactgaaacc ttcagacggc attccgaaac cccgaatacc
    49321 aaaggacacc caatgaacac catcgccccc aacctcgacg gcaaacacct ccgcatcggc
    49381 atcgtacagg cacgcttcac caacgaaatc ggcagccaaa tgctcaaagt ctgctgccgc
    49441 accctccaag aattgggcgt agcagacgaa aacatcaccg tcgccaccgt acccggcgcg
    49501 cttgaaatcc ccatcgcgct gatgaacttt gcctcttccg aaaaatttga cgcactgatt
    49561 gccatcggcg tcgtcatccg tggcgaaacc taccatttcg agctggttgc caacgaatcc
    49621 ggcgcaggga tcggccgcgt cgcactcgac tacaacatcc cgattgccaa cgccgtcctg
    49681 accaccgaaa acgacgcgca ggcaattgaa cggattggag aaaaagcctc ggatgccgcc
    49741 aaagtcgccg tagaatgcgc caacctcgtc aaccttctgc tcgaagaaca gtttgaagac
    49801 gaagaataac aaacagggcg tacaccgatg cgccctttcc gtttcagacg gcataccgtg
    49861 ccgcccaacc gtttcaagga aaaatcatga aaacagcccg ccgccgttcc cgcgagcttg
    49921 ccgtacaagc cgtttaccaa tcccttatca accgcaccgc cgcgcccgaa attgctaaaa
    49981 acatccgcga aatgtccgac tttgccaaag cggacgaaga attgttcaac aaactcttct
    50041 tcggcacaca aaccaacgca gcggactaca tccaaaaaat ccgcccgctg ctcgacaggg
    50101 acgaaaaaga cctcaacccc atcgaacgcg ccgttttgct gaccgcctgc cacgagcttt
    50161 ccgctatgcc cgaaacgccc taccccgtca ttatcaacga agccatcgaa gttaccaaaa
    50221 ccttcggcgg cacggacggg cacaaattcg tcaacggcat cctcgacaaa ctcgccgccc
    50281 aaatccgccc agacgagccc aaacgccgtt gatactcgga aaatccgaat cggaaaatac
    50341 acaaatgccg tctgaaaacc tttcagacgg cattttgctt gaccgttcaa tcaatactgc
    50401 accgtccagc cgatttcgcc gcccgcgcgc atcgggacaa gttcgccgtc gccgtaaggg
    50461 acgcttgcgg gaacggtttg gctttgtttg acaagggtaa tcgtgtcggc gttttccgga
    50521 atgccgtaga accttgcgcc gtttttcgag gcgaaggctt cgagtttgtc caacgcgcct
    50581 gctttttcaa acacttcggc gtaaagttcg acggcggtca tcgcgctgaa cataccggcg
    50641 cagccgcagg cgttttcttt ggcggatttg gcgtgcggcg cggagtcggt gccgaggaag
    50701 aatttgtgcg ccttctcgcc ggtaacggcg gcgaccaatg cctgacggtg ggtttcgcgc
    50761 ttgaggacgg gcaggcagaa atgatggggg cgcacgccgc cgaccaagag gtcgttgcgg
    50821 ttgagcagga ggtgttgcgg ggtcacggag gcggcaacgt tgtcgcccgc ttccaaaacg
    50881 aggcgggcgg cttcggcggt ggtgatgtgt tcgaacacga ctttgagatt cggcacttgc
    50941 gccaaaacgg gtttcatcac gcgcccgata aaggcggctt cgcggtcgaa aatgtcgatt
    51001 tcggggtcgg ttacttcgcc gtgaacgagg aacaggatgc cctgttttgc catttcttcc
    51061 aaaacgggga tgagtttgaa caggtcggtt acgccggaat cggaattggt ggtcgcgcct
    51121 gcggggtaga gtttgaaggc gacgatgccg gcggctttgg cttcgcgcac gagttcgggc
    51181 gtggcttggt cggtcaggta aagcgtcatc agcggctcaa acgcgctgcc ttcgggcaac
    51241 gccgccataa tgcgcgcttt gtaggcaagc gcgtcggcta cgctgacgac gggcggtttg
    51301 aggttgggca tgatgacggc gcgccccatc tggcgggcgg tataaggggc aacggctttg
    51361 agcgcgtcgc cgtcgcgcag gtgcaggtgc atatcgtcgg gtcggatgat ggtcagggtt
    51421 tgcatggttg ttccttttta gatttttggt ttccagacgg catgccgact ttatgccgtc
    51481 tgaagtcagg ggagaattag gggtttcccg ttatgggaac ggtgcgttag gttcaatact
    51541 gcctgtacgg gtaaatccgg ggaatcggcg gtttgtgcgg tcaatacggt ttcttcaggg
    51601 ctgcccgatt cccgccaggc atagctgatt tgcctggttt caaacggtgc ctgcaccgac
    51661 tgttccgccc tcaattctat attcaattaa aaacaaaata gtacaacact cgacgttgaa
    51721 ggtttaacca tggcatactc tgcggactta agaaacaaag ctttaaacca tagcggatta
    51781 acaaaaatca ggacaaggcg gcgggccgca ggcagtacgg atagtacgga accggttcgc
    51841 ccggcgcttc atcaccttag ggaatcgttc cctt
//
LOCUS       DAXGCP010000003        45786 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.003, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000003 DAXGCP010000000
VERSION     DAXGCP010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 45786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 45786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..45786
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.003"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(8..943)
                     /gene="hemC"
                     /locus_tag="ACFJCW_000120"
     CDS             complement(8..943)
                     /gene="hemC"
                     /locus_tag="ACFJCW_000120"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HFC4150375.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDRILDRTLSKVGGKGLFVKELEQSLQDGRADLAVHSIKDVPMDLPEGFALAAISERA
                     NPFDAFVSNRYARLEEMPEGAVVGTSSLRREAQLRARYPHLVIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDERIRMILSESDSLPAAGQGALGIEIATHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLILRGLVGHPDGSIVLQADA
                     QAPAGYADALGRAVAKKLADDGAQELIGAVLNTEN"
     gene            1062..1577
                     /gene="ybeY"
                     /locus_tag="ACFJCW_000121"
     CDS             1062..1577
                     /gene="ybeY"
                     /locus_tag="ACFJCW_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HFC4150376.1"
                     /translation="MKRAKKYPFLTLQRQRFHLNFENASSAAGIPAERDFYRWAWSAL
                     KNEYLRADIGLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSERLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGTLHLMGYDHIKDDEAEIMEAEEIRLMRAA
                     GYPNPYREDGH"
     gene            1579..2403
                     /locus_tag="ACFJCW_000122"
     CDS             1579..2403
                     /locus_tag="ACFJCW_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HFC4150377.1"
                     /translation="MDGAQPKTNFFERLIARLAREPDSAEDVLNLLRQAHEQEVFDAD
                     TLTRLEKVLDFAELEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGDIEDEFDEDESADNIHSVSAERWRIHAATEIEDINAFF
                     GTEYGSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(2546..3925)
                     /gene="nhaC"
                     /locus_tag="ACFJCW_000123"
     CDS             complement(2546..3925)
                     /gene="nhaC"
                     /locus_tag="ACFJCW_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HFC4150378.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQAGMIGALNQGMGAVYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTACATVGVAFMGMAAAFQADMAMTAGAIV
                     SGVFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPSVAA
                     QDLNSVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDIAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GVIPSLLEAVRTFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDKLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(4215..5438)
                     /locus_tag="ACFJCW_000124"
     CDS             complement(4215..5438)
                     /locus_tag="ACFJCW_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HFC4150379.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTGVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVIQGWAADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
     gene            5874..6287
                     /locus_tag="ACFJCW_000125"
     CDS             5874..6287
                     /locus_tag="ACFJCW_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HFC4150380.1"
                     /translation="MIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRNFPKHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLIRRFGIWLLAFAWLPVVGDALPLT
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            6335..6964
                     /gene="nth"
                     /locus_tag="ACFJCW_000126"
     CDS             6335..6964
                     /gene="nth"
                     /locus_tag="ACFJCW_000126"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HFC4150381.1"
                     /translation="MNRQIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKS"
     gene            7102..8601
                     /locus_tag="ACFJCW_000127"
     CDS             7102..8601
                     /locus_tag="ACFJCW_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HFC4150382.1"
                     /translation="MFKKYQYFALAALCAALLAGCEKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFAQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKNGYILTNTHVVAGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKNLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKASGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGEEITIKAKLGN
                     AAEHTGASSKTDEAPYTEQQSGTFSVESAGITLQTHTDSSGKHLVVVRVSDAAERAGL
                     RRGDEILAVGQVPVNDEAGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            8804..10324
                     /locus_tag="ACFJCW_000128"
     CDS             8804..10324
                     /locus_tag="ACFJCW_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HFC4150383.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWADGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TASPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTFGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRADV"
     gene            10381..11466
                     /gene="nagZ"
                     /locus_tag="ACFJCW_000129"
     CDS             10381..11466
                     /gene="nagZ"
                     /locus_tag="ACFJCW_000129"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HFC4150384.1"
                     /translation="MTVPHIPRGPVMAGIAAFRLTEEEKQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIEGFTRLPAMNVLGQIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCAVIGNRSFHRNPEAVARLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDGRSLDELEAADLAPFRIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGVGGIKERAR
                     ISFEAGCDIILVCNRPDLVDELRDGFTIPDNQDLAGRWQYMENSLGHEAVQAVIQTTG
                     FQAAQAFVAGLASPQDTAGGVKVGEAF"
     gene            11547..11623
                     /locus_tag="ACFJCW_000130"
     tRNA            11547..11623
                     /locus_tag="ACFJCW_000130"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:11581..11583,aa:Pro,seq:cgg)
     gene            complement(11959..12597)
                     /locus_tag="ACFJCW_000131"
     CDS             complement(11959..12597)
                     /locus_tag="ACFJCW_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HFC4150385.1"
                     /translation="MKKISVAPENPQYRIVEIFESLQGEGRNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGCLKTYPARNIIITGGEPTIQPHLDMLLDTLKAEGYFL
                     CLETNGLKPAPPQIDYVATSPKACYAAKYETNCIAEADEVRIVADGDVLAFCENMERK
                     IRARHYYLSPCEQDGVMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(12594..12962)
                     /locus_tag="ACFJCW_000132"
     CDS             complement(12594..12962)
                     /locus_tag="ACFJCW_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HFC4150386.1"
                     /translation="MKLLSTILVLLVAAEHFYIAWLEMTQIPGEKAAEMFKLPYEFME
                     QKRVQTLFGNQGLYNGFLAVGLLWAQFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAVLAV"
     gene            complement(13233..13667)
                     /gene="queD"
                     /locus_tag="ACFJCW_000133"
     CDS             complement(13233..13667)
                     /gene="queD"
                     /locus_tag="ACFJCW_000133"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HFC4150387.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDGTIKGG
                     AKDGMVMDFTDLKAIVKQHITDHFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYCRLKNAGLNVCRVKLWETPTSCAEYEGGEGIF"
     gene            complement(13755..14270)
                     /locus_tag="ACFJCW_000134"
     CDS             complement(13755..14270)
                     /locus_tag="ACFJCW_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HFC4150388.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAVPALKAAWFG
                     DTDKIHIDGWQVVEWADGYDIAVSETPKTKMPPENAPRLYFANVGGYRAGQLAEAHAL
                     GLFAAATPAEAKQKALQTLFTDYVRQHKDNLKDVDNLLALEHIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(14298..14957)
                     /gene="queC"
                     /locus_tag="ACFJCW_000135"
     CDS             complement(14298..14957)
                     /gene="queC"
                     /locus_tag="ACFJCW_000135"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HFC4150389.1"
                     /translation="MSNQKALVIFSGGQDSTTCLIQAIQTYGRENVQAITFRYGQRHA
                     VELERAEWIAQDLGVKQTVLDLSLMRQITHNALMDDTAAIETADNGVPNTFVDGRNAL
                     FLLYAAIFAKGQGIRHIIAGVCETDFSGYPDCRGVFVKSMNVTLNLAMDYDFQIQTPL
                     MYLTKAQTWALADEMGVLDYIREQTHTCYKGIVGGCRECPSCILRERGLAECLESKKA
                     V"
     gene            complement(15142..15346)
                     /locus_tag="ACFJCW_000136"
                     /pseudo
     CDS             complement(15142..15346)
                     /locus_tag="ACFJCW_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            15445..16671
                     /locus_tag="ACFJCW_000137"
     CDS             15445..16671
                     /locus_tag="ACFJCW_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HFC4150390.1"
                     /translation="MTFLQRWQGLADNKICAFAWFVIRRFSEGRVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYIDAFRDQANRLTA
                     IGSVMLVVTSLMLIRTIDNAFNRIWRVNTQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDSVLSSGAQQWADALKTAARLAFMTLLLWGLYRFVPNRFVPARQAFVGALITA
                     FCLETARFLFTWYMGNFDGYRSIYGAFAAMPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGRTLSVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELSELFKLFVYRPLPVERDHVNQAVDAVMTPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(16692..16973)
                     /locus_tag="ACFJCW_000138"
     CDS             complement(16692..16973)
                     /locus_tag="ACFJCW_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC4150391.1"
                     /translation="MIREEISAMPMGYETLIGDMGSALSGGQKQRIVLARALYCEPKI
                     LFLDEAASHLDIANEKAVNANLNGLSIIKIMAAHRKETVESADRKMSLG"
     gene            17002..17162
                     /locus_tag="ACFJCW_000139"
                     /pseudo
     CDS             17002..17162
                     /locus_tag="ACFJCW_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(17160..17390)
                     /locus_tag="ACFJCW_000140"
     CDS             complement(17160..17390)
                     /locus_tag="ACFJCW_000140"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC4150392.1"
                     /translation="MEVFAFLQNVSFKIGRGESLALIGRSGCGKSTFLDILSGNLPPE
                     SGKVMINGHDIYSLPPRFIRNLSAMVRQDDVL"
     gene            complement(17376..17927)
                     /locus_tag="ACFJCW_000141"
                     /pseudo
     CDS             complement(17376..17927)
                     /locus_tag="ACFJCW_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
     gene            complement(18029..18244)
                     /locus_tag="ACFJCW_000142"
     CDS             complement(18029..18244)
                     /locus_tag="ACFJCW_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150393.1"
                     /translation="MDFAHYLKHWKAAVLIYLAISILTDILCYFLNFDGVFYKGRFFS
                     VTVAGPVGALSFLAYLLYLKREENRSH"
     gene            complement(18258..18605)
                     /locus_tag="ACFJCW_000143"
     CDS             complement(18258..18605)
                     /locus_tag="ACFJCW_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150394.1"
                     /translation="MRELTMNEMTAVFGGTEGTWGHRGRVSGEWVGSKVGGALGSFAG
                     AFTGMAGGALVTGGNPAGIAIGGAGGGWVGAEGGSALGGHIGGFAGAKWGKMIDRRNC
                     QCGEDCHCDPCNC"
     gene            complement(18790..20064)
                     /locus_tag="ACFJCW_000144"
     CDS             complement(18790..20064)
                     /locus_tag="ACFJCW_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HFC4150395.1"
                     /translation="MNRPKQPFFRPEVAIARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITAKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEEMLRKYRFLSANDAVSKQETMNVEAELLEQKAKLDAYRREEA
                     GLLQEIRTQNLTLASLPKRHETEQSQLERTIADISQEVLDFEMRSEQIIRAGRSGYIA
                     IPNVEVGRQVDPSKLLLSIVPERTELYAHLYIPSSAAGFIKPKDKVVLRYQAYPYQKF
                     GLASGSVVSVAKTALGRQELSGLGMVSSDLAKSNEPVYLVKIKPDKPTITAYGEEKPL
                     QIGMTLEADILHEKRRLYEWVLEPIYSMSGRL"
     gene            complement(20125..20397)
                     /locus_tag="ACFJCW_000145"
     CDS             complement(20125..20397)
                     /locus_tag="ACFJCW_000145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150396.1"
                     /translation="MLPQPKEVPHGGILLQYLLLQRQFISCRKIFSVLYGANGVYNLT
                     RDWVNDAVNAPPYNGRPIFEIEHGLTAPATKADKSGNGYTDGTDYC"
     gene            complement(20472..20699)
                     /locus_tag="ACFJCW_000146"
     CDS             complement(20472..20699)
                     /locus_tag="ACFJCW_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150397.1"
                     /translation="MKNWKQFIFFVILVIACYQLLYSLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQEKEYKND"
     gene            complement(20708..21862)
                     /locus_tag="ACFJCW_000147"
     CDS             complement(20708..21862)
                     /locus_tag="ACFJCW_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC4150398.1"
                     /translation="MGIHLDFGISPKTFRQTYLYQKPKLFKGAVRNLEAASCKYINEI
                     YQRADPTAPLFHLRKKGAIVPKEEYVESFDDLGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHIARQVARFAGAHTIVSGYLAFGSDESYKNHWDARDMYAVQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHFA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQAKHEEVRKLIYQLIELDFLEIL"
     gene            22114..22407
                     /locus_tag="ACFJCW_000148"
     CDS             22114..22407
                     /locus_tag="ACFJCW_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150399.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPAGFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSAANQNPVGQAVGQRSDGIPANHTKEKP"
     gene            22404..23447
                     /gene="argC"
                     /locus_tag="ACFJCW_000149"
     CDS             22404..23447
                     /gene="argC"
                     /locus_tag="ACFJCW_000149"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HFC4150400.1"
                     /translation="MSKKIKAGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLLEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPGLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEAGDNFKAYGTAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGSDPETVLRDYYRDSPFMDI
                     LPAGSTPETRSVRGANLCRISIRQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     EETHGLGGIPLLP"
     gene            complement(24041..26083)
                     /gene="recG"
                     /locus_tag="ACFJCW_000150"
     CDS             complement(24041..26083)
                     /gene="recG"
                     /locus_tag="ACFJCW_000150"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HFC4150401.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLGRLKLPRLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRVSGTAAALRGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTHPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVCLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLSIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRL
                     VNNVRRAEVEGFVLGTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPEPNIG
                     LVHGRMKAAEKAEVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAGESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV"
     gene            complement(26169..26612)
                     /gene="secB"
                     /locus_tag="ACFJCW_000151"
     CDS             complement(26169..26612)
                     /gene="secB"
                     /locus_tag="ACFJCW_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HFC4150402.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGDPEVDMRVST
                     GSQKLEDGYYDVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            complement(26634..26891)
                     /gene="grxC"
                     /locus_tag="ACFJCW_000152"
     CDS             complement(26634..26891)
                     /gene="grxC"
                     /locus_tag="ACFJCW_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HFC4150403.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHAAGVGHIDEIRVDASPEAFAE
                     MQRLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            27110..28603
                     /gene="rng"
                     /locus_tag="ACFJCW_000153"
     CDS             27110..28603
                     /gene="rng"
                     /locus_tag="ACFJCW_000153"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HFC4150404.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSGHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNIEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            complement(28638..29889)
                     /locus_tag="ACFJCW_000154"
                     /pseudo
     CDS             complement(28638..29889)
                     /locus_tag="ACFJCW_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            complement(29971..30600)
                     /locus_tag="ACFJCW_000155"
     CDS             complement(29971..30600)
                     /locus_tag="ACFJCW_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC4150405.1"
                     /translation="MSASLKDGGYAVDWVKNGAQVAAAAAAQPYDLMLLDLGLPGRDG
                     LDVLSEIRAAGCTVPVLIVTARDDLYSRLNGLDGGADDYIVKPFDMAEFKARMRAVLR
                     RGSGQAQACLSNGALSLNPATYQVEIIAEGRQVALSNQEFSVLQALLARPGVILSRSD
                     SEDKVYGWGGEVESNAVDFLIHGLCKKLGKESIQNVRGVGWLMPRQDAV"
     gene            complement(30868..32181)
                     /locus_tag="ACFJCW_000156"
     CDS             complement(30868..32181)
                     /locus_tag="ACFJCW_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HFC4150406.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLIGALLAGFDVS
                     QLKEFYSGGTKSVTQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLSVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPRGGPI
                     GRVASVLGADVGELYKPLLTVQIIGVVFILVLSLFLGVREKRRIVRELGALPAVADLI
                     KPAPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDLVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILVSSIAAGIVPLP"
     gene            complement(32559..33131)
                     /locus_tag="ACFJCW_000157"
     CDS             complement(32559..33131)
                     /locus_tag="ACFJCW_000157"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HFC4150407.1"
                     /translation="MIVAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGH
                     LPLYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGS
                     KPNADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLF
                     DENGKLIDSARDFVQSYINQFVGLIERNAK"
     gene            33290..34699
                     /gene="dacB"
                     /locus_tag="ACFJCW_000158"
     CDS             33290..34699
                     /gene="dacB"
                     /locus_tag="ACFJCW_000158"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HFC4150408.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRAGIPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLRDKGIRNITGRLMLDHSLWGEVGSPDHFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAAGSTDILTDPPLPHIFAQNNLKITASQAACPSVKKLMRASF
                     SGNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNRWLLGGGRISDGIGIADTPEG
                     AQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGGDGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVAKNI
                     ISGGDGWLDAKLMCKERRA"
     gene            complement(34764..35933)
                     /gene="metK"
                     /locus_tag="ACFJCW_000159"
     CDS             complement(34764..35933)
                     /gene="metK"
                     /locus_tag="ACFJCW_000159"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HFC4150409.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSEPGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPAISHEELSKAVIEQIIKPVLPP
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLIALV
                     CEHFDLRPKGIVQMLDLLRPIYGKSAAYGHFGREEPEFTWERTDKAASLKAAAGL"
     regulatory      complement(36116..36226)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            36279..37172
                     /locus_tag="ACFJCW_000160"
     CDS             36279..37172
                     /locus_tag="ACFJCW_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC4150410.1"
                     /translation="MFRLQFRLFPPLRTAMHILLTALLKCLSLLSLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGLNPDTQTVKAVFAETAKCGLELAPAFFKKPEDIETMF
                     KAVHGWEHVQQALDKGEGLLFITPHIGSYDLGGRYISQQLPFHLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTGIQGVKQIIKALRAGEATIILPDHVPSPQEGGGVWADFFGKP
                     AYTMTLAAKLAHVKGVKTLFFCCERLPDGQGFVLHIRPVQGELNGNKAHDAAVFNRNT
                     EYWIRRFPTQYLFMYNRYKTP"
     gene            complement(37217..38281)
                     /gene="tsaD"
                     /locus_tag="ACFJCW_000161"
     CDS             complement(37217..38281)
                     /gene="tsaD"
                     /locus_tag="ACFJCW_000161"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HFC4150411.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRSHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYELLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNNICRAFQDAVVEVLEAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPMAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWSLSEIVK"
     gene            complement(38397..39584)
                     /gene="ccsB"
                     /locus_tag="ACFJCW_000162"
     CDS             complement(38397..39584)
                     /gene="ccsB"
                     /locus_tag="ACFJCW_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HFC4150412.1"
                     /translation="MTEHYKTLPEHELLIQKSLIRNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAVQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEEKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(39577..41529)
                     /locus_tag="ACFJCW_000163"
     CDS             complement(39577..41529)
                     /locus_tag="ACFJCW_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HFC4150413.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGPFWTRIFDF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVRGFQGKTVSREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLAGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGMLVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLRDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPILQDKDYFWLTGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGEGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKGQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWRQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVFMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(41807..42430)
                     /locus_tag="ACFJCW_000164"
     CDS             complement(41807..42430)
                     /locus_tag="ACFJCW_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC4150414.1"
                     /translation="MRRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            42637..43266
                     /gene="yihA"
                     /locus_tag="ACFJCW_000165"
     CDS             42637..43266
                     /gene="yihA"
                     /locus_tag="ACFJCW_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HFC4150415.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRH
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(43386..45782)
                     /locus_tag="ACFJCW_000166"
     CDS             complement(43386..45782)
                     /locus_tag="ACFJCW_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HFC4150416.1"
                     /translation="MIKKILTTCFGLFFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRRELYE
                     KYGEDAYTQGFKVYTTVRTDHQKAATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVALDRRALGFAARAVDNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRPSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRAGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLM
                     LDNSGIAPQPSRRAKEDDEAAVENEQQGRSDETRQDVQETPVLPSNTDSKQQQLDSLF
                     "
BASE COUNT        11070 a        12944 c        11385 g        10387 t
ORIGIN      
        1 gataaaatca attttccgta ttcaatactg ctccaatcaa ttcctgcgca ccgtcgtccg
       61 ccagtttttt ggcaaccgca cgtccaagcg catcggcata tccggcaggg gcttgcgcgt
      121 ccgcctgcaa cacaatcgat ccgtcgggat gcccgaccaa tccgcgcaag atcagcagcc
      181 cgttttcttc agtgcaatac gcggccagcg gcacttggca gcttccgccc aaagcgcgcg
      241 ccaaagcgcg ttcggcggta acgcaggcgt gtgtggtatc gtggtttaac ggcttcaaga
      301 cttcgtacaa atcttcgcga tgcgtggcaa tttcaatacc caatgcgcct tgtccggcgg
      361 caggcaggct gtcggattcc gacaaaatca tgcggatgcg ttcatccaat tccagacgct
      421 gcaacccggc ggcagccaag ataattgcat cgtattcgcc gttgtcgagt ttggacaaac
      481 gggtttgtac attgccgcgc aggggtttaa tcaccaaatg cggatagcgc gcgcgcaact
      541 gggcttcgcg gcgcaggctg gatgtgccga caaccgcgcc ttcgggcatt tcttccaaac
      601 gcgcgtatcg gttggacaca aacgcgtcaa acggattggc gcgttcgctg atggcggcaa
      661 gggcgaagcc ttcgggcaaa tccatcggca cgtccttaat cgaatgcacc gccaaatcgg
      721 cgcgcccgtc ttgaagggat tgttccaact ctttgacaaa caagcctttc ccgccgactt
      781 ttgacaaagt tctgtccaaa atccggtcgc cgcgcgtggt catgcccaaa atttcgactt
      841 cgcaatcggg atacagcgcc ttcagacggc cttggatatg tttcgcctgc cacatggcaa
      901 gcaggctttc gcggctggcg ataacaagtt ttttcgggtt catgttcaat gcgttcaaag
      961 aatggaaacg gcgtggagtc tatcatattt tgaacgtttc ttcagacggc accgtcaggt
     1021 ctatgttata tttacgccca caaaacacga aacccgccac aatgaaacgc gccaaaaaat
     1081 accctttctt aacgttgcag cggcaacgtt tccatttgaa ctttgaaaac gcctcttccg
     1141 ccgccggcat ccccgccgaa cgcgattttt accgctgggc gtggtctgcc ttgaaaaacg
     1201 aatacctccg cgccgacatc ggtttgattc ttttggacga agaagaagcc cgcgcctaca
     1261 accgcgacta ccggggcaaa gattatgcca ccaatgtatt gagtttcgcg ctcaacgaag
     1321 gcgaaatcct gccctgccaa gtttcggaaa gactgtacgg cgatttgatt atctgcccgc
     1381 aagtcgtttt aaaagaagcc gccgaacagg gcaaaacgcc tgaacggcat tttgcccact
     1441 taaccataca cggcacgctg cacctgatgg gatacgacca catcaaagac gatgaggccg
     1501 aaataatgga agccgaagaa atccgcctga tgcgggcggc aggctatccc aacccctacc
     1561 gagaggacgg acattaaaat ggacggcgca caaccgaaaa caaatttttt tgaacgcctg
     1621 attgcccgac tcgcccgcga acccgattcc gccgaagacg tattaaacct gcttcggcag
     1681 gcgcacgaac aggaagtttt tgatgccgac acactgaccc ggctggaaaa agtattggac
     1741 tttgccgagc tggaagtgcg cgatgcgatg attacgcgca gccgcatgaa cgtattgaaa
     1801 gaaaacgaca gcatcgaacg catcaccgcc tacgtcatcg ataccgccca ttcgcgcttc
     1861 cccgtcatcg gcgaagacaa agacgaagtt ttgggcattt tgcacgccaa agacctgctc
     1921 aaatatatgt tcaaccccga gcagttccac ctgaaatccg tcttgcgccc tgccgttttc
     1981 gtgcccgaag gcaaatcttt gaccgccctt ttaaaagagt tccgcgaaca gcgcaaccat
     2041 atggcaatcg tcatcgacga atacggcggc acgtcgggtt tggtcacctt tgaagacatc
     2101 atcgagcaaa tcgtcggtga catcgaagac gagtttgacg aagacgaaag cgccgacaac
     2161 atccactccg tttccgccga acgctggcgc atccacgcgg ctaccgaaat cgaagacatc
     2221 aacgcctttt tcggtacgga atacggcagc gaagaagccg acaccatcgg cggcttggtc
     2281 attcaggaat tgggacacct gcccgtgcgc ggcgaaaaag tccttatcgg cggtttgcag
     2341 ttcaccgtcg cccgcgccga caaccgccgc ctgcacacgc tgatggcgac ccgcgtgaag
     2401 taagcagagc ctgcccgcac cgccgtttct gcacagttta ggatgacggt acggtcgttt
     2461 tctgtttcaa tccgccccat ccgccaaaca taaaaatgcc gtctgaaacc ggaaaacagg
     2521 ttcagacggc atttcgctta tccgcttatt ttttgctcaa agtcagcccc gtccagccga
     2581 ataacagggt taaagccaaa ctcaaatagc agaaaaaggc ataaggcaga tattcccaaa
     2641 cgggtacgcc aagggcgtgg ctgataaata cgccgcacac gctccacggc acgagcgggt
     2701 taatcaccgt ccccgcatct tccagagtcc gcgacaggtt gcgcgaatgc aggccgagtt
     2761 tgtcgtaaac gggtttgaac gtttctcccg aaagcaggat gctcaaatat tgctctccaa
     2821 tcaggaaatt gaccccgacc gaagtcatgg caacgctgaa cgtcgcgcgt ccggcattcg
     2881 tcaagaaggt acggacggcc tccagcaggg aaggaatcac accgagcgca aacagcagcc
     2941 cgcccaaact cataccgagg ataacgatgg tctgcgtaaa gaacatactc tccaagccgc
     3001 cgcgcgaaat cagtttggca atgtctttaa acgcttcgcc ttcgagtttg tagccgccat
     3061 aaaaccacgc gccgagctga cgcagatcgg gcgtgctgtg cagatacgtt acggcaacgg
     3121 cggcaatgac ggtaaagagc atggcgacca cggcattgac gcgcatcaat gccaaaacga
     3181 ccaacagtgc aaacggaatc agcgaatagc cgtgcaccaa tcccgtggct tcaagctggc
     3241 tgcggaagga ttcgacgctg ttcaaatcct gcgcggcgac gctgggaaga agccaaagca
     3301 tcagtgccgc gctgataagc cacgcgggga tggtggtgta catcatgttt ttgatgtgtt
     3361 caaacaggtc gataccgacg atggacgcgg aaatgcccgt ggtgtcggaa agcggggaca
     3421 ttttatcgcc gaaaaacaca ccggaaacaa tcgcgcccgc cgtcatcgcc atatcggcct
     3481 gaaacgccgc cgccatcccc ataaaggcaa cgccgacagt ggcgcaggcg gtcaggctgc
     3541 tgccgatgga cacgccgatg acggaacaca gcgcgaaggc ggaaaaataa aaataagtcg
     3601 gggaaatcag cccgaaaccg taatacatca gcgtcggaat cgcgccgctc atcatcagcg
     3661 cgctgaccat cagcccgatg aagaaaaaca ggtaaaccgc gcccataccc tgattcaacg
     3721 cgcctatcat ccctgcctgc atatcgttgt atttcaaacc gcgcgccaag ccgtacaaaa
     3781 tcagcacgac gatggcggca ataatggaca tatgcggcag ccactccaat gaaatgatgg
     3841 tatagcccat tgcggcaatc agagcgacga cgacggcaag tgcctcaccg cgcggcatat
     3901 cgagtaagga tttgaaagca aacatgattc tttgcccgat ttgatataaa gttaacggat
     3961 tctaacacac catgccgaat ctgcccgacg ttttcagacg gcattttagc gttttacaaa
     4021 agccgggcag aaacaaaacg gcaattttct cgatttaaat taattttttt gaaatataat
     4081 ttttattttt ttatttgttg gcatataaga cttttatgga ttgaagtatt aaaacctcgg
     4141 cacacacgcc gcaaacaccg gtacgcaaaa atgccgtctg aaagatgttc agacggcatt
     4201 tctcaagaaa aagattattt gtccgcccta tatccgtaca ccgcaaaaaa cacgatatac
     4261 aggtaacaga taacggaaac gacaaacgaa gacatcaggg tgtaagtatc cgccgcccaa
     4321 ccttgaatta ccggcacgac cgcaccgccg acaatcgcgg tacacagcac accggaagcc
     4381 gcgttggtga atttgcccaa ccctttggtt gccaaagaga aaatcgtcgg gaacataatc
     4441 gagttgaaaa aaccgatggc aagcagcgac cacatcgcca catccgcatt gccgctgccc
     4501 gtcgccatcg cgacggcaag cagcacgacc gcagccgatg cgttaaacgc caaataacgg
     4561 ttgggcgcga atttcgccat taccgccgaa ccgaggaaac gtccgaccat cgcaccgccc
     4621 caataaaacg acaggtaatg cgcggcagaa gcatgatcca gccctttcag ataacccaac
     4681 acattgacca tcagcgaacc gatagacacc tccgcaccga cgtagcagaa aatgcctgcc
     4741 gtaccgaaca cgagatgttt gtattgccat acgccggttt tgccgtcgtg gttgtgcgcg
     4801 ctttcctcgg cggcaatttt gcgcgcgtcg ggcagccgga tcattttcac gaaaacggca
     4861 aggataatca gcagccccgc cagtcccaaa tagggaatct gtacggaaga aatctgttcc
     4921 gccttgctga cggtttgggt tgcgtccgcc aaaatcagga acgcgccgat ttgaggcgca
     4981 atggtcgtac ccaaagcgtt aaacgcctga accagcgtca gcgttgccga ttccttgccg
     5041 ggtttcgcca gcagggtaac ataaggatta ccggcgacct gaagcagcgt tacgccggaa
     5101 gccaaaataa acaacgcgcc caaaaatacc gcgtaagaat ggctgcccgc agcaggataa
     5161 aacagcaggc acccgaccgc cgtcagcaga aagccgccga taacgccgtt tttgtagccg
     5221 actttgccga caaaagcccc catcgggatg gacattaccg cataggcggt aaaaaagcaa
     5281 aattgaatca gcatcgcctg aacgtaagag aggtcgaaaa tttctttcaa atgagggata
     5341 aggatgtcgt tcatgcaggt aataaaaccc atcatgaaga acagcgtggt caagacgacc
     5401 aatggggacg tatggttgtt ttgtgattgc gcagacatga tttgcctttc gtggtgtcgg
     5461 aatattgccc gtttcaagaa aatagaaatt gacatttctt aacggcaatg caaatcatac
     5521 tgatatttga acattttgca aactttatcg gatgcaggca atgcgccgat ctgaaattca
     5581 agcagcagaa attaatattt tacagttgtt tgcataggtt ttaatagatt ttaaaaaatt
     5641 ccggcgggct tgcaaaaacc gttcccaata aaatgaaaat cctccgccgt atccggaaaa
     5701 ttcggaaatg ccgcatcggg gcatcaaaac cggagcggaa agaatgtcgt atgcccgaca
     5761 aaaaaggggc atacggctgt gccgtatttt tgcaccgtcc tccgcccttc ggcgggggcg
     5821 tgaaaatacc gtataatccg tcgccgattt ttacctgttt gggactgttt gcaatgatac
     5881 cctcctacac ctacgccgcc ctcgcttttt ccgccttcac ttccgccacc ctcctgcccg
     5941 gcacgtccga agccgccttc gccctgttcg tccgcaactt ccccaaacac gcatacggcg
     6001 cgttgctgtg cgccggcctt gccaacggat tgggcagtat ggtttcctat tggatgggac
     6061 gtttgctgcc ttcccgaaaa atgccgtctg aaaaaacact gaatctgata cggcgtttcg
     6121 gtatttggct gcttgcgttt gcgtggctgc ccgtcgtcgg cgacgcactg ccgcttaccg
     6181 ccggctggct gcggttgaat ccgtggacaa gcgggctgat gctggttatc ggcaaaacgg
     6241 cgcgttacgc cttcattctg tggggaatgc aatattacgc cgcctgaacc gtgcgttata
     6301 atgccgaccg cacaaaccga ctgcacaaaa aaaaatgaac agacaaatcc gccaagaaat
     6361 cttcgagcgt ttccgcgccg ccaaccccca tccgaccacc gagctgaatt tcaactcccc
     6421 tttcgagctt ttaatcgccg ttctgctttc ggcgcaggcg accgatgtcg gcgtaaacaa
     6481 ggcgacggcg aagctgtttc cggttgccga tacgccgcag gcgatgctgg atttgggctt
     6541 ggacggcgtg atggaataca cgaaaaccat cgggctgtat aaaaccaagt ccaaacacat
     6601 tatgcaaacc tgccgcatcc tgctggaaaa atacaacggc gaagtgccgg aagaccgcga
     6661 ggctttggaa tcgttgcctg gcgtggggcg caaaacggca aacgtggtat tgaacacagc
     6721 gttcggacac cccgttatgg cggtcgatac gcatattttc cgcgtgtcca accgaaccaa
     6781 aatcgcaccc ggaaaagatg tacgcgaagt cgaagacaaa ctgatgcgct tcattcctaa
     6841 agaatttctg atggacgcgc accactggct gattttgcac ggacgctaca cctgcaaggc
     6901 tttaaagccg caatgccaaa cctgcatcat caacgatttg tgcgaatatc ccgccaaatc
     6961 ctgaccgccg ccgcccttca aaatgaaacg cttgaaaatt cggacggacg ttgtagaatt
     7021 tcaacctatg ccgtctgaag ccgacaaaat gcgcttcaga cggcattaaa gccggtaccg
     7081 gcatccgaca aaggacaaaa cgtgttcaaa aaataccaat acttcgcttt ggcggcactg
     7141 tgtgccgcct tgctggcagg ctgcgaaaag gcaggcagct ttttcggtgc ggacaaaaaa
     7201 gaagcatcct tcgtagaacg catcgaacac accaaagacg acggcagtgt cagtatgctg
     7261 ctgcccgact ttgcccaact ggttcaaagc gaaggcccgg cagtcgtcaa tattcaggca
     7321 gcccccgccc cgcgcaccca aaacggcagc ggcaatgccg aaaccgattc cgacccgctt
     7381 gccgacagcg acccgttcta cgaatttttc aaacgcctcg tcccgaacat gcccgaaatc
     7441 ccccaagaag aagcagatga cggcggattg aacttcggtt cgggcttcat catcagcaaa
     7501 aacggctaca tcctgaccaa tacccacgtc gttgccggta tgggcagtat caaagtcctg
     7561 ctcaacgaca agcgcgaata taccgccaaa ctcatcggtt cggatgtcca atccgatgtc
     7621 gcccttctga aaatcgacgc aacggaagag ctacccgtcg tcaaaatcgg caatcccaaa
     7681 aatttgaaac cgggcgaatg ggtcgctgcc atcggcgcgc ccttcggctt tgacaacagc
     7741 gtgaccgccg gcatcgtgtc cgccaaaggc agaagcctgc ccaacgaaag ctacacaccc
     7801 ttcatccaaa ccgacgttgc catcaatccg ggcaattccg gcggcccgct gttcaactta
     7861 aaaggacagg tcgtcggcat caattcgcaa atatacagcc gcagcggcgg attcatgggc
     7921 atctcctttg ccatcccgat tgacgttgcc atgaatgtcg ccgaacagct gaaaaacacc
     7981 ggcaaagtcc aacgcggaca actgggcgtg attattcagg aagtatccta cggtttggca
     8041 cagtcgttcg gtctggataa agccagcggc gcattgattg ccaaaatcct tcccggcagc
     8101 cccgcagaac gtgccggcct gcaggcgggc gacatcgtcc tcagcctcga cggcggagaa
     8161 atacgttctt ccggcgacct tcccgtcatg gtcggcgcca ttacgccggg aaaagaagtc
     8221 agcctcggcg tatggcgcaa aggcgaagaa atcacaatca aagccaagct gggcaacgcc
     8281 gccgagcata ccggcgcatc atccaaaaca gatgaagccc cctacaccga acagcaatcc
     8341 ggtacgttct cggtcgaatc cgcaggcatt acccttcaga cacataccga cagcagcggc
     8401 aaacacctcg tcgtcgtacg ggtttccgac gcggcagaac gcgcaggctt aaggcgcggc
     8461 gacgaaatcc tcgccgtcgg gcaagtcccc gtcaatgacg aagccggttt ccgcaaagct
     8521 atggacaagg caggcaaaaa cgtccccctg ctggtcatgc gccgtggcaa cacgctgttc
     8581 atcgcattaa acctgcaata acgcacataa tttaaccaaa atatttttaa atgataaaat
     8641 gcccgtcaat accgattaac gggcatttta caaaaatcag ttggttgatt ttaaacaaat
     8701 attttttacg acaaaaaata tttccaccca ttttgccaac aaaacccaaa ccggaggcgg
     8761 acagataccc acccatccgg acgcttaaca ccccccataa accatgcagc tgattgacta
     8821 ttcacattca tttttctcgg ttgtgccacc ctttttggca ctggcacttg ccgtcattac
     8881 ccgccgcgta ctgctgtctt taggcatcgg tattttggtc ggcgttgcct ttttggtcgg
     8941 cggcaacccc gtcgacggtc tgacacacct gaaagacatg gtcgtcggct tggcttgggc
     9001 agacggcgat tggtcgctgg gcaaaccaaa aatcttggtt ttcctgatac ttttgggcat
     9061 tttcacttca ctgctgacct actccggcag caatcaggcg tttgccgact gggcaaaacg
     9121 gcacattaaa aaccggcgcg gcgcgaaaat gctgaccgcc tgcctcgtgt tcgtaacctt
     9181 tatcgacgac tatttccaca gcctcgccgt cggtgcgatt gcccgccccg ttaccgacaa
     9241 gtttaaagtt tcccgcgcca aactcgccta catcctcgac tccactgcct cgcccatgtg
     9301 cgtgctgatg cccgtttcaa gctggggcgc gtcgattatc gccacgcttg ccggattgct
     9361 cgttacctac aaaattaccg aatacacgcc gatggggacg tttgtcgcca tgagcctgat
     9421 gaactattac gcgctgtttg ccctgattat ggtattcgtc gtcgcatggt tctccttcga
     9481 catcggctcg atggcgcgtt tcgaacaggc tgcgttgaac gaagcccacg acgaaaccgc
     9541 cgcttcagac gctaccaaag gtcgtgttta cgcattgatt attcccgttt tggccttaat
     9601 cgcctcaacg gtttccgcca tgatctacac cggcgcgcag gcaagcgaaa ccttcagcat
     9661 tttgggggca tttgaaaata ccgacgtaaa cacttcgctg gtattcggcg gcacttgcgg
     9721 cgtgcttgcc gtcgtcctct gcacgttcgg cacgattaaa accgccgatt atcccaaagc
     9781 cgtgtggcag ggtgcgaaat ccatgttcgg cgcaatcgcc attttaatcc ttgcctggct
     9841 catcagtacg gttgtcggcg aaatgcacac gggcgactac ctctccacgc tggttgcggg
     9901 caacatccat cccggcttcc tgcccgtcat cctcttcctg ctcgccagcg tgatggcgtt
     9961 tgccacaggc acaagctggg ggacgttcgg cattatgctg ccgattgccg ccgccatggc
    10021 ggtcaaagtc gaacccgcgc tgattatccc gtgtatgtcc gcagtaatgg cgggggcggt
    10081 atgcggcgac cactgttcgc ccatctccga cacgaccatc ctgtcgtcca ccggcgcgcg
    10141 ctgcaaccac atcgaccacg ttacctcgca actgccttat gccctgacgg ttgccgccgc
    10201 cgccgcatcg ggctacctcg cattgggtct gacaaaatcc gcgctgttgg gctttggcac
    10261 gaccggtatt gtattggcgg tgctgatttt tctgttgaaa gataaaaaac gcgccgacgt
    10321 ttgaccttcc cccctgttca gacggcatat gccgtctgaa gttttttgga gcaaaccgca
    10381 atgaccgtcc cccatattcc gcgcggcccc gtcatggcag gcattgccgc cttccgcctg
    10441 accgaagagg aaaagcaacg cctgctcgat cccgcaatcg gcggcatcat cctcttccgc
    10501 cgcaacttcc aaaacatcga acaactcaaa acactcaccg ccgaaatcaa agccctgcgc
    10561 acacccgaac tcattatcgc cgtcgatcac gaaggcggca gggtgcaacg gtttatcgaa
    10621 ggcttcaccc gcctgcctgc aatgaacgtt ttagggcaaa tttgggacaa agacggcgcg
    10681 tccgccgccg aaaccgctgc cggacaagtc ggccgggttt tggcaaccga gctttccgcc
    10741 tgcggcatcg atttgtcctt cacgcccgtc ttagatttgg actggggaaa ctgcgccgtc
    10801 atcggcaacc gcagcttcca ccgcaatccc gaagcggtcg cccgcctcgc cctcgccctt
    10861 caaaaaggtt tggcaaaagg cggtatgaaa tcatgcggca aacatttccc cggacacgga
    10921 tttgtcgaag gggacagcca tttggtgcta cccgaagacg ggcgcagcct cgacgaactc
    10981 gaagccgccg acctcgcccc cttccgcatt atgagccgcg aaggtatggc ggcggtcatg
    11041 cccgcccacg tcgtttatcc gcaagtggac acaaagcccg cagggttttc cgaaatctgg
    11101 ctgaaacaga ttttgcgccg cgacatcggg ttcaaaggcg tgattttttc tgacgatttg
    11161 accatggagg gcgcgtgcgg agtcggcggc atcaaagaac gcgcccgcat ttcctttgag
    11221 gcaggttgcg acatcatatt ggtctgcaac cgtcccgact tggtcgatga attgcgcgac
    11281 ggtttcacca ttcccgacaa ccaggatttg gccggacgtt ggcaatacat ggaaaactcg
    11341 ctcggtcatg aggcggtaca agccgttata cagacaacgg gtttccaagc ggcgcaagcc
    11401 tttgttgccg gccttgcctc gccgcaggac acggcgggcg gcgtaaaagt cggagaggcc
    11461 ttttaaatcc gcccgacacg cggcaaaaag gcaaaacggt ataggcacgc cgtatttttt
    11521 gcgctataat cacaccttaa ttaattcgga atgtagcgca gcccggtagc gcacttcgtt
    11581 cgggacgaag gggtcggagg ttcgaatcct ctcattccga ccatattcag accgcctcga
    11641 catcgattgc cggggcggtt tttccctttt ggcggcaaca aaaaaatgcc gtctgaaaca
    11701 gaatgctgtt tcagacggca tttcgttttc cccaatcctg ccatttgcgc gcactgacaa
    11761 agggtatcgg caaggttcaa aagaccatcg gaatctagga agcctggcgt gtacccaacc
    11821 gcggcatctt attcattaag gcttcgtcct gattgggcgg cggaaatgtc ggcagtttca
    11881 cgcggaagcg gcacactttc cccgtatgtc aaacatcggc aaaacggtac gcctgccctt
    11941 tgagttacac tgcttaaact actctattcc cgcccatttg tgcgtctgca cgctcaactg
    12001 ccaatgcacg ggcgcgtcgg ggcggctgtt taaaataccg atttggcgga tggtgtcgta
    12061 gatgttcatc acgccgtctt gttcgcaggg agaaagatag taatggcgcg cacggatttt
    12121 gcgttccata ttttcgcaaa acgcaaggac atcgccgtcg gcaacaatcc gtacttcgtc
    12181 ggcttcggcg atgcagttgg tttcatactt ggcggcgtag caggctttgg ggctggtggc
    12241 gacatagtcg atttgcggcg gcgcgggctt gagcccgttg gtttcgagac agaggaaata
    12301 gccttccgcc ttgagcgtgt ccagcagcat atcgagatgc ggctggatgg tcggctctcc
    12361 gccggtgatg atgatgttgc gggcgggata agttttcaga cagcctaaga tgtcggacag
    12421 gctcatcata ccaaatgtca aataatcggt atcacaccag ccgcacgcca gattgcattt
    12481 gcccaagcgg acgaaaacgg caggcatacc cgtgtttcgg ccctcacctt gcaggctttc
    12541 aaagatttcg acgatgcggt actggggatt ttcgggggcg acgctgattt ttttcatacc
    12601 gccaacaccg ccgccgccaa aaatgcgggc aaaccttgtt tgacgagtat gcctttgttg
    12661 ccggacgaaa acgcacccca cgcggcggca atcaggacga agccgagaaa cagtaccgtc
    12721 gcgccgtaca cggcattatc cggagcggca aactgcgccc acaaaagccc gacggcaaga
    12781 aagccgttgt acagcccttg gttgccaaac agggtctgca cgcgtttctg ttccataaat
    12841 tcgtaaggca gcttgaacat ttccgccgct ttttcgccgg gaatctgtgt catttcaagc
    12901 caggcgatgt agaaatgttc ggcggcgacg aggaggacga gaatggtgga gaggagtttc
    12961 atgggtgttc ctttcaatgg gtgtgccggt atgaaatgcc gtctgaaaaa acggggaatc
    13021 cgtgcaggag aaaaaaccgc tttacggtat agtggattaa caaaaatcag gacaaggcgg
    13081 cgaagccgca gacagtacag atagtacgga accgattcac ttggtgcttc agcaccttag
    13141 aaaatcgttc tctttgatct gaggcgaggc aacgccgtac cggtttaaag ttaatccacc
    13201 ataccttatt tgaattgact atatcgatac gttcaaaata ttccctcccc cccttcatac
    13261 tccgcgcacg atgtcggcgt ttcccacaat ttgacgcggc acacgttcag ccccgcgttt
    13321 ttcagacggc agtacatttc gaccgccata ttttcggcag ttgtgcggca gggcaggcgc
    13381 agggttttca tgttccagcc ttccaaaagc gcggcgattt gagattcgcg cccgttgccg
    13441 ccgtggtaga tgaaggcgtg gtcgaaatgg tcggtaatgt gttgtttcac aatggctttc
    13501 aagtcggtaa agtccatcac cataccgtct ttcgctccgc ctttgatggt gccgtctgaa
    13561 acggtgattt cgagtttgta ggtatgtccg tgcaggtttt ggcatttgcc gtcatgcccg
    13621 tcgagcatat gcgaggagtc gaaggtaaat atcttggtaa ttttcatccc gattcctttt
    13681 cagtgaaaac cccgccgctt tccgcccgga gggtggcttg atgtgtcgtt ttgcgtggaa
    13741 acatatccgc tgcttcaaat gggcaaatag ccttgaaagc cgatttcggc gggtttgccg
    13801 tgcggattcg gggtcaggcg gatatggaaa ttgccgatgt gctcgagcgc aagcaggttg
    13861 tccacgtctt tcaagttgtc tttatgctgc cgaacatagt cggtgaacag ggtttgcagg
    13921 gctttttgtt tggcttcggc aggcgtggcg gcggcgaaca gccccaacgc gtgcgcctcg
    13981 gcaagctgcc ccgcgcgata gccgccgaca ttggcaaaat acaggcgcgg agcgttttca
    14041 ggcggcattt tcgttttggg cgtttcggat acggcgatgt cgtaaccgtc cgcccattcg
    14101 acaacctgcc aaccgtcgat gtggattttg tccgtatcgc cgaaccacgc ggctttgagt
    14161 gcggggacgg cttcgcggta gtcgtcgcac acggcaaatt ggatgtcgtg cacttcgata
    14221 ttcgaccggc cggcattgcc gccgaggtaa aacatatgga gcttgggcat atcgtattcc
    14281 ttgtgctttg cgcgcgttca gacggccttt ttactttcca gacattccgc cagcccgcgt
    14341 tcgcgcaaga tacagctcgg gcattcgcgg cagccgccga cgataccctt gtagcaggtg
    14401 tgggtctgtt cgcggatgta gtccaacacg cccatttcgt ccgccaacgc ccacgtttgc
    14461 gccttggtca ggtacatcag cggcgtctgg atttgaaaat cgtagtccat cgccagatta
    14521 agggtaacgt tcatggattt gacgaacacg ccgcggcagt cgggatagcc cgaaaaatcg
    14581 gtttcgcaca cgcccgcgat gatgtgccgg ataccctgcc ctttggcaaa aatggcggcg
    14641 taaagcagga aaagcgcgtt acgcccgtcc acaaaggtat tgggaacgcc gttgtcggcg
    14701 gtttcgatgg cggcggtatc gtccatcagg gcattgtgcg taatctgccg catcaggctc
    14761 aagtcgagta cggtttgttt gacgcccaaa tcctgcgcga tccactctgc gcgttccagc
    14821 tcgacggcat ggcgttgccc gtatcggaag gtaatggctt ggacgttttc gcgcccgtag
    14881 gtttggattg cctgaatcag gcaggtggtc gaatcctgac cgcccgagaa gatgaccaag
    14941 gctttttggt ttgacatatc gaatcctagt tttggtaacg cgggaggttt gcgaaccgcg
    15001 aagttggaca gtaaagacgc ggattataca ggcaaacgcg ttcagacggc atctgaacgc
    15061 catgccgtct gaacacgcgg cgtatgccga cttgacggcg agttccgcca agcgtctgcc
    15121 ttgtgcgaag gcgatattgt tttcttcggc ggtcaggacg ggagccgctg tcgggaatat
    15181 cttttttgac ggcttcgcag acggcggaca ctttggggac ggtgcgcaat acggcttcgc
    15241 aaccttcaac gctgtcgatg ccgcgagtga ttcggcgtgc gggattgcgg gtgctgccgt
    15301 tttgggaata gtagaggacg aggattttga ggggatttgg gttcatgggc ggattccgtt
    15361 aaaatagttt ggtgttcaga cggcataacg gttgtccaga tgccgtctga aacagtttga
    15421 aaacatgaaa cctggtaaga gattatgacc tttttacaac gttggcaagg tttggcggac
    15481 aataaaatct gtgcatttgc atggttcgtc atccgccgtt tcagtgaagg gcgcgtaccg
    15541 caggcagcgg cgagcatgac gtttacgaca ctgctggcac tcgtccccgt actgaccgta
    15601 atggtcgcgg tcgcttcgat tttccccgtg ttcgaccgct ggtcggattc gttcgtctcc
    15661 ttcgtcaacc aaaccattgt gccgcagggc gcggatatgg tgttcgacta tatcgacgca
    15721 ttccgcgatc aggcaaaccg gctgaccgcc atcggcagcg tgatgctggt cgtaacctcg
    15781 ctgatgctga ttcggacgat agacaatgcg ttcaaccgca tctggcgggt taacacgcaa
    15841 cgcccctgga tgatgcagtt cctcgtttat tgggcgttgc tgactttcgg gcctttgtct
    15901 ttgggtgtgg gcatttcctt tatggtcggg tcggttcaag actccgtact ctcctccgga
    15961 gcgcaacaat gggcggacgc gttgaagacg gcggcaaggc tggctttcat gacgcttttg
    16021 ctgtgggggc tgtaccgctt cgtgcccaac cgcttcgtgc ccgcccggca ggcgtttgtc
    16081 ggagccttga ttacggcatt ctgcctggag acggcacgtt tcctgttcac ctggtatatg
    16141 ggcaatttcg acggctaccg ctcgatttac ggcgcatttg ccgccatgcc gtttttcctg
    16201 ctgtggttaa acctgctgtg gacgctggtc ttgggcgggg cggtgctgac ttcgtcgctg
    16261 tcttattggc agggcgaggc cttccgcagg ggattcgact cgcgcggacg gtttgacgac
    16321 gtgttgaaaa tcctgctgct tctggatgcg gcgcaaaaag aaggccgaac cctgtccgtt
    16381 caggagttca gacggcatat caatatgggt tacgatgaat tgggcgagct tttggaaaag
    16441 ctggcgcggt acggctatat ctattccggc agacagggct gggttttgaa aacgggggcg
    16501 gattcgattg agttgagcga actcttcaag ctcttcgtgt accgcccgtt gcctgtggaa
    16561 agggatcatg tgaaccaagc tgtcgatgcg gtaatgacgc cgtgtttgca gactttgaac
    16621 atgacgctgg cggagtttga cgctcaggcg aaaaaacagc agcagtcttg agtatttttg
    16681 aaactgtatt tttatcctaa agacattttc ctatctgctg attccaccgt ttcctttctg
    16741 tgtgccgcca taatttttat aatagacaag ccattcaagt ttgcattgac tgctttttca
    16801 ttggcaatat ccaaatgact ggccgcttca tctaaaaata ggattttcgg ttcgcaatat
    16861 aaggcccgcg ccaatacgat acgttgtttt tgtccgcctg acagtgcgct gcccatatcg
    16921 ccgatcaagg tttcatagcc cataggcatg gcggagattt cttcgcgaat catagcaagg
    16981 caggcgcaat gttcgatttt tcctctatcc ggttctgtat cgaaaaaaca gatattctct
    17041 gcaattgggc cagcaaatat agtggattaa atttaaatca ggacaaggcg gcgaagccgc
    17101 agacagtaca gatagtacgg caaggcgagg caacgccgta ccggtttaaa tttaatccac
    17161 tataaaacat cgtcctgcct gaccatcgca ctcaaattgc ggataaaacg tggcggtaag
    17221 ctgtaaatgt cgtgcccatt tatcatgact ttgcctgatt cgggaggtag attgccgctt
    17281 aaaatatcca aaaatgtcga tttaccgcag cccgatcgtc cgattaacgc aagcgattca
    17341 ccacgtccga tcttgaagct gacgttttgt aaaaaagcaa acacttccat tgctgctgcc
    17401 aaagccaaaa gctgaaacaa tgtccgcccc agcccagaaa tcccgcgcaa catgggtagg
    17461 atgcggattt cctgcttttc ttcccctgcc tcgaaacgcg tgtttggcca cagttccaaa
    17521 gcaattcccg taaacttgcg cgatatttcc tccgtcttga ctttgcgtcg tcccgaagcc
    17581 ggatccatga cggcagcccc gtccgaagat accgattcca gcaccacaaa atgattcaaa
    17641 tcccaatgta gaatacaggg caggcgcaaa ctgcccaatt cgtctaaatc cagcctcaac
    17701 gcccgtcccg tcagccccat atcatcagca aaacgaacaa tatctgccaa attcgcaccc
    17761 ttaagtgaca gacagtattt tgaacgcagt gcgcgcaaat ccgtatagaa accataaaat
    17821 ccggccacag ccgctagaca tgccaagcca cactccgcta cttctgtttg cagtataacg
    17881 ggcagctttt ttgtcaagcc caaagacagg ttttgcagat aatccataga tttccttgtt
    17941 gaatcagaaa agagagatgg gaagacggga atggtttgga aaggccgtct gaaaaggttt
    18001 cagacggcct gcagccccat attggctttc aatgcgaccg gttttcctca cgtttcaaat
    18061 acagcagata cgcaagaaaa gacaaagccc ctacaggtcc tgcgacggta accgaaaaaa
    18121 acctgccttt gtaaaacaca ccgtcgaagt ttaaaaaata gcaaaggatg tcggtcagga
    18181 tgctgatggc aagataaatc agcacagcgg ctttccagtg tttcaggtaa tgtgcgaaat
    18241 ccatttcaaa ctcccgatca acagttgcac gggtcacaat ggcagtcttc tccgcattgg
    18301 cagttgcgcc tgtcgatcat ttttccccat tttgcaccgg caaaaccgcc gatatgccca
    18361 cccaatgcag aaccgccctc agctcctacc catccgccgc ctgcgccgcc gatggcaatt
    18421 ccggcaggat ttccgcctgt taccaatgcg ccgcccgcca ttcccgtgaa tgctccggca
    18481 aacgacccta aagcgccgcc gaccttgctt ccgacccatt ctccggagac tctgcccctg
    18541 tgcccccaag taccttctgt gccgccgaaa acagcggtca tttcgttcat ggtcaattct
    18601 ctcatttcaa aactcctttt atcgtcaatc gaaaaattga aagggcagat accctatcct
    18661 tgcttttaca gacagagtat ctgtaaaagg gggtagtttc aggcagcttc agtgtttatg
    18721 tttttatgta gtgttttaca ggtcgtctga agaggtttca gacgactttt tatctttcag
    18781 cctcaagcct tacaacctgc ccgacatact ataaatcggc tccaataccc attcgtacag
    18841 ccgccgtttc tcgtgtagga tgtctgcttc cagcgtcatg ccgatttgca gcggtttttc
    18901 ctcaccgtat gcagtgatgg ttggtttgtc gggttttatt ttcacgagat aaacaggttc
    18961 gttgctcttc gccaaatcgg aggataccat gcccaatccc gacaattcct gtctgcccag
    19021 tgccgttttt gccactgata cgacactgcc ggaagcaagc ccgaatttct gatagggata
    19081 tgcctgataa cgtaggacaa ccttgtcttt cggcttgata aagcctgctg cactgctggg
    19141 gatatataga tgggcatata actcggtacg ttcgggaaca atgctcaaga gcagtttgga
    19201 aggatcaacc tgccgtccga cttcgacgtt cggtattgct atataacccg accgtcctgc
    19261 acggatgatt tgttcagagc gcatttcaaa atccaaaact tcttgagaaa tatcggcaat
    19321 ggtgcgttca agctggcttt gttctgtctc atgccgtttg gggaggctgg ccaatgtcag
    19381 attctgcgtg cggatttcct gaagcagccc ggcttcttct cggcggtagg catcaagttt
    19441 ggctttctgc tctaaaagct ctgcctcgac attcatcgtt tcttgttttg acactgcatc
    19501 attggcggat aggaaacgat atttccgcaa catttcttcc gcaagtctaa tgcgcctttt
    19561 ctggccgtct atctgttgca aaatatggag tttctggttt tccaaacgtt cgacagttgc
    19621 tttaaggctg cgcgtttcat tctcgtgtat cagcttcaga cgacccagtt cctgttctgc
    19681 caacgttttc ttcaaaaccg cttccgtttt caactgctgc tgcacgctac ctcctgcgcc
    19741 gaaacgtgag gtcgaaagcg caaatagctt gtcgccagcc ttgacctttt ctccatcttc
    19801 cacgaatttc gctgtaattg tccccgtatc cggtgcatac accctgatta cgcccgatgc
    19861 aggtaaaatt tgtccctcca ctgttgtctt tcgcgtatag ttaccgaata tcaaaaacag
    19921 gataatcagt aacgcagata tcgatgcaaa tgtcgtccat agggaaaatg acaacggtcg
    19981 tgtcagaatc actttacccg tcaggctggt ttgccgggca atggcgactt cagggcggaa
    20041 gaaaggttgc ttgggtctat tcataaaatt gaagttaaga aagtttcaga cgacccctag
    20101 agatcgtctg aacaatgaga aatatcagca gtaatctgta ccgtcagtgt agccgtttcc
    20161 tgatttatct gcttttgttg cgggagcagt taatccatgt tcaatctcaa agattggtct
    20221 tccgttataa ggaggtgcat taacggcatc atttacccaa tcacgagtca gattgtatac
    20281 accatttgca ccatatagca ccgaaaaaat ttttcggcag gaaatgaact gtcgctgcag
    20341 cagcaggtat tgcaacaaaa tccccccatg tgggacctcc tttggttgtg gcagcattag
    20401 ctacatttcc agctatattg tctgttacag gacctccccc tgaaaccagc ttcaattcat
    20461 gaagttgaag ttcaatcatt tttatactcc ttttcttggt tggtattcct aaaaattcgg
    20521 ctaacaaaaa catatggcag atatattgaa aaaaaattca aagtaccctg aataaaattc
    20581 aaattccaac tatatttgtt aatgtagtcg agaagaaaca tatctgataa agaatatagc
    20641 aattgataac aagctattac taatattacg aaaaatataa actgcttcca gtttttcata
    20701 gaatccctca caaaatttcc agaaaatcta actctatcaa ctgatagatc aacttcctaa
    20761 cttcttcatg ttttgcctga ttgaagttaa ccagtagatt tttcaacaat aacggttcat
    20821 tcttaccgat gtgttctaac acttttttcc ccaactcatc tacgcttatc ttcatcccat
    20881 tcccaatcaa atatcccttt tccaacgtat ccaaattatt ggcatttaat ctcaacctga
    20941 cgtcgtctga aagcggagta gcgttgggat tcgcgaactg ttcgagatga aaagcggtat
    21001 cggtacgttc tttgccgaga aagtcttcac tgaaggcttc ataattgacg gggtcggcaa
    21061 tcatggcggc aatttgtgcg gcagtatcgt tgatacgcgt cctatcttgc tcccagtctg
    21121 agaaactgtg gcgcagactt tctatggtgg gaaatttctt cattagccac tcgaggtaat
    21181 tatagccgtt tggtgggaag gtaccgacag cgaagtggaa ggtttcacag ccgagcggga
    21241 taggtctgtg ccaccaaccg cgtgggatgt agaggacatc acctgcttca aggataatat
    21301 ccatatcgat atgttcagga atggaaatat cagtatcttt agtctgttgc atatacaatg
    21361 gcatagggaa atcaggggca gtaagttgcc aacgtttctt gccgaaaagc tggacggcat
    21421 acatatctcg ggcgtcccaa tggtttttat aagattcgtc gctgccaaaa gcaagatatc
    21481 cactaacaat agtatgtgcg ccggcaaagc gggcgacttg acgggcgata tggtctgaaa
    21541 acggctcgtt gttaatatgg ttatagacta acgacgcacc attcttcata tgttcgtaga
    21601 taacggattt aataaaacgg tagcgagttt tgcccaaatc gtcgaaactt tcgacgtatt
    21661 cttctttagg aacgattgcg ccttttttac gcagatgaaa cagcggtgcg gttgggtctg
    21721 ctcgttggta tatctcgttg atatatttac aagatgcggc ttcgagattc cgaaccgctc
    21781 ctttaaagag cttgggcttt tgatacagat aagtctgtcg gaacgtttta ggactaatgc
    21841 cgaagtcgag atggatgccc attacttccc cttactcaga aaatatttaa aatttataat
    21901 gttacatata gttacaaata ttagagtttt ttgtgtgtgc atcaaggaat tgttgacaat
    21961 tttagttaaa aatttgtctc caaacggaaa aaagcggttt gttttttgtt gttaacattt
    22021 ttattgtaat taaataaaag gtcgtctgaa aacggttttc agacgacctt ttgctataat
    22081 cgggcttcat cgccccgttc ggtttggaac cttatgaaaa ccctcgtcct cctcctgctt
    22141 tccttctcca cgaccaccgc tttcgccgca tacggtttgg gtttggggca ggcaccgaaa
    22201 tatcctgccg gctttcgcgc ctacggttat gtttattccg gacggcaggg ctgggtttta
    22261 aaaacagagg cggatgccat taaattagac acgcttttca aacgctttgt gtaccgtcct
    22321 tccgccgcca atcaaaaccc cgtcggacaa gccgtcggac agcgttcgga cggcataccc
    22381 gccaaccaca caaaggaaaa accatgagca aaaaaatcaa agccggcatt gtcggcgcga
    22441 cgggctacac gggcgtggaa ctgctgcgcc tgcttgccgc ccatccagat gtcgaagtcg
    22501 ccgccgtaac cagccgcagc gaagcgggaa ccgcagttgc cgattacttt ccaagtctgc
    22561 gcggcgtgta cggcctcgcc ttccaaacgc ccgacgaggc aggtttggaa caatgcgaca
    22621 tcgtcttctt cgccacgccc aacggcatcg ccatgaaaga cgcgccacgc cttttggaac
    22681 agggcgtgcg cgtcatcgac ctttccgccg acttccgcat acgggacatt ccgacctggg
    22741 aacactggta cggcatgacc cacgccgccc ccggcctcgt ttcccaagcc gtgtacggat
    22801 tgagcgaact caaccgcgaa gccgtcgcac aggcgcgcct cgtcgccaac cccggctgct
    22861 acccgacctg cgtatccctg ccgctcgtgc cgctgttgcg gcaatgccgt ctgaagcccg
    22921 gtatgccgct gattgccgac tgcaaatccg gcgtgtccgg cgcgggcagg aaaggcaatg
    22981 tcggttcgct gttgtgcgaa gccggcgaca acttcaaagc ctacggcaca gccggacacc
    23041 gccacctgcc cgaaatcagg cagaccatcg ccgggcttca ggacggcatc gccgaaggat
    23101 tcgtgttcac gccgcacctc gcgccgatga tacgcggtat gcacgccacc gtttacctcc
    23161 acctttcaga cggcagcgac cccgaaaccg tcctgcgcga ctactaccgc gacagcccgt
    23221 tcatggacat cctgcccgcc ggttcgacac ccgaaacccg cagcgtgcgc ggcgcaaacc
    23281 tctgccgcat cagcatccgt caggcggcgc aatccgatgt gtgggtcgtc ctttccgtca
    23341 tcgacaacct cgtcaaaggc gcggcgggtc aggcagtcca aaatatgaac attatgttcg
    23401 gactggagga aacacacggc ttgggcggca tccccctgct cccctgaagc gcaaacggca
    23461 aaccgcaggc atcgtgcctg cggttttttg atgccgtctg aaagcggcgg tttttttggg
    23521 ttcggacggc ttttggctca tcattcagcg aaaacaaaaa tctaaaatac cgtcattccc
    23581 gcaaaagcgg gaatctagtt tatccggctt cagcaatttc cgacacattt ccacacgctt
    23641 cgattccgtc atttctccgg tttcaatcgt ttccgataac accgtggttt ttcatttcta
    23701 gattcccgcc tgcgcgggaa tgacggcggg gggcttgccg ttttcccgat aagcctctgc
    23761 ggattctcat tgccggattt ccgcccgctt gggaataacg ggatttaaaa tcatgaaaat
    23821 gtgtcaaaaa taatatagtg gattaacaaa aaccggtacg gcgttgcccc gccttagctc
    23881 aaagagaacg attctctaag gtgctgaagc accaagtgaa tcggttccgt actatttgta
    23941 ctgcctgcgg cttcgccgcc ttgtcctgat ttttgttaat ccactataaa aaatcagatt
    24001 tccgttacac ttttttctaa tatttcagac ggcattttgc tcacacaccc aaataacctt
    24061 ccctgccgga aagccacctt gccaaatgcg cttcgacgat ttcagggttt tgttcaatca
    24121 gcatcggggc ggtttcgcgc gcttgttcca aaaggtgtaa gtcttcttcg agcttggcga
    24181 agcgcagcat aggcacgccg ctttggcgcg cgccgagaaa ttcgccgggg ccgcggatat
    24241 tgaggtcttg gcgggcgatt tcgaagccgt cggtgtgttc gtagatgact ttcagccgcg
    24301 ctttggcgag ttcgcccaag ggttcggcaa acaggaggac gcacacgctt tcccccgcgc
    24361 cgcgccctac ccgtccgcgt aattggtgaa gctgcgccaa gcccatgcgc tcggcgtgtt
    24421 cgatcaccat cagggcggcg ttgggcacat ctacgccgac ttcgatgacg gtggtggcaa
    24481 ccaagacgtt cagacggcct gcggcaaatt ccgccatgac ttcggccttt tcggcggcct
    24541 tcatgcgccc gtgtaccagt ccgatattgg gttcgggcaa tgccgtctga agccgggcga
    24601 gggtttcggc ggcggtttgc agttgcaggg tttcgctttc ttcaatcaat gggcagaccc
    24661 aatatgcctg ccgccctttt cggcaagtgc cgaggacgaa gccttcgact tcggcgcggc
    24721 ggacgttgtt gacgaggcgc gttttaatcg gagtgcgccc gggcggcaat tcgtcgatga
    24781 cggatacgtc caagtcagcg aagaaactca tggcgagcgt gcgcgggatg ggtgtggcgg
    24841 acatcatcag ctgatggact tcgcgccctt tgtttttgag tgcgaggcgt tgtgcaacgc
    24901 cgaaacggtg ctgttcgtcc acaatgctca agcccaaatt gtgaaacgcc acgccgtctg
    24961 aaaacagggc gtgcgtgccg acggcgattt tgacgctgcc gtcggcgagt ttggctttgg
    25021 cttcgtcttt ggcttttttg cgcaaactgc caaaaaggca gacaacttca atgcccaaag
    25081 gttcgagcca ttgtttgaac ttgatgaagt gctgttcggc aaggatttca gtgggcgcca
    25141 ttacagccac ttgcgcgcct gattcgatgg cggtcagcgc ggataaggcg gcgacgatgg
    25201 ttttgccgct gccgacatcg ccttgcagca ggcggtgcat ggggtgggtt tgcgccatat
    25261 cgcggcagat ttcggaaaca actttttctt gtgcatcggt cagggcaaac ggcagggctt
    25321 ggcgcagggc ttgggtcaat gtgccgtcgc cgcgcaatgc cgccgccgtg ccgctgacgc
    25381 gcttctgccg cgccaaacgc atggacaact gttgcgccaa aagttcgtcg aatttgagcc
    25441 gctgccacgc cggcagcgtg ccgtctgaaa gttgatgaat agtgaaactc ggcggcggcg
    25501 aatgcaaaag gcgcaggctt tcggcaaggc gcggcagctt cagacggcct aataaagcat
    25561 caggcaaggt gtcgtgcagc ggcgtaacgt ccaacgccgt ctgaatgatg cggcgcaaag
    25621 tgggctggtt caaaccgttt acggtcgggt aaaccggcgt gaggctttcc gccaaaccgc
    25681 cgccctcggc atcgcggatt ttgggatgaa tcatctcgtc gccgtaaaat ccgtgtttga
    25741 tttcgcccac ggcgcggatg cgtttgccga ccgccgtctg cttctgatgg ctggcgtaaa
    25801 agtggatgaa gcgcagaaaa aggacgctgc cggaaccgtc ggcaatttgg acaatcagct
    25861 gcttgcgcgg tttgaacgtt acttcctgat ggataacctc gccctcgacc tgacacggca
    25921 cgccaatcgg cgcgtcctta atcggcataa tgtgcgtctc gtcctcgtaa cgcagcggca
    25981 ggtgcaacac caaatcccac gcggtatgga ggttgagttt gtcgagcttc ttggcggaaa
    26041 catcggtgat tttgagctgt ttctgggttt cgggcgacat cataggcaga ttcctttgga
    26101 cgcgcctatt ttatccgaaa acaaaaatgc cgtctgaaac ggattcagac ggcatcggca
    26161 ggcaggaatc aagccccggc ggcttcggct tcctgctgtt gttggtaaat cgcctcaaag
    26221 ttaatcggcg cgagcaggac gggcgggaag ccggcgcgcg ttaccgtacc ggaaaccgct
    26281 tcgcgcgcgt aagggaagag gatgttcgga cacgccacgc ccaacagcag ctgcacatct
    26341 tcttcgggga tgttttccag acggaaaata ccgctttggg ttacttcgtt caaaaacatc
    26401 gtgcgctcgt tatccaattt ggcggtaacg gttacggtaa cgtccacgtc gtagtagccg
    26461 tcttccagct tttgactgcc ggtggaaacg cgcatatcca cttcgggatc gccctgttcc
    26521 aaaaagattt gcggcgcgtg cggcacttcc aaagacaagt ctttgacata cagtcgctcg
    26581 atgctgaata cgggttgcag ttcttcgctc attttgtttt cctagtttgg gggttaaggg
    26641 ttcagcagtc cgtccagccc gccttcctgc tggaggcggt agaggtcggt aaatccgccg
    26701 acgtgcgttt cgccgatgaa aatctgcggc acgctgcgct gtcccgaaag ccgctgcatt
    26761 tcggcaaagg cttcggggct tgcatcgaca cggatttcgt cgatatgtcc gacacctgcc
    26821 gcgtgcagca gccttttcgc catcgcgcag taggggcaaa acggacctgt gtacatggta
    26881 acggtctgca tattgggttt ccgaaagttt tgcaatgata atcaatatag gggcaatcgc
    26941 tccgtttggc aagtgcggaa cagatgcacg ttcagacggc atgtgcggag tgtgtcaaag
    27001 tttctttttt aaagtatgat aggcattgtg aaaaatattt ttgcacccgc tctgcgcggc
    27061 ggggcggaac ggatgcaaaa atatttttat tacattttca ggaaaaacca tgttgtcagg
    27121 actccccatc cccaaagaca tcgcgcgccc gcccgaaacg atattggtca acatcacgcc
    27181 gcaggaaacg cgcgtggcgg tgttggagga aaacaatatc tgcgagctgc acatcgagcg
    27241 caacagcggg cacagcctgg tcggcaatat ctatctgggc gtggtgcgcc gcgtgctgcc
    27301 cgggatgcag agcgcgttta tcgacatcgg cttggaacgc gcggcatttt tacacatcgt
    27361 cgatgtcctc gaacaacgcc gcaaccccga agaaacccag cgcatcgaac atatgctgtt
    27421 tgaagggcag tcggttttgg tgcaggtcat caaagacccg atcaacacca aaggcgcgcg
    27481 gctttccacc caaatctcgc tggcggggcg tttcctcgtc caccttccgc aagaagacca
    27541 catcggcgtg tcccaacgca tcgaagacga tgccgaacgc agcagcctgc gcgaacgcct
    27601 cgacaaactc ctgccggaaa atgcctgccg gggctacatc atccgcacca acgccgaaaa
    27661 cgccaccgac gaacagctcc agtccgacat cgactacctg accaaagtgt gggaacacat
    27721 ccaagaacag gcgaaaatcc ggccgccgga aaccctgctt tatcaggatt tgcctttaag
    27781 cctgcgcgtg ttgcgcgata tggtcggctg cgacacgcag aaaatcctcg tcgattccac
    27841 cgtaaaccac gggcgcatga cgcgttttgc cgaacaatac gtccacggcg cattgggcag
    27901 gatagaattg ttcaaaggcg aacgcccgct gtttgaaacc cacaacatcg aacaggaaat
    27961 cagccgcgcc ctgcaaccgc gcgtcaacct caacttcggc agctacctga ttatcgagtc
    28021 caccgaagcc atgaccacca tcgatgtcaa caccggcggc ttcgtcggcg cgcgcaattt
    28081 cgacgaaacc atcttccgca ccaacctcga agcctgccac accatcgccc gcgaattaag
    28141 gctgcgcaac cttggcggca tcatcatcat cgacttcatc gatatggcgc aggaaagcca
    28201 ccgcgaagcc gtgttgcagg agcttgccaa agccctcgcc ttcgaccgta cccgcgttac
    28261 cctgcacggt tttaccagcc tggggctggt cgagctgacg cgcaaacgct cgcgcgaaaa
    28321 cttaaaccaa gtcctctgcg aaccctgccc ttcctgccaa ggcaggggcc gcctgaaaac
    28381 gccgcaaacc gtgtgctacg aaatccagcg cgaaatcgtc cgcgaagcgc gccgttacga
    28441 tgccgaaagt ttccgcatcc tcgccgcccc caacgtcatc gatttgtttt tggacgaaga
    28501 atcgcaatcc ttggcaatgc tgatagattt catcggcaaa ccgatttctt tggcggtcga
    28561 aaccgcttac acgcaggaac agtacgatat tgtgctgatg taaaaaatgc cgtctgaagc
    28621 cttcagacgg catctgtcta tttcagggtt tccttgtcca acagcgcgcg tatcaacagc
    28681 ccgtgtccga aacgtcggct gtcggtcagt tccaaatatc cgccgtattt tttggccagc
    28741 gtgtcggcaa tcgacagccc cagccccgcc ccctgctgct ccgttcccaa aatacggtaa
    28801 aacggatcga ggacgcgggc gcattcggat tcgggaatgc cgttcccgtt atcctccacc
    28861 cacacggcga gatatttccc ttcgtccgtg aaacccaaat ctatcctgcc cccgttcggc
    28921 gtgtaacgta ccgcgttgtc ggcaaaggtt ttaaccagcg tatagatttc cgtttcgtcg
    28981 gcagacactt cgacatcgcc tccgaccgcc acaccgatgt cctgacgttt ttccaaaacc
    29041 agcggcatca gttcctgcaa cacttggcgg aaacggcttt gcagaccgaa tgtcgttttc
    29101 gccaaggggg gtttcgtccg actgcgaacg cgccagtgcc aaaagctgtt cgagcaggtg
    29161 tttgttgcgc ctgatgctct gctgcaaaac ggcggactgc cgccccgcat cgggtgggag
    29221 cggcatattg ttgagccgtt ccgcctgaag ggaaagggca gtcatcggcg tacgcaattc
    29281 gtgtgccgcg tcggcgacaa accgctgacg gcggcgtata tcttcatcaa cacgtttcaa
    29341 aagcagattg atggcggtta cgaaccctct gatttcactg ggaatattgt acacactcaa
    29401 agcaggcagg ccgttgattc ggcgttgttc gagactttgc gacaatttgc ggacggggcg
    29461 catggctttg tgcgtaatcc acacagtcag cagtatcatc agcggcagtg ccgccaacag
    29521 gggcaacacg ctttgccgtg ccgcatcctc cgccaaatct tcacggtatt cgttttcctg
    29581 catgacggca atccgtccct gttcggtcgt gcggatatag gcgcggtaat aatcgtcgtc
    29641 cccgtccgcc cgaagcgtgt gcagaccgtc cgccagatgc gcgggcaggc tgacaacagg
    29701 gtcttcctgc tgcggcatct gtaccaaaat acgcgtatcg ccgtcgcctt cgggcaaagt
    29761 ttcggatttg gaatcagggc cgacatacaa tgccgcctga cggagcaggt cgtcctgcaa
    29821 cgcttccgtt tcgtggaagg tttcgtagta ggaaaacata cctgcaagca ttgccagcgg
    29881 aacaaacatc caaatcaggg caaggctgat tctgacctga agcgaatgtt ttaaaatttt
    29941 aaaaaaacgg tccggcatct tcgttcctgt tcagacggca tcttgacgcg gcatcagcca
    30001 gccgacaccg cgcacatttt gtatgctttc cttacccaat ttcttgcaca gcccgtgaat
    30061 cagaaaatcc accgcattgc tttcgacttc cccgccccaa ccgtaaacct tgtcctccga
    30121 atccgagcgc gacaaaatca cacccggcct cgccagcaaa gcctgcaata ccgaaaactc
    30181 ctggttgctc aatgccacct gcctcccctc ggcaataatt tctacctgat acgttgcagg
    30241 attgagggat aacgcaccat ttgacagaca cgcctgcgcc tgtccgctcc cgcgccgcaa
    30301 caccgcccgc atccgcgcct taaactccgc catatcgaac ggcttgacga tatagtcatc
    30361 cgcaccgccg tccaaaccgt tcagccggct gtacaaatca tcccgcgccg taacgatcag
    30421 cacggggacg gtacagcctg ccgcgcgtat ttccgacaaa acatccaaac cgtcccgccc
    30481 aggcaaaccc aaatccagca gcatcaagtc ataaggctgg gcagcggcag ccgccgcaac
    30541 ctgcgcgccg tttttgaccc aatccaccgc atagccgccg tctttcaaac ttgccgacac
    30601 cgcttacgca atcatcgcat cgtcttccac cagcaaaaca cgcatcaact ttcccttcaa
    30661 aataaaccgt gcctattcta acaccccaaa attagccgca atttagcggc ctttacgctt
    30721 gccggtattt ttcaaaactg cggcacaaaa aaaccgcgcc ggcaactgcc ttcagacggc
    30781 attggggcgc gattgcaaca cacggacagg caggcaaagc ctgcgacaga tcacaggaac
    30841 gattcgggct tcaggcggct tcgccgttta cggcagaggc acgattcctg ccgctatcga
    30901 actgaccaat atcgccagcg acaaacccca cgcccagaaa aacgaataac ggatgtgttt
    30961 gcccatcgac aatttcgcca aacccaaacc catccacaaa gccggcgaaa gcggcgtaac
    31021 aaaagtaccg acgatactgc cgatcaacat cgcatagcct gccgcttcgg gtgcaacgcc
    31081 cgcctgcgag gtaatctgtt ccacaatcgg aaacagtccg aaataataag cgtccgtact
    31141 caaaaccaac tcaagcggaa tacccaacac accgatggca atatgcagat aaggcagcag
    31201 cgcgtccggc aggatatgca caaggtcttt ggaaatcgcg tccaacatcc ccgcgccctt
    31261 caaaatcccc aaaaacgtac ctgccgccaa aataatggac gccatcatca ccgcgccgcc
    31321 ggcgtgggca taaatccgct ccatctgttc ctgcgggctg cggtaattca aaagcaacgc
    31381 cgccgttgca gccagcataa atacataacc cggcgggaag atgcccgaaa aaagcaggct
    31441 catcgccgcc aaaaacagca ggacattcca ccaaaacagt ttcggacgcg ccaatttttg
    31501 ttcttcttcc gacaaaggcg ccggctttat caaatccgcc acggcgggca acgcgcccaa
    31561 ctcccggaca atccgccttt tttcacgcac acccaaaaac agggacagca caaggataaa
    31621 caccacaccg ataatttgca ccgtcaacaa aggtttatac aattcgccca catctgcgcc
    31681 caacacgctt gcaacccgcc cgatcggccc gccccgcggc aaaaggttga ttagccccgc
    31741 gctggaagtc agcagcaaaa acagcaggta aggattcata tgcagacgct tgtaaagcgg
    31801 caaaagggcg gggacgaccg ataaaaacgt cgtcgcgccc gccccgtcca actgtgccac
    31861 caccgacacc aagaccgtcc ccacactcac tgccacgata ttaccccgag tcagcttaat
    31921 caaaccgcct atcatcggac ggaacagccc cacatcgttc atgattccaa aaaacaaaat
    31981 ggaaaacata aacataatca caatctgcgt caccgatttc gtgccgcccg aataaaattc
    32041 ttttaattgg gatacatcaa accccgccag caacgcccca atcagcggca ccaagattaa
    32101 tgcgatgatg ggcgacactt tttccgtcag caacagccat acgatgaccc cgataatcag
    32161 caatccgata aacgtcagca ttatttctcc tttattttat tttgaacata aaaccgcccg
    32221 tgcaggcaaa accgccaaca tatgcgggat aagccttgca ttccattcac gcctgccgac
    32281 atttctgcat ccgtccgtca tttcacggcg gcaaccgata cggaacaacc ggcaaaccgg
    32341 tatcgggacg gcgcgggggc atccgtcccg gtgcaccgat tcaaacgaaa ctgcccccta
    32401 tcattgcgga gcgcggggcg tgccgtacac gcgagatttt aaacacgccg atcatttgcc
    32461 gcgcattatc cggcaaacgg caaaccttga cgctgcccgg cccatataaa aaagccgcaa
    32521 aacccgaacc ggttttgcgg cttttcgatt tggtttgttt atttggcatt tctttcaatc
    32581 aaaccgacaa actgattgat atatgactga acaaaatccc ttgccgagtc aatcaactta
    32641 ccgttttcat caaacagcgt cggcgaattg cccaaaaata cttccggctg tccggttacg
    32701 ggcatatcaa aatacgacag ggcaaggcgc aggttttttt gggaactgta accgcccatc
    32761 ttgccgacgg aatggctgat gatgccggcc ggtttgtttt tccaagccac gtcggcattc
    32821 ggtttcgagc cgatgtccac cgcatttttc aaacaggcgg gaatggtgcg gttgttttcg
    32881 gacgtaacga acaaaatgcc gtccgaagcc ttaatcgttt cgcggaaagc cgtgtagctt
    32941 tcgggcagcg gcacatcttc caccgcaggg tcgtcataat cgaaattgta aagcggcaga
    33001 tgtccgattt cgacgatttc cgcctgccag ccttcgggga acatctccgc cgcattcaat
    33061 gccactttgc gcgcaaacga agcacggcgc aggctgccca ccaaaatact gattttctta
    33121 gccacaatca ttcctcctga atattaagtt tgtgcgtttc aatcatttca taatggtaac
    33181 gattattata tatgtgattt cccctgcaaa caagccggtc cgccgccccg gcgttcccac
    33241 ttatccggct ttgccttata attgcttttt ttatgtaaca gattcaccta tgaatttccc
    33301 caaaacagcg gcctccctgc tgctgcttct cgcctccctc gccgcacacg cgctcgatac
    33361 cggccgcatt ccgcaaaacg aaatcgctgt atatgtccaa gagcttgaca gcggaaaagt
    33421 catcattgac caccgtgccg gcatacccgt caatcccgcg tccacgatga agctcgttac
    33481 cgcgtttgcc gccttcaaaa ccttcggcag caattaccgc tgggcgaccg agtttaaaag
    33541 caacggtacg gtaaacgacg gcacgcttga cggaaacctg tattgggcgg gcagcggcga
    33601 ccccgttttc aatcaggaaa acctgcttgc cgtccaacgc cagttgcgcg acaaaggcat
    33661 ccgcaatatc acggggcgcc tgatgctcga ccacagcctg tggggcgaag tcggcagtcc
    33721 cgaccatttt gaagccgaca gcggttcgcc gtttatgacg cccccaaatc cgactatgct
    33781 gtctgccggt atggttatgg tgcgcgccga acgcaatgcc gccggcagta ccgacatcct
    33841 caccgatccg cctttgccgc atatttttgc ccaaaacaac ttgaaaatta ccgcctccca
    33901 agctgcctgc ccttcggtca aaaaactgat gcgcgcatct ttttcgggca atacgctgaa
    33961 attgcgcggc aatattcccg aaagctgttt gggcaagcct gtcggtgtcc ggatgttcgc
    34021 gcttgacgaa ctgatccgcc aaagttttac caaccgctgg ctgctcggcg gcggacggat
    34081 ttcagacggc atcggcatag ccgacacacc ggaaggcgcg cagacgcttg ccgttgcaca
    34141 ctccaaaccg atgaaggaaa ttttgacgga catgaacaag cgttcggaca atctgattgc
    34201 gcgttccgtc ttcctcaaac tcggcggcga cggcaaactg cccgccgttt ccgaacaggc
    34261 ggcgtctgcc gtccggcgag aacttgccgt atcgggcatc gatgttgcgg atttggtttt
    34321 ggaaaacggt tcgggtctgt ccagaaaaga aagggtaacg gcgagaatga tggcgcaaat
    34381 gttggaaacg gcttatttca gcccgtttgc acaagatttc atcgacacgc tgcccatcgc
    34441 cggcacagac gggactttac gcaaccgctt caaacaaagc ggcgggctgt tgcgcttaaa
    34501 aaccggcacg ctcaacaatg tccgcgccct tgcaggttat tggctgggcg acaaaccgat
    34561 ggcggtggtc gtcatcatca acagcggccg cgccgtttcc ctgctgcccg acttggacaa
    34621 cttcgttgcc aaaaacatca tctccggcgg cgacggctgg ctggatgcga aactgatgtg
    34681 caaagaacgc cgcgcctgaa tcgggaaaat ataaaaatgc cgtctgaact gttcggacgg
    34741 catttttgat tttcaaaccg gaattacagc cccgctgccg ctttcaatga ggccgctttg
    34801 tcggtgcgct cccaagtaaa ctcaggttct tcgcggccga aatgtccgta ggcggcagat
    34861 tttccgtaaa tcgggcgcaa gaggtcgagc atttggacga tgcctttggg acgcaggtcg
    34921 aaatgttcgc aaaccagcgc aatcagtttt tcctcgctga ttttacccgt accgaaagta
    34981 tcgatggaaa tcgaagtcgg ttcggcaacg ccgatggcgt aggaaacttg gatttggcat
    35041 tgggttgcca agcctgcggc gacgatgttt ttcgccacat aacggcaggc gtaagcggcg
    35101 gaacggtcca ctttggacgg gtctttgccg gagaatgcgc cgccgccgtg cggagccgcg
    35161 ccgccgtagg tatcgacaat gattttgcgg ccggtcaaac cgcagtcgcc ttgcgggccg
    35221 ccgatgacga agcggccggt cgggttgatc aggtattttg tttcgtcggt cagcagttcg
    35281 ggcggcaaaa cgggcttgat aatctgctca atcacggctt tactcagttc ttcatggctg
    35341 atggcaggat cgtgctgggt ggacaggacg acggtatcaa tgcgtttcac cttgccggtt
    35401 tcgctgtcgt aaaccacggt cagttgggct tttgcgtcag ggcgcagcca aggcaggcgg
    35461 ccgtctttgc gcaattcgct ttgacgctgc atcaggcggt ggctgtaata gatggcaaac
    35521 ggcatcaggg tcggggtttc gtcgcaggcg tagccgaaca tcaagccttg gtcgcccgcg
    35581 ccttggttca ggtcgatgcc ttcgccttcg ttcacgcctt gggcgatgtc gggggattgt
    35641 tggtcgtagt acacgccgac cgcgcagccg ttggcgtcaa agcccggctc ggaggagttg
    35701 tagccgatgc gtttgatggt ttcgcgtgcg actttgatgt agtccacttg ggcggtggtg
    35761 gtgatttcgc ccgccaatac gcacaagcct gtgttgacca aagtttccgc cgcgacacgc
    35821 gctttggggt cttgcgccaa gatggcatcc aaaatcgcat cggatacttg gtcggctact
    35881 ttgtccggat ggccttcgga aaccgattcg gaagtaaaca gatattcgct cattgaaatt
    35941 ttccttgaaa aacaaaccat cttcttcaga cagcatgttg tatgaacata atgtcgacag
    36001 cgggaaatat agcaaaattt ccctattcgt gccattcagt tgagaaatat tcctatttaa
    36061 acggcgcttt ggaatctctg tccgtacgtt tcgtacaggc aaaaaaattc ccgcatcaag
    36121 cgggtttgga ttgctccggc gagccacatc ggtttttcaa ccgtccacct tacctttccg
    36181 tttgaaaagc aggttggcat ggaattccca actcttaatg cagcgcgcat cgtagcagaa
    36241 aaggcatatt gccgcaatac ttcccttttt cagacggcat gtttcgttta caattcaggc
    36301 tgtttccccc tttgcgaacc gccatgcaca tcctgttgac cgccctgctc aaatgcctct
    36361 ccctgctgtc gctttcctgt ctgcacacgc tgggaaaccg gctcggacat ctggcgtttt
    36421 accttttaaa ggaagaccgc gcgcgcatcg tcgccaatat gcggcaggcg ggtttgaacc
    36481 ccgacacgca gacggtcaaa gccgtttttg cggaaacggc aaaatgcggt ttggaacttg
    36541 cccccgcgtt tttcaaaaaa ccggaagaca tcgaaacaat gttcaaagcg gtacacggct
    36601 gggaacacgt gcagcaggct ttggacaagg gcgaagggct gctgttcatc acgccgcaca
    36661 tcggcagcta cgatttgggc ggacgctaca tcagccagca gcttccgttc cacctgaccg
    36721 ccatgtacaa gccgccgaaa atcaaagcga tagacaaaat catgcaggcg ggcagggtgc
    36781 gcggcaaagg caaaaccgcg cccaccggca tacaaggggt caaacaaatc atcaaggccc
    36841 tgcgcgcggg cgaggcaacc atcatcctgc ccgaccacgt cccttctccg caggaaggcg
    36901 gcggcgtgtg ggcggatttt ttcggcaaac ctgcatacac catgacactg gcggcaaaat
    36961 tggcacacgt caaaggcgtg aaaaccctgt ttttctgctg cgaacgcctg cccgacggac
    37021 aaggcttcgt gttgcacatc cgccccgtcc aaggggaatt gaacggcaac aaagcccacg
    37081 atgccgccgt gttcaaccgc aataccgaat attggatacg ccgttttccg acgcagtatc
    37141 tgtttatgta caaccgctat aaaacgccgt aacgaaaata aaaatgccgt ctgaacaggt
    37201 ttcagacggc atcttgtcat ttgacgattt cggacaacga ccaacgcgga cggacgttga
    37261 acgcaccgac ctccctgccc ttgcccaggt gcatcgcacc ggcaaaggca atcatggcac
    37321 cgttgtccgt gcagtatgcc atcggcggga aaaacacgct gactttttcg gacggatgtt
    37381 tcggcttgcc tttgggggtc gggatttgta ccgtcatgtt gccgaaagtt tcacggagtt
    37441 tgcggtttgc accgaccccg ccggcgacca ctacggttct gaaccctgtc tgcaacaggg
    37501 cttttttcac ttttgcctcc aacacttcta ctaccgcatc ttgaaacgca cggcaaatat
    37561 tgttgcgggt ttgctcgggt atggtttccg aaccgtttgc ctcacgcact ttttcaacgg
    37621 cagtcaaaac agcggttttc aatcccgaaa aactcatctg caaatcgtcg gaatgaatca
    37681 tcgggcgcgg aaaaacaaac gcttcgggcc tgcccgattc cgcaagttcc gacagtttcg
    37741 caccgcccgg atacggcaaa cccagcagtt tcgccgtttt gtcgaatgcc tcgcccgccg
    37801 catcatcgac gctctcgccc aaaagctcgt agtcgcctat gcccctgacc gccataatct
    37861 gcgtatgccc gcccgaaacc aacagcgcga caaaaggaaa gtcgggtttt tcctccgcca
    37921 acagcggcga cagcagatgt ccttccaaat gatggacggg gatgacgggc ttatccaacg
    37981 ctaaagccag cgcgttggcg tagctcgaac ccgccagcag cgcaccgccc aaaccgggcc
    38041 cctgcgtaaa ggcaaccgcg tcaatatcgc catacgatgc gcctgcctgc gccaaacagc
    38101 cttcagtcaa cggaacaagg cggcggatat ggtcgcggct cgccaattcc ggcacgaccc
    38161 cgccgtattc cgcgtgcatt gccatttgag tgtgcaggca gtgcgaccgc aatcctcgtt
    38221 cggtgtcgta cagcgcaacg ccggtttcgt cgcaagaaga ttcgattcct aataccaaca
    38281 tggtctgatg ccgttaaaaa ctgaaaaacg tattctagcg aatttcggca cgactgccgt
    38341 atccccaaaa cggaacatgc cgtctgaagc ccttcagacg gcatcgtcgc accgtatcaa
    38401 agcgttccgt aagaatgcag cccgctcaaa aacatattca cgccgataaa ggcgaatgcg
    38461 gttacgaaca aaccgataat cgcccaccac gccagcactt tgccgcgcca gcccgccacc
    38521 agccgcaaat gcagccacac ggcgtaattc aaccaaacga tgaacgccca agtctctttc
    38581 ggatcccagc tccaatagcg tccccaagcg tccgccgccc acaacgcgcc caaaatggtg
    38641 gcaatggtaa agaacaaaaa gccgacggca atcgccttat acatcacctc gtcgatcaat
    38701 gccgacggcg gcagccacag ttttccgcct ttttcttccg cacgcaggga aaccagttcg
    38761 gcaataccga gcatcgcgga aatgcagaac gcgccgtaac cgataaagtt tgccggaacg
    38821 tggattttca tccaccagga ctggagcgcg ggaatcagcg gctggatggt atgcgcctca
    38881 cgcgacacgc tgtaccacaa cacaaagccg accacgaccg ccataaagcc gaacacgaag
    38941 ccgcccaatt tctgcacggc aaatttaccc tcgtaataca aatacatcag cgcggtaatg
    39001 accaaaaaca gaatgaacac ttcataaagg ttggacacgg ggatatgccc tgcatcggga
    39061 cggagcagat agctttcgtg ccaacgtacc agcagaccgg taaagcctgc tacggcagac
    39121 acccatgcaa acacggttcc catacccaac agcgtgttgg tcggcacatt ttttacgctt
    39181 gccaaaaccg cgcccgaaat ataggcgaac agggcgaaga agacaaaagc acactgccac
    39241 atgatcgccg attggctgct gaggaaatac cgcaacagga aaatctctgc cgatttaatg
    39301 ttgccgccat acagaccgac ggcggcatag gcaagcaata cgcttaaagg aacaaaccag
    39361 cgcatcggtt tgaaaaacca acccaaaaac acggcaatac cggcactcgc ccacaacatg
    39421 accgtttcgt aaatgtccat atgcataccg gaacgggtct gcacgaaaac cgtagccgca
    39481 aaaaccagca cggcaaatac ccaatcccaa agattcagat tgcggatcaa agatttctga
    39541 atcagcagct cgtgttccgg aagggtttta tagtgttcag tcatgattca agtccttgcc
    39601 gagccgttgc aggctctcga cgtgttttgg aaattccttc tgcaaatccc gttcgctgcg
    39661 ggccgaagac atagcaaaac ggattttgcc gtctgaaaac aatacccacg cccgtttttc
    39721 gcgcacataa aacataaata ccgtacccaa aaccaacaat accgagccga gatagaccaa
    39781 aagcgcaccc ggcgaacggg tcatctgcaa acctgaggaa cgcacctcgg aaaacccgtc
    39841 aagctggagc agcataggcg cgggatattc cgtcagcccc gtataggcat ccatactgtg
    39901 cagcaggaaa cggttccgcg cttcatcctg ccgccattcg ggcaagccgt accggcgtat
    39961 ggtttcatcc aaagcagcgt tcatcacgcc gtaaagcatt tcgtagaaat agccctgcat
    40021 cttatcctgc tgccctttcg ggatattgga cgtaataaat tcgtccaatc ccaaatagcc
    40081 tttttgcgca aagatattca gcgtgttttc cgcagccagc atgaattgtt cgcggatttc
    40141 ggcaggtgcg tctttggttg cgtcggcaac cagacgtttg cgcccttccc catctttcaa
    40201 aaactcacgc aatgccataa aggtgtccgc tttcaactgc ttgtccaagg ggatacgcag
    40261 ccagcggtat tgctgctgca agccgctgcg cgtgccggtc agccaaaaat aatctttgtc
    40321 ctgcaaaatc ggcagcatat agtttttata ttcgaccgcc tgccctgccg catcacggat
    40381 gcggtacacg atggaagggc cgatattggt gtatttttta ccttcctgag taacggcgcg
    40441 gacatcgttc agagtggatt tcaggctttt ttcccgttcc gcaccctcgc tcatgtcctc
    40501 cacattcata gaagtgaact gatcgaactc aagacgatat ttgtgtttgc cgatttccaa
    40561 cggaaactgg tgtatggagg ttgccttcaa cacgacaggt tcgcgcgaag catccctcaa
    40621 attccacgcc ttgaatgtca aatccgaacc gccgtcggca aaactcgcct gataaatcgt
    40681 gatgccgtgc aaggtcaaag gatggttcac gcggatggtg cgctcgagtt tctcaccggt
    40741 tgccttgtcc gttacttcaa tatcgctggc aaaatcgcgc ggcatacccg tattgtaaaa
    40801 atcgatatgg aattttttca gtttgacttc aaaaggcaag tcctgaacca acatcccgtt
    40861 gtcggcattc aggaaaacca catccgcact ttgcccctcg gaaatattga cgttgcccct
    40921 aaatgagaga ttggacgcac ccaaaatact ttcgggcttg aaatccttgg cataaaccgc
    40981 ctgattgtcc ggaacaatcc gaccggccag catacccagc ttcagcagca ggttactgtc
    41041 tatcaacccg cccaggcaaa tgacaatcaa agcaacatgg gcaaagatat agccccattt
    41101 gttcatcgtg ccttttttgg cggcaatcag aaccgacccg tcctcacggc tgacggtttt
    41161 tccctgaaaa ccccgcacct ccagataacg tttggcaact tcgggggcaa tttttacatc
    41221 caacagcgaa gaatggcgca tcgccgccag agatttttct ttaacctttt cccggaaaga
    41281 cttcatttcg cgccaaaacg gcggaacgtt acggattaaa cacaaactgg tagaaaccac
    41341 cagaaacatc atgataacga caaaccatgc cgaagcatag acatcgtaca aacccaaaaa
    41401 atcaaaaatc cgagtccaaa acggtccgaa tttgaccaaa taatccgtct gcggctggtt
    41461 ttgctgtaac accgtgccga taaccgatgc aatacccagc agactgagca aagcgaccgc
    41521 aaagcgcatg gagctgaaaa aagcgaacca cggacgggaa agaagtgtgg gggatatacg
    41581 ggatttactc attgtgtgtt tattccgcca tcaggaatat gggaaagcag aattgggcag
    41641 acagaaaaca acgtcccgat tctactgtct tgatgctttt tatttcaaga caatgaagac
    41701 agcctgcatc gattccaacg gttgcgattg aaaaaactta tcgcaaaatt ttcagaagcc
    41761 gtctgaaaac cttttcagac ggcttctgaa gcagaccctt ggatgattaa cgcaaaccct
    41821 ggataaagtt agcaactgct tttaaatctt cttcggacat acggtttgca atatcttcca
    41881 tgatggtatt tttacgctga ccggacttgt aggcattcat ctgttcaaca atatatgcct
    41941 ggtgctggcc gcccaaacgc ggataagcct gaatttcgct tccgcctccc ggcatacccg
    42001 caccgctcgg accgtggcag gacatacacg ccggcacttt tttatcgctc aaaccgccgc
    42061 gatagatttt cgcgcccaat tcgggatttt ccttaggatt ggcttcgccg gatttgggct
    42121 gctgtttggc atagaatgcg gatacgttca aaatatcctg atcgctcaaa ttcattacca
    42181 ccggtttcat cacagctgcc gaaccgtggg tgcgtttgcc gtcgcggatg ccgatagttt
    42241 gatgatagat gtaagcagta tgctgtgccg ccaaacgcgg atacatcgca atgccgctgt
    42301 taccgtctgc tgcatggcaa gccgcacaaa ccgttgcggc aacctgtttg cctttttcca
    42361 cgtctgcttt gggagatgcg gaaaccgcac cggcagccaa aacaaaggcc aataaagtca
    42421 atcgtctcat ggagtgctcc tgattacagc attggataac gcaacaatgc tcttttttat
    42481 attcaaatat gggatttttg acccgattaa aaccgatgat tctgtaaacg tgttattcta
    42541 tactaaattt acattaaatt accactgtgt ttcacataaa accaaccgca tatttttgct
    42601 gtcggacaaa cggcggcgga aaacaaggat atgcccatga acctttttca aaacgccaaa
    42661 ttcttcacga cggtaaacca tctcaaagac ctgccggaca caccgctcga aattgccttt
    42721 gtcggcagga gcaatgccgg aaaatccagt gccatcaata ccctgaccaa ccatgtccgt
    42781 cttgcctacg tttcaaaaac accgggacgg acacagcata tcaacttctt cgagctgcag
    42841 aacggcaatt ttatggtcga tttgcccggc tacggttatg cccaagtccc cgaagcggta
    42901 cgcgcacatt gggtcaatct gctcggcgac tacctccgcc atcggaaaca gcttatcggg
    42961 ctggttttga ttatggatgc ccgccatcct ttaaaagaac tcgacatccg tatgctggac
    43021 tttttccaca cgaccggcag accggttcac atcctgctgt caaaagccga caaattatcc
    43081 aaaaacgaac agataaaaac cctgtcccaa gtcaaaaaac tgctcaaacc ttattccgac
    43141 aggcaaaaca tcagcgtaca gctgttttcc agcctgaaaa aacaaggtat tgacgaggcc
    43201 aaccgaactg tcggaagctg gtttgacgca gcagatgccg ccgcttcctc tccagaggaa
    43261 aactgacctc aattatacgg aaaccgtatc cccccacttg accggccgca aacatttaaa
    43321 aaattgccac tgccaaatct aaaatgccgt ctgaaagact tttcagacgg cattttgcgg
    43381 agtctttaaa acagggaatc caactgctgc tgtttggaat ccgtattgct cggaagcacc
    43441 ggcgtttcct gtacgtcctg acgcgtttcg tcagaccttc cctgctgttc gttttctact
    43501 gccgcttcat catcttcttt tgcccgtcgg gaaggttgcg gcgcaatacc gctgttgtcc
    43561 agcatcaagc ccggatcggt taccatacgt tccttcatat agtattcgcc attgctgctg
    43621 accacacctt caggcatttt catccctttg ccctgctttc ctttcaacgc aaaacgcata
    43681 tagtccaccc aaaccggcac cgcaatcgta ccgccgtagc cggcacgccc catactctta
    43741 ggtttgtcga agccgatata tacggcagta accacatcag ggttaaaacc gacaaaccac
    43801 gcatctttat tgtcgttggt cgtacccgtt ttaccggcaa tatccgttct tcccaacgca
    43861 gctgcccccc ttgccgtacc gacacggacc acatcctgca taatcttata cataatatag
    43921 gcattgcgcg gatcgattgc ctgaggcgca ttttgccctg ccaccaaagg ttgcatttgg
    43981 gcgcgcaacc tgccgtctct gtcataaatc ttatcgatca cgtgcgaaga aaccctatat
    44041 ccgccgttcg caaatacact atatgcctcc gccactttca acggcgtcgt ctcgcccgta
    44101 cctaaagcca tagacaggct tgccggcagc tcggacggcc tgaagccgaa acgccggata
    44161 tactgttgcg cgtaaccgac accgatagac atcaaaatac ggatggaaac catattcttg
    44221 gaagccgtca gagcctgtct caaagtaatg tagccggaat atctgccgtc tgaattttta
    44281 ggtgtccaaa ccgaaccgtt cggccctttc cccggcaggg aaatcggcgc atcgttaacc
    44341 actgtggacg cggtcatccc cttagataat gccgccgaat agacaaacgg cttaaaggtc
    44401 gaacccggct gccgcattgc ctgaacggca cgattgaatg ttttgctgtg aaaatcataa
    44461 ccgccgacca gcgcgcgcac agctccggtt tttgcatcca gcgaaaccaa agccccctgc
    44521 agcaacggct cttgaaccac cgcccaacgc ccgccgttgt ttttgacacg gatgaccgcg
    44581 cccctgcgga tacggtcctc ccccattttc tcattatcga ccgctcgggc cgcaaaaccc
    44641 aaggcgcgcc tgtcaagcgc aacccgcctg ccgccgggca gctgtatgac gacatttttc
    44701 tttttagtaa catccaacac aacggcggga accattttat cgacggtata gagtcccgac
    44761 agatactggc tgacagtctc ctcgacatct tcactcttac tcaaatcgat atagttttcc
    44821 gcaccgcggt agctgctgcc gcgatcgaaa ttccgtagag ccttgcgcaa tgcctcggtt
    44881 gccgccttct gatgatcggt gcggaccgtg gtataaacct taaaaccctg cgtataggca
    44941 tcttcaccat atttctcata cagttcccga cgcaccattt ccgccacata taaagcactc
    45001 tgatcgattt tccgaacaaa ccgctcataa tgcagttcct cattcaatgc ctgatcgcgc
    45061 tgttgcacgg taatcatctt ctcctcgagc atattgttca aaatatactt ctggcgcaac
    45121 ttggcacgct ccggattaac aatcggatta taggcagacg gagccttggg cagtcccgca
    45181 agcatggcgg cttccgccaa agtcaaatct cggacattct tattgaaata gatttgcgcg
    45241 gcagatgcaa aaccataggc gcgctgaccg aggtaaatct gattgaaata caactcaagg
    45301 attttgtctt tgcttaaaga ctgctcgatt ttataggcaa gcaacacctc attgaatttg
    45361 cgtgtgaacg ttttttcact gctcaaataa aaatttttcg ccacctgctg tgtaatcgta
    45421 ctcgcacccg actgcacgct gccggacacg acattgccga cggcagcgcg ggcaacaccc
    45481 caaacatcca ccccccaatg ccggtaaaag cgtttatcct cggcggcaat aaccgcattc
    45541 cgcaacacct cggggaaatc gccgattttt gtaaattcgc gccgctgctc cccatacata
    45601 ccgatgactt ctccatccgc cgaataaata gtcaacggca ttttaggctg gtaatgctgc
    45661 aaagaatcca aagacggcag tttcggatac gttaccaaaa tagcaatggc aaccagaccc
    45721 actccaaata cacaaaaacc aaaaaacaaa ccaaaacaag tagttaaaat ctttttaatc
    45781 atagct
//
LOCUS       DAXGCP010000004        43457 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.004, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000004 DAXGCP010000000
VERSION     DAXGCP010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 43457)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43457)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43457
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.004"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            46..477
                     /locus_tag="ACFJCW_000167"
     CDS             46..477
                     /locus_tag="ACFJCW_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC4150417.1"
                     /translation="MSVQLFVRGNLGAEFNLRPVASPKNDEASIVLNFSVASPNFKRN
                     AEGKSEVVSTEWISCEYWNRDAAHLHKILQVGMPVFVTGEERYESYTNRDGIEVRVRK
                     LRVQDVFIVPTERVEAIKLRPKREQSQDNNHVEDADDDIPL"
     gene            669..2708
                     /locus_tag="ACFJCW_000168"
     CDS             669..2708
                     /locus_tag="ACFJCW_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HFC4150418.1"
                     /translation="MRLFLCEKPSQAKDIGKVLGVLGGRHDGYFQNGDTIVTWAFGHI
                     LTQAAPDAYGEQYADFGNISALPILPEVWQMQVPPKVSKQFKVIKSLLAKADEVVIAT
                     DADREGEVIAREILDYCGYRKKISRFWTSGLDTQSVKKALSSIMPGKDKENLYQAGLA
                     RGRADWLVGMNLSRAYTAAYSAGYGREHILSIGRIQTPTLKLVVQRDKEIDTFVPYNY
                     YTLSVDFETADKSVFTTLWQVPENWRNTDGYCTNLEAVKALVKQLEKSTGKVITSNKE
                     RKSTPPPLPYSLSALQKEAGKKLGLSASKVLKIAQTLYEKYKITSYPRTPCRYLPKSQ
                     MSEVKDVFAAIQTIDKSMLSVIEKADPERQSRVWNDNQVNKHSHHAIIPTKASNFDLS
                     VLDKNELTVYRMIRDRYIAQFYPDFEYDSTVVEVEACSHLFKASSQLPVISGWKVLLG
                     KDVFEGDQIDEGPALPHLKVNDEVDTLSFNPETKKTTPPPRFTEASLLDEMQTLKDFL
                     KNVEDEQIRKILKSTEGLGTEATRATIIDRLFEMGYMEKKRSKIYATEKGRNLIARIP
                     TMIADPITTAKWELALAGIEAGKLTLAEFMAYQQKVITELVGQAKKDAVGKARPPKQT
                     DSAGTKKQAVARNEDDVCPTCKEGRLRQRGFKENPDKRYWGCSRFPECKHFEWVK"
     gene            2723..3253
                     /locus_tag="ACFJCW_000169"
     CDS             2723..3253
                     /locus_tag="ACFJCW_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150419.1"
                     /translation="MKKLVKKLSDSIFGNTCIEYVLDENHNYKEQYNANKDLFIYING
                     IQVGSISPGELQELQYRVFYSSSLWWSIFKSILGFLLKPAIIALTALPLGVLFLLWLN
                     TDNPEAFHRVFMMLQDPAHFAKAISGLFRLFYCISFFGTFVKLVFNQDSIFNKELSKN
                     IQSNKTCSMDIVAVRD"
     gene            3327..3929
                     /locus_tag="ACFJCW_000170"
     CDS             3327..3929
                     /locus_tag="ACFJCW_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HFC4150420.1"
                     /translation="MIGVIGLEFQMDRRNFLKKFVGVGALYTTGAAGLLLPKDVVAAT
                     SMADFWSRDRTINCKRADTGEKHEIRFFQQQNGYDLDAYRNACWLMRDAKDGNAMVQI
                     DVGLLNLMYAMQEWARQSGRSNPVITINSAYRTPRRNATIEGAARNSLHMRGKAVDFT
                     MRGVGIGELEQMAKYYNVGGIGIYNSFVHLDTGRVRHWRG"
     gene            4193..4642
                     /locus_tag="ACFJCW_000171"
     CDS             4193..4642
                     /locus_tag="ACFJCW_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3577 domain-containing protein"
                     /protein_id="HFC4150421.1"
                     /translation="MTQSNQNYFNLTADGIGFLNRPREVQGKRKSSNYYACTIQASRG
                     DNGEKTRFDLRIVGGQAKELFARLLEEFPQLLSKNYRERPTVVVGFRAGDIQPLKFET
                     NNRETGEVLETLSIDGRLLKFKFIKVDGDMWYQSSSQDETQNNPDAS"
     gene            complement(4663..4986)
                     /locus_tag="ACFJCW_000172"
     CDS             complement(4663..4986)
                     /locus_tag="ACFJCW_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150422.1"
                     /translation="MTYGREGHSGKLPKGQPSNSCFKSNKNKKFGLLKNCIFLLMLTI
                     DMSIDKKTILLKAKSLRGLTLCFTIIQELLGKLNRRFDRGLIFQAMSWKTKNGEARKL
                     PTILK"
     gene            5827..6342
                     /locus_tag="ACFJCW_000173"
     CDS             5827..6342
                     /locus_tag="ACFJCW_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3275 family protein"
                     /protein_id="HFC4150423.1"
                     /translation="MSINLSGTLTVQVIQGRRGPFKTAKLATSIGTFDVKNPILKQFE
                     PGEYQGNFIIEQLKVKAYEWGGGATSYLDAALDWQHLAEFAQEFSSGSDSPQDDPSDP
                     FDPVPENGIRLPEYAETADQVGEMIAQNREHISLGEYILSDRDELNIARSMMKEAGYS
                     YRPQSQTWCLQ"
     gene            6352..6933
                     /locus_tag="ACFJCW_000174"
     CDS             6352..6933
                     /locus_tag="ACFJCW_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150424.1"
                     /translation="MLYLTSRNDLMADAFFIWNRQLMFASLHGRDADMLSFQAQLQVS
                     NERLGFRRPEEVLSCPRLTTAEHCLNLSKYMTKYQTLNYGSVTHMFLYSDILIQPNFD
                     SKTGWVMLDDVTADLDKAAWQLVRQLSDIPLLEHWQNAVLSVLEADKSIMRFTPRIDE
                     EYAVVGVQAVRVDIPEDFDVRLTAMLQSGRLHT"
     gene            7159..7533
                     /locus_tag="ACFJCW_000175"
     CDS             7159..7533
                     /locus_tag="ACFJCW_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150425.1"
                     /translation="MPTLSEKHEVLSGLNRQDAAAIVALIDLKTEDDMEKVLNKLDFM
                     TQNFDARLDAFEKSVDARISSFEKSVDARISSFEKSVDARFSSFENSVDARFSAIDTK
                     INAIYWFIGITTTVAVAAAKFL"
     gene            7772..8050
                     /locus_tag="ACFJCW_000176"
     CDS             7772..8050
                     /locus_tag="ACFJCW_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HFC4150426.1"
                     /translation="MTATYADCRFEARITSDTRALLKHAAELQGRSMSEFVISAAREA
                     AQKAVADAEILMLSERDQLQFAQALLNPSKPNGALSRALEKHDELFGR"
     gene            8052..8543
                     /locus_tag="ACFJCW_000177"
     CDS             8052..8543
                     /locus_tag="ACFJCW_000177"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC4150427.1"
                     /translation="MPLPDFRIRLLDAADDRNAFERPSEPLNRYLQKQVSQDVKRKVA
                     TCFVAVTSDGQILGYYTLAATGVALSNIPAGFRKKLPRYPTVPAVLMGRLAVDGKYGG
                     FGLGSLLLADALKRISKAEIAAYALIVEAKDEAAIGFYRHFGFTSFEDATKHLFFPLA
                     NLR"
     gene            8638..11121
                     /locus_tag="ACFJCW_000178"
     CDS             8638..11121
                     /locus_tag="ACFJCW_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140658 - ATP-dependent chromatin
                     remodeler activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SNF2-related protein"
                     /protein_id="HFC4150428.1"
                     /translation="MYNPVSKIDELLPDFAGLDQTVTEMQERQNQITTDFNFIIRQVA
                     ETAQKSTEAAVLPEESPETELPDSDIPLTQFLAEFGDSLFNAVTEQNQPVYQGQTYPL
                     LEEVLDNLERPLFAAQREVVRAVLQQLVAEDKPAAIINAEMGTGKTMMSVAAAAAAHQ
                     AGLHRTLVLSPPHLVYKWRREILKTVPNARVWILNGADTLAKLLQIRALGRKPEVPEF
                     FVMGRVRMRMDYHWRPSYAVRRRRIPSEGASEGFAVSEYYCPKCGCEILDEENKPYNT
                     EGGVKNALAKNRRFCKGNHHGKPCKEPLWTLCRKEQSEDGVVSTVYDRVLKTMTTLPG
                     IGPKTAAKIIGMYGEQYLAEILENNIQAFSNLMDENGEFLFDDRQAARIDRDLGKAEF
                     SLGRGGYQPTEFVKRYLPKNFFGLLVVDEGHEYKNYGTAQGQAMGVLARCCNKILCLT
                     GTLMGGYAEDLFFLLWRLWPQMMIEDGFSYNKGNTLGSASMAFMRKHGVLKDIVRHLG
                     TEYNNGAFSSSKAERNSVRTAKAPGFSPLGIMRYVLPITVFLKLRDLGEGVLPGYKEV
                     FRPVEMTEDQQAVYKNMESVLRQHLKVALRNRDNTLTGVVMSALLSWPDCCYKPQDVY
                     WRRQNKILFHTEPQFDEEEISPKEADMLEVVKDSLAKGRKCLVYTVYTDTRDTTGRLK
                     EIFKRHGIKAAVMKATVKADQREDWVEDQLASGVQVVICNPELVKTGLDLLAFPTIYF
                     LQTGYNVYTLMQAARRSWRIGQKEDVEVYFAGYSDTAQQICLELMGQKVAVTQSTSGD
                     MPDSGLDILNQAEDSVEVQLAKRFVDRQD"
     gene            11175..11624
                     /locus_tag="ACFJCW_000179"
     CDS             11175..11624
                     /locus_tag="ACFJCW_000179"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150429.1"
                     /translation="MRSSEKARKVEFHRLADLICPRTAVTHCARPSGRTALFQLSLTL
                     WGYTVSPQGIGISLFHGDTDVKFFIFIKPDLPFHKESIESWIKLLEDIGKTALLAMLP
                     LFWLNSYSLTERASGVAVLALVAYFVQVYADKLRKYRDSLNRKDTSC"
     gene            12177..12401
                     /locus_tag="ACFJCW_000180"
     CDS             12177..12401
                     /locus_tag="ACFJCW_000180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150430.1"
                     /translation="MRYSKNKDYQFFIRQLVSGGEWMFLPKNGRKHSALKHLPTDRKI
                     PIPGSPGQDPRGLLNFKTMVRHIERGGTFD"
     gene            12472..13593
                     /locus_tag="ACFJCW_000181"
     CDS             12472..13593
                     /locus_tag="ACFJCW_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6094 domain-containing protein"
                     /protein_id="HFC4150431.1"
                     /translation="METQNHLMHPRVAHNHRDNGYFPTDQATLSRIAACLDIPASAGG
                     LLRIFDPCCGTGEALASLASTLQSEKISCQTYGIELEKDRAQEAMSRLTSVIKSDVEN
                     CTMQGSAVGLLFLNPPYGFAAKDNLSNQRTKRLEELFFARTFGTLQPGGVLVMIVPEA
                     ALTEHLTGEIATHCTDVRMIRAAADTYKQLVIFGIRPKNKASISKKQADAQQRLLLDF
                     ENAPETLPAGMPAYCVPIAPNKVFRPRSFKLEQGILERELGQQQSRTLWPSFSQHFGT
                     SAVIAEKRRPLCALGQWHAALALAAGQVNGVVTSTNGRKLLVKGSTHKTKVETKSEEY
                     GKKDRLVVTITSTDRFSPSIRAIDLTEGSSDFGRVLTIK"
     gene            13670..14011
                     /locus_tag="ACFJCW_000182"
     CDS             13670..14011
                     /locus_tag="ACFJCW_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150432.1"
                     /translation="MEQLDSAAPAACDTPSLFDLGRVSMTATVDYRAKEHLPAQLYEN
                     SLYAQILLEAHRHGIWGDIPPEDAKPNQLALKPGEEGRIMSSYKIGDQKIWVVTEWDR
                     SLTTLLFPEDY"
     gene            14247..14828
                     /locus_tag="ACFJCW_000183"
     CDS             14247..14828
                     /locus_tag="ACFJCW_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150433.1"
                     /translation="MQNFIVWMNPDREESAAAAAKLNGAVLTAHTDGVMAAIRRELKR
                     FGLGADLAVFAQTCEEFAKQANADMVCISSSNGDAVAAVTYLEDGYAGEGVSAVADMR
                     YLMPAYRQYFNRPDKMVIFQGALQYLSDEDIAWIFRRHINAIIEWQSNEGLGLYEFGF
                     SLSDVLTDGCRHVLREVVTGWLNREILPELYNV"
     gene            14863..15435
                     /locus_tag="ACFJCW_000184"
     CDS             14863..15435
                     /locus_tag="ACFJCW_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150434.1"
                     /translation="MPITCGLLAAGAETLLEIVMSIKVDNILLIEGTKESVAEAAKLI
                     LFRSPVHPEHWAFDFNRILPLPENITSDLAKQRIEAWGSSFSPYPTETFVTQREGFIE
                     ICFLTGLAPPFGIYRKLAEIFANLDVCFTAKYINQYGSFGGRYEYRNSVLYHCLCEMA
                     DIRKFGIAEFDIWYEGLSDRLESDGYLVED"
     gene            15898..16785
                     /locus_tag="ACFJCW_000185"
     CDS             15898..16785
                     /locus_tag="ACFJCW_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150435.1"
                     /translation="MCAGFRWRLFYQPGRKPINLRVSLSAGMGIPAQETTMPNWCGNS
                     LHFQGNPQRIAEVAEQILIKTDKGYQFSFQHIVPMPEELILPEVPDSYMQQTWFQIAQ
                     QPEKKLINLEREMLEQRDKSFWSVQYRLPDELFSELKLYFSEKFDWDNLTVGEVFLHF
                     EANSEVASRFRYDGPFAKRIAENIRQYGHPNWYDWRLANWGCKWDVNPDCTFVTVGES
                     GIRISCDTAWGPPEGIYRELAKRFPDVEFEAKYLEEGMWFAGTYEGHEGALFDYPCTD
                     DGVRDFATEHFGCEYDDED"
     gene            16874..17338
                     /locus_tag="ACFJCW_000186"
     CDS             16874..17338
                     /locus_tag="ACFJCW_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150436.1"
                     /translation="MIENQIDKEITQASCEGRFILKQENGKRFLYLNLPEGSDELNTI
                     WQTDEYDFTVPDLEVSIDVESLHTAVRLLNENQGILHGISTKCSAYSFGFEGKLRYER
                     LDVKPFPIKSFSYYLEFYNDWTGTLYELDLSAFLDEFFGECDPESKLDACLK"
     gene            17742..18053
                     /locus_tag="ACFJCW_000187"
     CDS             17742..18053
                     /locus_tag="ACFJCW_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0097351 - toxin sequestering activity
                     [Evidence IEA];
                     GO_process: GO:0001558 - regulation of cell growth
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PrlF family
                     antitoxin"
                     /protein_id="HFC4150437.1"
                     /translation="MKIIFDAVSTMTSKNQTTIPESVRKALGLEKQDKIRFSVLGGGQ
                     VLLEKNNTEEEEFEHDPVVGKFLHFLENSMTKNPNSIKPTSQSRFNRLRQLTWETDMK
                     D"
     gene            18055..18504
                     /locus_tag="ACFJCW_000188"
     CDS             18055..18504
                     /locus_tag="ACFJCW_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system YhaV family
                     toxin"
                     /protein_id="HFC4150438.1"
                     /translation="MPDSPMQINGYTIYEHECFTRQLDRLATTIESQKRSEKSSRSEE
                     AKLLERILGEIENIALNPDSPEYRLGKTLGPEYKFWRRAKFMGRYRLFFRYDSNSKII
                     ILAWVNDSGTKRTYGGKNDAYTVFKKMLGNGNPPSDWTALLEVVSKE"
     gene            18600..19694
                     /locus_tag="ACFJCW_000189"
     CDS             18600..19694
                     /locus_tag="ACFJCW_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150439.1"
                     /translation="MLPMSVYEPDKSKKGGGEKIALWRQTGYIGFYCCLILMMLFFPK
                     DFNRLKIIAYTSPDGDEWVTALEAKLKHREGMIYYSRHRPGTRKKMVLTRRKATNFFR
                     YYSEADSGGASAPESLTHLLCKQVLNELSNLPGGLTTVLNCTEHAEQQPPVTIRLNRA
                     LSEYRIDIDGKTFYIDVLLEFDQPGNTSLLRHEIRWQRKLAVEIWHTSRLASNAPKCL
                     ALSKIGIPVVQIRADKGSFLYIDEDELLNYDNEEIKNRINRHVEKLRNTFRKQILCTL
                     LRNPLSADFQTALMLHNQIKADEQQAEQIQEKFEALRNKHVLLEAEYSALAAQYAALL
                     EHQNFQAHSGKREIPKKHGILQRMASWFKS"
     gene            19747..20361
                     /locus_tag="ACFJCW_000190"
     CDS             19747..20361
                     /locus_tag="ACFJCW_000190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150440.1"
                     /translation="MKKIMFGLLAAMAISNAQAEGNFLNLASKPAKIDGVLEASLDKP
                     YPKFVQDWMKDSKLAGLGRIIQGKIFESTGTIERKFYARSESEHEKTVEDAVGTFKAY
                     CEHHQGTVETLTSDIFCINGRQVQWMGWWYRENYTNFAFSDGYTGEQAYRSKVTDVQP
                     GKKISTSYGPALVLEKGENGLIKIQPNRGNERWITSDSIQVTYK"
     gene            20428..20733
                     /locus_tag="ACFJCW_000191"
     CDS             20428..20733
                     /locus_tag="ACFJCW_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150441.1"
                     /translation="MKTKSKKLLRLVILFVAAFSISTPAVMYFSTGEATLNLFVEGFW
                     IIGLLQALAFTTIVDYCTESKHTNMLNNPACNDEDWDNDMLNNPAYSWSMFNIHHSD"
     gene            20937..21515
                     /locus_tag="ACFJCW_000192"
     CDS             20937..21515
                     /locus_tag="ACFJCW_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HFC4150442.1"
                     /translation="MIGFVKWYSYEKDFGFIFGEDGHEYFFRKSAGSDIPGQIVNFEP
                     FEHSRGLRARKVGNIHNPDPQQIQKLKTLCKDFQKVEKQPMSKKYNLLSAAILSLCLT
                     MFITLGFFYILAGFFDTDRETNIVLLFVFPAVTFSVLTFFLNKLFRNMKPGSDADVVT
                     NNDWLNDFWEDRRRHCPSYSHHPSNIWHLSED"
     gene            21631..21954
                     /locus_tag="ACFJCW_000193"
     CDS             21631..21954
                     /locus_tag="ACFJCW_000193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150443.1"
                     /translation="MKTKSKKLLRLVILFVAAFSISTPAVMYFSTGEVTLNLFVEGFW
                     IIGLLQAAVFTFVVDCSSSDLGSLSQWQIGNDWDRQMDPFYAHEIGNIWHGTHLDSSS
                     EEYWK"
     gene            complement(22011..22169)
                     /locus_tag="ACFJCW_000194"
     CDS             complement(22011..22169)
                     /locus_tag="ACFJCW_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150444.1"
                     /translation="MSIAQIVVQIEEVDEGNYQVRMSYSGGNDLVSEEGKSAFEQIIT
                     SIGKVLET"
     gene            complement(22173..22754)
                     /locus_tag="ACFJCW_000195"
     CDS             complement(22173..22754)
                     /locus_tag="ACFJCW_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 104 protein"
                     /protein_id="HFC4150445.1"
                     /translation="MRNATSYGGNGVMWRGISSGRQVRGNYVLKASTAHNQAELERYV
                     HNPQVRAFLDFIAASEGVKHGYQTAIGNYRITDFSRHPGNSVRRSFTRTDGSRSTSDA
                     SGRYQFMGYTWKGLAKQYGFTDFSPATQDKAAVALILAKKGAMEAILNGDYEKAVMKL
                     GGIWASFPTAPNEYRQHKRSWGFVHNFFRQRGF"
     gene            complement(22760..25858)
                     /locus_tag="ACFJCW_000196"
     CDS             complement(22760..25858)
                     /locus_tag="ACFJCW_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraG N-terminal
                     domain-containing protein"
                     /protein_id="HFC4150446.1"
                     /translation="MMAVEYFTFPGNGEAVRAVFNGVATISGSTMMGGAMQAAALFGF
                     LVTLAVAVFKLDLKDNFSYLFVVLFCWMGMMVPKTTVLITESGGYGYTGRQYTVGNVP
                     VGLAYMGYFVSSFGQSITRKAEQVNHLPDDLNYSRTGMLFGTRLMENIREARIPDAQL
                     TQDWALFMHQCSFFDMNLYHFYNVQDLAQSADILATLTHTNQALFTNVSQIASRRGNM
                     LQYNGKSKTMTCNEAAKELKDRTRFYSKNYLPGYIADRVFAGLGTNSAGINRVNALAT
                     LGNSSFQYLLDNARFDTLKNIEQAAMVEVIRQAGIINGQRNRNPAAVQQAFAQVQARN
                     QYIAAQKTSSSMASWNLPLIRSAAEAILIGLFPFVMILAMLGGIMAFRLLSFYMMSML
                     WIQLWAPVASIINMIMTMNAKRLFSVEAANGVITPGTGDTLLMAAADAQAAAGAAMWL
                     IPVIAGALAMGGRSLMNGMMGMTSSAKSTGEAAGSQVGSGNYSAGNMNYNNSNANKHS
                     LNPVYTDPQMMTAQSAAGTSWRNMATGDSRAQMRNSSLGVSSQSQISQSESYSKAADR
                     AETSAQQWQASFRESVSQGNANRLAFATNYGMDRSASEGYGMGLDAAESRKLSYVLDR
                     GKKIGQQFNISNASSIASAIAIGLGAGGSEPASEQKSASTRLAQTMIQKGAQGLESLS
                     KSAGTIGEMARNMQSFIGDKGKLGWKGDATNRDQMVAEIGKSIEAGIRQGVSFDSNFT
                     DKVSQSEAYKVGLNSGNSLVRTAEANFSKAREAAHMSAESYQEAQSYREMAARTYGNG
                     ITIAQDNTNALVQDNPELTMSELNAGQGGTYNAAIRAGVNSQDRLKAAAENSGWRPND
                     LSPEDRPQNNTQAAYKHFSDKVSSGAGAAFGDVQTQAHQAGIIPDGINAAINARGENL
                     KQEYANKSGKVEGDINQGRNSHRQEVGRLATHAQKAQDETNGVTMRINTHALPWNSFG
                     ERYNNLMEDVRKGKGYIGSGSDQAAAHLGNPALASEFDPPIPQRPGNTKSSGSAVFRP
                     KE"
     gene            complement(25865..27376)
                     /locus_tag="ACFJCW_000197"
     CDS             complement(25865..27376)
                     /locus_tag="ACFJCW_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraH"
                     /protein_id="HFC4150447.1"
                     /translation="MKFHIFRFPKPAKVPAVCASSAKYLCLTASLALPINSSAGIEKN
                     MADMFNSMGAEANYTEAGAFHGQSGSLYTGGGMSVRFPVSDISLGNIQLPSISAGCGG
                     IDFFAGSFSFVNKEQFIQFTRNLGNNAAGVAFDLALKALDPMIQDAIGGIRDLVNYVN
                     QNSLNSCKLSQDIVGGAMGKLGSLASSNCRAASVDSGSSNDPAEGTWYCQAAKNLVHE
                     ADKVRNTGKPQDTISFTGGNLTYEAMKNYTGQRSKLGIDMDFYYSMLGTIVFTPLTQH
                     EGDKDKYTVGIQSFEPKILSIQDLLNGKNNAGGEIREKVVLDMWTCKDGSKKLMENCT
                     EKNDVEIPSLRYMVHKRIETLPTAIRNNQGWNLSTRKQIAAIVNNSKLPILKMAVSDA
                     FLGTGYLKKTAVLDAIAVDIMANILDQSERQVRSTLGMYNKTDDASGEAVRKLFANLG
                     ELRSRIYQERIDSMKKIEIEESMMRAMEQFETQWRSAFVDTNNSMTFDSMNRF"
     gene            complement(27548..28324)
                     /locus_tag="ACFJCW_000198"
     CDS             complement(27548..28324)
                     /locus_tag="ACFJCW_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HFC4150448.1"
                     /translation="MAVMLIFSLHASNLRAADDGMGWYDQDIWKNENRAFLWYPDAKK
                     PKQAGQNRPQNTPVRNELAEFEMLQRNLDESRKIAVMNPTPQNLKRYIELQEVVMNKS
                     AAFADQWQRVIWQNPNLDYSQRGRPNNQLAQQQYDHNRQQQKAGAIRKLAGENGIMFV
                     FKSDCPYCHTMAPILKNFADQYGIKVMPVSLDGGGINHFPRALPNNGIAQRLNITTVP
                     AMYVMDTKTKQFTPIGFGVMAQTTLEDRFLAYSRPVGTLY"
     gene            complement(28336..28761)
                     /locus_tag="ACFJCW_000199"
     CDS             complement(28336..28761)
                     /locus_tag="ACFJCW_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150449.1"
                     /translation="MNINNWLAASAGIVSGMFFTGMALAASLPYTGGIALEKTEALAR
                     TSIPLPDGKPDALLALAMRHGSAKGYFSGRAAAAVKQKFRQDIPIFVEAVRMEEIKNK
                     PGCNRVRLTFHTSPALSQTFPSEIMDIGACPNRKNGGKK"
     gene            complement(28748..30289)
                     /gene="traN"
                     /locus_tag="ACFJCW_000200"
     CDS             complement(28748..30289)
                     /gene="traN"
                     /locus_tag="ACFJCW_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraN"
                     /protein_id="HFC4150450.1"
                     /translation="MLITSASAAALRESAACTRTSSVCVDGPSTKNINGVDVTKDCWE
                     YKEEYQCLEKDSADYCAPLKDPSAKCEVQGQTCLEQSNEGECLRYTHKYSCDVDLRTL
                     HQGRLPTKVEEMEHTHLISSQWDESSCQVQGKKCKAIATECLEPGSTKTINGVPVTRD
                     CWKERRTVQCTDGSDSETCSAYTSSDQCRLIGDKCTHQLPDGTCQAREKQFECTEKGE
                     TTKEVSGCQDRDFAKTMTTMEFARETQRFYDPEKQRFFNGEAGQCSIKLDGALDSVFG
                     GDCCRTKADPGKFVDFAVQTGTTMATTYFMASVASHYTFTTMFVSSAAQAMGTALSAA
                     GGITGTSQIGALGFSAAGQQGMGVIVGFNPAVFAAAIAVIAIQQWLKCPQSEILVAMK
                     RKADLCHYVGSYCGSKILGACVTMIESQCCFISKLAKIVNVGGKEQLKRGWGTPENPK
                     CEGFTAQELEQLDFSKLDLSGFYEEIYANMDNVAKQGQKVSQKIREASVNGKNLEVKN
                     YYEYQ"
     gene            complement(30328..31572)
                     /locus_tag="ACFJCW_000201"
     CDS             complement(30328..31572)
                     /locus_tag="ACFJCW_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150451.1"
                     /translation="MKRHAIYLTVFGLMQTAFAADYGSYVGELGKLGAGTATNMMQPA
                     QYTPRYTDNVPMAEQYYGGGVSLPTQFGDAKFNDCKNLPANPDLYLRQECEGVNLIAG
                     SRTKRPDVTISSNEKLVKGTQKIAGDPAETLEKYKWKYPVNEDGSVGTVPSSACPTET
                     ITVPAVKTVKRCNEYHGAEMFLCEAALKVNVDPGWNYSCLESKYRNQQYQCGKKLKVV
                     CEKSGPNCTRSGIEAGSLQGDMTVRLTASGSAHRLMFGTIGDNYWRDGQYDREMTLNV
                     KNPEKLTLFTLSRVEYDDWLIVKVNGKIVYSSYNNQMFAADYTAKDEDGFPIGRRFAP
                     VRNEEGTRLGNAERGKSWRKNLNIDIRPYLHQGKNTIWTRTVVGGGGENAIFFNVHQY
                     CEPVCHDKWENSCSEYEKRVKQ"
     gene            complement(31569..32051)
                     /gene="trbC"
                     /locus_tag="ACFJCW_000202"
     CDS             complement(31569..32051)
                     /gene="trbC"
                     /locus_tag="ACFJCW_000202"
                     /inference="COORDINATES: protein motif:HMM:TIGR02742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     assembly protein TrbC"
                     /protein_id="HFC4150452.1"
                     /translation="MSIAQKYRTASQEARQAAEKADLMVFVSFSMPEASLKRIARETA
                     KAGGVMVIRGFKDDSLKATVKAAEELAALQGDMLIHPELFDHYGITEVPVTVIARNSE
                     DGLDGCAVNSELGMCTEHVAVKGDVSLHSALEHLIRESEDKKLSDIANAKLAVLEGRK
                     "
     gene            32136..32309
                     /locus_tag="ACFJCW_000203"
     CDS             32136..32309
                     /locus_tag="ACFJCW_000203"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150453.1"
                     /translation="MLPIVTHIWVFNSGNFTHGCTQTVSRRLYIRIGVSTAYSGQTAQ
                     KNEEDASGYDYIA"
     gene            complement(32336..33454)
                     /locus_tag="ACFJCW_000204"
     CDS             complement(32336..33454)
                     /locus_tag="ACFJCW_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraU family protein"
                     /protein_id="HFC4150454.1"
                     /translation="MKIFVTPLKLLIPLLLLPLFSISHAAEAVPTAPIPNKLTCQGKM
                     LNPINDICWSCMFPIKIGGKINLNMDNQEDNGSSPNNWFCSCTHPSRSGVTVSFWEPT
                     HLVEVVRTPFCMVSLGGISLKNQKADTAETTGKADVSNKIQNLFGGSHKRGRNEQHDQ
                     HNAFYQVHWYKNPVVFWLEALLDNDCMEKGTLDIGWMTELDPTWKYPSLAVYQAPDSA
                     LFANVVAQAACAADCVKAAAGFPFNKLYWCAGCHGTIYPLSGWMSGHFSEVQAAKLMA
                     ARIQTKMHRDLVAWRTSGRDALCGYKLNPVMDKQNYKMAMTYPVAARKFRGRCCEPIG
                     RSTLVRDSGKAFPYKGNQFAFQLFRKRDCCGAYKFKTN"
     gene            complement(33451..34107)
                     /locus_tag="ACFJCW_000205"
     CDS             complement(33451..34107)
                     /locus_tag="ACFJCW_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraW"
                     /protein_id="HFC4150455.1"
                     /translation="MSHKKKIASVASLVILATGISSWVAASTPSVEKVGDKIGTTYPI
                     AEKHAIREIEARLKAKQDSGQLAAMQKEVQDRINRSALNLQPLEGLAKATKGSVRYFD
                     PSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPFKMFFFDGREPDQIELAKKLAAEYG
                     ESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQLNEVPSLVSQEGGRLRVEVMKP
                     "
     gene            complement(34116..34661)
                     /locus_tag="ACFJCW_000206"
     CDS             complement(34116..34661)
                     /locus_tag="ACFJCW_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S26 family signal peptidase"
                     /protein_id="HFC4150456.1"
                     /translation="MFEAMIKISQKESNKAVMKRLYREFCQKYATPFLAVAVCLSAFN
                     QHYALAFNLSRSLPHHLYFIKKDANKLSDLKQGDYVAFAWQGGFYPIGTQVVKEVAGL
                     PGNHVTKANRTFFIDGKEVGTAKEYSLDGMKLAINPFEGEIPQRFMWVKTGHKDSLDS
                     RYELSGLIHSGQIIGKAVPIF"
     gene            complement(34661..35209)
                     /locus_tag="ACFJCW_000207"
     CDS             complement(34661..35209)
                     /locus_tag="ACFJCW_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150457.1"
                     /translation="MTEAKEKKENTANTDPEKNPEDNGVEVSLGSLVIGAISIAALAL
                     GVWNFMKTHEKPVHIVDLAGISMTYREQAKNQGLQNGISDRQRAAILQNYQAKMNTLQ
                     QVIEEKVIRCGCNIFVKSALVGRNTEVVDVTADIMKELDKRVPATAVVAAPVHQQVEK
                     TIPKPMAEEGKGTPVTEEEMDR"
     gene            complement(35237..37813)
                     /gene="traC"
                     /locus_tag="ACFJCW_000208"
     CDS             complement(35237..37813)
                     /gene="traC"
                     /locus_tag="ACFJCW_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion system protein TraC"
                     /protein_id="HFC4150458.1"
                     /translation="MGVLSKFKNWLAGSDDVDQPMEALHNNPVDPDFDHLSDYLNYGA
                     YDTKTELFTLMSVKGDKPLGMGFILELNPFLGGSDDLIGKWGSLYALLPEKTPIQVQI
                     FGSPDLRNYFKEYEQVQASRPIDDPMRSTFETLAKKRTEFWNKGTQKVLVENTAIRLR
                     NLRCILSVNLNIPPDNAVEVSKAVSLLARMRDSLRSMQIYGRTWNADDLLAWTTLLLN
                     PNRMFTGQQDEIDPVWDETKFLSEQMIETRTSIKVLDSGSGLRFGNRAAGDCVIAQCY
                     SANRYPEEFHLSNMGALIGDVIEANMNYTSPFLISMAMFKRDYDTSSNTVKLKAARAK
                     QTAESKMAAVMPEAAKIKRDYDICLEAFGKGGGGLVSLLHQVVIWERPENINLAESQA
                     VSIWQAQGFGLYRDQYLQLGSYLTALPMAIDKEVEKYLDSKKRWSTKTMTNAVCMSPV
                     IGEWHGLGRPVIGLFGKRGQAMGIDLFANPAGNYNFAIIGASGSGKSFFANEIVRNYM
                     GLGTQVWIIDVGRSYEKFCQMIGGQYIEFTYEAGLCFPPFQMVTDINEDIEMLKLIFS
                     LMASPSDSLTEQQEAKLQRIIEEVWYEFGQEGTVDHVRERCLKCLITGSNEGGKPGER
                     DLSMVAVADQLYTYCSEGIYGSYFNGKLNVEFKNDLVVLELEELKTKPDLQQIIMQLI
                     MYRIMQGMYLSRSQYKIMMIDEAWALLGDTGTAARFIEEGYRRVRKYKGACGTLTQGA
                     NDYYKTKAAEAALENADFVFQLRTGAKSLKTIQDKEPFEVNDGIMQILRTLSKTDYYS
                     EIFVSTPIGYGVGRLYSDPFNVLASSSKAEDVEAVNHYRNQGLNTAEAIEAVLRDRAA
                     TR"
     gene            complement(37823..38401)
                     /locus_tag="ACFJCW_000209"
     CDS             complement(37823..38401)
                     /locus_tag="ACFJCW_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraV family lipoprotein"
                     /protein_id="HFC4150459.1"
                     /translation="MRLKALSITAAILILSGCSTLTMSGIGGSEKFRCPNARNSDDPY
                     CESISSNYKASVAGVLKDGMKRQVGQPYTDQSVRTLMLTQAYSSGTPVRSQSEIARIW
                     VAPYLDTDGDLNDQSFTYVVLNQGDWLIAHNGQQIINEYRPIRLLGDGAKTSGSSVET
                     SPTNSNNTNDRIPDVGVNLHLQETSGIPGTVR"
     gene            complement(38401..39120)
                     /locus_tag="ACFJCW_000210"
     CDS             complement(38401..39120)
                     /locus_tag="ACFJCW_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFC4150460.1"
                     /translation="MKKKILATIAAITAFQTAFADVKTVGSTLHKLYPNTTFSSVKAT
                     PMASIYEVTMGDNIAYVQENGRYFIFGALYDMQEQKDLTEMARSAVTQKSYSRLPFKN
                     AIKIVKGNGGKGKREFALFSDPDCPFCRRLEETLAGMTDYTAYVFMFPIKSLHPDAIS
                     KAEHIWCSKDREKAWNNYMLMDKEPAAGNCKNPVSENIALAEQLKVRGTPSMIHKDGR
                     RTSGAMPRAELEKWLNGAGAE"
     gene            complement(39130..40443)
                     /locus_tag="ACFJCW_000211"
     CDS             complement(39130..40443)
                     /locus_tag="ACFJCW_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HFC4150461.1"
                     /translation="MRVKVNKFKLSAARKRQLAIAGMVAGSMAAIVGSAIYVIEGNKK
                     KSAEVTQVQNKRQILRTDFTSPQAGITDNSLWMNTESSKIEYANRKISELETMVQELK
                     EKENSSNPDTSKGLGPDGLGKPPAISGIGDNGRLPPAPPAGTLPNGAPPADRSIERKI
                     VSGSMSEAELQPGTTGSVNTGNPNENVRVSPQLKEAEWVKSKTPRMNIEVVEDGGKVV
                     VSQGKFRARDSYIPSGTFFRSVLLGGVDAPTGGEAQNASPHPVLMRVTDFAQLPNRFK
                     YNFRECFVTGQAYGDISSERAYIRLQNLSCVGTDGRAIDMPVKGYVAGEDGKTGVRGN
                     LVTKQGQLLANALMSGVISGMGKGVSEAFKVTNNTAFGSTTSIRGSDQYRAGIASGIG
                     GAADRLAEYYIKLADKVFPVVEVNAGRQVDVVLTQGIEIDTGETK"
     gene            complement(40445..41179)
                     /locus_tag="ACFJCW_000212"
     CDS             complement(40445..41179)
                     /locus_tag="ACFJCW_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system secretin
                     TraK"
                     /protein_id="HFC4150462.1"
                     /translation="MCSLLKKIVFSALLAAGPATSFAAQRVPATENTPHVVSISKRNL
                     SRIAIEGGRISSWKFMEGDLELQKDTTTGQLFVRSLTSNPTNLFVISEEGKTYLLVLK
                     PTSKQGDNIVIDVAGANRREAAVLASQTGPMPVTMNSTEYVRAIKKMMASMMRGTTGD
                     MGINHSHEYQTVPLWKDTLFIQNGSYTAADMQGLSFTLTNLGTKQLEIREQEFYRQGV
                     LAVAVRKQILQPGEITDVFIISRPGG"
     gene            complement(41181..41846)
                     /locus_tag="ACFJCW_000213"
     CDS             complement(41181..41846)
                     /locus_tag="ACFJCW_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraE"
                     /protein_id="HFC4150463.1"
                     /translation="MKTEDMLSELAIRTGIKVFFWILLGMSIAVNLFLSATLLFKGTI
                     VQTTLTPPEIWRSMTVSNIAFSKEYLEEMAPYAAYLLLNVTPKTVDYQNSQLLKIVSP
                     DYKDALERELSLNALWVKKNNVGTTFSATEATADISDNTVSIRGVFEVKRNNALVEQK
                     DRELLISFKNNYGTLQLLSIKEVQKRVTKAEPAGQEKSEVETEDVEISKTATEFKGGN
                     RGN"
     gene            complement(41843..42124)
                     /gene="traL"
                     /locus_tag="ACFJCW_000214"
     CDS             complement(41843..42124)
                     /gene="traL"
                     /locus_tag="ACFJCW_000214"
                     /inference="COORDINATES: protein motif:HMM:TIGR02762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system protein
                     TraL"
                     /protein_id="HFC4150464.1"
                     /translation="MRDYHVPVSIDDPKKAFIWDLDVFILFMSGFGIGIVSRHFFISM
                     SISLFIAWRWGKLKSGKHQWFFLHVLYWYLPINEKNKRIPETNKREFLN"
     gene            complement(42146..42442)
                     /gene="traA"
                     /locus_tag="ACFJCW_000215"
     CDS             complement(42146..42442)
                     /gene="traA"
                     /locus_tag="ACFJCW_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraA family conjugative transfer protein"
                     /protein_id="HFC4150465.1"
                     /translation="MNIKRNKLVKSASAVALALYANLAMAATTGAEFKGLADMVTGWS
                     EGYLGMALGLTAFLIGLAVGLMKQTIMPCIVGLGVGLAATLGPGIIKGMFTLII"
     gene            complement(42498..43019)
                     /locus_tag="ACFJCW_000216"
     CDS             complement(42498..43019)
                     /locus_tag="ACFJCW_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HFC4150466.1"
                     /translation="METIKNTLFVASAMILTACAAPKQEVAGLPQDATYTVEQNQLGE
                     FVFCRNEECSGFERKVLAEQPVYAQTQTNLQKDEIRVFFNLGSSHLGAEGVRTLKRVL
                     PKLKNTQTVYLRGWADSIGGRNTAINRRLAKQRAAVIGKWLRKHNVSAKIRTASSPAC
                     CNSDDTRTVVITW"
     gene            complement(42989..>43457)
                     /locus_tag="ACFJCW_000217"
     CDS             complement(42989..>43457)
                     /locus_tag="ACFJCW_000217"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFC4150467.1"
                     /translation="KDMRLRAILLQFVVPGVLVLTSARAVAFCYKEAGSKYGIDPAML
                     QSIALTESAFRPNIESHTADIGLMGINRSWLPVLHKKFGLTGADVWNPCTNVHIGAWI
                     LANSYRQHGKSWEAVGAYNAACTKLKGRACYRARMTYANKVYQNWKRLKTRSS"
BASE COUNT        11415 a        10024 c         9666 g        12352 t
ORIGIN      
        1 ctgtcttttc tgtcatattt ttaaatcctt tttttggaga aaaatatgtc agttcaactt
       61 tttgttcgtg gcaatctcgg tgctgaattt aatctgcgtc ctgtagcaag ccctaaaaac
      121 gatgaagcct caatcgtact gaatttttca gttgcctcac ctaatttcaa acgcaatgcc
      181 gaaggtaaat cagaagtggt ttcaacggag tggatttctt gcgaatactg gaatcgtgat
      241 gctgcccatc tccataaaat attacaggtc ggtatgccgg ttttcgttac cggtgaagaa
      301 cgttacgagt cttataccaa tcgtgacggt attgaagttc gcgttcgtaa attgcgtgtt
      361 caagatgtat tcattgttcc aactgagcgt gtagaagcta tcaagttgcg tcctaaacgt
      421 gagcagtctc aggacaataa tcacgttgaa gacgctgatg atgacatccc attgtaaata
      481 tatggccacg aagaatactt ccttttttcg tgaaatgaac tgttggcttg ctgcattatg
      541 ggctgacttt aaggatatgt tcattgttac ccttatttat ggtggcttaa ttgctttggc
      601 aatttgggct tttttgacta tcgcatcttg gcttgttttg cagctgaagc aaagcttggg
      661 attttaaaat gcgtttgttt ttatgtgaaa aaccatctca agctaaggac atcggtaaag
      721 tgcttggtgt tcttggcggg aggcatgatg gttattttca gaatggagac actattgtta
      781 cctgggcatt tggtcatatc ctgacacagg ccgcgccaga tgcttatggc gaacaatatg
      841 ctgactttgg aaatatctcc gcattgccca ttctccctga agtttggcag atgcaggtac
      901 cgccgaaggt atcgaagcag tttaaagtca ttaaaagctt gttggccaaa gcagatgaag
      961 tagtgattgc tactgatgca gaccgtgaag gggaagttat tgcccgtgaa atattggact
     1021 actgtggcta ccgtaaaaag atttcccgat tttggacgag tggcctagat acccaatcgg
     1081 taaaaaaagc cttatcttca ataatgccgg gtaaggataa agaaaaccta tatcaggccg
     1141 gtttggcgcg cggccgcgcc gactggctgg taggtatgaa cctgagtcgt gcctacacag
     1201 ctgcttattc tgccggatat ggccgagaac atattttgtc gatcggacgg attcaaacac
     1261 cgactttaaa gcttgtagtc caaagggata aagagatcga tactttcgtg ccttacaact
     1321 actacaccct ttcagtagat tttgagacag cagacaagtc agtgtttact acactgtggc
     1381 aggttcctga aaactggcgt aatactgacg gatactgtac caaccttgag gctgtaaagg
     1441 cacttgtcaa acagcttgag aaatctacag gcaaggttat tacctcaaat aaagagcgta
     1501 aaagcacccc gcccccgtta ccgtacagcc tttcggcttt gcaaaaagaa gccggtaaaa
     1561 aacttggcct atcggcttcc aaagtgctca aaattgcaca aaccctctac gaaaaataca
     1621 agatcacgtc atatccccgc accccttgca gatacttgcc aaaatcgcag atgagtgaag
     1681 tgaaagatgt atttgccgcg atacagacta tcgataaatc catgctttca gtgattgaaa
     1741 aagctgatcc cgaacgtcaa tcaagggtat ggaacgataa ccaggtaaac aaacattccc
     1801 atcatgcgat tattccgacc aaggccagta attttgattt gtcagtcctg gataagaatg
     1861 aattaacggt gtaccgaatg atacgagacc gttatatcgc acagttttat ccagattttg
     1921 aatatgactc tactgtagtt gaggttgagg catgttcaca tttgtttaaa gcctccagcc
     1981 aattaccggt tatttccggt tggaaggttc ttttgggcaa ggacgtgttt gaaggcgatc
     2041 aaatcgatga aggtcctgct ctaccacatc tgaaagtcaa cgatgaggtc gacacgcttt
     2101 ccttcaatcc cgaaactaaa aagaccacgc cgccaccgcg ctttacagag gcttctctgc
     2161 tcgatgagat gcagactttg aaggactttt tgaagaatgt agaagacgaa cagatcagaa
     2221 aaattctcaa aagtacggaa ggcttgggaa cggaagccac tcgcgctacc attatcgatc
     2281 gtttgtttga aatgggttat atggaaaaga aacggagcaa aatctatgcg acagaaaaag
     2341 gccgtaatct gattgcccgt attcccacta tgattgccga tccgataacg acagccaaat
     2401 gggagctggc tttggctggg atagaagccg gcaaattaac tttagctgaa tttatggctt
     2461 atcagcagaa agtgatcaca gagctggttg ggcaggcgaa aaaggatgct gtaggaaaag
     2521 ctcgtccgcc aaaacagacg gattcagctg gtacaaaaaa acaggcggtc gctcgaaatg
     2581 aagacgatgt ctgtccgacc tgtaaggaag gccgtctgag acagagagga ttcaaggaaa
     2641 accctgataa gcggtattgg gggtgtagta ggtttcccga atgtaaacac ttcgaatggg
     2701 tcaaataaaa aaggactttg aaatgaagaa gctggtaaaa aaattatccg attcaatatt
     2761 cggaaatact tgtatagagt atgtgctaga tgaaaaccat aattacaagg agcaatacaa
     2821 cgctaataaa gatttattca tttacatcaa tggcattcaa gtagggagta tttcacctgg
     2881 cgaactgcaa gaattgcaat atagagtgtt ttattctagt agcctctggt ggagtatctt
     2941 taaatctata ctaggatttt tattgaaacc cgcaataatt gcgcttactg ccctgccgct
     3001 gggggtcttg tttttactgt ggttgaacac cgacaatcct gaagcgtttc atcgagtatt
     3061 catgatgtta caggatccgg cacattttgc aaaagcaata tccggacttt ttcgtctgtt
     3121 ttattgtata tcattctttg gcacttttgt taaattggtt tttaaccaag attcaatttt
     3181 taataaagaa ctttctaaga atatacagag taacaaaacg tgctcgatgg atattgtggc
     3241 tgtcagagat tgaggaagct caaagatgtt gccctctacc agcatactgg gaagtttgca
     3301 tatcaatact gagtgttgct taaaatttga ttggagtcat tggtttggaa tttcagatgg
     3361 atagaagaaa ttttttgaaa aagtttgtcg gcgttggcgc cctatatacg accggtgctg
     3421 ccggtttgtt attgcctaaa gatgtagtag cggcaaccag tatggctgat ttttggtcac
     3481 gagaccgtac aatcaattgc aaacgggcag atactggcga gaaacatgaa atccgttttt
     3541 ttcagcaaca aaatggatat gatcttgatg cttaccgcaa tgcctgttgg ctgatgcgtg
     3601 atgcgaaaga tggaaatgcc atggttcaaa ttgacgtagg gcttttaaac ctgatgtatg
     3661 caatgcagga gtgggcacgg caatcaggac ggtcaaaccc tgtgattacg atcaatagtg
     3721 catatagaac gccaagacga aatgcgacta ttgagggtgc tgctagaaac tcacttcata
     3781 tgcgtggtaa agcagttgac tttactatga ggggggtggg cattggcgag cttgagcaaa
     3841 tggctaaata ctacaatgtg ggcggtattg gtatctataa tagttttgtc catttggata
     3901 ccggcagggt tcggcattgg cgcggttaaa gattttacga aaaaatattg acatacgaaa
     3961 ttatcgggaa tatattgtaa ttgtttttgt agtttgtgac ttttcttaaa agtctcgtca
     4021 tttagccgtt catgaatgag attcgattcg tcgaatttac ggtacttctt tttcagccag
     4081 cctttaaggc ttctaagtca gttcggctac cgtgaaagcc gcaacttaac cctttgggga
     4141 tatactgtcc cctttgggat tgatatatcc cctgtttttt tggagatata tcatgactca
     4201 atctaatcaa aactacttta acctgactgc agatggtatc ggttttttaa accggccacg
     4261 tgaagttcaa ggaaagagaa aatcttccaa ctattatgct tgtacgatcc aagcctcccg
     4321 aggtgataat ggggagaaaa cccgtttcga tcttcgtatc gtcggaggtc aagcgaaaga
     4381 gctctttgct cgccttttgg aagaatttcc gcaattgctg tctaaaaatt accgtgaacg
     4441 cccgactgtc gtggtcggtt tccgtgccgg tgatattcaa cctttaaaat ttgaaactaa
     4501 caatcgtgag acgggcgaag ttttagaaac tttaagtatc gacggtcggt tgttgaaatt
     4561 caaatttatt aaagtggatg gcgatatgtg gtatcaatca tcctctcaag atgaaaccca
     4621 aaataatcct gatgcttctt agaaagctat tgaatatttt gattatttaa gaatggtagg
     4681 aagctttcgg gcttccccgt tcttagtttt ccagctcatt gcttggaaaa ttaagcctct
     4741 gtcgaaacgg cggtttaatt ttccaagcaa ctcctgaatt atagtgaagc aaagggtaag
     4801 tcccctcaaa gacttggctt tcagcaatat tgttttttta tcgatgctca tatctattgt
     4861 gagcatcagt aaaaaaatac agttctttaa caatccgaat tttttatttt tgttgctttt
     4921 gaagcaactg tttgaaggct gccctttggg cagcttacct gaatgcccct ccctaccata
     4981 ggtcattcag gtaagcttcc ccggttgaca gaccgtttct tctgtctgcg tatagccgta
     5041 taaccagtgc gcgcaattat tcgtaattgt tacggtttta ttactatcca gaccattatc
     5101 tgattacttc gtcggtgcgg actaggtaat cattagccag ggtaatcccc atttgaacct
     5161 gctttgcagg ttctctaaga cgttttgata tttgcagaac ggctcagaga atctgtattt
     5221 caagagtttt atacagctga cagactgttt tttctgtcat tgcatagccg ttgattgcaa
     5281 gcctgtttca ggtacggtac agctgctttt ttctgaagca gatttctttt aacccatctg
     5341 ggtacacttc cccgaatggg catggtgtac cctttatttt ggagtattac catgaatcta
     5401 aatctatctt ttcaccgttc aggtgccatc cttcccccaa atttactacc ggaaagaata
     5461 cgtatcggtg acatcctcac ccaccgacat actcatcgga aagttgtcgt ctcatgcata
     5521 caagaacatc atttgttact tgttgatgcg gatggccgta tttcgaaaat acgaacccaa
     5581 aaggcggtca atcggtattg taggagcgtc aacgatgttc atagccataa aaacgcttcc
     5641 gtagcgttga atatggctat tcgggcattg gataacgaca aacgtatttt tacaagattg
     5701 ggactgcgta tgtcccaaaa agtatatttg gataagattt acagtgctat taagcgctaa
     5761 tttgtttttt cccaaccacg ggatatctgc ccgcggccgg tatccctttt cttttggagt
     5821 gataccatgt ccatcaatct ttccggcacc ttgacggtgc aagtcataca gggtcgccga
     5881 ggccctttca aaacagctaa attagctaca tcaattggaa catttgatgt aaaaaaccca
     5941 atattgaaac agtttgagcc tggtgaatac caaggaaact tcattattga acagctcaaa
     6001 gttaaggctt atgagtgggg tggtggcgcc acctcttact tagatgcagc tcttgactgg
     6061 caacatctgg cggaatttgc gcaggaattt tcttccgggt cggattctcc gcaagatgat
     6121 ccatccgatc cgttcgatcc ggttcctgaa aacggcatcc ggttgcctga atacgcggaa
     6181 actgcggatc aggtcggcga aatgatcgcc caaaaccggg agcatatcag tttgggtgag
     6241 tatatccttt cagaccgtga cgagctgaac atagcccgtt caatgatgaa ggaggcaggg
     6301 tattcctatc ggccccagtc gcagacttgg tgtctgcaat aggaggttgg aatgctttac
     6361 ctgacttccc gcaatgattt gatggccgat gccttcttca tttggaaccg acagttgatg
     6421 tttgcttctc tgcacggccg cgatgcagac atgttgtcct tccaagctca actgcaagta
     6481 agtaatgaac ggcttggttt tagacggccg gaggaggttt taagctgtcc gcgcctgacg
     6541 actgccgagc attgcttgaa tctgagcaaa tacatgacga aatatcagac tcttaattat
     6601 ggttcggtca cgcacatgtt tttgtattcg gatattctga ttcaacctaa cttcgatagt
     6661 aaaacaggtt gggttatgtt ggatgatgtt accgcagact tggacaaggc agcttggcaa
     6721 ctggtgcggc aactctccga tataccgtta ttggaacatt ggcagaatgc tgttttatcg
     6781 gtacttgagg ctgataaatc catcatgcgg tttactcctc gtatagatga agagtacgca
     6841 gtagttggag ttcaagcggt acgagttgat atcccggaag attttgatgt gcgtttgacc
     6901 gctatgctac aaagcggccg cttacatact taatctgaag cccctagcgg gctttttcag
     6961 acggccttgc aaaggctctc tgaaaaagtc tgttacataa gagttttaca cagatgacgg
     7021 actgtatatt ccgttgatgg atattgctgc tgaggttatc cggccgtatt cgtatggttg
     7081 cggcattttt caattttacc aaccctgtgg ggatatacgt cccatgggga ggcatattcc
     7141 caaacttagg aggattttat gcctactcta tctgaaaagc atgaggtact gtccggcttg
     7201 aaccgtcagg atgcagctgc tatagtagcc ttaatcgatt tgaaaacgga ggacgacatg
     7261 gaaaaggttt tgaacaaact ggatttcatg acccagaact tcgatgcccg actggacgct
     7321 tttgaaaaaa gtgtagatgc ccgcatcagc tcatttgaaa aaagtgtaga tgcccgtatc
     7381 agctcatttg aaaaaagtgt agatgcacgg tttagctcat ttgaaaatag cgtagatgca
     7441 cggtttagcg caatcgatac taaaatcaat gcaatttatt ggtttatcgg tatcacgact
     7501 accgttgccg ttgctgccgc gaagttcctg taacattaaa cccgttccgt taaacggagc
     7561 tttttatctg taaccttgaa tcccaccatg ttccggcatc cggtgggatt tttatcactt
     7621 ctcactcaac cctatgggga tatacatacc tatggagatc gtatatctcc gttactttgg
     7681 agcatgtgat gttttctaca aaataccctt tcatatcttg ttttgtacgg taatcagccg
     7741 tacaatctag aaataattta ggagtatgtt catgactgcc acatatgccg attgccgttt
     7801 tgaagcaaga atcacttcag atacccgtgc tttacttaaa cacgctgcgg aacttcaagg
     7861 acgcagtatg tccgaatttg tcatcagtgc tgcccgcgag gctgcccaaa aagcagttgc
     7921 cgatgcggag attctgatgc tgtccgaacg tgaccaactt cagtttgccc aagccctgct
     7981 caatccgtcc aaaccgaatg gggcattgag cagagcattg gaaaaacatg acgaattgtt
     8041 cgggagataa aatgccgtta ccggacttcc gaatccgcct ccttgatgct gccgatgacc
     8101 gcaatgcatt tgagcgccct tccgaacctt taaaccgcta tctgcaaaaa caggtttcgc
     8161 aagacgtaaa acggaaagtc gctacttgtt ttgtcgcggt tacatccgac ggtcaaattc
     8221 ttggctacta tacattggct gcaacaggag ttgccctaag taatataccc gccggttttc
     8281 gtaagaagct gcccagatac cctacggttc ctgcagtgct gatgggccgt ttggcggtag
     8341 atggaaaata tggcgggttt ggactgggtt ctttactttt ggctgatgca ctcaaacgta
     8401 tcagtaaagc agaaatcgcc gcgtatgcgt tgattgtgga ggcaaaagac gaagctgcca
     8461 tcggctttta caggcatttc ggctttactt cattcgaaga tgccaccaag catctatttt
     8521 ttcctttggc gaatcttcgc taaccccttt ttccgcacca tacggtagcg gtttctaacc
     8581 ctgacggggc aatcccccgt cgccggggtt tgctccgtcc ttttttagga gcatacgatg
     8641 tataaccccg tatcaaaaat agacgaactc ctcccggatt ttgcagggct ggatcaaact
     8701 gtgaccgaga tgcaggaacg tcagaatcaa ataactactg atttcaactt tatcatccgc
     8761 caagtggctg agactgccca aaaaagtacg gaagctgccg tattgccgga ggaatctccg
     8821 gaaactgaac tgccggattc cgacataccc ctgacacagt ttcttgccga gtttggggat
     8881 agtctcttta acgcagttac tgagcaaaac caaccggtct atcagggaca aacttatcct
     8941 ctccttgaag aagtgctgga taacctggaa cgtcctttgt ttgcggcgca gcgcgaagtt
     9001 gtgcgcgccg tattacagca attggtggca gaggacaaac ccgcagccat tattaatgcc
     9061 gaaatgggca caggtaagac catgatgtcg gttgcagcag ccgctgccgc gcatcaagca
     9121 ggtttgcacc gcaccttggt attgagtcct cctcatttgg tgtacaagtg gagacgagag
     9181 atcctcaaaa cggtacccaa tgcccgcgta tggattctta acggagccga tacattggca
     9241 aaactgttgc aaatccgtgc ccttggccgc aaacccgaag ttccggagtt ttttgtgatg
     9301 gggcgtgttc ggatgcgcat ggactaccat tggaggcctt cgtatgccgt tcgccgccgc
     9361 cggatacctt ctgaaggtgc ttctgagggt tttgccgttt ccgagtatta ctgtcctaaa
     9421 tgtggctgtg aaatcttgga tgaggaaaac aagccttata acactgaagg tggtgtgaaa
     9481 aacgccctgg ctaaaaaccg ccgtttttgc aaaggcaatc atcatggcaa accgtgtaag
     9541 gaaccgctct ggaccttgtg ccgcaaggaa cagagtgaag acggggttgt aagcacagtg
     9601 tacgatcgcg tacttaaaac catgaccacc ctacccggca tcggtcctaa aaccgcagca
     9661 aaaatcatcg ggatgtatgg tgagcagtat ctggctgaaa tcttggaaaa caacattcag
     9721 gcgttttcca atttgatgga tgaaaacgga gaatttttat tcgacgaccg tcaggcggcg
     9781 cgtatcgacc gagacttagg caaagcagaa ttcagcctgg gacgaggcgg gtatcagccg
     9841 accgagttcg tcaaacgcta tttaccgaag aactttttcg ggctgttggt agtagatgaa
     9901 ggtcacgagt acaagaacta cggtacggct caaggtcaag ccatgggcgt tttggcacgt
     9961 tgctgtaata agatcctgtg cttaaccggt acgctgatgg gtggttatgc ggaagacctg
    10021 ttctttctat tgtggcggct ttggccgcaa atgatgattg aagacggttt cagttacaac
    10081 aaagggaata ccttgggttc ggcaagcatg gcgtttatgc gtaagcatgg cgttttgaag
    10141 gatattgtcc gacatcttgg aactgaatac aataatggcg cattcagtag ttcaaaagca
    10201 gagcgtaaca gcgttcgcac cgccaaggcg ccgggatttt cccctttggg catcatgcgt
    10261 tatgttttgc ctattaccgt atttcttaag ctgcgtgatt tgggagaagg cgttttacct
    10321 ggctataaag aagttttccg gccggttgaa atgactgaag atcaacaggc ggtctataaa
    10381 aatatggaga gtgttttgag gcagcatttg aaggtggcat taaggaatcg tgacaatacc
    10441 cttaccggcg ttgttatgag cgccttgctg tcatggccgg attgttgtta caaacctcaa
    10501 gatgtttact ggcgcagaca aaacaagatt cttttccata ccgaacccca gttcgatgaa
    10561 gaagaaatct caccgaaaga agctgacatg ctggaagtcg ttaaagacag tctggctaaa
    10621 ggacgtaaat gtctggtcta tactgtttat accgataccc gtgatacgac aggccgtctg
    10681 aaagagattt tcaaacggca cggtattaag gcggcggtaa tgaaagcgac ggtcaaagcc
    10741 gatcaacgcg aagactgggt tgaagaccaa ttggcttcag gcgtacaggt tgttatctgt
    10801 aatccggagc tggtcaaaac cggtttggac ttgttggcat ttccaaccat ctactttttg
    10861 caaacaggat ataacgttta taccctgatg caggctgccc gccgttcttg gcgtattggt
    10921 cagaaggaag acgtggaagt gtatttcgcc ggttacagcg atacagcgca gcaaatttgc
    10981 cttgaactga tggggcaaaa agttgccgtt actcagtcaa cctccggtga tatgcccgat
    11041 tcgggtctgg acattctgaa tcaggctgaa gattcagttg aagttcagtt ggccaaacgc
    11101 ttcgttgacc gacaagattg atgcaatttt tgcatctaac ccgcgtttag tgggtttttt
    11161 cagacgacct cgtgttgagg tcttctgaaa aagcccgtaa ggtggaattt cacaggctgg
    11221 cagaccttat ctgcccgcgc actgccgtta cccattgcgc acgtccttcg ggacggacgg
    11281 ctctttttca actttcttta accctgtggg gatataccgt atccccacag ggcatcggta
    11341 tctccctttt tcatggagat accgatgtga aattttttat attcatcaaa cccgaccttc
    11401 cttttcacaa ggaaagcatt gaatcttgga tcaaattgct ggaagatata ggtaaaacag
    11461 ccttgttggc aatgctgccg ttgttttggc tcaattcata ctctttgacc gaacgtgctt
    11521 ccggcgtagc cgtattggct ttggttgcct actttgtgca agtatatgct gacaaactac
    11581 ggaaataccg tgattcatta aacagaaagg atacgtcatg ctgataggcg gtctgctatt
    11641 tattctcttc ctggtgcttg ctttcggcta ttggattacc aagcagcttg aaacttcgcg
    11701 tacgtcggaa gaacacaaaa accgttaacg cggttcattc tatgtagctc aagtatttat
    11761 cttttacttg gataaatatg aatcaaagat tgtcaaacag gaacccaagg aaagggaaaa
    11821 accatgatca tgacctacag cttactattt ttgattgccg tcatgttgtt tggcatattt
    11881 aaactggtaa agtttggcga gtctcagcaa gacactaata cacatgaccg gtcaagttaa
    11941 ttggtattcc catcttttaa atgctttgtt gctatttaat accaaagcat tttaaataga
    12001 acgctgatac gttccttttt agataaatcc ggcttgaagc cgcaatcccg ctgttccgta
    12061 cgtctgtacg gcagtgggat ttttcttgga agtcatgcgg ttacgttttt tttaatcgta
    12121 tgcgtgtatt tttaaccatt tgcaggagga aaacctattt ttgtatcgga gaagaaatga
    12181 gatatagcaa aaacaaagat tatcaatttt ttatacgcca actggtatcg gggggagaat
    12241 ggatgttcct ccccaaaaac ggtcgtaagc acagcgcatt gaagcaccta ccgaccgatc
    12301 gaaaaattcc gatacccggc tcgccgggac aggatccgcg tggattgctg aattttaaaa
    12361 caatggtacg tcatatagaa cgtggcggta ccttcgatta aactttgatt taaccctgcg
    12421 gggactgtcc cgcacggcat gtctccgttt tttatttgaa tggagaccaa tatggaaact
    12481 caaaaccatc tgatgcaccc ccgtgtcgcg cataaccacc gtgacaacgg atacttcccc
    12541 accgaccagg ccacattgtc gcgtatagcc gcttgccttg atattccggc atctgccgga
    12601 ggtttgttac gcatatttga tccttgctgc ggaacaggag aagccctggc ttctttagct
    12661 tctactttgc aatcggaaaa aataagttgt caaacttacg ggattgaact ggagaaagac
    12721 cgtgctcaag aggcaatgag ccgactgacc agtgtcatca aatccgatgt agaaaactgc
    12781 accatgcagg gttcggcagt cggcctcctg tttctgaatc ctccttacgg ctttgccgcc
    12841 aaagacaatc tgtctaatca aagaaccaaa cggcttgaag aacttttctt cgcacgtacc
    12901 ttcggtactt tgcagcccgg cggagtgttg gtaatgattg ttccggaagc cgccctgaca
    12961 gagcatctaa ccggcgaaat cgctacccac tgtacggatg tccgtatgat aagggctgcg
    13021 gcggatacct acaaacagtt ggttatattc ggcatccgac cgaagaacaa agcctctatc
    13081 agcaaaaaac aggcggatgc ccaacaaagg ctcctgcttg attttgaaaa tgcccctgag
    13141 actttgccgg ccggtatgcc tgcatactgt gtgcctattg cacccaataa ggtctttcgc
    13201 cccagaagct ttaaattgga gcagggtata ttggaacgtg aactgggaca gcagcaatcc
    13261 cgcacgttat ggccatcatt ttcgcaacat ttcggcacca gtgccgttat agccgaaaaa
    13321 cgccggcctt tatgtgctct gggtcagtgg catgctgctt tagcattagc cgcagggcaa
    13381 gttaatggcg ttgtcacctc aaccaatggc cgaaagctgc tggttaaagg ttcaacccat
    13441 aaaaccaaag tggaaaccaa atcggaagag tacggcaaga aggacaggct tgtggtcacg
    13501 attacttcaa ctgaccggtt ttctccaagc atacgcgcaa ttgatttgac cgaaggatcg
    13561 tcggattttg gacgagtcct gacaatcaaa tagattggcc tattcaattt ttaaaccctg
    13621 ccgggtactt cccgcagggg tgtatccggt ttttttaagg atacgcctaa tggaacaact
    13681 tgattcggca gctccggccg catgtgatac cccctctctg tttgacctgg gccgagtgtc
    13741 tatgacggca acagtagatt accgggcaaa agagcacctg cctgcacaac tgtatgagaa
    13801 cagtctttat gcccaaatat tgcttgaggc ccaccgccat ggcatatggg gtgatattcc
    13861 tcctgaggat gccaagccga atcagctggc actcaagcca ggtgaagaag gcagaataat
    13921 gtcttcttac aagattgggg accaaaaaat ttgggttgtt acagaatggg acagaagcct
    13981 taccacactc ctgttcccag aagattactg accttgtaat ctttttatat atctcacctg
    14041 ccttcgggca ggtattttca gacggcttta gtaaggccgt ctgaaaatac ctgtctttac
    14101 aggctgacag accttatctg tcttgtgtcc tgccgttaaa catgacacgc atccttaggg
    14161 atgtacggca ttttctttta tcaaccccgt ggggaacaca atccctacgg actgtgttct
    14221 ccgttttctt tttaaggagc aacacaatgc aaaactttat tgtatggatg aatcccgatc
    14281 gggaagaatc ggcagctgcg gcagctaaat tgaacggtgc agttttgacc gctcacacgg
    14341 atggtgtcat ggccgctatt agacgtgaac tgaaaagatt tggattaggg gctgatttgg
    14401 ccgtctttgc ccaaacctgt gaagagtttg ccaaacaggc taatgccgac atggtttgca
    14461 tcagcagtag caatggtgat gccgttgcag ccgtcactta ccttgaggac ggatacgccg
    14521 gtgaaggcgt atccgccgtt gccgacatgc gctatctgat gcctgcctat cggcagtatt
    14581 tcaaccgtcc tgacaaaatg gttatttttc agggggcatt gcagtattta tcagatgaag
    14641 acattgcctg gattttccgc cgccacatca atgccatcat cgagtggcag tcgaatgaag
    14701 ggctggggct gtacgagttc ggtttcagtc tatctgatgt tctgactgat ggctgccgcc
    14761 atgtgctgcg cgaagtcgtc accggctggc tgaaccgcga aatcctgccc gagctgtaca
    14821 atgtgtaggc ataaccgccg tgtttctttt ccaactgggt aaatgcccat tacctgcggt
    14881 cttttggccg caggggcaga aactctactg gagatagtta tgtctatcaa agttgacaac
    14941 atccttctaa tagaaggaac caaagaatcg gttgccgaag cggcgaaact gattttattt
    15001 cgctcccccg ttcatcctga gcattgggct tttgatttca atcggatttt gcctttaccc
    15061 gaaaatatca cgtctgacct tgccaaacag agaatcgagg catggggcag cagtttttcc
    15121 ccatatccca ccgaaacctt tgttacacaa agagagggtt ttattgaaat ctgcttttta
    15181 accggattgg caccgccttt cggtatttat cgcaaactcg cggaaatctt cgccaacttg
    15241 gatgtatgtt ttacagcgaa atacatcaac cagtacggaa gtttcggcgg acgctacgaa
    15301 taccgtaaca gcgtgcttta ccactgtctt tgcgagatgg ccgacatccg taaattcggt
    15361 atcgccgaat tcgatatttg gtacgaaggc ttgtccgata gacttgaaag cgacgggtat
    15421 ttggtagaag attagactat gttacacggt aggcagtccg tcaaaccgcc cgcataccgc
    15481 cgttaaccaa atgcacatcc gtttcggatg cacggctctt ttatcaaccc tgaaggggat
    15541 gtattccccg tcatcggtgt ggtggtctgg agtaacggat atagtgagga gatgaagaat
    15601 cttgccatgg caggattggt gctcctgtcg tttgaaatgc tgtatgtttc attccttatc
    15661 cgcattcaca tctctaaact ggaggacaaa taatggactt cgttaccgga acttgggtca
    15721 tggccgcagt cggcctggtt cttgttattg ttgcgagaat ctatcttaaa acccccaaaa
    15781 aataaccgtg cttaagcaca tttttcatca agccggcgga accgtcgttc cgcttcccaa
    15841 aggcaaagtt accgtttcgg tttctttgcc ttttatctaa agcacctgtc gtctgaaatg
    15901 tgcgccggtt tccggtggcg gcttttttat caacccgggc gcaagcctat caacctgcgg
    15961 gtttccttat ccgcagggat ggggattcct gctcaggaga ctactatgcc caactggtgc
    16021 ggcaacagcc ttcattttca aggcaatcct caacgtatcg ccgaagtggc ggagcaaatt
    16081 ctgatcaaaa ccgacaaggg gtatcaattc agctttcagc atattgtacc catgccggag
    16141 gagctgattc ttcctgaagt gcctgatagt tacatgcagc agacctggtt tcaaattgct
    16201 caacaacctg aaaagaagtt gatcaatttg gaacgggaaa tgctggaaca gcgcgataaa
    16261 tccttttggt ccgttcaata tagattgccg gatgaacttt tctctgaatt aaagctatat
    16321 ttttcggaaa aatttgattg ggacaatctg actgttggtg aagtatttct ccattttgaa
    16381 gctaactctg aagtcgcatc tcgtttccgt tacgatggac catttgccaa gcgtattgcg
    16441 gaaaacatcc gccaatacgg tcatccgaat tggtatgact ggcggttagc taactggggc
    16501 tgcaaatggg acgtaaaccc cgactgcact tttgtgacag ttggggaaag cggcatccgg
    16561 atcagctgtg acactgcctg gggtcctccg gaagggattt atagagaact cgccaaacgt
    16621 tttcctgacg tagaatttga agccaaatac ctggaagaag gaatgtggtt tgcaggaacc
    16681 tatgaaggtc atgaaggagc attgttcgat tatccgtgca cagatgatgg agtccgtgac
    16741 ttcgctaccg agcactttgg atgcgaatac gatgacgaag attaaagaac ttagatttcg
    16801 ttagacgtat tgccaactca ccctgcgggg acaacccgca gggttgtccc ccgctttttt
    16861 gtggagatta gaaatgattg aaaatcagat tgacaaagag atcactcagg cttcatgcga
    16921 aggccgattc atcctaaaac aggaaaacgg caaacgtttc ctttacctta acctgcccga
    16981 aggtagtgac gaattaaata ccatttggca gacggacgag tatgacttta ccgtacccga
    17041 cttagaagtc agcatcgatg ttgaatccct tcacactgct gttagacttt tgaacgaaaa
    17101 ccagggcatt ttgcacggca tcagcacaaa atgcagtgcg tattcgttcg gtttcgaagg
    17161 aaagttgaga tacgaaagat tggatgtaaa gcctttccct atcaaatcgt tctcttatta
    17221 tttggagttt tataacgact ggacggggac gttgtatgaa ctggacttat cagcgttcct
    17281 ggatgagttt ttcggagagt gtgatcctga atccaagctc gatgcctgtt tgaagtagca
    17341 tttgtgcctc aaataatctt tttcaaaacc aacggccgct aatgcggccg tttttttgtg
    17401 cccatactct gatatttttg gggtctctgc ccccaatccc ccggtctcgc cgccgacagc
    17461 tcgggaacag gaattacctc cggcctacgc ctgctccctc acttaagcgt gtcatcgctg
    17521 ccagtcagta aatgggtatt cataaacgcc cttgcaggtc gaaggggttg ggtattgacc
    17581 ctgtaaggaa atttccttac aataaacaga attctttaat ttaagcagtt tttaacaata
    17641 tcaataattt cccaagccgt taagtagaag atgtgcgtaa ctaggacatt gaagtcgcaa
    17701 gtagcaacag taaatttgaa tgaaggcagg gcaaagagac catgaagatt atttttgatg
    17761 cagtgtcaac tatgaccagc aaaaaccaaa caaccattcc cgagtcagta cgcaaggcgt
    17821 tggggctgga aaaacaggac aaaatccgtt tttccgtctt aggcggcgga caggtattgc
    17881 tagaaaaaaa caatactgag gaagaagaat ttgagcatga tccagttgtt ggaaaattcc
    17941 tgcatttttt ggaaaattct atgacaaaaa atccgaattc catcaaaccc acatctcaat
    18001 cacgctttaa ccgccttcgc caactgactt gggaaacaga tatgaaagac taatatgcct
    18061 gattccccta tgcagataaa cggatatacc atttacgaac acgaatgctt tacgcggcaa
    18121 ttagacagac tggccactac gatagaaagc cagaaacgat ccgaaaaatc cagtagatcc
    18181 gaagaggcca aactgctgga acgaatctta ggcgaaatag aaaatattgc ccttaatccg
    18241 gatagcccgg aatatcggct tggcaagaca ctcggcccgg aatacaaatt ttggcgacgt
    18301 gccaagttta tgggtagata ccgattgttt ttccgttacg actcaaacag taaaatcatc
    18361 attctcgcat gggtaaacga ctcgggtacg aaaagaactt atggcggcaa aaatgatgca
    18421 tataccgtgt tcaaaaaaat gctggggaac ggaaatcctc cttcagattg gactgcactg
    18481 cttgaagtag tatcaaagga atagagcaaa agaaaacagc ccttagaaga ttctcatggt
    18541 caaaatacag tattagactg aatgttacaa cattgtaata ataattgctg ttatctataa
    18601 tgttgcccat gtccgtatat gagccggaca aatctaaaaa ggggggggga gaaaaaattg
    18661 ccctttggcg gcaaacagga tatataggat tttattgttg tcttattctg atgatgcttt
    18721 tcttcccaaa ggattttaat cgtttgaaaa ttattgctta tacgagtccg gatggtgatg
    18781 aatgggtaac tgcgctggaa gcaaagctaa aacaccggga aggaatgatc tactacagcc
    18841 gtcatcgtcc cggtacaaga aagaaaatgg ttttgaccag gaggaaggcg accaattttt
    18901 ttcgctatta cagtgaagcc gactccggtg gtgcttccgc ccctgaatcg ctaacccact
    18961 tgctttgcaa acaagtgctg aacgaactat ccaacttacc cggcggcctg acgactgttc
    19021 taaattgcac agaacacgcc gagcaacaac cgcctgtcac tattaggctg aaccgtgcat
    19081 tatccgaata tcggatagat atagatggca aaacttttta tattgatgtt ttgcttgaat
    19141 ttgatcagcc gggtaacact tccctgctca ggcacgagat aaggtggcag agaaaattgg
    19201 cggttgagat ttggcataca tcacggttgg cttccaatgc gcctaaatgt ttagccttat
    19261 cgaaaatagg tatcccggtg gttcagatac gggcagataa gggttcattt ttgtatattg
    19321 atgaagacga gctgctcaat tatgataatg aagaaatcaa aaaccgcata aatcgccatg
    19381 tagagaaact tcggaacacc tttcggaaac aaattctctg caccctactc cgtaatcctt
    19441 tgagtgcgga ttttcagacg gccttgatgt tgcataatca aataaaggcc gatgaacaac
    19501 aagcagagca aatacaggaa aaatttgagg cgctgaggaa taaacatgtt ttattggaag
    19561 ctgaatattc ggctttggcc gcccaatacg cagccttatt agaacatcag aatttccaag
    19621 ctcactccgg gaaaagggaa attccgaaaa agcatgggat tctgcagcgc atggccagtt
    19681 ggtttaaatc ataaaccact gtttagaaca aaccctaagt ttcaataaga tgaggaaaat
    19741 attgcaatga aaaaaattat gttcggatta ttagcagcta tggccatttc aaatgcccaa
    19801 gctgaaggta atttcttgaa tcttgcatca aagccggcca aaattgacgg ggtattggaa
    19861 gcttctttag acaaacccta tcccaagttt gtacaagatt ggatgaaaga cagtaaattg
    19921 gcgggacttg gccgtatcat ccaaggcaag atttttgaaa gtacgggaac tattgaacga
    19981 aaattctatg caagatccga atccgaacat gaaaaaacgg ttgaggatgc agtaggaact
    20041 ttcaaagcat attgcgaaca tcatcagggg acggttgaaa ccctgacttc cgatattttc
    20101 tgtatcaacg gcagacaagt ccagtggatg ggatggtggt acagagaaaa ctatacgaat
    20161 tttgcattct ctgatggata tacaggggaa caagcctacc gcagcaaagt tacggatgta
    20221 caacccggta aaaaaatctc cacttcctat gggcctgcct tggtcttaga aaaaggtgag
    20281 aatggcttaa ttaaaattca gccaaacaga ggcaatgaac gttggattac aagtgatagt
    20341 attcaagtaa cctataaata atgggttgtg catcatataa gaaagaggat tggtagctga
    20401 aatgctgcca atcacatgga gtgcaaattg aaaacaaaat ctaaaaaact tttgaggctt
    20461 gttatcttat ttgtagcggc attctccatc tctacacctg cggtaatgta cttcagcaca
    20521 ggcgaagcga cattaaatct ttttgttgag gggttttgga taattggatt acttcaagca
    20581 ctcgctttta ccaccattgt agactattgc actgaatcta aacatacaaa tatgctcaat
    20641 aatccagcgt gcaacgatga agattgggat aatgatatgc tcaataatcc agcgtactct
    20701 tggtcaatgt tcaatattca ccattcagat taaaaaagca ggagccttat actcctgctt
    20761 tccgcagcaa agttacggat gtacaacccg gtaaaaaaat ctccacttcc tatgggcctg
    20821 ccttggtctt agaaaaaggt gagaatggct taattaaaat tcagccaagc agaggcaatg
    20881 aacgttggat tacaagtgat agcattcaag taacctataa ataaaggaga agtatcatga
    20941 tcggattcgt aaaatggtat agctatgaga aagattttgg ctttatcttt ggtgaagatg
    21001 gtcatgaata ctttttccgt aaatccgccg gttcagatat accaggacag atagtgaatt
    21061 tcgaaccatt tgagcatagt cgtgggctgc gagcgcgaaa ggttggtaat atacataatc
    21121 ctgatcctca acagatccaa aaattgaaaa ccttatgcaa agactttcag aaagttgaaa
    21181 agcaacccat gtctaaaaaa tacaacttgc tttcggcagc tatattatcg ctgtgtttga
    21241 ctatgttcat aacactgggc tttttctaca tcttagccgg cttttttgat actgataggg
    21301 agactaacat agttttgctg tttgtcttcc ctgcggtaac tttttccgtg ctgacattct
    21361 ttctgaataa gttattcagg aatatgaaac cggggtctga tgctgatgtt gtcaccaata
    21421 atgattggtt aaacgatttc tgggaggata ggcgtcggca ctgtccttcc tattcacatc
    21481 atccgagcaa tatttggcat ttatctgagg attgattaat ttataaccca gctttttcca
    21541 atctcaattg caatatattt catcgatcaa atgacgatat ataagaaaga ggattggtag
    21601 ctgaaatgct gccaatcata ggagtgcaaa ttgaaaacaa aatctaaaaa acttttgagg
    21661 cttgttatct tatttgtagc ggcattctcc atctctacac ctgcggtaat gtacttcagc
    21721 acaggcgaag tgacattaaa tctttttgtt gagggttttt ggataattgg ccttctccaa
    21781 gcagcagtat ttacgtttgt ggtagactgc tcaagtagtg atttaggttc attaagtcaa
    21841 tggcaaattg gaaatgactg ggacagacaa atggatccat tttacgctca tgaaattggt
    21901 aacatttggc atggaacgca cttagactcg agttctgagg agtattggaa ataaaaaaca
    21961 ggagatttat aaactcctgt ttttttattt ccaaaagatg gttaaattat ctatgtttct
    22021 agtaccttac caattgaagt gatgatttgt tcgaaagctg atttgccttc ttcggatact
    22081 agatcgttac ctccactata actcattcta acttgataat tcccttcatc aacctcttca
    22141 atctgaacaa caatttgtgc aatactcatc ttttaaaatc ctctctgcct aaagaaatta
    22201 tgtacaaaac cccaacttcg tttgtgttgc cggtattcat taggagctgt tgggaagctg
    22261 gcccagatac cacctaattt catgactgcc ttttcataat cgccatttaa aatagcttcc
    22321 attgcacctt ttttagccaa aattaaggcg acagcagctt tgtcttgtgt ggcgggacta
    22381 aaatccgtga agccatattg ttttgccagt cctttccatg tgtatcccat gaattgatag
    22441 cggccggagg catcagaagt acttctacta ccatcggttc gagtaaaact acgtctaaca
    22501 gagttacccg ggtgacggga gaagtccgta attctataat tacctattgc cgtctgataa
    22561 ccatgtttta caccttctga tgccgcaata aaatctaaaa aggcgcgcac ttgcggatta
    22621 tgaacatatc gctccaattc ggcttgatta tgagcagttg aagcttttaa tacatagttt
    22681 cctctcactt gtcttccact ggatatccca cgccacataa ccccgttgcc tccatatgag
    22741 gtggcattac gcaacggggt tattcctttg ggcggaatac agcggatccg ctagacttcg
    22801 tattcccagg acgttgagga attggcggat caaattcgga tgctaaagct ggattaccca
    22861 aatgggctgc tgcttgatcc gacccagaac ctatgtatcc ttttccttta cgaacgtctt
    22921 ccatcagatt attgtacctt tcaccgaaag agttccaggg taaggcgtga gtattaattc
    22981 tcatggttac cccattcgtt tcatcttgag ctttttgagc atgcgttgcc aatctaccaa
    23041 cttcttggcg gtggctattt ctaccttgat taatatcgcc ttcaaccttt ccggatttat
    23101 ttgcatattc ctgtttcaga ttctcacccc tagcgttgat agcagcatta attccatccg
    23161 gaattatacc ggcctgatga gcttgggttt gaacatctcc aaatgccgcc ccagctccgg
    23221 atgaaacttt atcagagaag tgtttataag cggcttgcgt attgttttga ggtctatctt
    23281 caggggaaag gtcattaggt ctccagcctg aattttccgc agcagctttt aaacgatctt
    23341 gactatttac acctgcacga attgcagcat tgtaggttcc tccctgccct gcattcaatt
    23401 cactcatagt caattcgggg ttgtcttgta ccaatgcatt tgtgttatct tgggcaatgg
    23461 taatgccatt accatatgtg cgagctgcca tctctcgata agattgagct tcttggtagc
    23521 tttctgctga catatgcgcg gcttctcttg ctttgctaaa gtttgcttca gcagttctaa
    23581 ccaaactatt acctgaatta agaccaacct tatatgcttc agattgagaa actttgtctg
    23641 taaaattact atcgaagcta acaccttggc gaattcctgc ttcaatgctt ttacctattt
    23701 cagcaaccat ttgatctcta tttgtagcat ctcctttcca acccaatttt cctttgtcac
    23761 caataaaact ttgcatattt ctagccattt ctccaatggt accagcactt ttagaaagac
    23821 tttctaatcc ctgcgctcct ttttgaatca tagtttgagc taatctcgta gatgcagatt
    23881 tctgttcaga tgctggttca cttccgcctg cacccagtcc tattgcaatg gcagaggcaa
    23941 tagaagaagc attgctgata ttaaattgtt ggccaatctt cttacctcga tcaagaacgt
    24001 aagataattt tctactttca gctgcatcca aacccattcc gtaaccttca gaggcacttc
    24061 tatccatacc ataattggtt gcaaaggcaa ggcggtttgc attgccttga gatacggact
    24121 ctcgaaagga agcttgccat tgttgggcag atgtttctgc tcggtctgca gccttcgaat
    24181 atgactctga ttggctaatc tgtgattgag aggaaacacc aagactacta ttcctcatct
    24241 gcgctctact atctccagtt gccatattcc gccatgatgt tccggctgca gattgagcag
    24301 tcatcatttg aggatcggta tatacagggt ttaagctatg tttgttggca ttgctattgt
    24361 tgtagttcat attgccggca gagtaattcc ccgaccctac ttgggaaccc gctgcttcac
    24421 cggttgattt ggccgatgaa gtcatgccca tcatgccgtt catcaggctg cgtccgccca
    24481 tggcaagagc acccgcgatg accggaatca gccacattgc agccccagca gctgcttgtg
    24541 catcggctgc tgccatcaat aacgtatcac ctgttcccgg tgtaataacg ccgttggcgg
    24601 cttccacgct aaacagacgc ttcgcattca tagtcataat catattgatg atactggcta
    24661 cgggtgccca aagctgaatc catagcatac tcatcatgta gaagcttaat aaccggaatg
    24721 ccatgatgcc acccaacatg gcgagaatca ttacaaaggg gaataaacca atcagaatgg
    24781 cctcagcagc agaacgaatc aagggaagat tccaacttgc cattgatgag ctggtttttt
    24841 gggccgcaat atactgatta cgagcttgaa cttgagcaaa tgcctgctgt acggcagccg
    24901 gatttcggtt gcgttggcca ttgataatgc ctgcttgacg aataacctca accatcgccg
    24961 cctgttcgat atttttcaga gtatcgaagc gggcattgtc cagcagatac tggaatgagc
    25021 tattgcctaa cgtggccagg gcatttaccc ggtttattcc tgccgaattt gtacccaaac
    25081 ctgcaaaaac acgatcggca atgtagccgg gcaagtaatt tttgctataa aaccgggtac
    25141 ggtcttttag ttcttttgcc gcctcattgc aggtcatggt ctttgatttg ccgttatact
    25201 gcaacatgtt gcctcttctt gaggcgatct gcgatacatt ggtaaacaag gcttggttgg
    25261 tatgggtcaa tgtagccaga atatcggcac tctgtgccag atcctgcacg ttatagaagt
    25321 gatacaggtt catatcaaag aatgaacact gatgcatgaa cagtgcccag tcttgagtca
    25381 gttgcgcgtc cgggattcgt gcttcacgga tattttccat caggcgcgtt ccgaacagca
    25441 tgccggtgcg tgagtaattg aggtcgtccg gcaggtggtt aacctgctcg gctttgcggg
    25501 taatactttg gccaaaagaa ctgacaaagt agcccatata agcaaggcct acgggtacat
    25561 taccgacagt atattgacgg cctgtatatc catacccacc tgattcagta atgagtacag
    25621 tggttttagg gaccatcata cccatccaac aaaataacac gacaaacaaa taactgaagt
    25681 tatccttcaa atccaatttg aagactgcaa cagcaagagt gaccaggaat ccaaataagg
    25741 cagcagcctg cattgcgcca cccatcatcg tagatcctga tattgtggca acgccattga
    25801 aaaccgcccg tacagcttct ccgttaccag ggaaagtaaa gtattcgaca gccatcatct
    25861 ctccttagaa acggttcatc gaatcaaaag tcatggagtt gttggtatcc acaaaggctg
    25921 agcgccattg tgtttcaaac tgctccatag ccctcatcat gctttcttcg atctcgattt
    25981 tcttcattga gtcaatgcgc tcctggtaaa ttctgcttcg caattcgcca aggttggcaa
    26041 acaattttcg aaccgcttcc ccgctggcat cgtctgtctt gttatacata cccaaggtcg
    26101 agcgtacctg gcgttccgat tggtccaaaa tattggccat aatatcaacg gcaatcgcat
    26161 ctaaaaccgc tgtttttttc aaatagccag ttccaaggaa agcatctgat acagccattt
    26221 tcagtatggg caatttactg ttattgacaa tggcagcaat ctgcttgcgc gtagataaat
    26281 tccaaccttg gttattcctt attgcagtcg gaagcgtttc aatgcgtttg tgaaccatgt
    26341 accgcaaaga aggtatttct acatcatttt tctcagtgca gttctccatt aatttcttag
    26401 aaccgtcttt gcacgtccac atatccaata caaccttctc ccggatttct cccccggcat
    26461 tgttttttcc gtttaaaaga tcttggatgc tgaggatttt tggttcgaaa ctttgaatac
    26521 ctactgtgta tttgtcctta tccccttcat gttgtgttaa tggagtgaac acaattgttc
    26581 ccagcatgct gtaatagaag tccatgtcga tacccagttt cgagcgttga cccgtatagt
    26641 tcttcatggc ctcataagtc aaattaccgc cggtaaagct aatcgtatct tggggttttc
    26701 cggtgtttcg caccttatcg gcttcatgaa caaggttttt agcggcctga cagtaccaag
    26761 taccttctgc cgggtcattt gacgaacccg aatcaactga tgcggcgcga caatttgaac
    26821 tggccaacga acccagtttt cccattgcgc cgccgacaat atcctgactc agtttgcaac
    26881 tgtttaaact gttttgatta acataattga ccaaatcacg aataccgcca attgcatctt
    26941 ggatcatcgg atcaagggcc ttaagtgcca ggtcaaaggc tacacctgct gcgttattgc
    27001 ccaggtttcg cgtaaattgg atgaattgtt ctttattgac aaacgagaaa gagccggcaa
    27061 agaaatctat accgccgcaa ccggcactga ttgaaggtaa ttgaatattc ccaaggctga
    27121 tatccgacac cggaaagcga acactcatac cgcctcccgt atataggctg ccgctttgac
    27181 cgtggaacgc acctgcttca gtataattgg cttccgctcc cattgagtta aacatgtcag
    27241 ccatgttctt ctctatgccg gcactactat tgatcggaag ggccagcgat gccgtcaagc
    27301 atagatattt tgcagaggaa gcacaaactg ccggcacttt ggccggcttc ggaaatcgaa
    27361 agatgtgaaa tttcataacc gctccatgaa gcggttatag cagggaaatc cttactataa
    27421 ccaagataag ttacagtaaa gacttgagat taagggaatc ttattttacc tgaaatatcc
    27481 gcgttgtcaa ccggttaata catagaaata taaatattga aggccccgta tagggccttt
    27541 gatttgatta atacaatgtc ccgacagggc gggaatacgc taagaaacga tcctcaagcg
    27601 tggtttgcgc catcacccca aatccaatgg gtgtaaattg cttggttttt gtatccatga
    27661 cgtacattgc aggtacagta gtaatattca acctttgggc aataccgttg ttcggcaaag
    27721 cacgcgggaa gtgattaata cctccgccat cgagactgac cggcataacc ttaataccgt
    27781 attggtcggc aaagtttttc aaaatcggcg ccatggtatg acagtaaggg caatccgatt
    27841 tgaaaacaaa cataatgccg ttctctccgg caagttttct aattgccccg gccttttgtt
    27901 gctgacggtt atgatcatat tgttgctggg ccagttggtt gttcggacga ccgcgctggc
    27961 tgtaatccaa atttgggttt tgccaaatta ccctttgcca ttgatcggca aatgccgcag
    28021 atttgttcat cacaacctct tgaagttcaa tatatcgctt caaattttga ggtgtggggt
    28081 tcatgacggc aattttacgc gactcatcca aatttctttg cagcatttca aattctgcaa
    28141 gttcattacg aaccggagta ttttgaggcc ggttttgtcc ggcttgtttg ggctttttag
    28201 catccggata ccataagaaa gcacggtttt cgtttttcca gatatcttgg tcataccatc
    28261 ccatgccatc atccgcagct cgcagattgg aagcgtgcag gctaaatatc agcatgacgg
    28321 ccatccgcac tcttttcatt ttttaccacc gttctttctg ttcgggcacg ccccgatatc
    28381 cataatttca gacggaaagg tttgcgacag tgcgggcgaa gtatggaatg tcaagcgaac
    28441 cctgttgcat ccgggtttgt ttttaatttc ttccattctg accgcctcga caaaaatagg
    28501 tatgtcctgc cggaatttct gtttgacggc agccgcagca cggccgctga aatacccttt
    28561 tgccgaaccg tgacgcattg ccagcgcaag caaggcatcc ggcttgccgt caggaagcgg
    28621 gatggaagtc cttgctagag cttctgtttt ttccaaagcg ataccgccgg tataaggaag
    28681 ggatgcggca agtgccatac ctgtaaaaaa catacccgat acaatacccg ccgacgcagc
    28741 caaccaatta ttgatattca taatagttct tcacttccaa atttttccca ttaacggatg
    28801 cctccctgat tttttgtgaa accttttgcc cctgcttggc cacgttgtcc atgttggcat
    28861 agatttcttc ataaaacccg gacagatcaa gtttggaaaa gtctaactgt tccaattcct
    28921 gtgcggtaaa tccttcgcat ttcgggttct ccggcgtacc ccaaccccgt ttcaattgct
    28981 ctttgccgcc gacattgact attttggcta atttggaaat gaaacagcac tggctctcta
    29041 tcattgttac acatgccccc aatattttgc tgccgcaata agaaccgaca taatggcaca
    29101 aatctgcttt acgcttcatg gcaactaaaa tttcactttg cgggcacttc aaccactgtt
    29161 ggatggcgat tacggcaata gcagccgcaa atacggccgg gttgaagccg acaattaccc
    29221 ccataccctg ttgtcccgca gcagagaaac ccaacgcacc aatctgagat gttccggtaa
    29281 taccgccggc cgcactcagg gccgtaccca ttgcctgtgc tgcggagctg acaaacatag
    29341 tggtaaacgt ataatggctg gcaacgctgg ccataaaata cgttgttgcc atagttgtcc
    29401 ctgtctgtac cgcgaagtca acaaatttgc ccggatctgc ttttgttcga cagcagtctc
    29461 cgccgaatac gctgtctaaa gcaccatcca gcttgataga gcattgcccg gcttctccat
    29521 tgaaaaaacg ctgtttttcg ggatcataaa accgttgcgt ctcacgggcg aattccatcg
    29581 tcgtcatagt tttggcaaaa tcccgatcct gacaaccgga tacctctttg gttgtctctc
    29641 ctttttcggt acattcaaac tgtttttctc tggcttgaca ggtaccgtcc ggcagctgat
    29701 gcgtacactt gtccccaatc agacggcatt ggtctgagga tgtataagcg ctgcatgttt
    29761 cggaatcgct tccgtccgta cattgcacgg tgcgcctttc tttccagcaa tcacgtgtaa
    29821 cgggtacgcc gttgatggtc ttggtactgc cgggttccaa acactctgtt gcaattgctt
    29881 tacatttttt tccttgtacc tgacatgacg actcatccca ttgcgaacta atcagatggg
    29941 tatgctccat ttcttcgact ttggtcggaa gccttccttg atgtaacgtt ctcaaatcca
    30001 catcgcaaga atacttgtgc gtgtaacgca aacactcccc ctcattcgac tgctccaaac
    30061 aggtttgtcc ctgtacttca cattttgccg aagggtcttt taacggtgcg caataatcgg
    30121 cagaatcctt ctcaaggcac tgatactctt ctttgtattc ccaacagtct ttagttacgt
    30181 cgaccccgtt gatgtttttg gtcgacgggc catcaacaca aacggaagac gtccgggtac
    30241 acgctgcact ttccctgagt gcggcagcag acgctgaagt gattaacata aagtggcaga
    30301 tcataaccag caaagacgtt atagccctca ttgttttacc ctcttctcat actccgaaca
    30361 actgttttcc catttatcgt gacaaacggg ctcgcagtat tggtgtacat taaagaagat
    30421 agcattttct ccgccgcctc cgacaacggt gcgggtccaa atggtatttt tgccctgatg
    30481 cagatacggc cgtatgtcga tgttcaggtt tttcctccag gatttacctc tttcagcgtt
    30541 acccaaccga gtaccttcct cattacgtac cggtgcaaac cttcttccta taggaaatcc
    30601 atcttcatct tttgcagtat aatctgccgc aaacatctga ttgttatagc tgctgtacac
    30661 aattttgccg ttgactttga caatcagcca atcatcgtac tcaacccggc tcaaagtaaa
    30721 cagcgtcagt ttttccggat ttttcacatt gagcgtcatc tcccgatcat actgcccgtc
    30781 acgccaatag ttgtcgccaa tagtaccgaa catcagcctg tgtgcgcttc ccgaagccgt
    30841 cagcctgacc gtcatatcac cctgcaggct gcctgcttct atacccgaac gggtacagtt
    30901 tggtcctgat ttctcgcata ccacctttaa tttcttgccg cattgatact gctggtttcg
    30961 atatttgctc tccaggcagg aatagttcca gccgggatcg acattgacct taagggccgc
    31021 ctcgcacaag aacatctctg cgccatggta ttcattgcaa cgtttgacgg tttttaccgc
    31081 aggaacggta atggtttccg taggacatgc cgacgaggga actgtgccga cgctgccgtc
    31141 ttcattgacg ggatatttcc atttgtattt ttccagtgtt tctgccggat cgcctgcaat
    31201 tttctgcgtg cctttaacca acttttcatt tgaagatatg gttacatcgg gccgcttggt
    31261 acggcttcct gcaatcaggt ttacaccttc gcattcttga cgaagataga gatccggatt
    31321 ggcaggcaga tttttacagt cgttgaattt ggcgtcacca aactgagtcg gaagagaaac
    31381 tccgccaccg taatactgtt cagccattgg tacgttgtct gtatatcttg gggtatattg
    31441 ggcaggctgc atcatgtttg ttgcagtccc ggcccccaat tttcccagtt cgccgacgta
    31501 actaccgtaa tctgcagcaa aggccgtctg catgaggcca aatacagtta gataaatggc
    31561 atgtcttttc attttctgcc ttccagaacg gctaatttcg catttgcaat atcggaaagt
    31621 tttttatctt cagactcacg gatcaagtgt tccaaagccg aatgcaagga cacatcaccc
    31681 tttacggcaa catgttccgt acacatcccc aattctgaat ttacagcgca accgtctaaa
    31741 ccatcttcgc tgtttcgggc gattaccgta acagggactt cggtgatgcc gtaatggtcg
    31801 aagagttcgg gatgaatcag catatcgcct tgcaaagccg caagttcttc ggccgcctta
    31861 accgtggctt tcagtgagtc gtctttaaac ccgcggataa ccattacccc gcctgccttt
    31921 gctgtttcac gggcaatgcg tttcaagctg gcttcgggca ttgaaaatga tacgaatacc
    31981 attaaatccg ctttttccgc agcctgtcgg gcttcttgtg aggcagtgcg gtatttttgt
    32041 gcgatagaca tcggatcagc cttgattttt gcatttccgt aatcacgaac atcgggcaca
    32101 cggtgcttga tacctttcaa atccggaatt tcaggttgct gccgattgtc acccacattt
    32161 gggtttttaa ctcgggtaac tttacccatg gttgtacgca gacggtttcg cgccgcctct
    32221 acatccgcat cggcgtaagc actgcctact ccggccaaac cgcccaaaag aatgaggaag
    32281 acgcctccgg ctacgattac attgcgtaaa gacttgtcca tcactccatc tcctgtcaat
    32341 tagtcttaaa tttatatgca ccgcagcagt cgcgcttacg gaaaagctgg aaagcaaact
    32401 gattaccttt gtatggaaat gctttgccgc tgtctctgac taatgttgaa cgtccaatag
    32461 gctcacagca acggcctctg aattttcggg cggccaccgg ataggtcata gccattttat
    32521 agttctgttt atccattacg ggattaagtt tgtacccgca taaagcatcc ctgcctgatg
    32581 tcctccaagc tactaagtcc ctgtgcattt ttgtctgaat tctagccgcc atcaatttag
    32641 cggcctgcac ttcggagaag tggccggaca tccatcctga caaagggtaa atcgttccgt
    32701 ggcaacctgc acaccaatac aatttattga atggaaagcc ggcggccgct ttaacacagt
    32761 cagccgcaca ggctgcttgt gcaacgacat tggcaaagag cgcagaatca ggggcttgat
    32821 aaacggccaa tgacggatat ttccaagtgg gatcaagttc cgtcatccaa ccgatatcca
    32881 aagtaccttt ttccatacaa tcgttgtcca ataaggcttc caaccaaaat acgaccggat
    32941 ttttatacca atgaacttga taaaaggcat tatgctgatc atgttgttcg ttacgaccac
    33001 gcttatgcga gccgccaaaa agattttgaa tcttattgga tacgtctgct ttacctgttg
    33061 tttccgccgt atctgctttt tgatttttaa gtgaaatacc gcctaggcta accatacaga
    33121 agggggtgcg tacgacttct accaagtgtg tgggttccca aaatgatacc gtcacgcctg
    33181 aacggctcgg gtgcgtacac gaacaaaacc aattgtttgg agaagagccg ttatcctctt
    33241 gattatccat attcagattg attttgccgc cgattttgat tgggaacata cagctccaac
    33301 aaatatcatt tatcggatta agcatcttcc cctggcaggt taatttattc ggtatcggag
    33361 cagtaggaac agcttcagcg gcgtgagata tagaaaataa tgggagtagt aataacggaa
    33421 tcagtaattt cagcggtgtg acaaatattt tcacggtttc atgacctcta cacggagccg
    33481 gcccccttct tgggagacca aacttggaac ttcattcagc tgaaaacttt tggacatccg
    33541 cccttcttgg tcgtaataaa ccgcctgatc catttctact gataactcat accaattgcc
    33601 tgcagtcaga ataggcatga atgattcgcc atattctgct gcaagtttct tggccagttc
    33661 gatttggtca ggttcccggc cgtcaaagaa aaacattttg aatgggattg gggctgcttc
    33721 caaaggtttg acaacagtac cggcaggagc aataatttga ccgtcttggt cataaattgt
    33781 ttcggttaag gtataacttg ggtcgaagta tcgaacagag cctttagttg ccttcgccag
    33841 tccttccaag ggctgtagat ttaaggcgga gcgatttatt ctatcttgga cctctttctg
    33901 cattgccgcc aattggccgc tgtcttgttt agctttcaaa cgcgcttcaa tttcgcggat
    33961 tgcatgtttt tccgctattg ggtatgtggt gccgattttg tcgccaacct tctcgacaga
    34021 gggtgtcgaa gcggctaccc atgaggaaat tccggttgca agtattacta gcgatgcgac
    34081 tgaagctatt tttttcttgt gggacatact cactcctaaa aaatggggac cgccttacca
    34141 ataatttgcc ctgaatggat taagccggat aattcatatc gactgtccaa gctgtctttg
    34201 tgccctgttt taacccacat gaaccgttgt ggaatttccc cttcgaatgg gttgatggcc
    34261 agcttcatgc catccaggga gtattctttt gcagtaccta cctctttccc atctatgaaa
    34321 aaagtacgat tcgccttcgt tacatgattt ccgggaagtc cggcaacctc tttgacgacc
    34381 tgcgtaccaa tagggtaaaa accaccttgc catgcaaagg ccacataatc gccctgcttc
    34441 agatcactta gcttgttcgc atcttttttg atgaagtaaa gatggtgagg caaggaacgg
    34501 gaaagattaa atgccaaagc ataatgttga ttgaatgccg acaagcagac cgcaactgct
    34561 aaaaaagggg ttgcatattt ctgacaaaac tccctataaa gacgtttcat cactgctttg
    34621 ttgctttctt tttgtgatat ttttatcatt gcctcaaaca ttaacgatcc atttcttctt
    34681 cagtaaccgg ggtgccttta ccctcttcgg ccatcggttt cggaattgtc ttttcaactt
    34741 gttgatgtac cggtgccgcc actacagctg tggccgggac acgcttatcc aactctttca
    34801 taatgtcagc agtaacatca accacctctg tgttccgtcc gaccaatgca gatttgacaa
    34861 agatgttaca gccgcaccga attacctttt cttcgataac ctgttgcaag gtattcatct
    34921 ttgcttggta gttttggagg atcgcggctc gttgccggtc ggaaattcca ttctgcagtc
    34981 cttgattctt cgcctgttcc cggtaagtca tggagatacc ggccaaatct acaatatgga
    35041 ccggtttctc atgggttttc atgaaattcc atacgcctaa tgccaatgcg gcaatagaaa
    35101 ttgcgccgat cacaaggctg cccaatgaaa cctctacgcc gttatcctcc ggattctttt
    35161 ccggatcggt atttgccgtg ttttctttct tttcttttgc ttcagtcatc ttattaatat
    35221 cctatcctct gcctaattag cgggttgcgg cacggtccct taaaactgct tcaatggcct
    35281 cggctgtatt caacccctga tttctgtaat ggttcacggc ttcaacgtct tccgcttttg
    35341 agcttgaggc aagaacgttg aatgggtccg agtacaacct acctactcca taacctatcg
    35401 gggtagagac aaatatttca ctgtagtagt cagttttgct caaagttcgc agaatctgca
    35461 taatcccgtc attgacttca aaaggttctt tgtcttgaat ggttttgagc gatttagccc
    35521 cggtacgcaa ttggaaaaca aagtcggcat tctctaatgc cgcctcagcc gccttagtct
    35581 tgtagtagtc atttgcacct tgcgtcagag tgccgcatgc acctttgtac ttacggacac
    35641 ggcggtagcc ttcctcaata aaacgagcgg ctgtacccgt gtcgcccaac aaagcccaag
    35701 cctcgtcaat catcataatt ttgtactggc ttcgtgatag gtacatgccc tgcataatgc
    35761 ggtacataat cagctgcatg atgatctgtt gcagatccgg tttggttttt aactcttcaa
    35821 gttccagtac gaccaggtca tttttaaact cgacattcaa ttttccattg aagtaactgc
    35881 cgtagatacc ttccgaacag tatgtgtaca attggtcggc aacggccacc atagacaaat
    35941 ctcgttcacc gggctttcct ccttcattac tgccggtaat caaacacttg agacagcgtt
    36001 cccttacatg atcgaccgtg ccttcttgtc cgaattcgta ccatacttct tcgattatcc
    36061 gttgaagctt ggcttcctgc tgttccgtta gggagtctga cggagaggcc atcaatgaga
    36121 agattagttt caacatctca atatcttcgt tgatgtccgt taccatttgg aatggcggga
    36181 agcacaggcc tgcttcatag gtaaattcaa tatactgccc gccaatcatt tggcagaatt
    36241 tttcatacga acggccaacg tcgataatcc atacctgagt ccccagcccc atgtagttgc
    36301 gcacaatttc attggcaaaa aatgatttgc cggaaccgga agcgccaata atggcaaagt
    36361 tatagttacc tgccgggttg gcaaataagt cgattcccat ggcctgcccg cgttttccga
    36421 acaaaccgat gacaggtctt cctaaaccgt gccactcgcc gataacggga gacatacaga
    36481 cagcattagt catggttttg gttgaccatc ttttcttact gtccaaatat ttctcaacct
    36541 ctttgtcgat agccattggg agggcagtca aatatgaccc cagttgaaga tattggtcac
    36601 gataaagacc gaagccctga gcctgccaaa tcgataccgc ctggctttca gccaagttaa
    36661 tgttttcggg acgctcccaa atgacaactt ggtgcaacaa actcaccaga ccgccgccgc
    36721 ctttgccgaa cgcttctagg catatgtcgt aatcacgttt gatttttgct gcctccggca
    36781 taactgcggc catcttggat tccgccgttt gtttggcgcg ggccgctttc agttttacgg
    36841 tattgctgga agtgtcataa tcacgcttga acatcgccat ggaaatcaga aatggtgatg
    36901 tgtaattcat gtttgcctca atgacatcac caatcaatgc gcccatattg gacagatgaa
    36961 actcttcagg gtagcgattg gcagaatagc attgagcaat cacgcaatcc cccgcggcac
    37021 ggttgccaaa acgcagcccc gagccgctat caagaacctt gatagatgtg cgggtctcaa
    37081 tcatttgttc actcaagaac ttggtttcat cccaaacagg atcgatttca tcttgttgtc
    37141 cggtaaacat cctattaggg ttgagtagga gcgttgtcca agccaataaa tcgtctgcat
    37201 tccaagttcg gccgtaaatc tgcatggagc ggagtgaatc gcgcatgcgg gcaaggagcg
    37261 aaaccgcctt gctgacttcc actgcattat caggtggaat attcaaattt acgctgagga
    37321 tacagcgcag atttcgtaaa cgaatggccg tattttctac caagaccttc tgtgtaccct
    37381 tattccaaaa ttcagtacgt tttttggcca aagtttcgaa agtgcttcgc atcggatcgt
    37441 ctataggtcg tgatgcttgt acttgctcat attccttgaa gtaatttctt aaatcggggg
    37501 agccgaaaat ttgaacctgt atcggcgtct tttcaggaag cagcgcatac aggctgcccc
    37561 acttaccgat caggtcgtca ctgccgccta aaaatgggtt aagttccaga ataaagccca
    37621 tgcccaacgg tttgtcgcct ttaacggaca tcagcgtaaa caactctgtt ttggtatcgt
    37681 atgcaccgta attgagatag tcgctcaaat ggtcaaagtc aggatcgaca gggttgttgt
    37741 gcaaggcttc catcggttga tcgacatcat ccgaaccggc caaccaattt ttaaattttg
    37801 acaggacgcc cattacatac ctctatcgaa cggtaccggg aatacccgat gtttcctgca
    37861 gatgaagatt cacgccaaca tcggggatgc ggtcatttgt gttgtttgaa ttggttggag
    37921 aagtctcaac cgaactgcct gaagttttgg ccccatcccc caataagcgg atgggacgat
    37981 attcatttat aatctgttgc ccgttgtggg caattaacca atcaccctga ttcagaacga
    38041 catatgtgaa actttggtca tttaaatcgc cgtccgtatc aagataggga gcgacccaaa
    38101 tgcgagcaat ttcactttgc gagcgaacgg gcgtaccgga ggaataagct tgcgttaaca
    38161 ttaatgtgcg aacactttga tcagtgtaag gttgtccaac ctgtcttttc ataccgtctt
    38221 ttaaaacacc tgcaacagat gctttatagt tactgcttat agattcacaa taaggatcgt
    38281 cactgttccg ggcattaggg catcggaatt tttcactacc gccgataccg gacatggtta
    38341 aggttgaaca tccgctaaga atcaatattg ccgcagtaat cgataaggct ttcaaacgca
    38401 tcattctgct cccgctccat ttaaccattt ttccaattcg gcacgcggca tggcaccgga
    38461 tgtacgccga ccatctttat gaatcatgct tggagtaccg cgaactttaa gctgctctgc
    38521 gagtgcaata ttttctgata cagggttttt acagttaccg gccgccggtt ctttatccat
    38581 cagcatgtag ttattccatg ctttttcacg atctttactg caccagatat gttctgcttt
    38641 tgaaattgca tcagggtgga gggatttaat cgggaacatg aaaacgtatg cggtatagtc
    38701 tgtcatgccg gccaatgttt cttccaaacg acgacagaac gggcaatccg ggtcggaaaa
    38761 aagtgcaaat tctcgcttgc ctttgccgcc attaccttta acgattttga tggcgttttt
    38821 gaatggcagt cgggaataac tcttttgtgt taccgctgaa cgggccatct cggtcaagtc
    38881 tttctgctct tgcatatcgt acaacgcgcc aaaaatgaaa tagcgaccgt tttcttgtac
    38941 ataggcaatg ttgtcaccca ttgtcacttc ataaattgaa gccatggggg tagcctttac
    39001 tgaagaaaac gtggtattcg gatacaactt gtgcagagtg cttccaacag ttttgacatc
    39061 ggcaaaggcc gtctgaaaag ctgtgattgc tgcaatagtg gccaagattt tctttttcat
    39121 agatggatcc tatttggttt cgccggtatc aatttcgata ccttgagtca gtacgacatc
    39181 gacttgacgg cctgcattga cttcaactac cgggaagacc ttatcggcca gttttatgta
    39241 atactcagca agcctgtcag ctgcaccacc gataccagat gcaatccctg cacgatattg
    39301 atcactgccc cgaatagagg ttgtgctgcc aaatgcggta ttattcgtca ccttgaatgc
    39361 ttccgatacg cccttaccca taccgctaat cacgccggac atcagtgcat ttgccaagag
    39421 ttggccttgt ttcgttacaa gattacctct cacgcctgtt ttgccgtctt caccggcaac
    39481 gtaacctttt accggcatgt cgatggctcg gccatcggta cctacacagc tgagattctg
    39541 cagtctgatg taagcgcgtt ctgaagatat atcgccgtaa gcctgcccgg ttacgaaaca
    39601 ttctctgaaa ttgtatttaa accggttggg aagttgcgca aaatccgtta cgcgcattaa
    39661 aacagggtgg gggctggcat tttgtgcctc acccccggtc ggtgcgtcaa ccccacctaa
    39721 cagtacggat cggaaaaaag taccgctagg tatatacgag tcacgcgccc gaaacttgcc
    39781 ttgcgagacg acaaccttac cgccgtcttc aactacttct atattcatac gcggggtttt
    39841 tgatttaacc cactccgctt cttttaattg cggggaaacc cgtacatttt cattcggatt
    39901 tccggtattt accgatccgg tcgttccagg ttgcagctct gcttcactca tacttcctga
    39961 aacgattttc cgttcaatgg acctatctgc cggaggcgcc ccgttcggca atgtgcctgc
    40021 cggaggggcc ggaggaagcc ggccgttatc cccgataccg ctaattgcag gcggtttgcc
    40081 taatccatca ggccccagcc ccttacttgt atcaggatta ctgctgttct ctttttcttt
    40141 taactcctga accatggttt ccaattcgct gatttttcga tttgcatatt caatcttcga
    40201 actttctgtg ttcatccata aggaattgtc cgtaatgcct gcttgggggc ttgtaaaatc
    40261 agttctgaga atctgccgtt tgttttgaac ctgtgtgact tcggcagatt tctttttatt
    40321 gccttcaatg acataaattg cactgcccac aatcgccgcc atgctgcccg caaccatgcc
    40381 cgcaatggct aactggcgtt ttcgcgctgc tgaaagttta aatttgttta ctttcaccct
    40441 catctcaacc tcccggacgg ctgataataa atacgtcggt aatttccccg ggttgtagga
    40501 tctgtttccg aaccgctacc gccaaaactc cttgtcggta aaattcctgc tctctaattt
    40561 caagttgttt agtacctaaa ttagttaatg taaaagaaag gccttgcata tcagcggcgg
    40621 tgtaacttcc gttttgaata aagagggtgt ctttccataa tgggacggtt tgatattcat
    40681 gactatgatt gatgcccata tcgccggtag tgccacgcat catagaggcc atcatttttt
    40741 tgatggcccg tacatattct gtactattca tcgttacagg cattggaccg gtttgcgaag
    40801 ccaatactgc tgcttcacgg cgattagctc cagccacatc gattacgatg ttgtcaccct
    40861 gttttgatgt aggtttaaga accagcaaat aggtcttacc ttcttcgctt ataacgaaaa
    40921 gatttgtcgg attggaggtc aaactacgga caaacagttg gcctgttgtt gtatctttct
    40981 gaagctcaag atcaccctcc ataaatttcc atgatgaaat tcgaccgcct tcaatggcga
    41041 ttctgctcaa gttccgttta cttattgaaa caacgtgagg tgtattttct gttgccggca
    41101 ctcgttgcgc tgcaaaacta gtcgcgggtc cggctgccaa caaggcagaa aagacaattt
    41161 tttttaacag tgaacacata tcaattacct cgattaccgc ctttaaattc tgttgccgtt
    41221 ttactgattt ctacatcctc ggtttcaact tcggattttt cctgacctgc gggttctgct
    41281 ttagttacac gcttttgaac ttctttaatc gataataatt gcagtgttcc ataattattt
    41341 ttgaaagaaa taagtagctc gcggtctttt tgctctacca gggcattgtt gcgtttaacc
    41401 tcaaaaaccc cacgaatgga aactgtattg tctgaaatgt ccgccgttgc ttctgtcgcg
    41461 ctaaaagtgg tgccgacatt atttttctta acccataagg catttaaaga cagctccctc
    41521 tctagggcat ctttataatc aggtgaaaca atcttcaata attgactatt ctgataatcg
    41581 actgttttag gggttacatt taagagaaga taggcagcat agggagccat ttcttcaaga
    41641 tattctttag aaaaagcgat gtttgataca gtcattgacc gccagatttc cggcggggtc
    41701 agcgtcgttt gaacaatcgt acctttgaag agcagggtcg cggacaaaaa tagattgaca
    41761 gctatagaca ttcccaaaag tatccaaaaa aagaccttta tgccggttct tatcgccaat
    41821 tcactcaaca tatcttcagt cttcaattta gaaactcccg tttattcgtt tcaggtatcc
    41881 gtttgttttt ttcattaatg ggtaagtacc agtaaagaac atgcaaaaaa aaccattgat
    41941 gcttgccaga cttaagcttg ccccacctcc atgcaatgaa aaggctaatt gacatggaaa
    42001 tgaaaaagtg acgagagaca atacctatac cgaagccgga cataaataat ataaaaacgt
    42061 ccaagtccca aataaatgcc tttttgggat cgtctatcga taccggcaca tgataatctc
    42121 tcatcacttc tcttatctag tttgattaaa taatcaaggt aaacatacct ttaatgatgc
    42181 ccgggcctaa tgttgcggcc aagccaacac ccaaaccgac gatacatggc atgatggttt
    42241 gtttcatcag gcctaccgcc aaaccgatca agaatgcagt caagcccaaa gccataccca
    42301 gataaccttc agaccagcct gttaccatgt cagccaagcc tttgaattcg gcacctgttg
    42361 tagcggccat tgccaagtta gcatacaatg ccaatgcaac cgcactagcg gactttacta
    42421 atttattgcg tttgatattc attatgaacc tcattaaaca gagcttatat cgccaagctt
    42481 ttgcgtccga tcattcttta ccaagtgatt acaacggttc tcgtatcatc actattgcag
    42541 caggccgggg aacttgctgt tcttattttt gcggatacat tatgtttcct cagccattta
    42601 cctattactg ctgcccgttg tttagccaaa cgtctattaa ttgcagtatt tcgacctccg
    42661 atactgtcgg cccatccgcg taaataaacc gtctgagtat ttttcaattt aggcagaaca
    42721 cgtttgagcg ttctcacgcc ctccgcaccg aggtgcgaac tgcctaaatt gaaaaacacc
    42781 ctgatctcat ctttttgaag attggtttgt gtttgagcat aaaccggttg ttccgccaaa
    42841 accttgcgct caaatcccga acactcttca ttgcggcaga agacaaattc gcccagctga
    42901 ttttgttcca ctgtataagt tgcgtcttga ggcagcccgg ccacttcctg ttttggggcg
    42961 gcacaggctg tcagaatcat tgcggaggct acgaagagcg tgtttttaat cgtttccaat
    43021 tttgatatac cttatttgcg taagtcattc ttgcgcgata gcacgcccgg cctttaagtt
    43081 tggtacatgc ggcgttataa gcaccaactg cttcccatga tttcccatgt tgccgataac
    43141 tatttgccaa tatccatgca ccaatatgta catttgtgca tggattccat acatccgccc
    43201 ctgttaaacc aaatttcttg tggagtacgg gtagccatga acggttgata cccatcaagc
    43261 caatatcagc tgtatgactt tcaatattcg gcctgaaagc gctctcggtt aatgcgatcg
    43321 attgcaacat ggcgggatcg atgccatatt tgctgccggc ttccttataa caaaaagcaa
    43381 ctgctcttgc agatgtgagt accaaaacac ccggtacgac gaactgtaaa agtatggccc
    43441 ttaatctcat gtcttta
//
LOCUS       DAXGCP010000005        42936 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.005, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000005 DAXGCP010000000
VERSION     DAXGCP010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 42936)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42936)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42936
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.005"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(121..1038)
                     /locus_tag="ACFJCW_000218"
     CDS             complement(121..1038)
                     /locus_tag="ACFJCW_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC4150468.1"
                     /translation="MNNSNLGLENIGNLSELLGNAEVSSGTPLRLPLASIKEDPDQPR
                     KEFDEGKIQELANSIQERGVKTPISVRQSSEEGVYVINHGARRYRASLLAGLSEIPAY
                     IDQDYSLIDQAVENIQRDNLTPREIADVIGRLLAEGMKKGQIAEKMGKSPAFVTQHAN
                     LLDLPEPLANAFNSGKVSDLTVINDLNALYKKEPEAVEDLLSNEDEITRSSVRNLKEF
                     LNSDPKNSADADHEKPSKAKVKEKKPEDPDKLKKAIVQVMYQGQLARLVLNKRGLSGD
                     EVWIKFEESGETESVPCKEISGIVAVIEG"
     gene            complement(1044..1799)
                     /locus_tag="ACFJCW_000219"
     CDS             complement(1044..1799)
                     /locus_tag="ACFJCW_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC4150469.1"
                     /translation="MKILVVANQKGGVGKTAMSLHLAWHMETVGLRVLVIDLDTQGNA
                     SYSLRDKTCLFGSGRLFGNMEDADLHMPGNVSLALSPATNDLANVQNMTLQNAVQSFT
                     QNIDKLKAGGQFDVCIIDTPPSLGNTLAAALAAGDYVLCPIELETYSLQGIKQMAATI
                     GNIRKVNSKLAFLGILPSKVDMRNPRHKRHLEEIKMQYNEIVIPHIIGLRSSIADALS
                     SSLPVWKIKKTAARKAAQEMKAVSNYVLNKMQG"
     gene            complement(1809..2054)
                     /locus_tag="ACFJCW_000220"
     CDS             complement(1809..2054)
                     /locus_tag="ACFJCW_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150470.1"
                     /translation="MDRIKSKAGKKMFEVVYMVLAIAYLLFPVRWFAWMYSFYVLCQM
                     LYHWNMADSWIYIGKFILTFGIVMGWLTFVIAFRNKI"
     gene            complement(2135..2482)
                     /locus_tag="ACFJCW_000221"
     CDS             complement(2135..2482)
                     /locus_tag="ACFJCW_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150471.1"
                     /translation="MTDLISTTVLLTPYQAFQAKKWHLQNIEEHNLIQKKDLNIRPEC
                     FHRFPQWAVPTADEVKELWLATGMTQKQVSRYLGLKDTNGRAFRRFISGESSITYAYW
                     VLLSLYVGIEKFW"
     gene            complement(3059..3937)
                     /gene="trfA"
                     /locus_tag="ACFJCW_000222"
     CDS             complement(3059..3937)
                     /gene="trfA"
                     /locus_tag="ACFJCW_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiator TrfA"
                     /protein_id="HFC4150472.1"
                     /translation="MKNVQEVLPYLNLVAERRDEAQREEYLKSKGIPTDDNLIIEDLF
                     GNTIFGSKHRAMPNDFARSCLFTARNHRVPRKTFSREKLFHISEKVEILYTGTELRSV
                     DDELIWMQLVDYCRRFPLGNYVEFDIRQLIKDIGWDTSGAYYKRVRESLSRMKATEIY
                     IKNGNTYGVSGGISLIDNYVGIENIKGEPTRYKVSIDKKLIVLFAGNTFSNIPWSQYK
                     KLSPMARRLTDYVFSHKHPNPIPIPAFLAMCGSDQINSPAKTQNQNAKKICAELTEAQ
                     LVKTAFVLSGKIIVER"
     gene            complement(3941..4324)
                     /locus_tag="ACFJCW_000223"
     CDS             complement(3941..4324)
                     /locus_tag="ACFJCW_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC4150473.1"
                     /translation="MNKFIISGRTTKDLTLEQTATGVFTTSIPLAENYFYTKDGKKVE
                     ATNYFWIDVYGEQAKNAVRYCGKGSLILIEGRISNNNYEKDGQKIYKDQMIASRIEYS
                     NLKPPAGREESSDPSFIYDPEQDLG"
     gene            4384..4749
                     /locus_tag="ACFJCW_000224"
     CDS             4384..4749
                     /locus_tag="ACFJCW_000224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFC4150474.1"
                     /translation="MSYSKIFFTNVLRLASEKNLSHQDLAERANLSPSSMSGITRGQG
                     NPTLETMSAIAYALDVPLSYLLEHHDLDPESLSLLDGSQSTLPPNYEKITVILPRYKA
                     FQVKKWNDDALKILAKETK"
     gene            4877..5875
                     /gene="trbB"
                     /locus_tag="ACFJCW_000225"
     CDS             4877..5875
                     /gene="trbB"
                     /locus_tag="ACFJCW_000225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer ATPase TrbB"
                     /protein_id="HFC4150475.1"
                     /translation="MMETTETADSRKERALNKLKRDLGNEFLEKFMNPNLVEVMFNPK
                     QTGNGVSVYWEEQGKEMVYDERLSDWFKTSRVEAVIKTVAGYHGKVITEDLPILESQF
                     PIDGSRFTAILPPVTASPSFTIRKKPARVFTLDEYVSAGIMTESQRQTIRNAVSEHGN
                     ILVIGGTGSGKTTLINAILYDMSEQNPNERLYISEDTGEIQCHSQNKVQVYTTGSIDL
                     TKLVKTALRYRPDRIIVGEVRGAEALDLLDIWNTGHPGGIATLHANNAALGLERLESL
                     ITRNPAHPAAIRPLVAQVIHYIVSIGKDEKTGRKIREIIKIKGLDEKSGNYVFDYL"
     gene            5977..6360
                     /gene="trbC"
                     /locus_tag="ACFJCW_000226"
     CDS             5977..6360
                     /gene="trbC"
                     /locus_tag="ACFJCW_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer system pilin TrbC"
                     /protein_id="HFC4150476.1"
                     /translation="MTLSQSQQKWLFFIGLAVFLLLMSSPALASQGQGGGLPYESWLN
                     NLRQSVTGPVAFALSIIGIVVAGGVLIFGGELNAFFRTLIFLVLVMALLVGAQNMMSS
                     FFGGAEVTAAVQAAQHYLLPLASKG"
     gene            6365..6682
                     /gene="trbD"
                     /locus_tag="ACFJCW_000227"
     CDS             6365..6682
                     /gene="trbD"
                     /locus_tag="ACFJCW_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010676131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbD"
                     /protein_id="HFC4150477.1"
                     /translation="MRAIRTIPIRRVANRPNLFWGGDREMVQVSLLITFVLVVAAQNT
                     YAFVIGLVFWFFALYALRKLAKYDPLLRFVGLRSITKYKRFYPPHSTPFRNNTSTQGN
                     RYK"
     gene            6679..9243
                     /locus_tag="ACFJCW_000228"
     CDS             6679..9243
                     /locus_tag="ACFJCW_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VirB4 family type IV secretion/conjugal transfer
                     ATPase"
                     /protein_id="HFC4150478.1"
                     /translation="MIIGIISAISVLGLVLCTGLFLKIRAVTNATKLKQHRSKEEGLA
                     DLLNYAAVIDDGVILGKNGSLMAAWIYRGKDMGSSTVAEREDVSLRINQAFVGLGSGW
                     MVHVDAARRPAPNYTEAGRNYFDSYVTEAIDNERRQAFEAIGTLYEGFFVIVATYFPP
                     LLAEKKVAELMFDDDNAKEGKRAQQDRTLSHFKQACANLESNLSISLELHRLCAHKVV
                     LEDGMEITQDDFLRWLHFCITGKNHPINLPAAPMYIDSLIGGQELYTGVVPMIGDKFI
                     QVVALDGFPMESYPGILTRLGEMPIEYRWSNRFIFMDQHQAVADLEKYRKKWKQKVRG
                     FFDQVFNTHSGSIDQDAQAMVDDAEAALAETKSGLVAQGYYTSVVILMHEDRAFLESM
                     ARQVEKEINTLGFNARVETVNTMEAWLGSLPGHGIENVRRPLLNTLNFADMIPTSSIW
                     TGLEENPCQFYPPNSPPLMQVVTSGSSPFRLGLHVGDVGHTLVFGPTGAGKSTLLATL
                     AAQVDRYRNMRVFSFDKGRSLETLTRAVGGSHYNIGDEDNTASGLSFAPMQLIQNTSD
                     RAWALSWVEAVMELNGLKVTPQQRNEIETAIKNNAAEQSYSLSDLSNTLQDVEMREVL
                     KAYTIDGSMGYLLDAEQDSLSFSRFTCFEIEELMNLPEKYALPIMLYLFRRIEKALTG
                     DPAVLFLDEAWIMLGHPVFREKIREWLKVLRKKNCLVLLATQSLSDAANSGILDVLNE
                     SCPTKIYLPNAHAREEDASELYRRMGLNARQIEILATAIPKRQYYYTSPYGRRLFELA
                     LDPLTLAFVAVSDPDTLNAMRQTADQYGEDWPIRWLQNRGINIHNYVDVDKYRRKH"
     gene            9243..9950
                     /locus_tag="ACFJCW_000229"
     CDS             9243..9950
                     /locus_tag="ACFJCW_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VirB8/TrbF family protein"
                     /protein_id="HFC4150479.1"
                     /translation="MGLKDIFRGREKADREMTENPYLNARKQWNFIMGDMVSSRLLWQ
                     WAGMTGLLIGLGGVGGMIYLGSQSKFIPYIVEVNKLGETVAVARADQPQATDERIVRA
                     MLGSFIGNARTVTTDIALQRKYVLNTYAMLNPKDAAAAKMNEWLNGTPESSPFKRAEK
                     ELVSVEIKSVLRQSDNSWQVYWVETTRAHDGKLLKPPQNMRALLNIYYVPPTTEQQII
                     VNPIGMFIRDFSWSNEL"
     gene            9963..10829
                     /gene="trbG"
                     /locus_tag="ACFJCW_000230"
     CDS             9963..10829
                     /gene="trbG"
                     /locus_tag="ACFJCW_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbG"
                     /protein_id="HFC4150480.1"
                     /translation="MKRQILSLALITALSTSAFADSYADKYFEGSHNPKLNRHEQKGL
                     GIAKNYSSDGRMAVPPVPGDNGRITFAFGSDPSVVCAVMQVCDIALQPGEMINDLHAG
                     DTARWNITPAISGSNGNERMHILVKPLDVGLQTTLFIATDRRTYHIRLKSHRTRYMPA
                     VGFSYPEDTAARWRAIRANQARQAEAQVLPTGENIQNLDFNYTISGHNPSWKPLRVYN
                     DGTRTIIQMPPTLSQGEAPALLVVRNGENTLVNYRLHEDRYIVDSLFDEAIMITGVGR
                     HQTKVVIRRSRS"
     gene            10826..11236
                     /locus_tag="ACFJCW_000231"
     CDS             10826..11236
                     /locus_tag="ACFJCW_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbH"
                     /protein_id="HFC4150481.1"
                     /translation="MKSNVLFVALALAVGGCATGQYGSFVRSDAVSASVTQDVVEKLQ
                     EEFPAANTVFFLNRSKSDTFGTQLDQALREKGFATTAQQGENEKSLNYVLDQVDSDIY
                     RVMIYIDGTPYSRAYRQTENGAVVPTGSWTKRGD"
     gene            11240..12679
                     /locus_tag="ACFJCW_000232"
     CDS             11240..12679
                     /locus_tag="ACFJCW_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbI/VirB10 family protein"
                     /protein_id="HFC4150482.1"
                     /translation="MSQSTEDLLNASRSPSIAPDTSGRRPGVRRLNNIPIYIVGGVVL
                     GFALLIALVAATKGQQSAGQATQGDGKDATRMADSLLNELPQEGGLITAKASEPAMPA
                     LPDGMASAPDLPASAPTSLPMVPDMANLPATPPEVDQEAEQIRQAKAQMFQAALAAPT
                     KVDVVASTSRGSSGLYTAALSSSGSGTPNRSEMLAQIAEVQRMSENAGSNPAEVERVY
                     NQQLTNAQQMAAAGGQDGVQGAGGMPGLNTPPTPGNIPRQTAQNGGNNWRLESQVERP
                     NAYMIRSGAVIPATLISGINSDLPGMVQAQISQNVYDTATGRHLLLPQGSRLVGTYSS
                     GINLGQRRLFIAWNRIIFPDGKALDIGDMPGASGAGYAGFSDRINNHYGRLWGNALML
                     SLVGASITYGVDKNSNNNNNGNNNGNNSTVRGALSESLGQTFGQAVSQSIQKNMNVSP
                     TLEIRPGYRFNVILTKDIDFSKPYRSFDY"
     gene            12692..13468
                     /gene="trbJ"
                     /locus_tag="ACFJCW_000233"
     CDS             12692..13468
                     /gene="trbJ"
                     /locus_tag="ACFJCW_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbJ"
                     /protein_id="HFC4150483.1"
                     /translation="MQKRLLSKTKTVALSLAVSVSLGLSAPAYAGIPVTDGGNIAQSS
                     VSAIQNVAQTLKQIEEYRIQLKQYETQLRNSLAPAAYVWDQANKTMANMKAAVARLRA
                     YKQQLGNMEEYLSKFQAVDFYKSSPCFTAKGCSAADRAKLEQNYAQLSRMQKLSNDGL
                     LRSINNEIDSISRDANTLTQLQRNAQSATGQLEALQYANQFHSAQAHQLLQLRNMINT
                     EMQANAAYRQSQLDREARYEAARKQVRTSDILKHPYRRGQ"
     gene            13703..15310
                     /gene="trbL"
                     /locus_tag="ACFJCW_000234"
     CDS             13703..15310
                     /gene="trbL"
                     /locus_tag="ACFJCW_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009291 - unidirectional conjugation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-type conjugative transfer protein TrbL"
                     /protein_id="HFC4150484.1"
                     /translation="MKKKYIYYFIFFITLSMPIISHAAGQGGVLDEALSRYEGKIGAW
                     EAAFYKAGLFIFWSLSSISIVMTGAQLIFQRDNISSFFAEFTRLILFLGFFLWIITNG
                     IKIATSIKDGLMKLAGQASGNGEQITPSSIVDIGFNLFDKIVENSSIWDPIDSATLIV
                     IGLVILLILAAVGINMLLMLITTYIVIYSGIIILGFGSGRWTSDMAVGYLKQVLNLSL
                     QLAAMILIIGIGQSIVQDTINTIGTPGFRELAVVLVQTALLVGLVVKIPPMIGSLAGG
                     AGSGGIGSFGVGNAIAAAAMLAGAAAGAGAALKSLAVEAGGLKKAFEAAKAGLGGSNG
                     SSDSGSGKMDSAVDAVAGANAGDKSNQDGKPLTAESSGNSENGSEGSTTGNSGGNPSG
                     SSEENTISSGSSSSSGEANSTNTSASSGAEGSAEGEATSSETSQSASDSPSNNSGEAT
                     QTADTTPKTTNTGGGSPLATAMGGNKVSNWQAAKNVAVGLVSSKWNNAVNNSAGGRLV
                     KHWEDEKKKTEDPTKNPQKNPEGDDNA"
     gene            15303..15875
                     /locus_tag="ACFJCW_000235"
     CDS             15303..15875
                     /locus_tag="ACFJCW_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrbM/KikA/MpfK family conjugal transfer protein"
                     /protein_id="HFC4150485.1"
                     /translation="MLKKTLICILLVGSVHFAMAESLNDALNRSRSGNSNNNRPQVED
                     LFTGDVKLACEATLCLSTGNRPSECQPAIHRYFSIRHKRMGDTIRARHNFLRLCPASK
                     EQGMPELVNAIANGAGRCDARELNRINRSTYIKRVWVGSRRHGDWQEVKVPYIRNAKP
                     SYCSAYFENGWTQLGTRYVGEEKNGGKWVD"
     gene            15875..16474
                     /locus_tag="ACFJCW_000236"
     CDS             15875..16474
                     /locus_tag="ACFJCW_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TrbN"
                     /protein_id="HFC4150486.1"
                     /translation="MVYVADLPPFMQERVTCSIAAAEKYHLPPHYLLAVAERENGRPG
                     QQVRNTNGTYDVGAMQINTAYIRTLSRYGVTQSAVAQPGCYAYYLAAWRIKRHIVYDR
                     KGDIWTKIANYHSYTPKYNAIYRAAIIRLAEKWERWLAGRQWNNAKGNTSTQAVSAVR
                     TIRPQPLPKQYVSPTTVYVPRTIRVVERSPEPEPETVQN"
     gene            16729..17016
                     /locus_tag="ACFJCW_000237"
     CDS             16729..17016
                     /locus_tag="ACFJCW_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HFC4150487.1"
                     /translation="MAYAIAFDLDTTVLQELYPNKRSWQNAYGDVKKTLVGLGFNHQQ
                     GSVYFGGSGVTAVSCVLAAQKLSQTYAWFKPAVSDIRMLRIEEMNDLQPAL"
     gene            complement(17105..17659)
                     /locus_tag="ACFJCW_000238"
     CDS             complement(17105..17659)
                     /locus_tag="ACFJCW_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000150 - DNA strand exchange activity
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HFC4150488.1"
                     /translation="MIIGYLRVSTKEQNVAAQRQVIQDKYQIERWYEDQAASGAVKAL
                     NRPEFRKMAEFVRQGDTVVVVAIDRLGRNTIDVLETVQFLQKKGVAVTSLRENFDLAS
                     PLGTAMLAIVSAFAELERSYIKERQMAGIRNAREEGKKLGRKVKVDPEEIRRWRQSEQ
                     TSISRTAAHFNVSESTVKRACKAK"
     gene            complement(17711..18142)
                     /locus_tag="ACFJCW_000239"
     CDS             complement(17711..18142)
                     /locus_tag="ACFJCW_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HFC4150489.1"
                     /translation="MKEKMRLITEISLIIRELSYSRRGYRPESYAAALDNLTIIGDLA
                     DILHNIEAATGNPFVQRMVDEKLRKFVTDFPAYKVRLSPFLNGCPHDLSLGAESLGKG
                     ESIADALAVPPEEVDIADIEFDRVLIEDDRWTGAYDGGNAQ"
     gene            complement(18157..19362)
                     /locus_tag="ACFJCW_000240"
     CDS             complement(18157..19362)
                     /locus_tag="ACFJCW_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HFC4150490.1"
                     /translation="MVKLSSDINLRDFGNNEYLSSVQDEAIRFATEQTDEILSLYSQH
                     ADTEGGRYVCADTFKELFPAFENKEDRATVNNAIHNSAAVLSSTQFDEVLKRDEPQKK
                     EVIFVTGIPGSGKTSTVKNMMMQDTTKLLFEGQLARPQSAFRKIEQCLDRGLEVIIVA
                     VSMRAERASDNTYKRFNEYGRGASIGIMADIQANLPNGLSQIRDKFGDAVKIVGINQD
                     RNSEFIDKFDDVIKMLSLGSQEQILGRLAEKIQGDFDSGKISRECFNQAKGSMDLESI
                     FAKKEYSKQRVVTNSKGVTLETKSANELWSKGEQIPVTGMKAGIYLLGQAKKAETGQT
                     YSGEIIYKDAAAVFQKTKNGLVRHNATHNEERLAKLVEIGQNVSIGSNKGKLIVKSLE
                     YSAKKSISR"
     gene            complement(19369..19554)
                     /locus_tag="ACFJCW_000241"
     CDS             complement(19369..19554)
                     /locus_tag="ACFJCW_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150491.1"
                     /translation="MNKVEPQESNAIRMIKEACEKNRRMMTDEAFRKEVEKRLYAGPS
                     PELLAKLRVLWAANKEQ"
     gene            complement(19588..20796)
                     /locus_tag="ACFJCW_000242"
     CDS             complement(19588..20796)
                     /locus_tag="ACFJCW_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HFC4150492.1"
                     /translation="MIEYTPLSAEGKARILNGFMKPRLSRTQSVEQPKIVLVGAQPGA
                     GKSKAASLAKSELRQEGGYIHVDADIMRALIPAPEGVVYSSEQTQKDAGALAISVRNS
                     AKENRRNIVEEGTFRNAASISQFIRDRKSEGYGVEMLAVATASEESVAGIFKRYEEQH
                     AKGVSQPRFVEESYHNEAMAGFKDTLSQCESSFDRVRVTNRAGDILYDSLNRRQNQYE
                     TAKDALSAYQEITPKRLKQVVKAWDEIQLQAESRSIDPIPNYLGMVKQHSEAIYQRVE
                     EIYRQERVVANSEGATLQRKSGDTWQDIEKAEAKGMKAGIHMLGTAKPAKSGREYSGE
                     IVHKDEASVFQKTDQGLIRHKAVQGMAEGKFSSLSEQVEIGQKVSIKREGNELSVKPA
                     DASLKKTMKR"
     gene            complement(20793..21047)
                     /locus_tag="ACFJCW_000243"
     CDS             complement(20793..21047)
                     /locus_tag="ACFJCW_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150493.1"
                     /translation="MQMQETIPGINYEVALELLGDSMRPLIQARESEFVKDKPNQAFI
                     EYCTARLEAIDMLRDSLSPEDTDIIARIFNPDDQTVGRVK"
     gene            complement(21424..21939)
                     /locus_tag="ACFJCW_000244"
     CDS             complement(21424..21939)
                     /locus_tag="ACFJCW_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150494.1"
                     /translation="MKTVQEYEIIIRLTKENGRYGAAAETVSGGLLESVPPLSAAGSD
                     ALYALLHALALKNNFSGCLKEAERQESVKNIEAKIEEKMKPIELQYYSSDMSVGEFNA
                     YLTVKNLAKPTFISHVDIDEDDKMFIANLAKSIASEYKSLFHLDVNRQTIEKALLRYL
                     EVCVSCNSAQD"
     gene            22334..22450
                     /locus_tag="ACFJCW_000245"
     CDS             22334..22450
                     /locus_tag="ACFJCW_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001814923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance determinant leader
                     peptide"
                     /protein_id="HFC4150495.1"
                     /translation="MILKYPENICMLCIPMVMHKNPSDKSIYHWDFYALLGF"
     gene            22466..24385
                     /gene="tet(M)"
                     /locus_tag="ACFJCW_000246"
     CDS             22466..24385
                     /gene="tet(M)"
                     /locus_tag="ACFJCW_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(M)"
                     /protein_id="HFC4150496.1"
                     /translation="MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTD
                     NTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVEL
                     YPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYH
                     GSAKSNIGIDNLIEVITNKFYSSTHRGPSELCGKVFKIEYSEKRQRLAYIRLYSGVLH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLG
                     KVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVS
                     PLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYS
                     PVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYTDAPKYCANIV
                     DTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRP
                     NSRIDKVRYMFNKIT"
     gene            24504..24671
                     /locus_tag="ACFJCW_000247"
     CDS             24504..24671
                     /locus_tag="ACFJCW_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002319681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HFC4150497.1"
                     /translation="MCPVCGNKTRLKIREDTELKKFPLYCPKCRQENLIEIKQFKVTV
                     ITEPDAKTQSR"
     gene            complement(24731..25084)
                     /locus_tag="ACFJCW_000248"
     CDS             complement(24731..25084)
                     /locus_tag="ACFJCW_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001227347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC4150498.1"
                     /translation="MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTN
                     IENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLM
                     ESLASGINEARNIED"
     gene            25365..25838
                     /locus_tag="ACFJCW_000249"
     CDS             25365..25838
                     /locus_tag="ACFJCW_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150499.1"
                     /translation="MPHEQMIDAFSAVIQNSLSLYEEQTPIYYYLTICGSWVLTALGI
                     LSLVSVFFTIKQKKPYRFIVPILFLWLGYESIHMPRPNLAVFYGYNLAQLSYPANENP
                     NSFLHLTDGSNPICCFIGEDEYLQAKRLGFKEYADAKAKALVDLIEMEKKSKQSD"
     gene            complement(25990..26886)
                     /locus_tag="ACFJCW_000250"
     CDS             complement(25990..26886)
                     /locus_tag="ACFJCW_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine modification methylase"
                     /protein_id="HFC4150500.1"
                     /translation="MFTHSVCSYPQRGNYGKSGYRGNCTGHIIRDFVESYLAPEGLFA
                     DPSIGSGTSSDVAEEMGIRFKGTDLHQGYNLLTQDFAAFLGEQANLIWWHPPYWNMIR
                     YSGNQWGDAANPWDLSQMDLEQFQEAMLLAMMNIHDATEQGGHYGILMGNMRKDGRYY
                     NLSSMVERMAAGRLVDEIIKIQHNCVSDSRQYGGKLVRIAHEKLLVFKKEIQTALYFL
                     AKAMNRVEAVTAVTWKAAVRRVLQAADGRDMGLMEIYGEMEPYAAARAENRNWQAKVR
                     QVLQDERFFLRVGKGIYALKTE"
     gene            complement(26890..27231)
                     /locus_tag="ACFJCW_000251"
     CDS             complement(26890..27231)
                     /locus_tag="ACFJCW_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150501.1"
                     /translation="MLYWDDVSDSFDGWMNLLRQLGGDSFINFEQDIWETARTYETVP
                     HFGNLRQHHLLERLQDTIRNRWPFLRTGFLINALDTHFYVNDELVETMRDLDAVLGCH
                     YRENEDDLKEE"
     gene            complement(27245..27559)
                     /locus_tag="ACFJCW_000252"
     CDS             complement(27245..27559)
                     /locus_tag="ACFJCW_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150502.1"
                     /translation="MASYTNRLTRHPNVFVEQNIWSNGELMGFSPINVMWNGRNAPTL
                     LCRYTFDGGQYYSLQVSEAAELETRGYQIVCDDLQCLKLKTAKARRSGILALILADAG
                     IE"
     gene            complement(27926..28285)
                     /locus_tag="ACFJCW_000253"
     CDS             complement(27926..28285)
                     /locus_tag="ACFJCW_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150503.1"
                     /translation="MSLSAENRTFYLVETGEIGYGSSALFISQSLEEAEAVVADFFKG
                     DEKLYYETDGNQPEISLGMGETQEEEYIPFLPKEPFVWTKGGSGMMGTEYVTIRKTIN
                     GYLEGAGSFRLIKSQQD"
     gene            complement(28282..28716)
                     /locus_tag="ACFJCW_000254"
     CDS             complement(28282..28716)
                     /locus_tag="ACFJCW_000254"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HFC4150504.1"
                     /translation="MSIYRPASRERKNIKFFADGQYIQEGYKALCWMMRDVVDNHQMH
                     AININLINLLFAQQQYLRDLGRPNPELVLHSGFRTRRHNDSLEGAAKNSQHLSGNAGD
                     FHIERASLSELAALARRFRVGGIGIYSTFIHNDIGVYREWRK"
     gene            complement(28789..28842)
                     /locus_tag="ACFJCW_000255"
                     /pseudo
     CDS             complement(28789..28842)
                     /locus_tag="ACFJCW_000255"
                     /inference="COORDINATES: protein motif:HMM:TIGR01409.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation signal
                     domain-containing protein"
     gene            complement(28839..29333)
                     /locus_tag="ACFJCW_000256"
     CDS             complement(28839..29333)
                     /locus_tag="ACFJCW_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor"
                     /protein_id="HFC4150505.1"
                     /translation="MDKDKLYRVAFFLTYHKQAREGWFWRVFGMAFDGRLRQTLQNIA
                     VDYRKTSQNQPLAFDDYLEMLLRHEEEKTGMSAERNQSEQAAVKAFQKQYGLDRRAGT
                     HAGTKTLSITITAADDDFLPAVEMGLEQVLKSLSAGETANEGGNEYGRYAFMVSGNVK
                     GRER"
     gene            complement(29342..32341)
                     /locus_tag="ACFJCW_000257"
     CDS             complement(29342..32341)
                     /locus_tag="ACFJCW_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5710 domain-containing protein"
                     /protein_id="HFC4150506.1"
                     /translation="MQNKKPFYEQVAEKLIEQLRQGTAPWQKPWDGGGLPDFMPHNAI
                     TGRRYRGINNLWLQAQGRKDPRWITYKQASSIGAQVRRGEKGTVVEYWQFTEEVPKTD
                     EKGQEIIGQDGKPEKETVRLERPKVFHAVVFNGEQIDGLPPLKLRPLSWNPDERAENI
                     LKNSGAVIDHRHGDRAFYSPSRDSITLPLREQFESPGAYYETALHELGHWTGHADRLN
                     RDLSHPFGSEGYAREELRAEIASLMLSQELGVSFNPGQHASYVASWIMVLQDDPMEIM
                     RAASDAEKIQGYVMAFDQVREIEQQNEAAVSISDRQNIDEASLAEEKNLINAVDKNDV
                     AAIINFMAEEKMHEGLKRFSLVISEMDDATFQNAFWQRHQKPENGESFMENLNAAKEA
                     LDEAIEQSSYRTVEEQIRQFLPEQDKESVRVVSDERVYVQIPYADREQAKMLGAKWDK
                     DQKSWYIPPGVNQEPFRKWLDSATNQAKTVTDNTPAIAKTLIDVPFREKNEARALGAK
                     WDKDQKSWYIPEGVNTALFARWMQPKQEALAEEAVPDDTPQEEAVERQVAAIQQEYQA
                     AKTEEAPAEENASRVYLAVPYEEKEEAKALGAKWDKANKSWFMESSNANLPAASKWLP
                     EKQQTQSMPAMSPVEEFADKLREMGCVVANGHPFMDGQKHRIETVGDKKGERSGFYVG
                     HLDGHPAGYIKNNRTGAEVKWKAKGYSLSPEEKAKLAAEAAQKLQMRSEQKKQAQEAA
                     VGRIKYYMESYLPVQTGTPYLNAKGIKPQPGIFTDREGQKTFIPVYNAAGELRSMQYI
                     QADGTKRFAKDSEQEGCMHVVGQQDLSKAKTIILSEGYATAASIKEATDNTVASVAAF
                     NSGNLPLVAKVLSAKYPQAQFLVAGDDDLAVEAKQGNNPGKEKALEAAKILNCRAVFP
                     VFAPGEQSSEHKAFTDFNDLAQKSKFGREGLAKQINEAIHARPANELQTLKTRGLQEE
                     ASQDRPVEQTKQQQRATTRKTASRGSR"
     gene            complement(32344..32526)
                     /locus_tag="ACFJCW_000258"
     CDS             complement(32344..32526)
                     /locus_tag="ACFJCW_000258"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150507.1"
                     /translation="MSIDIEVIAEKVADLNNPGMEVDFDPAEAEALGAFEETAMDAET
                     ARDSVADLSREVAEGA"
     gene            complement(32530..34725)
                     /locus_tag="ACFJCW_000259"
     CDS             complement(32530..34725)
                     /locus_tag="ACFJCW_000259"
                     /inference="COORDINATES: protein motif:HMM:TIGR01056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase 3"
                     /protein_id="HFC4150508.1"
                     /translation="MSRLYIAEKPEVARAIAAALGVGIERRNGYFRCSNGDNITWCYG
                     HMLALCDPEDYDSKYGNWKFEDLPIAHIPWRKKPLSDKKEQIGVIRDLLAECTEIVHA
                     GDPDDEGQLLVDELLEFLNCAKPVKRVLINDNNERSVKRALSAIEDNAKFRGLSQSAE
                     ARSVADQLYGYNMTRAYTLKAAEQGYQGVLSVGRVQTPILGLVVRRDRENQSHVKTHY
                     YHVYADLDVDGVRFTARYVPNKDQDPIDDKGRLSDPLFARQIAEAASGQPVKILAAKT
                     SAKRQSPPLPYNLLKLQADCSRKFGLKPDQVKDIGQSLKDKHRLITYHRSDCQYLNDE
                     HFDDAADVLDAVGKTASVFKNAIASADTKIKSRAFNPDKVSAHHAIIPTVKTANMDDL
                     TEDEKRVYLLIARAYIAQFWPDHEYNQTDIEAEIAGKKFVCRSNVTVKPGWMALYKND
                     QGNAETATDPEDLSVDLQMLKPGNSGRCLTAEETQFETKPRPLYTMDTLLNDLTRVAK
                     YVQNPKLRELLIEKDKGKEGEHGGIGTPATRDEILRNLLDKGFLLEKGKNIVSSEIGQ
                     QLYDALPDQAKFPDMTALWHEQQQHIVQGGLDAQRFVNSLMEYISGEVERVGREGISL
                     NVKKYPCPECGKPLRRMRGSKGFFWGCTGYKDGCKVSFSDKAGRPVLAPKKAEPSSKF
                     KCMACTHPLVRRPGKQKGTHFWGCSNYPECKQYYPDAGGKPDYSKHTKG"
     gene            complement(34728..35264)
                     /gene="traF"
                     /locus_tag="ACFJCW_000260"
     CDS             complement(34728..35264)
                     /gene="traF"
                     /locus_tag="ACFJCW_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer signal peptidase TraF"
                     /protein_id="HFC4150509.1"
                     /translation="MRRLFDRAMLAMCLTAALLVTGYGLLYAAGFRINDTRSVAKGVY
                     RISGEAVRRGSYITFCPPDTEVFRMARRRGYIRAGFCPENYSGLMKFVAGIPGDNYRF
                     TDEGLLINGRLLGGTRPLWQDGLGQPLPVFEGEGRLKDDEYILIGNAVANSFDARYYG
                     IVRREHIRDVVKPIWIEE"
     gene            complement(35261..37150)
                     /locus_tag="ACFJCW_000261"
     CDS             complement(35261..37150)
                     /locus_tag="ACFJCW_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretory system conjugative DNA
                     transfer family protein"
                     /protein_id="HFC4150510.1"
                     /translation="MFRSKNKRNNAVGHQNQAQATGSGRLVNFICLVLVLLAGMGAAT
                     QYFAHQFQYHSQLGYGIGKFYMPWSILIWYGKWHGRYEQQFMTAFSIMLMVVAVGMIG
                     LLVWNIVRKNTNKAHESLHGSARWADRKDIEAAGLLAKKGEDSDGVYVGGWVDKKGTL
                     HYLRHSGPEHVLTYAPTRSGKGLGLVLPTLLSWPYSTFITDLKGELWALTAGWRKKYA
                     HNKVIRFEPASAQGSAAWNPLDEIRVGTEYEIGDVQNLATMIVDPDGKGLNSHWDKTA
                     FALLTGVILHALYKARDDGGVATLPSVDRMLSDPEKPVGDLWVEMATYPHADGRPLPV
                     ISSAGQDMLDRPEEEAGSVLSTAKSFLALYRDNVVAANVSRSDFKIKDLMNDEDPVSL
                     YIITQPNDKARLRPLVRILINMIIRLSADKMDFENGRPKVHYKHKMLAMLDEFPSLGK
                     LEIMQESLAFIAGYGIKCYLICQDLNQLKSRETGYGPDETITSSCHVQNAYPPNRIET
                     AEHLSKLTGITTVVKEQITTSGKRVSAMLGQVSRTTQEVQRPLLTADECMRMPGPVKD
                     ARGLITQAGDMVIYVAGYPAIYGRQTLYFKDPVFEARSKVPPPRHTDRTQKKTANTPS
                     AFDTL"
     gene            complement(37167..39560)
                     /gene="traI"
                     /locus_tag="ACFJCW_000262"
     CDS             complement(37167..39560)
                     /gene="traI"
                     /locus_tag="ACFJCW_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraI/MobA(P) family conjugative relaxase"
                     /protein_id="HFC4150511.1"
                     /translation="MIAKKIPMRKANLSSFEGLVTYLAGSQGVANRVGKVEIHNYESS
                     DLRWAVQETLAVQDQNKRSAADKTYHLMVSLAGGEFLTDEQLSRIEQSMIEALGYAEH
                     QRISVVHRDTDNLHFHVAINKVHPEKKTIHEPYNDFKILGRECRKFEEEYGLQRVQRG
                     GRGNKKIDMEEVAGIESLIGWIRRECGEQIKEAKTWEQLYHVLSDHGLEIKLRGNGFV
                     ISDGEHHVKASSVDREFSKSALEKRLGAFDQKTGVKAKPSKTYREKPLSKANVDDLFR
                     QYKEEKELQKSRRQDFFLHLAQNRDMEIGRIKEKYAFRRSLIRHSSSGIARRILYRML
                     FRQMKDEIRSVRTDYARRRAVFFEQNKGFAWADWLKHRAAEGDVRALDALRRRGKDAG
                     YKGNRFVGKESGGFAGIKVDTVTKKGTVIYAEDGMTIRDTGSVLKLAAIPDDKAVSRA
                     LEIAIGRYGKVLTIGGTRHFQDKVARIAAAKGLDVSFTDGRLNHLYQQYVKEYEYVRE
                     RTDRYRQADGTGRADGRAGQQRGGAGYAGGKPRRYRWHGYDASRNRGFHAGISGYPIP
                     KLSDSGGIGAGRGQSASAGSDSLRGMPERSLVRIQGRTQVLLPRDVSSHLEQQGSANY
                     QAVRRTIHRTGGVAEIRQMQAVVGLVAKPGKKPPGFRRGSLRGMEGLAEIKISSAAVV
                     EIPKNPEPAQENERLTPSLAPIDKYIAERQEKIDKKFDILNHRKYNPSDSGVMLFRGI
                     RNIDGQALALFQPKEVEEILVMSVTPYVSRRLSSVKLGSEVKVTPTGQIRPVKGRHR"
     gene            complement(39563..39940)
                     /locus_tag="ACFJCW_000263"
     CDS             complement(39563..39940)
                     /locus_tag="ACFJCW_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraJ"
                     /protein_id="HFC4150512.1"
                     /translation="MAGARKRPKYISVYVSEEEWKTIESLAKSVGLSQSAYLKLLGLG
                     YKPASVYDGEAVKALAKINADQGRLGGLIKMWLANDERLMMFDHDQLAKAIFGVLEQI
                     GEMQESMLEIVRSRRILAAKKIG"
     gene            39990..40691
                     /locus_tag="ACFJCW_000264"
     CDS             39990..40691
                     /locus_tag="ACFJCW_000264"
                     /inference="COORDINATES: protein motif:HMM:NF036299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraK family protein"
                     /protein_id="HFC4150513.1"
                     /translation="MASLAEQDNPLSLPANKDCDVHVHHISCPNSGVQYAKDYTPNNS
                     IYRTYFDDKPPKNALSQTKNDLLYRIIVFKTILLGSFGKALSKNWQSPIEMIQMGKIE
                     KLVLAELAAMQKKGSSAGNKARFLAMQEDIKILLVDRNIPVISVWRILSEKKYVPYSY
                     ETFNRYCKMYIFKSDTTAADQTDTAQSTQEKPDSIRTDKEPPSPASEPIIAGGNTKSS
                     SGFTFNNNPDGKDLF"
     gene            40692..41417
                     /locus_tag="ACFJCW_000265"
     CDS             40692..41417
                     /locus_tag="ACFJCW_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraL"
                     /protein_id="HFC4150514.1"
                     /translation="MAIIHISLQAKGGVGKSFLALMLSMFYRHIERPVKIFDTDPANA
                     TLFGFPALEAEKFEIMKKDDIDKRLFDRLFSQILSATDDVIIDVGANAFIPLCSYIIS
                     NNLITMLTQEGHQVIIHTSIVGGQNLKHTVNGFDALCSQFPESTGFVIWLNPFWGEIE
                     FEGKSFEKLKVYEKHKSRIRSIIKIPEWDASLHGRDLAAMLEKQKTFDEALASEDFSI
                     FERQRLNIIKNEMFQTIETAQIV"
     gene            41425..41907
                     /locus_tag="ACFJCW_000266"
     CDS             41425..41907
                     /locus_tag="ACFJCW_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150515.1"
                     /translation="MDEKVKAILATIVEKNGIALSPKDPIMVVFTALEYMLSEQHAEQ
                     KALTVLFKAQVEEATGNWIQSVHQQTEELVSQQLNTTKEQAKEMSKLLLHETDRLLEQ
                     RITDAVKDFEGKLYGINDNAMNAVELRIKETRNTAILNLTAALIVLLAVIILAFKFTF
                     "
     gene            complement(41964..42500)
                     /locus_tag="ACFJCW_000267"
     CDS             complement(41964..42500)
                     /locus_tag="ACFJCW_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IncP plasmid survival protein KfrC family
                     protein"
                     /protein_id="HFC4150516.1"
                     /translation="MNEDKGLVAKAVAAETEQEELFESRQVIEETFAGVLNTYVLEKT
                     EQVERIEEKLEQLISGQMAKLQALQNARPGMLSMPSKKQTWSANIAVAQSRLNRLHDR
                     LEDVREIRDGMALGVPKIQELAARKLRMEEPDLAKKFDDVQTAVRVHNLHEKQRKEKE
                     QQKRQAGLSLSLGQKIVR"
     gene            complement(42537..42935)
                     /locus_tag="ACFJCW_000268"
     CDS             complement(42537..42935)
                     /locus_tag="ACFJCW_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KfrB domain-containing protein"
                     /protein_id="HFC4150517.1"
                     /translation="MLELFTSFLKIFSRMEAEKQRVLVLNKQHLFETEKDGKWITQAV
                     KPAPANMKPGIYLLHTAKSPQDSVRYEGQIVFQNDSYVYQKTRQSIVKYPCSLFSSVP
                     SIGEVVSISVKDKAATVEKAGIGEKKTLTR"
BASE COUNT        10875 a        11058 c         9375 g        11628 t
ORIGIN      
        1 taaaatgatt taatttaatg aattctgatc aacctgctga ttcggtattt tgcacatacc
       61 ggcagcagta aaactgggca gcccgttaaa acgggggggt attataataa attcccagta
      121 ttatccttca ataactgcaa caatcccgga aatttcttta caaggaacag attctgtttc
      181 gccggactcc tcaaacttaa tccatacctc atcgccagac aatccgcgct tgttcaaaac
      241 cagccttgcc agttggcctt gatacattac ctgcacaata gcttttttca gtttgtcagg
      301 atcttccggc tttttctctt tcacttttgc cttggatggc ttttcatgat cggcatcagc
      361 agaattttta ggatccgagt ttaaaaactc tttcaaattc cttaccgaac tacgggtaat
      421 ctcgtcttcg ttagacagca aatcttccac cgcttccggt tcttttttat acaatgcgtt
      481 caggtcattg attaccgtca aatcggatac tttccccgag ttgaatgcgt tggccagagg
      541 ttcgggtaag tccagcaggt ttgcatgctg ggtaacgaaa gcaggggatt tgcccatttt
      601 ttcggcaatc tgtccctttt tcatcccctc tgccagcaat cggccaatta cgtcggcgat
      661 ttcccttggc gttagattat cgcgctggat attttcaaca gcctgatcga tcaggctgta
      721 atcttgatcg atatatgcgg gaatctcgct cagccctgcc agcaatgaag ccctgtaacg
      781 tcgtgcgccg tggttgatga catagacccc ttcttcggaa ctttgacgca ccgatatggg
      841 tgttttcacg cctctctcct gaatgctgtt tgctagttcc tgaatttttc cttcgtcaaa
      901 ttcttttctt ggttgatcgg ggtcttcttt gattgaagca aggggcaggc gcagcggcgt
      961 ccctgatgag acctctgcat tacccaaaag ttcgctgaga ttgccgatgt tttccaaacc
     1021 caaattactg ttattcataa attttaccct tgcattttgt ttaaaacata gttagaaacg
     1081 gctttcattt cctgcgccgc ctttcttgct gccgttttct tgattttcca aaccggcagg
     1141 ctggaagaca acgcatctgc gatactgctc ctcaatccga taatatgcgg tattacaatt
     1201 tcattatact gcattttaat ttcttccaaa tgccttttat ggcgcggatt cctcatatcg
     1261 accttacttg gcaatatacc caaaaaagcc aatttgctgt tcacttttct gatattgcct
     1321 attgttgcag ccatctgttt aattccttgt aggctgtatg tttccaactc gatcggacat
     1381 aacacataat ccccggccgc cagtgcagcc gccaacgtgt tacctaaact gggcggagta
     1441 tcaataatac agacatcgaa ttgcccgccc gcttttaatt tgtcgatgtt ttgcgtaaaa
     1501 gactgaacag cattttgcaa agtcatattc tgcacgttag ccaaatcgtt tgtcgccggg
     1561 gaaagagcca gtgaaacgtt gccgggcata tgtaaatccg catcttccat atttccaaac
     1621 aaacggccgg aaccgaaaag acacgttttg tctcgaagag agtaactcgc attcccctgc
     1681 gtatccaaat caattactaa aaccctcagt ccaactgttt ccatatgcca ggcaagatga
     1741 agcgacatag ccgtttttcc taccccgccc ttttggtttg ccaccactaa aatcttcatt
     1801 cctacacctc atattttatt tctgaacgcg ataacaaaag tgagccatcc cattacgata
     1861 ccgaacgtca agataaattt gccgatataa atccatgaat cagccatatt ccagtggtac
     1921 agcatttggc acaaaacata gaaactgtac atccaagcaa accatcggac agggaaaagc
     1981 aaataggcga tagctaacac catataaacc acttcaaaca ttttttttcc agctttggat
     2041 ttaattctgt ccataggagc ctccgtccga tatagtttgt attataggat aaattatcct
     2101 atttgtcaag caattttagc ggctaaaatt ttatttacca aaatttctca atacccacat
     2161 acaagctcaa taaaacccaa taggcatatg tgatggatga ttccccactg atgaatctcc
     2221 tgaaagctct accattggtg tctttcaacc ctaaatacct gctaacttgt ttttgagtca
     2281 ttcccgttgc taaccacaat tctttgacct catcagccgt agggactgcc cattgcggaa
     2341 accggtggaa acattctgga cggatattca ggtctttttt ttgtatcaag ttatgctctt
     2401 caatattttg aagatgccat ttctttgctt gaaatgcttg gtaaggagta agtaatacgg
     2461 tggtagaaat taaatcggtc atttgaaagt tctcggcaat ttacccttgg agtaaaatga
     2521 aaaagatcta aatcgcccgt agggcgacag caaattgata aaaccggctt ttcggtcgcg
     2581 aaatatggtt ataaatggtt ataaatggtt agggcaaaaa aaagcggttt ttttcaatta
     2641 atattcagta tgttgcaaac atggcggcat gtgtaaatcc gcgatttagc atgtgtaaat
     2701 ccgcgattta gcatgtgtaa atccgcaagg gaattaggat attttgtcct aaaagcatgt
     2761 gtaaatccgt aaattttgct catattttag gcgataccga atgttatgca caggttatcc
     2821 acagttttga tttttaaaat aggtttttta tatttatttt gtctgtttgt tttttaattt
     2881 ttatcgcata tcttgacctg catattttgg tatttttgtc aaaccggcca tcggcatgtg
     2941 taaatccgca aatggcatgt gtaagtccgc aaacagtgaa aatttgctgt tttttggcat
     3001 gtgtaaatcc gcaaatggcc tgtttggggc atgtgtaaat ccgtgcttgt ggataatttt
     3061 aacgctcgac gataatcttc ccggataata caaaggcagt ttttaccaac tgcgcctcgg
     3121 tgagttcggc acaaatcttt ttagcatttt gattttgcgt tttcgctggg gagttgattt
     3181 ggtcgctgcc gcacattgct aaaaatgcag gaataggtat agggttggga tgtttgtggc
     3241 taaagacata atcggtgagc cgcctagcca ttggagaaag ttttttgtat tgactccaag
     3301 ggatgttgga aaatgtgttt ccggcaaaaa gcacgattag ttttttatcg atgctgactt
     3361 tgtaacgtgt cggttcgcct ttgatgtttt caattccgac ataattgtca ataagggaaa
     3421 tacctccgct gacgccgtag gtatttccgt ttttgatata gatctctgtc gctttcattc
     3481 tgctcaaaga ttcccggaca cgtttataat aggctccgct ggtatcccat ccgatgtcct
     3541 taataagctg cctgatgtca aattcgacgt aattccccag agggaaacga cggcagtaat
     3601 ctacaagctg catccatatc agctcgtcat ccactgaacg gagctcggta cctgtgtaaa
     3661 ggatctctac tttttctgag atatggaaaa gtttttcacg ggagaaagtt tttctcggca
     3721 cccgatgatt tcttgctgta aacaaacatg atcgggcgaa atcgttcggc atcgctctat
     3781 gctttgaacc aaagatagta tttccaaaca aatcctctat aataaggttg tcgtctgtcg
     3841 gaatgccttt tgatttcaag tattcttccc tttgggcttc atccctgcgt tcggcgacta
     3901 aattcaaata aggaagcact tcctgaacat ttttcataat ttatcctaag tcttgttcgg
     3961 ggtcgtagat aaatgagggg tctgatgatt cttcccgtcc ggcagggggt ttgaggttgc
     4021 tgtattcaat acggctggca atcatctggt ctttatagat tttttgccca tctttttcat
     4081 agttgttatt gcttatcctt ccttctatca ggataaggga acctttgccg caatacctga
     4141 cggcgttctt ggcctgttct ccatatacat ctatccaaaa atagtttgtg gcctcaactt
     4201 tcttcccatc cttggtgtaa aaatagtttt ctgccaaagg aatactggtt gtaaaaactc
     4261 ctgttgcagt ttgctccaaa gtcaaatctt tggttgttct gcctgaaatg atgaatttat
     4321 tcattctgcc tcctaggtta ctttgctata cttacggtta aaaattttag cggctaaaat
     4381 tccatgagtt attcgaaaat attcttcact aatgttctgc gtcttgcatc cgaaaagaat
     4441 ctgtcccacc aagatttggc agaaagggcg aatttgtccc cgtcttcaat gtcgggaatt
     4501 acaagagggc agggcaatcc gacattggaa accatgtcgg ccattgctta cgcccttgat
     4561 gtcccgttga gctatttgct cgaacaccac gatcttgatc cggagagcct ttcccttcta
     4621 gatggaagtc aatcaacact cccgcctaat tacgagaaga ttacggtcat tttgccgcgt
     4681 tataaggcat tccaagttaa aaagtggaac gatgatgcct taaagatttt ggcaaaagaa
     4741 accaaatagc aacattcatt aggttatttt atcccatatc tgccagatat gggctttttt
     4801 tttgctcttg aacaattaga ctttacattt tattgaattc aatatattgt atcaactcta
     4861 ttgtatggtt ctcttaatga tggaaacgac ggaaacagca gactcccgca aagaacgggc
     4921 attgaacaaa ctaaagcgtg atttgggaaa tgagtttttg gaaaagttca tgaatccaaa
     4981 cttggttgaa gtgatgttca atccaaaaca gaccggaaac ggcgtgtctg tttactggga
     5041 agagcaaggc aaggagatgg tctatgacga gaggttgagc gattggttca aaacctcccg
     5101 cgtggaagcg gttattaaaa ccgttgccgg ttatcacggc aaagtaatca ccgaagacct
     5161 tcctatcttg gagtcccaat ttcccatcga tgggagtcgt tttacggcca tcttgccgcc
     5221 ggtaaccgca tcaccctctt ttaccatcag gaaaaaacct gcccgtgtat tcactttgga
     5281 tgagtatgtc tcagcaggaa tcatgacgga aagccagcgg cagaccatcc gcaatgcagt
     5341 cagtgagcac ggaaacatct tggttatcgg cggaacaggt tcaggtaaaa ccacgttgat
     5401 taacgccatc ctctatgaca tgtcggagca gaatcccaat gagcgtctct acatctctga
     5461 ggataccggg gaaatccaat gccattcgca aaacaaagtg caggtttaca ccacgggaag
     5521 catcgatcta accaaacttg tgaaaaccgc gctccgctac cgtcccgaca gaatcatcgt
     5581 aggcgaagta aggggggcgg aagccttgga tcttttggat atttggaaca cgggacaccc
     5641 gggcggcatc gccacactgc atgcaaacaa tgccgccttg ggactggaac gcttggaaag
     5701 cctgattacc cgcaatcctg cccatccggc agcgatacgg ccgctggtgg cgcaagtgat
     5761 ccactacatc gtatccatcg gcaaagacga gaaaaccggc cgcaaaatac gtgagatcat
     5821 caaaattaag gggcttgacg aaaagtcagg caattatgtg tttgattacc tttaagagga
     5881 acagggaggc aatttaaaca gcgggattga atactgatgt tttcataagc aacgaacgat
     5941 tttttaacaa ccacgttata tctgtgaggt aaatatatga ctctgagtca atcgcaacaa
     6001 aaatggctgt tcttcatcgg actggccgtc ttcttactgt taatgtcctc gcccgcgctc
     6061 gcgtcgcaag ggcagggtgg cggtctgccc tatgaaagct ggctgaacaa tctccgccag
     6121 tccgttaccg gcccggtggc tttcgccctg tccatcatcg gcattgtcgt tgccggtggc
     6181 gtactgatct tcggcggcga actgaacgcg tttttccgca ctttgatttt ccttgtgttg
     6241 gtaatggctt tgctggtagg agcgcaaaac atgatgtcct ctttcttcgg cggcgcggaa
     6301 gttaccgctg ccgtgcaggc cgcacagcat taccttcttc ccttggcgtc gaaaggataa
     6361 aaccatgaga gccatccgca cgatacccat ccgcagagtg gcaaaccgtc ccaacctctt
     6421 ttggggtgga gatcgcgaga tggttcaggt atcccttttg attacttttg ttttagtggt
     6481 ggcggcgcaa aacacctatg ctttcgtaat cggcttggta ttttggtttt ttgcgcttta
     6541 cgcactccgg aaactggcta aatacgatcc tttgctgcgt tttgtcggcc tgcggtcgat
     6601 taccaagtac aaacgttttt atccgcccca ctccacaccg tttagaaaca atacttcaac
     6661 ccaaggaaac cgttacaaat gatcattggg attatctcgg ccatatcggt tttgggcttg
     6721 gttctgtgta cgggtctgtt cctgaaaatc cgcgccgtta ccaatgccac caaactcaaa
     6781 cagcaccgct cgaaagaaga agggctggcc gatttgctga actatgcggc cgtaatcgat
     6841 gacggcgtaa tcttagggaa aaatggctcc ctgatggctg catggattta tcgcggcaaa
     6901 gacatgggca gcagcacggt agcggagcgc gaagacgtat ctttacgcat caatcaggcg
     6961 tttgtcggct tgggcagcgg ctggatggtg cacgtcgatg ccgcacgccg tcccgcacca
     7021 aactataccg aggcaggcag gaactacttt gacagttacg ttacagaggc catcgataac
     7081 gaaagacggc aggcatttga ggccatcggc accctgtatg aaggtttctt cgtcattgtc
     7141 gctacctatt tcccgccctt actggcagaa aaaaaggtcg ccgaactgat gtttgatgac
     7201 gacaacgcca aggaaggtaa acgcgcccag caagaccgca cactctctca tttcaaacag
     7261 gcttgtgcga atctggaatc caacctgagc atttccttgg agttgcaccg tctttgcgcc
     7321 cataaagtcg ttttggaaga cggcatggaa attacccaag acgatttcct gcgctggctg
     7381 catttctgca ttaccggcaa aaaccatccg atcaaccttc cggccgcgcc catgtacatt
     7441 gacagcctga ttggtgggca ggaactctac accggcgtcg tgccgatgat cggcgataag
     7501 tttatccaag tcgtcgcgct ggacggcttc ccgatggagt cctacccggg cattttgacg
     7561 cggctcggag aaatgcctat cgagtaccgg tggtcgaacc gcttcatctt catggatcag
     7621 catcaggcgg ttgccgattt ggagaaatac cgcaaaaaat ggaaacagaa agtacgcggt
     7681 ttcttcgatc aggtgttcaa cacccattcc ggctccatag accaagacgc tcaggcaatg
     7741 gtggatgacg cggaagccgc cttggccgaa accaaatccg gcttggtggc acagggttac
     7801 tacacaagcg ttgtcatttt gatgcacgaa gaccgggctt tcttggaaag catggcaagg
     7861 caggtggaaa aagagatcaa cactttgggc ttcaatgccc gcgttgagac ggtcaatacg
     7921 atggaagcat ggttgggcag cctgcccggc cacggaatcg aaaacgtccg ccgtccttta
     7981 ctgaatacgc tgaacttcgc cgacatgatt ccgaccagca gcatttggac gggcttggag
     8041 gaaaacccct gccagttcta tccgcccaat tcgccgccgc tgatgcaggt tgttaccagt
     8101 ggctccagcc cgttccgtct cggtctgcac gtcggcgacg tcggccacac tttggttttc
     8161 gggccgactg gcgcaggtaa atctaccctg ttggccactt tggccgctca ggtcgaccgt
     8221 taccggaaca tgcgggtatt ttctttcgac aaaggccgtt ctttggaaac gctgacccgc
     8281 gccgtcggag gatcacacta caacattggc gatgaagaca acacggcttc cggtttgtct
     8341 ttcgcgccca tgcagcttat ccaaaacacg tccgaccgcg cttgggcttt gtcttgggtg
     8401 gaagcggtta tggaattgaa cggcctcaag gttacgcccc aacagcgtaa cgaaattgaa
     8461 accgccatca aaaacaatgc agccgaacag tcctattcgc tttccgatct ttcaaacacc
     8521 ctgcaagacg tagagatgcg cgaagtattg aaagcctaca ccatcgacgg ctcgatgggt
     8581 tatctgctcg atgccgaaca ggacagcttg agcttctccc gcttcacctg ctttgagatc
     8641 gaagagttaa tgaacctgcc ggaaaaatat gcgcttccga ttatgctgta tctgttccgc
     8701 agaatcgaaa aagccctgac cggcgatccc gcagtcctgt tccttgacga agcatggatc
     8761 atgttggggc atcctgtctt ccgggaaaaa atccgcgaat ggctgaaagt gctgcgtaag
     8821 aaaaactgcc ttgttctgct cgcgacccaa agcctcagtg atgcggccaa ctccggcatc
     8881 ctcgatgtcc tgaacgaatc ctgtccgacc aaaatctacc tgcccaacgc ccacgctagg
     8941 gaagaggacg cttcggaact gtacaggcgc atgggcttga atgcgcggca gattgagatt
     9001 ttggccaccg ccattcccaa gcggcagtat tactacacct cgccttacgg ccgcaggctg
     9061 tttgaactgg ctcttgaccc gctgaccttg gcctttgtcg ccgtatccga ccccgacacc
     9121 ctgaatgcaa tgcggcagac ggccgaccaa tacggggaag actggccgat ccgctggctg
     9181 caaaaccggg gaatcaatat ccataactat gtcgatgtgg acaaatacag aaggaaacac
     9241 tgatgggact gaaagacatt tttcgcggca gggaaaaagc cgaccgcgaa atgaccgaaa
     9301 acccctattt gaacgccagg aaacaatgga acttcatcat gggcgacatg gtttcgtcgc
     9361 gcctgctgtg gcaatgggcg ggcatgaccg gcctgctgat tggtttgggc ggggtagggg
     9421 gcatgattta cctcggcagc cagtcgaaat ttatccctta tatcgtcgaa gtgaacaaat
     9481 tgggcgaaac cgtggccgtg gccagagccg accagcctca ggcaaccgat gagcggattg
     9541 tccgcgccat gctcggcagc ttcatcggca atgcccgtac cgtaaccacc gatatagccc
     9601 tgcaacgcaa atacgttctc aatacctatg ccatgctgaa tccgaaagac gcggccgcag
     9661 ccaaaatgaa cgaatggctg aacggaacgc cggagtcttc gccgttcaaa cgcgcggaaa
     9721 aagaactggt cagcgtggaa atcaagtcgg tgctgagaca aagcgacaac tcttggcagg
     9781 tgtactgggt ggaaaccact cgcgcccatg acggcaaatt actcaaaccg cctcagaata
     9841 tgcgtgcgct gttgaatatc tactacgttc cgccgacaac agagcagcag attattgtga
     9901 accccatcgg catgtttatc cgtgatttct cttggtctaa cgaactgtaa caaggtacag
     9961 caatgaaaag acagatttta tccttggcgt taatcaccgc tttgtccact tccgcctttg
    10021 ccgacagcta cgccgacaaa tattttgaag gcagccacaa cccgaagctg aaccgccacg
    10081 aacaaaaagg cttgggcatc gccaaaaact actcttctga cggcaggatg gccgtaccgc
    10141 ccgttcccgg cgataacggc cgcatcacct ttgccttcgg ctctgatccg tctgtcgtct
    10201 gtgccgtaat gcaggtctgc gacattgcct tacagcccgg cgaaatgatt aacgatctgc
    10261 acgccgggga taccgcacgc tggaatatca ctccggcaat ttccggcagc aacggcaacg
    10321 aaagaatgca catcttggtt aaaccactgg atgtcggttt gcaaacgacg cttttcatag
    10381 ccaccgaccg cagaacctat catatccgcc tcaaatcaca ccgtacccgt tatatgcctg
    10441 ccgtcggttt ttcgtatccc gaagacaccg ccgcgcgttg gcgggcgatc cgggcaaacc
    10501 aagcccggca agccgaagct caggttctgc ccaccggaga aaacatccaa aacttggatt
    10561 tcaactacac catcagcggc cacaatccgt catggaaacc tttgcgcgtt tataacgacg
    10621 gcacccgcac catcatccaa atgccgccga ctttatccca aggggaagct ccggccttgc
    10681 tggtcgtccg taacggcgaa aacaccttgg tcaattaccg gcttcacgaa gaccgctaca
    10741 tcgttgacag cctgtttgac gaagccatca tgatcaccgg cgttggccgc catcaaacca
    10801 aagtcgttat cagacggagc cgatcatgaa atcaaatgtc ctgttcgtcg cgctggcttt
    10861 ggccgttggc ggatgcgcca ccgggcaata cggttctttc gtccgttcag acgccgtatc
    10921 cgcctcagta actcaagatg tagtggaaaa actccaagaa gaatttccgg cggccaacac
    10981 cgttttcttc ctgaaccgca gcaaatccga taccttcggt acgcaactgg atcaggcatt
    11041 gcgtgaaaaa ggctttgcca caaccgccca acagggcgaa aacgaaaaat cactgaatta
    11101 cgtcttggat caggttgatt ccgatattta ccgggtaatg atctacattg acggcacgcc
    11161 ctattcccgt gcctaccgcc aaaccgaaaa cggcgccgtg gttccgaccg gttcttggac
    11221 taaacgtgga gactgaagca tgagccaaag caccgaagat ctgctgaacg catcccgttc
    11281 cccttcgatc gcaccggata cttccggccg tcgtcccggt gtgcgccgcc tgaacaacat
    11341 tccgatctat atcgtcggcg gtgttgttct cggattcgcc ctgctgattg cactggtggc
    11401 agcaactaaa ggccaacagt ctgccgggca ggcaacgcag ggagacggta aggatgcaac
    11461 aagaatggcc gattccctat tgaacgaact gcctcaggaa ggcggtctga ttaccgccaa
    11521 agcatccgaa ccggccatgc ccgccctgcc tgacggcatg gcgtccgcgc ctgatttacc
    11581 ggcatccgcg cccacatctt taccgatggt tcccgatatg gccaaccttc cggccacacc
    11641 tcccgaagtg gatcaggaag cggaacaaat ccggcaggca aaagcgcaga tgttccaagc
    11701 agccctagct gccccaacca aagtggatgt cgtcgcatcg acttctcggg gttcgtccgg
    11761 cctatatact gctgccttat cttcttccgg ctcaggtaca cccaaccgta gcgagatgct
    11821 ggctcaaatc gccgaagtgc agcgcatgtc cgagaatgcc ggttccaatc ccgccgaagt
    11881 ggagcgcgtt tacaaccaac aactgaccaa tgcccaacag atggccgccg caggtggtca
    11941 ggacggcgta caaggggcag gcggcatgcc cggcctgaac acacctccga ctcccggcaa
    12001 tatcccgaga caaacggcac aaaacggtgg aaacaactgg cggcttgaga gccaagtcga
    12061 acgtccgaac gcctacatga tccgcagcgg tgcggttatc cctgcaaccc tgatcagcgg
    12121 catcaattcc gatctgcccg gcatggttca ggcacagatc tcacaaaacg tgtatgacac
    12181 cgccaccggc cgtcatctgc ttttacccca aggatcgcgc ttggtcggca cttacagcag
    12241 cggcatcaat cttggccagc gtcgcctgtt tatcgcgtgg aaccgcatta ttttccctga
    12301 cggtaaagcc ttggacatcg gcgatatgcc cggagccagc ggcgcaggct acgccggatt
    12361 cagcgaccgc atcaacaacc attacggccg tctgtggggc aatgccctga tgctctccct
    12421 agtcggagcc agcatcactt acggcgtgga caaaaacagt aacaacaata acaacggcaa
    12481 taacaacggc aacaactcca ccgtgcgcgg agccttgtcg gagtccttgg gtcagacctt
    12541 cggacaggcc gtgtcccaaa gtattcagaa aaacatgaat gtttccccga cgttagagat
    12601 ccgcccggga taccgcttca atgtcattct tactaaagac attgatttct ctaagcccta
    12661 tcgttccttt gactattaac aggagagcat tatgcaaaaa cgtcttttaa gcaaaaccaa
    12721 gaccgtagcc ctgtctttgg ccgtttccgt gtccttgggg ctgtccgcac cagcatacgc
    12781 aggcatcccg gtaacggatg gcggcaacat tgcccaaagt tcggtctccg ccattcaaaa
    12841 tgtggcgcaa accctgaagc agattgagga gtaccgaatc caactgaaac agtacgaaac
    12901 ccagttgcgg aactccttgg ctccggcggc ttatgtttgg gatcaggcca acaaaactat
    12961 ggccaacatg aaggccgctg tcgcccgctt gcgagcctac aaacagcaac tgggtaacat
    13021 ggaagagtac ctgagcaaat tccaagccgt ggacttctac aaaagctctc cgtgctttac
    13081 cgccaaaggt tgctctgcgg ccgaccgcgc caaactcgag caaaactacg cccaattgtc
    13141 gcgcatgcag aaattatcta atgacggcct attaaggagc atcaataacg agatcgactc
    13201 catcagcaga gacgccaaca ccttaaccca actccaacga aacgcccaat cagccaccgg
    13261 ccagttggag gcactacaat acgcgaacca gttccatagc gctcaagcgc atcaactgct
    13321 tcagttgcgt aatatgatta atactgagat gcaggcaaat gctgcttatc gtcaaagtca
    13381 acttgataga gaggctagat atgaagctgc tcgtaaacaa gttaggacgt cggatatttt
    13441 gaaacaccct tatagaagag ggcaataaaa atagggtttc taatgtgtaa taaacattag
    13501 aaacccactc taaatttgaa agattacctc atgagaactt tattttttgt attgctaagt
    13561 agtttcatgc ttgttgcgtg ccaacaaaag gatgagaacc aacaacgcag agaagaacta
    13621 cgtaaagtag atcaggatgt cctaaaacgg ccatacaaaa ggaaagagta gttattttct
    13681 tatgcaatat ataacccaaa ttatgaaaaa aaaatatatt tattatttta tattttttat
    13741 aacgctctct atgccaatta tctctcatgc agcaggtcaa ggaggagttt tagatgaggc
    13801 attatcacgc tacgaaggta aaatcggagc gtgggaagca gcattttata aagctggatt
    13861 atttatattt tggtcattat cttcaattag tattgtaatg actggagccc aactgatttt
    13921 ccagagagat aatatcagca gtttttttgc tgaatttact cgtttaattt tattcttagg
    13981 atttttcctt tggattatca caaacggaat taaaattgcg acatcaatta aagatggttt
    14041 aatgaaactt gcaggacaag ctagtggaaa tggtgagcag attacaccta gtagtattgt
    14101 tgacataggt tttaatttat ttgacaaaat tgttgaaaat agctcaatct gggatccaat
    14161 tgatagtgcc actcttattg ttattggttt agttatttta ctaatcttag ctgctgtcgg
    14221 aattaacatg ttattaatgt taataacaac ctatattgtc atctattcag gaataattat
    14281 cttgggattc ggcagtggac gttggacatc agatatggct gtcggatatt taaaacaagt
    14341 attaaactta tctttacaat tagcagctat gattctaatt attggaatag gtcaatcgat
    14401 tgttcaagac actataaaca ctataggaac ccctggattt agagaactag cagttgttct
    14461 agttcaaaca gctttacttg ttggtttagt cgttaaaatt cctccaatga taggttccct
    14521 agcaggagga gcaggaagtg gaggaattgg ctcctttggt gtaggtaatg ctattgctgc
    14581 tgctgctatg ttggcaggtg ctgctgccgg agcaggtgcg gcattaaaaa gcttagccgt
    14641 agaagctggt ggtttaaaga aagcatttga agctgcaaaa gcaggcttgg gaggttcaaa
    14701 tggctcatca gattcaggta gtgggaagat ggatagcgca gttgatgccg ttgcaggtgc
    14761 aaatgccgga gataaatcta accaagatgg aaaaccactg actgctgagt ccagtggtaa
    14821 ctcagaaaat ggtagtgaag gatctactac aggaaattcg ggaggtaatc catcaggctc
    14881 ctccgaagaa aatacaattt catccggaag ctcctcaagt tcgggggaag caaattcaac
    14941 aaatacatcc gcttcatcag gagcggaagg tagtgccgaa ggggaggcta cttcatcaga
    15001 gacatctcaa tcagcttctg attcgccaag caataatagc ggagaggcga ctcaaacggc
    15061 tgacaccaca ccaaaaacaa ctaataccgg tggaggaagt cctcttgcta ctgcgatggg
    15121 tggtaataaa gtatcaaatt ggcaggcggc aaaaaacgtt gctgtcggcc ttgttagcag
    15181 caaatggaac aatgccgtca ataactctgc cggtggccgc ctagtcaaac actgggagga
    15241 cgaaaagaaa aaaacagaag accccacaaa aaatccccaa aaaaaccctg aaggagatga
    15301 caatgcttaa aaaaacgctt atctgcatat tgctggtcgg ttccgtacac tttgctatgg
    15361 ccgaaagcct caacgatgcg ctgaaccgca gccgttcggg aaactcgaac aacaacaggc
    15421 cgcaggttga agacttgttc accggtgatg taaagctggc ctgcgaagcc acgttatgcc
    15481 tgtccacggg caaccggccg agtgaatgcc aaccggccat ccaccgttat ttctctatcc
    15541 gccacaaacg gatgggagac acaattcgcg cccgacacaa cttcctgcgt ttatgcccgg
    15601 catctaaaga gcaaggcatg cccgaactgg ttaatgccat tgccaacggt gccggtcgat
    15661 gtgatgcccg ggaactgaac cgtatcaacc gttccactta tatcaagcgt gtttgggtcg
    15721 gatcaagacg gcatggagac tggcaagagg tcaaagtccc ctatatccgt aacgccaaac
    15781 cttcgtactg ctctgcctac tttgaaaacg gctggacaca gcttggcaca cgctatgtag
    15841 gtgaagagaa aaatggcggg aaatgggttg actaatggtt tatgtggccg acctgccccc
    15901 atttatgcag gaacgtgtta cctgctcgat tgctgcggct gaaaaatacc atctgccgcc
    15961 acattacctg ttggccgtgg ccgaacgcga aaacggtcgt cccggtcaac aggtacgcaa
    16021 taccaacggc acctatgatg taggcgcgat gcagattaat accgcctata tccgcaccct
    16081 atcccgttac ggtgttactc agtcagccgt tgcccaaccc ggatgctatg cctattactt
    16141 ggccgcatgg cggatcaagc ggcacatcgt ttatgataga aagggagata tttggacaaa
    16201 gatcgcaaac taccattcct atacgcctaa atacaacgca atctatcgcg cagccatcat
    16261 tcggttggcc gaaaaatggg aaagatggct tgccggtagg caatggaata acgccaaggg
    16321 aaatacttcc acacaagctg tttcagccgt tcggacaatt cggccgcaac cattgcccaa
    16381 gcaatatgtt tccccgacga ccgtctatgt tcctagaaca atccgggtgg tagagcgttc
    16441 cccggagcca gagccggaaa ccgtccaaaa ctaacagtaa aggccgtctg aaaaagagtt
    16501 tcagacggcc ttttatcaga tgtgcgatgg ttacgaatac aatgcttgcg aatggagcgg
    16561 ttggcaatct tcaaaagaaa aagccttgtt agaggctatc cgcagggcgg ctattcagaa
    16621 taccccggaa taccggcaag cggattgttg gatgattaac tgattccccc cttgacatgg
    16681 atggtaaatt catgtttata tcaattcaat tatttaggag gtatggaaat ggcttacgca
    16741 attgcatttg atttggatac gaccgtttta caagaacttt accctaataa acgtagctgg
    16801 caaaatgctt acggcgatgt aaaaaaaacc ttggtcggat taggttttaa ccatcaacaa
    16861 ggcagcgtat attttggagg ctctggggtt acagccgtta gctgtgtttt ggccgcccaa
    16921 aaactgagcc agacctacgc atggtttaag ccggccgttt cggatattcg tatgttgcgg
    16981 attgaggaaa tgaacgattt gcagcccgct ttataaagcg ataggtatct taagaaaagg
    17041 gcagcgcggt atccccgctc tgcccttttc ctttccttcc ggcgttgccg gataaagtac
    17101 caaactactt tgccttgcaa gcccgtttga ccgtactttc gctaacattg aaatgtgcgg
    17161 ccgtccggga aatactggtt tgttcagact gccgccatcg gcggatttct tcgggatcga
    17221 ctttcacttt ccgccccagt tttttccctt cttccctagc attgcggata ccggccattt
    17281 gacgctcttt gatgtaactg cgttccaact ccgcaaatgc gctgacaata gccagcatcg
    17341 ccgtgcctaa cggactggcc aaatcgaagt tttcccggag cgaggttacg gccacgccct
    17401 ttttctgcaa aaactgcacc gtctccaaaa catcgatggt atttctgccc aagcggtcaa
    17461 tagccactac gactacggta tccccttggc gtacaaattc agccatctta cggaactcag
    17521 gccgattcag ggcttttact gcacccgaag cggcctgatc ttcataccac cgttcgattt
    17581 ggtatttgtc ttggataacc tgtctttgtg cggccacatt ctgctctttg gtcgataccc
    17641 tcaaatagcc gataatcata attcctcaaa cggattaaaa actcttgcgc ccaagtgtga
    17701 aaaatccttt tcattgcgcg ttaccaccat catatgctcc tgtccaacgg tcgtcttcga
    17761 taagcacacg gtcaaactca atgtctgcaa tatctacctc ttccggagga acggccaagg
    17821 catcagcgat actctccccc ttacccaacg attctgctcc taacgaaagg tcatggggac
    17881 agccattcaa aaacggagac aaccgtacct tataagccgg aaaatcggta acaaactttc
    17941 tcagtttttc atcaaccatc ctttgaacaa atggattgcc tgtcgctgcc tcgatgttgt
    18001 gcaaaatgtc ggccaaatct ccgattatcg tcaaattatc cagcgcagcc gcataactct
    18061 caggccgata cccgcgccgg gaataagaca gttccctgat aatcagcgaa atttccgtga
    18121 tcaaccgcat tttttctttc atttccgtat ccctgcttat ctgctgatgg attttttggc
    18181 ggaatactcc aaagacttga caatcaattt gcccttattg cttccgatag aaacgttctg
    18241 ccctatctca accaatttgg ccagtctttc ttcgttatgt gttgcattgt gcctgacaag
    18301 cccgtttttg gttttctgaa ataccgcagc ggcatccttg taaatgattt ctccggaata
    18361 agtttgacca gtctctgctt ttttagcttg acctagtaaa tagataccgg ctttcatgcc
    18421 tgttacagga atttgttccc ccttagacca caactcgttt gctgactttg tttctagggt
    18481 aacacccttg gagttagtaa ctaccctttg cttggaatac tcttttttgg cgaaaatact
    18541 ttcaagatcc atactgccct tggcctgatt gaaacattcc cggctgattt tccctgaatc
    18601 gaaatcacct tggattttct cagccaacct gcccaatatt tgttcttgcg accccaagga
    18661 aagcatttta atgacatcat cgaatttatc gataaattca ctgttcctgt cttggttgat
    18721 gccgactatt tttaccgcat cgccaaactt atccctgatt tgactgagcc cgttaggaag
    18781 attagcctga atatcggcca tgatgcctat actagctccc ctaccatatt cgttaaaccg
    18841 tttgtaagta ttgtcggaag ctctctcagc cctcatgctg acggccacaa taataacttc
    18901 gaggccacga tccaaacatt gctcaatctt gcgaaaagca gactgcggcc gcgcaagctg
    18961 tccttcaaaa agcagcttgg tggtatcctg catcatcatg ttctttactg tcgaagtttt
    19021 tcccgaaccc ggaattcccg taacgaaaat aacttctttc ttctgtggct cgtcgcgttt
    19081 cagcacctcg tcaaactggg tagaagataa aactgctgct gaattgtgga tagcattatt
    19141 aaccgttgcc ctgtcttctt tgttttcaaa agctggaaac aactctttaa acgtatcagc
    19201 acaaacatat ctaccgcctt ctgtatctgc atgttggcta tataaagaca atatctcgtc
    19261 tgtttgttcg gtcgcaaaac ggatggcctc atcctgaacg gaagacaaat attcgttatt
    19321 gccaaaatct ctcaaattaa tatcgctaga cagttttacc atagcggatt attgctcctt
    19381 atttgccgcc cacaacactc tcaacttagc tagaagctcc ggagatgggc cggcatacaa
    19441 gcgtttttcc acttctttgc ggaaggcttc gtctgtcatc atcctgcggt ttttttcgca
    19501 agcctctttt atcattctga tagcattact ttcttggggc tcaactttat tcataataaa
    19561 atcctaatct taattttata ttactcatca tcgcttcatc gttttcttta atgaggcatc
    19621 tgccggttta acggacaatt catttccttc ccgcttaata gaaaccttct gaccaatttc
    19681 cacctgttcg gacaaactag aaaactttcc ttccgccata ccctgaaccg ccttatggcg
    19741 tatcagacct tggtcagtct tctggaaaac cgatgcctcg tctttatgga caatctctcc
    19801 gctgtattcc ctgccggatt tagccggttt cgccgtgcca agcatgtgaa taccagcttt
    19861 catccccttg gcttcagcct tctcaatatc ctgccatgtg tcgcctgatt tgcgttgcag
    19921 tgttgcccct tctgaattag ccaccaccct ttcctgacgg taaatctctt ccacacgctg
    19981 ataaattgct tcactatgct gtttgaccat gccgagataa ttaggtattg gatcgatact
    20041 gcggctttct gcctgaagct gtatctcgtc ccatgctttt acaacctgtt tcaaccgttt
    20101 aggggttatt tcctgataag ccgatagtgc atcttttgcc gtttcatact ggttttgtcg
    20161 ccgattcaaa ctgtcataaa ggatgtctcc tgcgcggttg gtaacacgaa ccctgtcaaa
    20221 acttgattca cattgagaca acgtatcctt gaatccagcc attgcctcgt tatggtacga
    20281 ctcttcaaca aatctaggct gtgaaacacc tttggcatgt tgttcctcat aacgcttaaa
    20341 aatcccggct acactctctt cagaagcagt ggctaccgcc agcatttcta ccccgtaccc
    20401 ttctgatttt ctatcacgga taaattggct gatacttgca gcatttctaa atgtcccctc
    20461 ctccacaata ttccgccggt tttcttttgc actattccga acactaatgg ccaaagcacc
    20521 ggcatctttc tgagtttgtt cagacgaata caccaccccc tccggcgcag gaatcagtgc
    20581 acgcataata tctgcatcca catggatata tccgccttct tggcgtaact cgcttttagc
    20641 taaagaagct gccttactct tacccgctcc gggttgtgcc ccaactagaa caattttggg
    20701 ttgctccaca ctttgcgttc tagataaacg tggcttcatg aaaccattca gaattcttgc
    20761 cttaccttcg gcacttaaag gggtgtactc aatcatttta cacgtccaac tgtttggtca
    20821 tccggattga aaatacgcgc gataatatct gtgtcctccg gagagaggct gtcacgcaac
    20881 atatcgatag cctcaagcct tgctgtacag tattcgataa acgcttggtt tggtttatcc
    20941 tttacaaact cggactctct tgcctgaatt aatgggcgca tcgaatctcc caacaactcc
    21001 aaagccactt cataattgat accaggaata gtttcttgca tttgcatctt ggcttcctcc
    21061 aaaagttatc cacaaatttt gttagtaagc tgcccatatc gccagcctgc cacatataat
    21121 aaattgaatc ttcgtcatca aaccgttttt gcctgctttt taagcaacat ggttcaaaac
    21181 ctatgtttga ataataagcc agttcaaaat aaataacaac gtttttgacc tatacttcca
    21241 gaccttaacg aaacatggtt cataaagtac actttttgca cctacttatc taagttaccc
    21301 acctcttaat caagatttgg ccattgccca ccatatccca taatgtgtag aaaccagtag
    21361 cgttgggtgg atgacggcgt ttcgggtttt ccgcaggcgg cagacagcct gcaatggtag
    21421 tggctaatcc tgcgcgctat tgcatgagac acaaacttca agatagcgca gtaaggcttt
    21481 ttctatcgtt tgtcgattaa catctaggtg gaaaagagac ttatattcgg atgcaatgct
    21541 ttttgccaga ttggcaataa acatcttgtc atcttcatct atatcaacat ggctgataaa
    21601 agtcggtttg gccaaattct tgacagtgag ataggcattg aattctccaa cactcatatc
    21661 cgaggaataa tattgcagct ctatcggttt cattttttct tcgattttgg cttcaatatt
    21721 cttcaccgat tcctgccgtt ccgcttcttt caggcagcct gaaaaattgt ttttcagtgc
    21781 caatgcgtgc agcagagcgt acagggcatc gctaccggct gccgacagcg gaggcacgga
    21841 ttcgagcagt ccgccggaga cggtttcggc tgccgcaccg tagcggccgt tctctttcgt
    21901 caggcggata atgatttcgt attcttggac ggttttcatg ttcatactcc cagttgtctt
    21961 tgttcagtct gtgctaacgg cgtatccagc cgtactccgg cggcggcatc ctgcccgact
    22021 ctctttcacg tttataatta taggataatt tgtcctactt gtcaaataaa ttttagccgc
    22081 taaattttta ctctcgctta tttattcatt ataataaatt aatcgttatt ttgtttttga
    22141 taaaaaattg gagattcctt tacaaatatg ctcttacgtg ctattattta agtatctatt
    22201 taaaaggagt taataaatat gcggcaaggt attcttaaat aaactgtcaa tttgatagtg
    22261 ggaacaaata attggatgtc cttttttagg agggcttagt tttttgtacc cagtttaaga
    22321 atacctttat catgtgattc taaagtatcc agagaatatc tgtatgcttt gtatacctat
    22381 ggttatgcat aaaaatccca gtgataaaag tatttatcac tgggattttt atgccctttt
    22441 gggtttttga atggaggaaa atcacatgaa aattattaat attggagttt tagctcatgt
    22501 tgatgcagga aaaactacct taacagaaag cttattatat aacagtggag cgattacaga
    22561 attaggaagc gtggacaaag gtacaacgag gacggataat acgcttttag aacgtcagag
    22621 aggaattaca attcagacag gaataacctc ttttcagtgg gaaaatacga aggtgaacat
    22681 catagacaca ccaggacata tggatttctt agcagaagta tatcgttcat tatcagtttt
    22741 agatggggca attctactga tttctgcaaa agatggcgta caagcacaaa ctcgtatatt
    22801 atttcatgca cttaggaaaa tggggattcc cacaatcttt tttatcaata agattgacca
    22861 aaatggaatt gatttatcaa cggtttatca ggatattaaa gagaaacttt ctgccgaaat
    22921 tgtaatcaaa cagaaggtag aactgtatcc taatatgtgt gtgacgaact ttaccgaatc
    22981 tgaacaatgg gatacggtaa tagagggaaa cgatgacctt ttagagaaat atatgtccgg
    23041 taaatcatta gaagcattgg aactcgaaca agaggaaagc ataagatttc agaattgttc
    23101 tctgttccct ctttatcatg gaagtgcaaa aagtaatata gggattgata accttataga
    23161 agttattact aataaatttt attcatcaac acatcgaggt ccgtctgaac tttgcggaaa
    23221 agttttcaaa attgagtatt cggaaaaaag acagcgtctt gcatatatac gtctttatag
    23281 tggcgtactg catttgcgag attcggttag aatatcggaa aaggaaaaaa taaaaattac
    23341 agaaatgtat acttcaataa atggtgaatt atgtaaaatt gataaggctt attccgggga
    23401 aattgttatt ttgcagaatg agtttttgaa gttaaatagt gttcttggag atacaaagct
    23461 attgccacag agaaaaaaga ttgaaaatcc gcaccctcta ctacaaacaa ctgttgaacc
    23521 gagtaaacct gaacagagag aaatgttgct tgatgccctt ttggaaatct cagatagtga
    23581 tccgcttcta cgatattacg tggattctac gacacatgaa attatacttt ctttcttagg
    23641 gaaagtacaa atggaagtga ttagtgcact gttgcaagaa aagtatcatg tggagataga
    23701 actaaaagag cctacagtca tttatatgga gagaccgtta aaaaatgcag aatataccat
    23761 tcacatcgaa gtgccgccaa atcctttctg ggcttccatt ggtttatctg tatcaccgct
    23821 tccgttggga agtggaatgc agtatgagag ctcggtttct cttggatact taaatcaatc
    23881 atttcaaaat gcagttatgg aagggatacg ctatggttgc gaacaaggat tatatggttg
    23941 gaatgtgacg gactgtaaaa tctgttttaa gtatggctta tactatagcc ctgttagtac
    24001 cccagcagat tttcggatgc ttgctcctat tgtattggaa caagtcttaa aaaaagctgg
    24061 aacagaattg ttagagccat atcttagttt taaaatttat gcgccacagg aatatctttc
    24121 acgagcatac accgatgctc ctaaatattg tgcgaacatc gtagacactc aattgaaaaa
    24181 taatgaggtc attcttagtg gagaaatccc tgctcggtgt attcaagaat atcgtagtga
    24241 tttaactttc tttacaaatg gacgtagtgt ttgtttaaca gagttaaaag ggtaccatgt
    24301 tactaccggt gaacctgttt gccagccccg tcgtccaaat agtcggatag ataaagtacg
    24361 atatatgttc aataaaataa cttagtgtat tttatgttgt tatataaata tggtttcttg
    24421 ttaaataaga tgaaatattt tttaataaag atttgaatta aagtgtaaag gaggagatag
    24481 ttattataaa ctacaagtgg atattgtgtc ctgtatgtgg aaataaaaca cgattaaaga
    24541 taagggaaga tactgaatta aaaaaattcc ccctctattg tccgaaatgc agacaagaaa
    24601 atttaattga aataaagcag ttcaaagtaa ctgtgattac agagccagac gcaaagacgc
    24661 agagccgata aaatgagatt aatacaatct cattttatcg gctctttccg ttatgtatgg
    24721 attcttttaa ttagtcttcg atgtttcttg cttcgttgat accgctggct aaagattcca
    24781 ttaaggatag ttctttgtct gtaaagctat ccatgtattt ctctatctgt aatcgtcggg
    24841 tgctttttac caagttatta gcaggtaaga aaaattcatc aacggaaaca tgaagtaacg
    24901 atacaaggtc ataaagaact tgtatgctgg ggtgttgccc tttattttca atattagtta
    24961 agtaccgtgg gtcaatttca atcaatgctc ccacttgttc acgagttaaa cctcgtttca
    25021 atcgagcttc tttaatggct aaaccaaagg ctctaaaatc atatttatct tcttttttac
    25081 gcatagtaga ccacctctat acattttatt gttcctactg aattaaaaac aggtatagaa
    25141 aaacgtgtta tatggtttat aggtttatat ttaataaaaa gcactactaa acgccaataa
    25201 aaaaaaccgt tatatggtag tgctatttac gctgttaaaa tattgtatat tacttccaaa
    25261 tggcggtttg ttggaggtca acgtcgccat gaagtacatc atatacaata aatttcctta
    25321 cattgggtta tcaaaaaaat taactgtgag taattggaga caccatgcca catgagcaaa
    25381 tgattgatgc tttttcagca gtcattcaaa actccttaag cctatatgaa gagcaaactc
    25441 cgatatacta ctacctgact atctgcggtt cttgggttct gactgcactc ggcatcctct
    25501 ccttggtgtc cgtattcttt accatcaagc agaaaaaacc ataccgtttt atcgtcccga
    25561 ttctgttttt atggctggga tatgaaagca tccacatgcc gcgcccgaat cttgctgtat
    25621 tctacggata caacttggcg cagctttcct atccggcaaa cgaaaatccc aattcgttcc
    25681 tacatctcac agacggctca aatccgattt gctgcttcat aggcgaagac gagtatttgc
    25741 aagccaaacg gttaggtttc aaagagtatg ccgatgcaaa agcaaaggct ttggttgatt
    25801 tgattgaaat ggagaaaaaa tccaaacaat ctgattgaat ttaaaattca atcataacgc
    25861 ggtagggggc tggtcaagcg aaggttcagg ctctgactga aatttcgctt ggacaggggg
    25921 tgtggggcgg agcgcagcga agggctaccg cgtggcggcc gaagccgccc gacaaactcc
    25981 agtttgtcgc tattccgttt tcagtgcgta aatacctttc cccactctca gaaaaaagcg
    26041 ttcgtcctgt aacacctgcc taactttggc ctgccagttc ctgttttctg cccgcgcggc
    26101 ggcatacggt tccatttcgc cataaatctc catcaagccc atatccctcc cgtctgccgc
    26161 ctgcaatacc cgtcttacgg cggctttcca tgtaacggct gttaccgcct caaccctatt
    26221 catcgctttg gctaaaaagt acaaggccgt ctgaatctct tttttaaaga ccagcagttt
    26281 ttcatgggca attcgtacca gctttccgcc atattggcgg ctgtcgctga cgcagttgtg
    26341 ctggattttg ataatctcat ccaccagccg ccccgccgcc atccgttcaa ccatgctgct
    26401 caaattgtag taacggccgt ccttcctcat gttgcccatt agaatcccat aatgcccgcc
    26461 ctgctcggtc gcatcatgga tgttcatcat ggccagcaac atagcctcct gaaactgttc
    26521 caagtccatt tggctcaaat cccacggatt ggctgcatca ccccattgat tgccactgta
    26581 tcgaatcatg ttccaataag gcggatgcca ccaaatcaaa ttggcctgtt ctcctaaaaa
    26641 tgccgcaaaa tcctgagtca gcaggttata tccctgatgc aaatccgttc ctttaaaacg
    26701 aatgcccatt tcttccgcaa catccgaact ggtaccgctg ccgatgctcg ggtcggcaaa
    26761 cagtccttcc ggagcaagat agctttccac aaagtcgcgg atgatatgcc ccgtacaatt
    26821 tccgcgataa ccgcttttac cgtaatttcc gcgctgcgga taagaacaaa cagaatgcgt
    26881 aaacatggtt cattcctcct ttaaatcgtc ttcgttttcg cgataatggc aacctaatac
    26941 tgcatccaag tcccgcatgg tttccaccag ctcgtcattg acataaaagt gtgtatccag
    27001 cgcattgatt aaaaaacccg tccgcaagaa cggccaccgg ttgcggatgg tatcctgcaa
    27061 acgctccagc aaatgatgct gccgaaggtt tccaaaatgc ggaacggttt catatgtccg
    27121 tgccgtttcc caaatgtcct gctcgaagtt gataaacgag tcgccgccga gttggcgcaa
    27181 cagattcatc caaccatcga aactgtcgga cacatcatcc caataaagca taatttcctc
    27241 cttatcactc aatccctgca tcggccaaaa tcaaagctaa gatgccgctg cgccgtgctt
    27301 tggcagtttt cagtttcaga cactgcaaat catcgcaaac aatttgatac ccgcgcgtct
    27361 ccagttcggc cgcttctgac acttgcaggc tgtaatactg cccgccatcg aaagtgtatc
    27421 gacaaagcag tgtaggggcg tttcgtccgt tccacatgac gttaatcgga ctgaatccca
    27481 tcaactcccc attgctccaa atattctgct cgacaaatac attcggatgc ctagttaatc
    27541 tgttggtata gctcgccatc tctgtctccc gtactttcct tggtgttaaa cggtttttga
    27601 actgaaccag caccggcgtt tccgccccgc tgtgatgacg ttaaaagaca aactgctttg
    27661 agatacaagg ctgccgcagg caccgcaggc tcggccttgt atctcaaagc agtttgtctt
    27721 aggcatcacg caacagcggg gcgggaatgc cggctgcgtc gaatggccaa aagccgttta
    27781 acaccaagga aaaccatctg ccggccgcag ccggctcatt gcccctcacg gggaaggggt
    27841 ggggttcgga gaggcggtgc cgcagcacgg ccgacactta aaccaagagc ggtttgatgc
    27901 cttagcatga aaccgctctt tccattcaat cctgctgact cttgattagc ctgaaactcc
    27961 cagcaccttc aagataaccg tttatagtct tgcgaatggt aacatattcc gtccccatca
    28021 ttccggatcc gcccttagtc caaacaaacg gctccttcgg caagaaagga atatattcct
    28081 cctcttgagt ctcccccatg ccaagactaa tctcgggctg attcccatcc gtctcataat
    28141 acagcttttc gtcccctttg aaaaaatcgg cgacgaccgc ttccgcctct tcaagagatt
    28201 ggctgataaa taaagccgaa ctaccatagc cgatctcacc tgtctctaca aggtagaaag
    28261 ttcgattttc agcggacaga ctcattttct ccactcccga taaacgccta tgtcgttatg
    28321 gataaaggtt gaatagatac cgatcccacc taccctgaac cttcttgcca aagcggcaag
    28381 ctcggaaagg gacgctcttt cgatatgaaa gtcccccgca ttgccggaca aatgctggga
    28441 gtttttggcc gccccctcta acgagtcgtt atgtcggcgc gtgcggaatc cgctatgcaa
    28501 aaccaactcc ggattcggcc tgcccaaatc acgcaaatac tgctgctggg caaacagcag
    28561 attgatcaaa ttgatgttga tggcgtgcat ctgatggttg tccaccacat cccgcatcat
    28621 ccaacacaga gccttatagc cctcttggat atactggccg tcggcaaaga atttgatgtt
    28681 tttccgttcc cgggaagcag gccggtaaat ggacaatacc cggcttcgtt tccaaaaccg
    28741 gctatcatcc gccaaaacga tttccggcaa cagtaaaagg ccgcctgatg aagcaagcgc
    28801 ggccgctttg gccgacagct ttaaaaaatc ccgacgattc aacgctccct ccctttcacg
    28861 ttaccgctga ccataaaagc ataccggccg tattcgttac ctccctcatt cgccgtttcc
    28921 ccggccgaaa gggattttaa aacctgctct aatcccatct ctaccgcagg taaaaaatcg
    28981 tcatcggccg ccgtaatggt aatactgagt gtcttcgtcc cggcatgcgt acctgcccgg
    29041 cgatccagtc cgtactgctt ctgaaatgct ttgacggcgg cttgctcgga ctgattccgt
    29101 tcggccgaca tccccgtttt ctcctcctcg tgccgcagca acatttctaa ataatcgtca
    29161 aacgccaagg gctggttctg gctggttttc cggtaatcga cggcgatatt ttgcagcgtc
    29221 tgcctcagac ggccgtcaaa ggccatgccg aaaacccgcc agaaccatcc ttccctggcc
    29281 tgtttgtgat aagtcagaaa aaaagccact ctgtatagtt tgtccttatc cataacaccc
    29341 cctatcggct gccgcgcgat gcggttttcc gggttgttgc ccgctgctgc tgcttggtct
    29401 gttcgacagg ccgatcctga gacgcttctt cctgcaaacc gcgtgttttc agagtttgca
    29461 attcgtttgc cggtcgggca tgtatcgcct cgttgatttg cttggccaaa ccttcacggc
    29521 cgaacttgga tttctgagcc aaatcgttga aatcggtaaa tgccttatgc tccgacgact
    29581 gctctcccgg tgcaaacact ggaaacactg cacggcagtt aaggattttt gccgcctcca
    29641 acgctttttc tttgccggga ttgttgccct gcttagcttc gacagccaaa tcatcgtctc
    29701 cagcgaccaa aaactgagcc tgagggtatt tcgcagacaa gactttggcc accaaaggca
    29761 ggttgccgga attgaaggcg gccacgctgg ccactgtgtt gtcggttgcc tccttaatcg
    29821 aagcggccgt ggcatagcct tccgataaaa taatggtttt ggccttagac agatcctgct
    29881 ggccgacaac atgcatacag ccctcctgct cgctgtcctt ggcaaatctt ttagtgccgt
    29941 ctgcctgaat gtattgcatg gagcgtaact ctccggctgc gttgtacaca ggaatgaacg
    30001 ttttctgccc ctcacggtca gtaaagatac ccggttgcgg cttaataccc ttggcattca
    30061 gataaggtgt gcctgtttga acgggcaggt agctttccat gtagtatttg atacggccga
    30121 cagcagcctc ctgagcctgt tttttctgct cgctccgcat ttgcagtttc tgcgcggcct
    30181 cggcggccag cttggctttt tcctccggag acaggctgta tcccttcgcc ttccacttaa
    30241 cttccgctcc cgtccggttg tttttgatgt agcctgccgg gtggccgtcc aaatgaccaa
    30301 cataaaagcc gctgcgctcg ccttttttgt cgccgacggt ttcgattcgg tgtttttgtc
    30361 cgtccataaa cggatgccca ttagccacca cacaccccat ttcgcgcaac ttgtcggcaa
    30421 actcttccac cggcgacatc gcgggcatgc tttgagtctg ttgcttttcc ggcaaccatt
    30481 ttgacgcggc cggtaaattg gcgttactgc tttccataaa ccaagatttg ttggctttgt
    30541 cccatttggc accaagggct ttagcctctt ctttttcttc atacggaacg gcaagataaa
    30601 cacgggatgc gttttcttct gccggtgctt cttctgtttt ggcagcctga tactcttgct
    30661 gtatggctgc gacctgacgc tcaactgctt cttcctgagg agtatcgtcc ggcacggcct
    30721 cttctgccaa cgcttcctgc ttcggctgca tccaccgtgc aaacagtgcg gtattcacgc
    30781 cttcgggaat ataccaagac ttctgatcct tatcccattt cgcgcccaat gctcgcgctt
    30841 cgtttttttc acgaaacggc acatcaatta gtgttttcgc tatggccgga gtattgtccg
    30901 ttaccgtttt tgcttggttg gtggcactgt ccagccattt tctgaaaggc tcctgattga
    30961 ccccgggagg gatgtaccac gatttctgat ccttatccca tttcgcaccc agcatttttg
    31021 cctgttccct gtcggcataa ggaatttgaa cgtaaacgcg ctcatcggaa accacgcgga
    31081 cgctttcctt gtcctgctcc ggcagaaact ggcggatctg ttcttcaacc gtacgataag
    31141 aggactgctc gatggcttcg tccaaagcct ctttggccgc attcagattt tccataaatg
    31201 actctccatt ctccggtttt tgatgccgct gccaaaaagc gttctgaaac gtggcatcat
    31261 ccatctccga aataaccaga ctgaaacgct tcaagccctc gtgcattttc tcttcagcca
    31321 tgaagttgat gatcgccgcc acatcatttt tatcaaccgc attgataagg ttcttttctt
    31381 ccgccaagct ggcttcatca atattctgtc tatcagaaat actcactgcc gcctcgttct
    31441 gctgttcgat ttcccgcacc tgatcaaagg ccatgacata gccttggatt ttttcggcgt
    31501 cagaagccgc acgcatgatt tccatcggat cgtcctgcaa taccataatc cagcttgcta
    31561 cataactggc atgttgcccg ggattgaatg aaacgcccaa ttcctgactc agcatcaatg
    31621 aagcgatttc ggcacgcaat tcctcccgtg cgtaaccctc gctgccgaac gggtgggaaa
    31681 ggtcgcggtt caaacggtca gcatgcccag tccaatgccc caattcatgc agggctgttt
    31741 cataatacgc tcccggactt tcaaactgct cgcgcagcgg cagggtaata ctgtccctgc
    31801 tcggagagta aaacgccctg tcgccgtgcc ggtggtcgat gaccgcacca gaatttttca
    31861 gaatgttttc tgcccgctca tccggattcc aacttagcgg ccgcagcttc aacggcggca
    31921 agccgtctat ctgttcgccg ttaaatacca ccgcatgaaa gacctttgga cgctccaaac
    31981 gaaccgtttc cttctccggt ttgccgtcct ggccgataat ttcctgaccc ttttcatcgg
    32041 ttttgggaac ttcctcggtg aactgccaat attcgacaac agtacccttc tctccacggc
    32101 gcacctgcgc cccgatggat gatgcctgtt tataggttat ccagcgcgga tcctttctgc
    32161 cttgtgcctg caaccacaga ttgttaatgc cgcgataacg gcggccggta atggcattgt
    32221 gcggcataaa atccggcaac ccgccgccgt cccaaggttt ctgccacggc gcggttccct
    32281 gccgcaactg ttcgatcagt ttttccgcca cctgttcgta aaacggtttt ttattctgca
    32341 tccctacgct ccttccgcca cttcgcggga aaggtctgcc acggaatccc gcgcggtttc
    32401 cgcatccatt gcggtctcct caaacgcccc caaggcttct gcctctgccg gatcaaaatc
    32461 cacttccatt cccgggttat tcaaatccgc cactttttct gcgatcactt cgatgtcgat
    32521 actcatacct tatcctttcg tatgtttgga atagtccggc ttaccgccag catcggggta
    32581 atactgcttg cactcggggt aattgctgca tccccaaaaa tgcgttcctt tctgttttcc
    32641 cggccgtctg accaagggat gggtgcaggc catgcacttg aattttgacg acggctcggc
    32701 ttttttcggt gccagtaccg gccgaccggc cttgtcggaa aaagaaacct tgcatccgtc
    32761 cttatagccg gtacagcccc aaaaaaatcc tttcgatccg cgcatccgcc ttaaaggttt
    32821 gccacattcg ggacacgggt acttcttgac attgagactg atgccttccc gccctacccg
    32881 ctccacctcg ccggatatgt actccatcag actgttcaca aaacgttgcg cgtccaaacc
    32941 gccttggaca atatgctgtt gctgctcatg ccataaggct gtcatatcgg ggaacttcgc
    33001 ctgatcgggc agcgcgtcat aaagctgttg gccgatttcg gaactgacaa tgtttttgcc
    33061 tttttccagc agaaaaccct tgtccagcag attacgcaga atttcgtccc gagtggccgg
    33121 ggtgccgatt ccgccgtgct ctccttcctt acccttgtct ttctcaatca gcagttcgcg
    33181 caatttcgga ttctgcacat acttggctac ccgtgttaaa tcgttcaaca gcgtatccat
    33241 cgtgtataac gggcgcggtt tggtttcaaa ctgcgtctct tctgctgtca aacaccggcc
    33301 gctgtttccc ggtttgagca tctgcaaatc aacactcaaa tcctcgggat ctgtcgcggt
    33361 ttccgcattg ccctgatcgt tcttgtatag agccatccaa ccgggcttta cggttacgtt
    33421 gctgcggcag acaaattttt taccggcaat ttctgcttca atgtcggttt ggttatattc
    33481 gtgatccggc caaaactggg cgatataggc gcgggcaatc agcagataga cccgtttttc
    33541 gtcttcggtc aggtcgtcca tattggccgt tttgacggta ggaataatgg catggtgcgc
    33601 cgaaacttta tccgggttga acgccctgct tttgattttc gtgtcggccg atgcaatggc
    33661 atttttaaag actgatgcgg tttttccgac agcatccagc acgtctgccg catcatcgaa
    33721 atgctcgtca ttgagatact ggcagtcgct gcggtggtag gtaatcaaac ggtgtttgtc
    33781 tttcaatgac tgtccgatgt cttttacctg atcgggtttc aaaccgaatt tgcgcgaaca
    33841 atccgcctgt agtttgagca gattgtatgg cagcggcgga ctttgccgct tggcagaagt
    33901 tttagccgct aaaattttta ccggctgacc actggctgct tcggctatct gccgtgcaaa
    33961 cagcggatcg gacaaacgtc ccttatcgtc tatcggatct tgatccttgt ttggaacgta
    34021 acgggcagta aaccggacac catccacatc caaatcggca tacacatggt aataatgggt
    34081 tttgacatgg gactggtttt cccgatcgcg ccgcaccact aaacccaaaa tcggagtctg
    34141 taccctgccg acggacaaca ctccttgata accctgttcc gcagccttca gcgtataggc
    34201 tcgggtcatg ttgtatccgt ataactggtc tgccaccgat cgcgcttccg ccgattggga
    34261 caatcccctg aatttggcgt tgtcttctat tgccgataac gctctcttta cagatcgctc
    34321 gttattgtcg ttaatcagta cccgtttgac cggtttggca caattcaaaa actccaacag
    34381 ttcgtcaacc aacaactgtc cttcgtcatc gggatctccg gcgtgaacaa tctcggtaca
    34441 ttccgccagc aaatcacgaa taaccccgat ctgttctttt ttgtcggaca agggtttttt
    34501 acgccaaggg atatgcgcga tcggtaaatc ctcaaacttc cagttaccgt atttgctgtc
    34561 gtaatcttcc ggatcgcaca aagcaagcat atggccgtaa caccaagtga tgttgtctcc
    34621 gttactgcaa cggaaatacc cgttgcgcct ctcgatacca actcccaaag cggcggcaat
    34681 ggctctggcc acttcgggtt tttctgcaat ataaagtcgg gacataccta ctcctctatc
    34741 catatcggtt ttacgacatc acggatatgc tctctccgga ctatgccgta ataacgcgcg
    34801 tcaaacgaat tggccaccgc attaccaatc aaaatgtact catcgtcttt cagacggcct
    34861 tccccttcaa ataccggtaa gggctgccct agcccgtctt gccataaagg ccgggtgccg
    34921 ccaagcagcc gtccgttaat caacaaccct tcatcggtaa aacggtaatt gtcgccggga
    34981 ataccggcaa caaacttcat caacccggaa taattttccg gacaaaaacc cgctctgata
    35041 taccccctcc ttcttgccat tcggaaaact tcggtatcgg gagggcaaaa tgtaatgtag
    35101 cttccgcgcc gtaccgcttc gccggatatg cggtaaaccc ctttggccac actgcgggta
    35161 tcgttgatac ggaaaccggc tgcatataac agcccgtagc ctgttaccag caatgcggcg
    35221 gtcagacaca tggcaagcat ggcacggtca aacagccttc tcatagagtg tcaaacgcgc
    35281 tgggcgtatt ggcagtcttt ttctgagtcc ggtcggtatg gcgcggaggc gggactttgg
    35341 agcgcgcctc aaataccgga tctttgaaat acagggtctg ccgcccgtaa atcgccggat
    35401 acccggcaac ataaatgacc atatcgcctg cctgagtgat caaacccctt gcgtccttga
    35461 ccggcccggg catacgcata cattcgtcgg ctgtcagcaa cggccgctgg acttcctgcg
    35521 tagtccggga aacctgcccc aacatcgcac ttacccgttt gccgctggtt gtgatctgct
    35581 ctttgacaac cgttgtgatg ccggtcagct tggacaggtg ttccgccgtc tcgatccggt
    35641 taggcggata agcgttctgc acatggcagc tggacgtaat ggtttcatcc gggccatacc
    35701 ccgtttcccg gcttttcagt tggttcaagt cttggcagat caaataacat ttgatgccgt
    35761 aaccggcgat aaacgccaag gattcctgca tgatttccaa cttgcccaaa ctcgggaact
    35821 cgtccagcat ggccagcatc ttgtgtttgt agtggacttt cggcctcccg ttttcaaaat
    35881 ccatcttgtc ggccgacaga cggataatca tattgatcag aatccgaacc aaaggccgca
    35941 accgcgcctt atcgttgggc tgggtaatga tgtacagact gaccggatct tcgtcgttca
    36001 tcagatcctt gattttgaaa tcggaacgac tgacattggc ggcgaccaca ttgtcgcggt
    36061 acaaagcgag gaaagatttg gctgtggaaa gaaccgatcc ggcctcctct tccggtctgt
    36121 ccagcatatc ctgtccggca gaagaaatga ccggcagagg acggccgtct gcatggggat
    36181 acgtcgccat ttccacccat aaatcgccta ccggtttctc cggatcagac agcatgcggt
    36241 caacgcttgg taaggtggca accccgccat catccctagc tttgtaaagc gcatgcagaa
    36301 tgacgccggt cagcaaagcg aaagctgttt tgtcccagtg gctgttcagc cccttgccgt
    36361 ccggatcgac aatcattgtg gccagattct gaacatcgcc tatctcatac tccgtcccca
    36421 ccctgatctc atccaaagga ttccatgccg cgctgccttg cgcggaagcc ggttcaaagc
    36481 ggattacctt gttgtgcgcg tatttcttcc gccacccggc cgtcaatgcc cataattcgc
    36541 ccttcaaatc ggtaatgaac gtactgtacg gccatgacag caaagtcggc aataccaaac
    36601 ccaaaccctt accggatcgg gttggggcat aagtcaggac atgctccggc ccggaatggc
    36661 gcagataatg cagggtaccc tttttatcga cccagccacc gacatataca ccgtcgctgt
    36721 cctctccttt tttggccagc agaccggccg cctcgatgtc tttcctgtcc gcccaacgcg
    36781 ccgacccgtg cagagactca tgcgccttat tggtattctt ccgcacaata ttccatacca
    36841 acagccctat catgccgacg gctaccacca tcaacatgat gctgaatgcc gtcataaact
    36901 gctgctcgta ccgtccgtgc catttaccgt accaaatcag aatgctccac ggcatataga
    36961 acttgccgat gccgtatccc aactgggaat ggtattggaa ctgatgggca aaatattgtg
    37021 tggctgcccc cataccagcc aacagcacca ataccagaca aataaagttt accaaacggc
    37081 cgcttcctgt cgcttgggct tggttctgat ggccgaccgc attgttgcgt ttgttcttgc
    37141 tgcgaaacat gtttatcctt tgaaatttaa cgatgccttc ccttaacagg tctgatctgc
    37201 cccgtcggag taactttcac ttcactgccc agtttcacgc tcgaaaggcg tctggacaca
    37261 tagggtgtaa cggacatgac cagtatttcc tcgacctctt tcggctggaa taaagccagt
    37321 gcctgcccgt ctatgttgcg gatgcccctg aacaacatca caccggaatc acttggatta
    37381 tacttcctat gattcaatat atcgaatttt ttgtcaattt tctcctgccg ctcggcaata
    37441 tatttgtcga taggtgccaa tgaaggagta agtctctcgt tttcttgtgc aggctcagga
    37501 tttttcggaa tctctactac cgcagcggat gaaattttga tttcagccaa cccttccatc
    37561 ccccgcaaac tgccccgcct gaatcccggc ggtttttttc ccggtttggc aaccaaaccg
    37621 acaactgcct gcatctgcct gatctcagct actcctcctg tccgatgtat tgtccgtcgc
    37681 acagcctgat agtttgcgga tccttgctgc tccaagtgac tagaaacatc acgcggcaat
    37741 agcacttgag ttcgtccttg gatgcgaacc agactgcgtt cgggcattcc tcgcagactg
    37801 tcgcttcctg cggaagcaga ctgccctctt cctgctccaa tgcctccaga gtcggagagc
    37861 ttcgggattg ggtatcctga tatgcctgca tggaagcctc gatttcggct tgcgtcatac
    37921 ccatgccatc gatagcgtct aggctttcct cctgcatatc ccgcgcctcc tcgttgctgc
    37981 cctgcccgcc catctgcgcg gccagttcca tcagcttgtc tgtatcgatc ggtacgttcc
    38041 ctgacatatt cgtattcctt cacatactgt tgataaagat ggttcagacg gccgtctgta
    38101 aacgacacat ccaaaccctt tgcggcggca attctggcca ccttatcctg aaaatgccgc
    38161 gttccgccga tagtcaggac ttttccgtat cgccctattg cgatttccaa cgcccttgat
    38221 accgccttat cgtcaggaat cgcggccagt ttgagcacac tgcccgtatc acggatggtc
    38281 atgccgtcct cggcataaat aaccgtcccc tttttcgtta ccgtatcaac cttgatcccg
    38341 gcaaatccgc cactttcttt gccgacaaag cggttgccct tgtaacctgc atccttcccc
    38401 ctccttctca acgcatctaa cgcccggaca tcgccttcgg cagcacggtg tttcagccaa
    38461 tctgcccaag caaaaccctt gttctgctca aaaaaaaccg cacgtcggcg ggcataatcg
    38521 gttcttaccg atctgatttc atccttcatt tgcctaaaca gcatccgata cagaatgcgc
    38581 cttgcaatac cactgctgct atgcctaatc aggctgcggc gaaaagcgta tttttctttg
    38641 atgcggccga tctccatatc ccggttttgt gccaaatgca ggaaaaaatc ctgccgcctg
    38701 cttttctgaa gctctttttc ctccttgtat tgccggaaca gatcgtccac gttggctttg
    38761 ctcaacggtt tctcacggta cgttttggat ggtttcgcct ttactcctgt tttctgatca
    38821 aatgcaccaa gccttttttc caacgccgac ttggaaaact ccctatctac cgaacttgcc
    38881 ttgacatgat gctcgccgtc gctgataaca aaaccgttac ccctcagctt gatttccaat
    38941 ccgtgatcac tcagtacatg gtacagttgc tcccatgtct tagcctcttt aatctgctca
    39001 ccgcactctc tcctgatcca tcctatcagg ctctcgatac ccgccacttc ctccatatcg
    39061 atttttttat tgccgcgccc gccacgctgc accctctgca aaccgtactc ttcttcaaac
    39121 ttcctgcact cccgccctaa aattttgaag tcgttatacg gctcgtggat ggtctttttt
    39181 tctgggtgca ctttgttaat cgctacatga aaatgcagat tgtcggtatc tctgtgaaca
    39241 acagagatcc gctgatgttc ggcatacccc aaagcctcaa tcatgctctg ctcaatacgg
    39301 ctcaactgtt cgtccgtcaa aaattccccg cccgcaaggg ataccatcag atgataggtt
    39361 ttatccgccg cactgcgctt attctgatcc tgaactgcca aagtctcctg aaccgcccac
    39421 ctcaaatccg atgattcata gttatgaatc tccacctttc ccactcggtt tgcgacacct
    39481 tgagaaccgg ccagataggt aactaagcct tcaaaactgc tcaggttggc tttacgcatc
    39541 ggaatttttt ttgcaatcat gttcagccta tttttttagc cgctaaaatt ctgcggctcc
    39601 gcacaatctc caacatactt tcctgcattt ctccaatttg ctccaacact ccgaagatcg
    39661 ccttagccaa ctgatcgtga tcgaacatca tcagccgctc gtcgttggcc aaccacatct
    39721 tgatcaagcc gcccaatcgg ccttggtcgg cattgatttt ggccaaggct ttaaccgctt
    39781 caccgtcata aacggatgca ggcttgtatc ccaagccaag taatttcaaa taagccgatt
    39841 ggctcaatcc gacagattta gccaaactct ctatggtttt ccattcttct tccgaaacgt
    39901 aaacgctgat gtattttggc cgttttcgtg cgcctgccat tcttagagtc cttaatttgt
    39961 gccgcaaggc acacaacagc caacggtagt tggccagcct cgcagagcaa gataatccgt
    40021 tgagcctacc ggcgaataag gattgtgatg tacatgtaca tcacatatct tgccccaatt
    40081 ctggggttca atacgccaag gattatacgc caaataattc aatatatcga acatattttg
    40141 atgacaaacc gcctaaaaat gctttatcac aaacaaaaaa tgatttacta tatcgaatta
    40201 ttgtttttaa aacgattttg cttggcagtt ttggcaaggc tttgtcaaaa aattggcaaa
    40261 gccctatcga aatgatccaa atgggaaaaa tagaaaaact ggttttggcc gaacttgccg
    40321 ccatgcagaa aaaaggctcc tcagccggaa acaaggcaag gttcttggcc atgcaggaag
    40381 acattaagat actgctggtg gacaggaata tccccgttat cagtgtttgg cggattttgt
    40441 cggaaaaaaa atatgtccca tattcctatg agacatttaa ccgctactgc aagatgtata
    40501 tcttcaaatc cgacactacg gccgctgacc aaacagacac cgcccagtcc acacaggaaa
    40561 aacctgattc catccgcacg gacaaagaac cgccgtctcc cgcctccgaa cccattatcg
    40621 cgggaggcaa caccaaaagc tcttcaggct ttactttcaa caacaaccca gacggaaagg
    40681 acttatttta aatggccatt atccatatca gcctccaagc aaaagggggc gtcggtaaaa
    40741 gtttcttggc tttgatgctg tctatgtttt accgccatat cgaaagaccg gtaaaaattt
    40801 tcgataccga tccggccaac gcaaccctgt tcggttttcc cgcactggag gcggaaaaat
    40861 tcgagatcat gaaaaaggat gatattgaca aacggttgtt tgaccggctt ttctcacaaa
    40921 tcctgtctgc aaccgatgat gtcatcatcg atgttggcgc caatgcgttt attccgcttt
    40981 gttcgtatat catttccaac aatctgatta ccatgctgac gcaggaaggc catcaggtca
    41041 taatccacac ttccattgtc ggcggccaga acctgaagca tacggtcaac ggatttgatg
    41101 ccctatgctc gcaatttccg gaatcaaccg gtttcgtcat ttggctcaat ccgttttggg
    41161 gggaaattga gtttgaaggt aagtcgtttg agaaattgaa agtctatgag aaacacaaat
    41221 cccggatacg ttccatcatt aagattccgg aatgggacgc ttctctgcac ggccgcgacc
    41281 ttgccgccat gctggaaaag caaaaaacat tcgacgaagc cttagcgtcc gaagatttca
    41341 gcatctttga acgccaacgt ttgaacatta tcaaaaacga aatgttccaa acgatagaaa
    41401 ccgcccaaat cgtctgagta catcatggat gaaaaagtaa aagccatatt agccaccatt
    41461 gttgaaaaaa acggcatcgc cttatctccc aaagacccga taatggttgt attcactgcc
    41521 ttagaatata tgctctccga acagcacgca gagcaaaagg ctctaaccgt cttattcaaa
    41581 gcgcaggtag aagaggccac gggaaactgg atacagtccg ttcaccaaca gactgaggaa
    41641 cttgtcagcc agcaactcaa tacgaccaaa gaacaggcaa aggaaatgtc caaattactg
    41701 cttcatgaga cagacaggct gcttgagcag agaattactg atgccgtaaa agactttgaa
    41761 ggaaagctat acggcatcaa cgacaacgcc atgaatgcag tagaattgag aataaaggaa
    41821 actcggaaca cggcaattct caatctgacg gccgccctga ttgtcttgtt agcagtcatt
    41881 atcttggcgt tcaaatttac cttctgacaa aaaacccggc aatgccgggt tttttgtctc
    41941 cattctttac gccaagagaa aaatcagcgt actatttttt gacctaggga caggcttaat
    42001 ccagcttgcc gtttctgttg ttctttttct ttgcgctgtt tttcatgcag attgtgaacc
    42061 ctgacagccg tttgaacatc atcaaatttt tttgccagat ccggttcctc catccttaac
    42121 ttcctagcag ccaactcctg tattttcgga acacccagag ccatcccgtc gcgaatctcg
    42181 cgaacatctt ccaacctgtc atgcagacgg ttcagccttg attgtgccac tgcaatgttt
    42241 gcactccacg tctgtttttt ggacggcatg ctcaacattc ccggccgggc gttttgcaat
    42301 gcctgcaact tggccatttg cccggaaatc aattgctcca atttttcttc tatgcgctca
    42361 acctgttctg tcttttccaa gacataagta tttaacacac cggcgaaagt ttcctcaata
    42421 acctgcctgc tttcaaacaa ctcttcttgt tcggtttcag ccgcaacagc tttagctaca
    42481 agccctttat cttcattcat ggtgttatcc taaaatttta gcggctaaaa tttcatttag
    42541 cgcgttaaag tttttttctc tccgataccc gccttttcta ctgttgccgc tttgtccttg
    42601 acactgattg agaccacttc tccgatcgac ggaacggaag aaaatagaga acacgggtat
    42661 ttgactatag actgtcgtgt tttctgataa acatagctgt cattttgaaa aacgatttgc
    42721 ccttcgtacc tgacagaatc ctgaggagat ttggccgtat gcagcaaata aattcccggc
    42781 ttcatattgg caggagcagg cttaaccgcc tgcgtaatcc atttgccgtc tttttctgtc
    42841 tcgaacaaat gctgtttgtt caataccagc actctttgtt tttctgcttc cattctgcta
    42901 aaaattttca aaaaagatgt gaataattct aacaga
//
LOCUS       DAXGCP010000006        40710 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.006, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000006 DAXGCP010000000
VERSION     DAXGCP010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40710
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.006"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..269)
                     /locus_tag="ACFJCW_000269"
     CDS             complement(<1..269)
                     /locus_tag="ACFJCW_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC4150518.1"
                     /translation="MDMQSKAKKLIEMIQTAPVEWKPLGEVLVRTKGTKITAGQMKEM
                     HKDNAPLKIFAGGKTFALVDFDDVPDKDIHREPSIIVKSRGIIEF"
     gene            complement(436..1287)
                     /gene="dinD"
                     /locus_tag="ACFJCW_000270"
     CDS             complement(436..1287)
                     /gene="dinD"
                     /locus_tag="ACFJCW_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HFC4150519.1"
                     /translation="MTTENNAFENAKHIDETGNEYWSARTLQQILEYSEWRNFQRAID
                     KAITACETSGNDKNHHFVETNKMIALGKGGQREVADYRLSRYACYLIVQNGDPSKSVI
                     AAGQTYFAVQARRQELQDEAAFRSLGEDKQRLLLRRQLREHNTDLAAAAKDAGVEKPV
                     EYAVFQNHGYRGLYGGLDKQGIHSRKGLKKSQRILDHMNASEPAANLFRATQTEEKLR
                     RKNIQGKTQANRVHFEVGQKVRQTIEELGGIMPENQPVPEKSIKQLENEEQKRLAATE
                     QHQNGKK"
     gene            complement(1403..2947)
                     /locus_tag="ACFJCW_000271"
     CDS             complement(1403..2947)
                     /locus_tag="ACFJCW_000271"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HFC4150520.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPGQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQGIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGNFEDHRIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAVVSNPPYSIDWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTCIAVNILVLSKHKDNTDIQFIDAGGFFKKETNNNVLTEEHIAEIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEAEDTREVIDIRQLNAEISETVAKIERLRREIDEV
                     IAEIET"
     gene            complement(3022..4026)
                     /gene="rfaD"
                     /locus_tag="ACFJCW_000272"
     CDS             complement(3022..4026)
                     /gene="rfaD"
                     /locus_tag="ACFJCW_000272"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HFC4150521.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLTKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LDWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVAFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKINLYFFDHPELSGIYNLGTGRSQQFNELAAAAVNACRAAEGKSELSLKEL
                     VEEELIRYIPFPDALKGKYQGFTQADITKLREAGYKEEFFDVKAGVNRYVKWMLENLA
                     "
     gene            complement(4090..5052)
                     /gene="hldA"
                     /locus_tag="ACFJCW_000273"
     CDS             complement(4090..5052)
                     /gene="hldA"
                     /locus_tag="ACFJCW_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HFC4150522.1"
                     /translation="MPAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGDDEAAAALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNREVLEQIKRKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHVGKTVLIDPKGDDYEKYVGATLITPNCAELKEVVGSWKNEGDL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELVEALDGQ"
     gene            complement(5108..5848)
                     /gene="pyrF"
                     /locus_tag="ACFJCW_000274"
     CDS             complement(5108..5848)
                     /gene="pyrF"
                     /locus_tag="ACFJCW_000274"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HFC4150523.1"
                     /translation="MNPLITDFQTPQQRTPVIVALDFANEKDTLGFVRNLDPALCQIK
                     IGKELFTATGRSLAESLIHQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGRDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAGSTYL
                     VMGRPVTRAADPVAVLREVNRVANLEAN"
     gene            complement(6372..7019)
                     /gene="adk"
                     /locus_tag="ACFJCW_000275"
     CDS             complement(6372..7019)
                     /gene="adk"
                     /locus_tag="ACFJCW_000275"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HFC4150524.1"
                     /translation="MKALLLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVG
                     LDAVVEIDVSDSVIVDRMSGRRVHLASGRTYHVTYNPPKTEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQAVEAVKAEVLGALGK"
     gene            7234..8073
                     /gene="htpX"
                     /locus_tag="ACFJCW_000276"
     CDS             7234..8073
                     /gene="htpX"
                     /locus_tag="ACFJCW_000276"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HFC4150525.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGAGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            complement(8309..9607)
                     /locus_tag="ACFJCW_000277"
     CDS             complement(8309..9607)
                     /locus_tag="ACFJCW_000277"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HFC4150526.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGSKKTILRLIPSGILHEGLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAVLAYYNVQLQYLHNAGPVKAEDVMAVIEKVAPRIAPMIADVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPGGGKTDILPCGSDAVETCKPIYETMPGWRESTVGVKSYDA
                     LPANAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            complement(9712..10863)
                     /locus_tag="ACFJCW_000278"
     CDS             complement(9712..10863)
                     /locus_tag="ACFJCW_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HFC4150527.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQPDGLPNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTGSVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALDELQAVCDAFPDNEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPAVERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQIVKR"
     gene            11198..12577
                     /gene="norM"
                     /locus_tag="ACFJCW_000279"
     CDS             11198..12577
                     /gene="norM"
                     /locus_tag="ACFJCW_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HFC4150528.1"
                     /translation="MLLDLDRFSFSVFLKEIRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTGEAGETGRQGIW
                     FGLILGIFGMILMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGVATMAVFWFSALALW
                     IYIAKEKFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWVL
                     AVITVLSLVLFRSPLASMYNDDPAVLSIASTVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAVALVWCLEKYSM
                     ELVKSHEAV"
     gene            12621..13661
                     /gene="murB"
                     /locus_tag="ACFJCW_000280"
     CDS             12621..13661
                     /gene="murB"
                     /locus_tag="ACFJCW_000280"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HFC4150529.1"
                     /translation="MQPIRYRTDLTPYNTFGLHAQARAFIALKHADELRDIVRLPEFD
                     RDTVLWLGGGSNILLMQDYDGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHT
                     VALGLSGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAKVAELSAGREATAKDVS
                     DAVSAIRNSKLPDPKVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLANKNNASSDDIWKLAQHVCNTVFTRFQVELH
                     AEPNWLPASFSL"
     gene            13673..14323
                     /locus_tag="ACFJCW_000281"
     CDS             13673..14323
                     /locus_tag="ACFJCW_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HFC4150530.1"
                     /translation="MPVTRIAKTNTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVKLLTQLNGLNVINADQTAMNDLAVNMW
                     MVTKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHRAEYDRKIGNGNP"
     gene            14378..15154
                     /locus_tag="ACFJCW_000282"
     CDS             14378..15154
                     /locus_tag="ACFJCW_000282"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC4150531.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYRHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLNRTDAFQTALWRHHADKPVWFFLLPPSFLAHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDKARECDETAAPDPQTESARQILAAEQHLLDNGVPNIDILRLGG
                     LYCAERHPVSRLVQKQNIQGGNRPVNIVHRDIAVENLFQTASNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPAPDFSPDDSVGKIIRTVCDNGLSL"
     gene            15204..15770
                     /locus_tag="ACFJCW_000283"
     CDS             15204..15770
                     /locus_tag="ACFJCW_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HFC4150532.1"
                     /translation="MSALLPIINRLILQSPDSRSELTSFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAIRKILQGGEPGAGDIRLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQAGIGSRATDIGHGIKQIGRNIAEQIGGFSREPESANTGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            15790..16680
                     /locus_tag="ACFJCW_000284"
     CDS             15790..16680
                     /locus_tag="ACFJCW_000284"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HFC4150533.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGV
                     RECCIYTQDTDGCHIVNKTELGQYCDLVAVLGGDGTFLSAAREITPRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIREGKTAERALALNDAVLSRGG
                     AGQMIEFEVFVNQEFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQSFIDVQNLDRIIIRRYHNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            16705..17463
                     /locus_tag="ACFJCW_000285"
     CDS             16705..17463
                     /locus_tag="ACFJCW_000285"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC4150534.1"
                     /translation="MNSKISSDHTEDTIRLSKRMAQLGLCSRREADGHIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NCWEGDTSRISFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGDKLRPAKVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(17518..18183)
                     /locus_tag="ACFJCW_000286"
     CDS             complement(17518..18183)
                     /locus_tag="ACFJCW_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC4150535.1"
                     /translation="MTVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKLFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAVEKSLARYQAFQADDIKILDDSRALFDWCCRQTYIALANMMTGAAMA
                     GIDSCPVEGFNYADMERVLSGQFGLFDAAEWGVSVAATFGYRVQEIVTKARRPLEETV
                     IWA"
     gene            complement(18380..19153)
                     /gene="folE2"
                     /locus_tag="ACFJCW_000287"
     CDS             complement(18380..19153)
                     /gene="folE2"
                     /locus_tag="ACFJCW_000287"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HFC4150536.1"
                     /translation="MNAIADVQSSRDLRNLPINQVGIKDLRFPITLKTAEGTQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHTEVLDFAQLHRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVSLTGEMKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTSDAEVGIEEVIDYVETQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            19356..20513
                     /locus_tag="ACFJCW_000288"
     CDS             19356..20513
                     /locus_tag="ACFJCW_000288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HFC4150537.1"
                     /translation="MKFPTRAIHSGYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLRPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHNVKLVWLEMPSNPLLRLVDIKALAA
                     KAKAADALVGIDNTFATPYLQQPLDMGCDFAFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAIAGPTDCWLVLRGIKTLALRMEAHCKNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYALAQAQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMTSSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSIGIEDVDDIWNDISAALDTTL"
     gene            complement(20577..21578)
                     /gene="hemB"
                     /locus_tag="ACFJCW_000289"
     CDS             complement(20577..21578)
                     /gene="hemB"
                     /locus_tag="ACFJCW_000289"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HFC4150538.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHMLTADDLIYPVFVLE
                     GAAREEDVPSMPGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTGRAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGTQVVAPSDMMDGRIGAIREALEDAGHIHTRIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGGKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(21762..22046)
                     /gene="yhbY"
                     /locus_tag="ACFJCW_000290"
     CDS             complement(21762..22046)
                     /gene="yhbY"
                     /locus_tag="ACFJCW_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HFC4150539.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICNTLCEAVDAQPVRHIGKLLVLWRKNIEA"
     gene            22156..22776
                     /locus_tag="ACFJCW_000291"
     CDS             22156..22776
                     /locus_tag="ACFJCW_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HFC4150540.1"
                     /translation="MAVRSKSSKAWLHEHINDHYVHMAQKDGYRARAAYKLLEINEKD
                     KIIKPGTVLADLGSAPGSWSQVAAKLTGTSGTVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            22840..24807
                     /gene="ftsH"
                     /locus_tag="ACFJCW_000292"
     CDS             22840..24807
                     /gene="ftsH"
                     /locus_tag="ACFJCW_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HFC4150541.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIRQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIQTLLNKNVRVKVTPEEK
                     PSALTALFYSLLPVLLLIGAWFYFMRMQAGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQVA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREKTEAPAPADTASTESGQQPENKA"
     gene            25029..25460
                     /locus_tag="ACFJCW_000293"
     CDS             25029..25460
                     /locus_tag="ACFJCW_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HFC4150542.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMRVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            25453..25731
                     /locus_tag="ACFJCW_000294"
     CDS             25453..25731
                     /locus_tag="ACFJCW_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HFC4150543.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRTAALQSGLDGIFENLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            25784..26362
                     /gene="pth"
                     /locus_tag="ACFJCW_000295"
     CDS             25784..26362
                     /gene="pth"
                     /locus_tag="ACFJCW_000295"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HFC4150544.1"
                     /translation="MSNTIKMVVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIGHPGDRNLVVGYVLNKPSAEHR
                     RQIDDAVAKSLQAVPDILAGKWEEATRFLHSK"
     gene            26423..26629
                     /locus_tag="ACFJCW_000296"
     CDS             26423..26629
                     /locus_tag="ACFJCW_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HFC4150545.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            26626..26988
                     /locus_tag="ACFJCW_000297"
     CDS             26626..26988
                     /locus_tag="ACFJCW_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HFC4150546.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQILLLAKAFKTGKLPIPYRSLIAFAFCFAVGSECAQAWFTATRTGSLGDVLAD
                     LTGAALALFAARSACRPD"
     gene            27217..28632
                     /locus_tag="ACFJCW_000298"
     CDS             27217..28632
                     /locus_tag="ACFJCW_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC4150547.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDREKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFGSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIAASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            28752..29261
                     /locus_tag="ACFJCW_000299"
     CDS             28752..29261
                     /locus_tag="ACFJCW_000299"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC4150548.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSAGAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIESVSTKRHGYHDDVPTEP
                     VIIIKAEAV"
     gene            29429..30811
                     /locus_tag="ACFJCW_000300"
     CDS             29429..30811
                     /locus_tag="ACFJCW_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HFC4150549.1"
                     /translation="MASITRDIFKAYDIRGIVGKTLTDDAAYFIGRAIAAKAAEKGIA
                     RIAIGRDGRLSGPELMEHIQRGLTDSGIGVLNVGMVTTPMLYFAAVNECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIVEKDGFVAADKQGSVTEKDISGAYHDHI
                     VGHVKLKRPINIAIDAGNGVGGAFAGKLYKGLGNEVTELFCEVDGNFPNHHPDPSKPE
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLNRNPGAK
                     VIFDVKSTRLLAPWIKEHGGEAIMEKTGHSFIKSAMKKTGALVAGEMSGHVFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLDNLPQSISTPELNISLPEGSNGHQVIEELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQAAIERIQNRFKAVI
                     ESNPHLIWPL"
     gene            complement(30867..31622)
                     /locus_tag="ACFJCW_000301"
     CDS             complement(30867..31622)
                     /locus_tag="ACFJCW_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC4150550.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNARPLRIDFSKKTSKHDILALRRKSGMVFQQYNLFPHKTVL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLDAMKELAREGWTMVVVTHEIKFTLEVATNVVVMDG
                     GVIVEQGSPKELFDHLKHERTRRFLSQIQSAKI"
     gene            complement(31632..32348)
                     /locus_tag="ACFJCW_000302"
     CDS             complement(31632..32348)
                     /locus_tag="ACFJCW_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC4150551.1"
                     /translation="MFNNFLASLPFMTETRADMLISAFWPMVKAGFTVSLPLAIASFV
                     IGMIIAVAVALVRIMPSGGIFQKCLLKLVEFYISVVRGTPLLVQLVIVFYGLPSVGIY
                     INPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            complement(32338..33165)
                     /locus_tag="ACFJCW_000303"
     CDS             complement(32338..33165)
                     /locus_tag="ACFJCW_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4150552.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAISGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDSNIKSIADIKGVKTA
                     QSLTSNYGEKAKAAGAELVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            33450..34358
                     /locus_tag="ACFJCW_000304"
     CDS             33450..34358
                     /locus_tag="ACFJCW_000304"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HFC4150553.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALSA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFPEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDETIREVAI
                     IPEGLPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRSKETDDEFSRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            34435..38037
                     /gene="recB"
                     /locus_tag="ACFJCW_000305"
     CDS             34435..38037
                     /gene="recB"
                     /locus_tag="ACFJCW_000305"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HFC4150554.1"
                     /translation="MSAPIRAFDPLTAPISGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKSVERVLVVTFTKAATADLKTRLRARLDDVLQVLESKEIAELGDDTLSDGIAAYCAE
                     HHEGDTFLPALLEQALQKESRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLVPAQDFWRERVSGDPVLAALAFKRKAVPQTVLAQIRAYLSR
                     PYLNFRRPQADLKQAQRDAETSWQTVCRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHERLLKLSSDKLEAGLKKGKTPDAAVFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIEYLNSSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWEIALIDEFQDTDPLQYEIFQKIFIARNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAEDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPKRPAVQLRWLHENDNEKANKDVLRRRAADYCADEIARALNEASGGRLNFKGRPLQ
                     SGDIAVLVRTHNEAVMISAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDIWQKYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNGGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQGANRAELLAK
                     AQLSESEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSSDTADNPLAYLIEGLPQ
                     DSRETVRRTYACEKDGITMLKRNWRRVADNAPAGTDFAFTEDAPPPAAYRGNADQAAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAEQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYGLSDIPPGCRRPEMGFTLHTEDFGLKRLRDWLARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFIDMVCQDPDGNICIIDYKSNHLSAYTRQAMDEAVAHQHYYL
                     QALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK"
     gene            38076..38435
                     /locus_tag="ACFJCW_000306"
     CDS             38076..38435
                     /locus_tag="ACFJCW_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC4150555.1"
                     /translation="MNIKQLITAALIASAAFATQAAPQKPVSAAQTAQHSAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIYEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            38560..39039
                     /locus_tag="ACFJCW_000307"
     CDS             38560..39039
                     /locus_tag="ACFJCW_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HFC4150556.1"
                     /translation="MKHILPLIAASALCISTASAHPAGKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMDIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRTAYTDTRALIVGSRISFDEVANTLANAEKLIQKTVGE"
     gene            complement(39314..40693)
                     /gene="radA"
                     /locus_tag="ACFJCW_000308"
     CDS             complement(39314..40693)
                     /gene="radA"
                     /locus_tag="ACFJCW_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HFC4150557.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESFAAPEPK
                     NARFQSWAADTSTVQSLSAVTAAEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRSQRLELHAEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLSVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPMPEKTVVF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIHGVSSLQEA
                     IDICRDSRE"
BASE COUNT         9361 a        11801 c        10468 g         9080 t
ORIGIN      
        1 tcgaattcaa taatacctct tgatttaacg ataatagaag gctctctatg gatatcctta
       61 tcaggaacat catcaaagtc aactaatgca aaagtttttc ctcctgcaaa aatctttaac
      121 ggcgcattat ctttatgcat ttctttcatt tgtccagcag ttatcttagt tccttttgta
      181 cgaactaaaa cctcccccaa tggcttccac tccaccggtg ccgtctgaat catctcaatc
      241 aattttttcg ctttgctttg catatccatg gttgttttcc gtttccttcc cgctgcggcg
      301 ggatgtgggg cggttgcggg gcgggtttcg gctcactctg tccgtttgcc gttgtttctg
      361 cgggctgaaa cccgtcctgc tttcaggctg cctgaaatcg tgtgcaggct gctttttcag
      421 gtagcctgaa tgcggttatt ttttgccgtt ttgatgctgt tcggttgcgg caagcctttt
      481 ctgttcttcg ttctcaagct gtttgatgct tttctcgggt acgggctggt tttcaggcat
      541 gatgccgccc agttcttcaa tggtttggcg cactttttgt ccgacttcga aatgcacccg
      601 gtttgcctgt gttttgcctt ggatgttttt gcggcgtagt ttttcttcgg tttgcgtggc
      661 gcgaaacaga ttggcagccg gttcgctggc gttcatgtgg tctaggattc tctggctttt
      721 cttcaagcct ttgcggctgt gtatgccctg cttgtccagt cctccgtata gcccccgata
      781 gccgtggttt tggaagacgg cgtactcaac gggtttttct acgcctgcat ccttggctgc
      841 ggcggcaagg tcggtattgt gttcgcgcag ctgcctgcga agcagcaggc gttgtttgtc
      901 ttcgcccaaa ctcctgaatg ctgcctcgtc ttgcagctct tggcggcggg cttgcacggc
      961 aaagtaggtt tgccctgcgg caatgacgct tttggacgga tcgccgtttt gcacaatcag
     1021 gtagcaggca tagcgggaaa ggcggtaatc cgccacttcg cgctgcccgc ctttcccaag
     1081 ggctatcatt ttgttggttt caacaaaatg atgatttttg tcatttcctg atgtttcgca
     1141 agcggttatg gctttatcaa tggcccgttg gaaattgcgc cattcggaat attccaagat
     1201 ttgctgcaag gtgcgcgccg accaatattc attgcctgtt tcgtcgatgt gtttggcgtt
     1261 ttcaaaagcg ttattttctg ttgtcatgta ttttccccga aaatttcttg atttgaactt
     1321 gtaaggattg cttacaggtt gccgcccgta ttttcagacg gcctctttcc cattcagttg
     1381 ttgcaaaata tgcaacaact gcctaggttt caatctctgc aatcacttcg tcaatttcac
     1441 gccgcagccg ttcgattttg gcgacggttt cgctgatttc ggcgttgagc tgtctgatgt
     1501 cgatgacctc gcgggtgtct tcggcttcga catagctgct gacggcgagg ttgtagccgt
     1561 tgtctttgac ggtttgctgg gcggcgtttt gggcgatatg cggcacatcg gctttgtcgg
     1621 cgaagagttt gacgatttcg gcaatgtgtt cttcggttaa gacgttgttg ttggtttctt
     1681 ttttaaagaa gccgcctgca tcgatgaatt ggatgtcggt attgtctttg tgtttggaca
     1741 aaaccaggat attgacggcg atgcaggtgc cgtaaaagag attgggcgca agggcaatca
     1801 cggtttccac atagttgccc tccaccagat attggcggat tttctgctct gcgccgccgc
     1861 gatagaaaat gccggggaat gagacgatag cggcgcggcc tctgccggaa aggtagttca
     1921 gtgcgtgcag gatgaaggca aaatcggctt tggatttcgg tgcgagtacg cctgcggggg
     1981 caaagcggtc gtcgttgatc aaggtggggt cgtcgctgcc tatccagtcg atggaatagg
     2041 gcggattgga gacgacggca tcaaagggtt tgctgtcttt gagtttgggg ttggtcagcg
     2101 tgtcgcccaa ttcgatgtgg aatttgttgt aattgacgtt gtgcagaaac atattcatgc
     2161 gggcgaggtt gtaggtggtg tggttgattt cctgcccgaa gaagccttct tcgatgatgt
     2221 gttcgtcaaa ctgttttttc gcctgcaaga gcaggctgcc cgagccgcag gcggggtcgt
     2281 agattttgtt gactttctcc tgcccgtgca ccgccagccg cgcaatcagc ttggagacgc
     2341 tttgcggggt gaaaaattcg ccgccggatt tgcctgcgtt ggcggcgtag ttggaaatca
     2401 ggtattcgta ggcatcaccg aaaaggtcga tgcggtggtc ttcaaaattg ccgaaatcga
     2461 gttccgccac gcctttaagg acggcggcaa ggcgtttgtt tttgtcggca acggtgctgc
     2521 cgagccggct gctggtggtg tcgaagtcgt caaacaagcc tttgatgcct tgttcggacg
     2581 ggtagccgga ggcggagctt tcaatcgcgg taaagatttc tttcagcttg gtgttgagct
     2641 cttcgttttg atgggcttcg gcggcaatat tgcaaaaaag ctggccgggg tagatgaaat
     2701 agcctttgac tttgacggca tcgtctttga tttcgggcgt gatgatgctg tccggcatag
     2761 cggcgtaatc aatgctgctg tcgccggcct gcatatagtc ggtgaagttt tcgctgataa
     2821 agcggtagaa aagtgtgccg agaacgtatt gtttaaagtc ccagccatcc accgcgccgc
     2881 gtacttcgtc ggcgattttc caaatttggc ggtgcagttg ggcgcgttgt tgcatttcgg
     2941 tcatcatcga aatccatata taaagttaaa caaatcaaaa tcgcctgata ttttcagacg
     3001 atttttttac gggcattcaa attaagccaa attttccagc atccatttga cgtagcggtt
     3061 gacacctgct ttgacatcga aaaattcttc cttatatccg gcttcgcgca atttggtgat
     3121 gtcggcttgg gtgaagccct ggtatttgcc tttgagcgcg tcgggaaagg ggatatagcg
     3181 gataagttct tcttctacca actctttcaa gctcaattca gatttgcctt cggcggcgcg
     3241 gcaggcgttg acggcggcgg cggcgagttc gttgaactgt tggctgcggc cggtgccgag
     3301 gttgtagatg ccggaaagtt cgggatggtc gaagaagtag aggttgattt tggcgacgtc
     3361 ttcgacgctg acgaagtcgc gggtttgttc gccgttgccg tagccgtcgt tgctgccgaa
     3421 caggttgacg taaccgtgtt cgcggtattg gtggaaatgg tggaaggcga cggatgccat
     3481 gcggcctttg tgttgttcgt gttgtccgta aacgttgaag tagcggaagc cgacgacttg
     3541 ggcggtgaga ccttctttca tgcggcggcg caatacttgg tcaaacagga atttggagta
     3601 gccgtacaca ttaagcggtt tttcgagttc gcgctcttcg cggaagattt cgcctttgcc
     3661 gtaaaccgcc gcactggagg cataaaggaa ggggatgcgt tcgtcctgac accagtccaa
     3721 caaatccagc gtgtactggt agttgttttc catcatatac aaaccgtcgt ggttcatcgt
     3781 atcggaacac gcgccttgat ggaaaacggc ttcgatgttt tgataaggta aaatgtgttc
     3841 cctcacttgg cggataaatt cgtgtttgtc gaggtagtgg gcgatttcgc actcggcaag
     3901 gtttttgaat ttttcgcctt ttgtcagatt atcgacggcg acgatgtcgg taatgccgcg
     3961 ttggttgagg gctttgacga tgttgctgcc gataaagccg gccgcgcctg ttacgatgat
     4021 ggtcatattc ggtttccttt gttttgaggg tttcagacgg cattggatgg tcatgccgtc
     4081 tgaaaagatt tattgcccgt ccagtgcttc aaccaactct gcaaacgagc aaaccgccgt
     4141 accgagtttc gccacgacaa ccccggccgc agtattggca aggtacatgg cttcgggcat
     4201 ggtgcagcct gccgccagcc ccaagcccat tccggcaatg acggtgtcgc ctgcgccgga
     4261 cacgtcgtaa acttcttggg cgcgggtggg ctggtaaatg ggttcgcctt cgctgaacaa
     4321 ggtcatgccc tcttcgctcc gggtcagcaa aacggcggtc aagtcgaggt ggcggcgcag
     4381 gttttgcgct ttttcggtca gatcgccttc gtttttccaa ctgccgacca cttctttcaa
     4441 ttcggcgcag ttgggcgtaa tcagagttgc gccgacatat ttttcgtaat cgtcgccttt
     4501 ggggtcgatt aagacggttt tgccgacatg tttcgcccaa tcgatcatat cggagatatg
     4561 cgacagaccg cctttgccgt agtccgaaaa aatgattgcg tcgtattcgg gcaagatttc
     4621 acggtatttc cgcttgattt gttccaacac ttcgcggttg ggatgttctt caaaatcaag
     4681 gcggataagc tgctggttgc gggcgacgac gcgcagtttg acggtggtgg cgatttgttt
     4741 gtcgcgcatc agataggagg cgacgccgtc ctgcaccatc agcgcgtcga gcgcggcggc
     4801 ggcttcgtcg tcgccggtta cggacaacag ccctgccctg ccgcccaacg aagcgatgtt
     4861 gcgcgcaacg ttcgccgcgc cgcccgcccg ttggtcgatt cgtccgattt ttgccaccgg
     4921 cacgggtgct tcgggcgaaa ttcgggacac gtcgccaaac caatagcggt cgagcatcac
     4981 gtcgccgaca acaagaactt tggcttgtgc gaaacgggat ttgagggttt cttgttggaa
     5041 cttggcgggc atattgcctc cgttgtgttt tgttcagaca accttaacct gtaagaccgc
     5101 ctgaaaatca gtttgcttca aggtttgcca cgcggttcac ttcgcgcaat acggcgaccg
     5161 gatcggcggc tcgggtaacg gggcggccca tcaccagata agtcgaaccc gccgccaagg
     5221 cttcggcggg tgtcataatg cggcgttggt cgtcgttgtt gccggcaacg tccaagcgga
     5281 tacccggtgt aaccaagaca aaatcccgtc ccaattcgcg gcgcagcggc gcggcttctt
     5341 gggcggaaca gaccacgccg tccaagcccg aactttgtgc cagttttgcc aaacggatga
     5401 cttgttcttc aggggcggtg ttcaaaccga tttccgccaa atcgctttgc tccatgctgg
     5461 tcaacacggt tacgccgatt aagagcggtt tcgtgccgta tccggcaacg gcttcggcgg
     5521 cggcttccat catacgtctg ccgcccgacg cgtgcatatc gaccatccac acgcccatat
     5581 cggcggcgac tttacacgcc tgcgcgacgg tgtggggaat atcgtggtat ttcaaatcaa
     5641 gaaagagttt gaaaccctga tgaatcaggc tttccgccaa actgcgcccc gtagcggtaa
     5701 acagctcttt gccgattttg atttggcaca acgccggatc aaggttgcgg acgaatccga
     5761 gcgtgtcttt ttcgttggca aaatcaaggg caacgatgac gggggtacgt tgttgcggag
     5821 tttggaagtc ggtgattaaa ggattcatgg tgttttcgtt tcgggttttc agacgacctt
     5881 tatcgtcttt ttcgcagtat agcggattaa caaaaaccgg tacggcgttg ccccgccccg
     5941 gctcaaaggg aacggttccc taaggtgccc aagcaccagg cgaaccggtt ccgtactatc
     6001 cgtactgtct gcggcccgcc gccttgtcct gatttttgtt aatccgctat aacaacgtaa
     6061 attcaaaccg taggccgggc attgatgtcc gacctacgcg gactcaagcc cccgacaaac
     6121 tgtttcggat aaatttgaac cggtacatca gccgtcattc ccgcgcgggc gggaatccat
     6181 tgataaaact cagtttatca gatttaaaca gcgattgccc aaattcagaa atggattccc
     6241 gcctgcgcgg gaatgacgcc gaatgattat ttttcggttg caacacgctg tttatcaaaa
     6301 acaggtcgtc tgaaaacctg attttctgtt ttcagagtgc gaagcctgcc cgtgggtacg
     6361 accttttcga tttatttgcc caatgcgccc aatacttcgg ctttcacagc ttctactgct
     6421 tgggtaccgt cgactttgat gtatttcggc gcgtgttcgc cttccagctt gctgtaaaaa
     6481 tcaaccaaaa cttcggtttg ctcgtggtaa acggcaagac gttttttcac ggtttcttct
     6541 ttgtcgtcgt cgcgctgaat caaatcttcg ccggttacgt cgtctttgcc ttcggtttta
     6601 ggcggattgt aggtaacgtg gtaagtacgg ccggaagcca aatgcacgcg gcggccgctc
     6661 atgcggtcga caatcacgct gtcggatacg tcgatttcaa cgaccgcgtc caaacccacg
     6721 cctgcttcca ccatcgcttc ggcttgcgcc aatgtacgcg ggaaaccgtc gaacaggaaa
     6781 ccgtttttgc agtcgtcttg cgcgatgcgt tctttgacca tgccgataat gatgtcgtcg
     6841 cgcaccaaac cgccttcatc gatgattttt ttcgcttcca aacccaaggg cgtgcctgcc
     6901 ttaatcgcgg cacggagcat gtcgccggta gagatttgcg gaatgccgaa cgcggcggtg
     6961 atgaattgcg cctgagtgcc tttgcccgcg cccggtgcgc ctaaaagtaa tgctttcatg
     7021 aagtgatcct tttaaatgtg tttattggaa tcaaacagat ggtttacgat tctacacggc
     7081 ttggcgcaat agttcaaaaa ccaactgcac aaactgccat ttgcaagcaa atgttttgca
     7141 tacctttgcc gagcctgata ttcacaaggc ggcaactttt tgggacaatc cccaaagttt
     7201 caaaacatca caccctacca aaaaggaaca tccgtgaaac gcatttttct gtttttggct
     7261 accaatatcg ctgttttggt cgtaatcaac attgttttgg cggttctggg catcaacagc
     7321 cggggcggcg cgggcagcct gttggcgtat tccgccgtcg tcggcttcac tggttcgatt
     7381 atttcgctgc tgatgtccaa atttatcgcc aaacaatcgg tcggtgcgga agtcatcgac
     7441 acgccgcgca ccgaagaaga agcctggctt ctgaacactg tcgaagccca agcgcggcaa
     7501 tggaacctga aaacgccaga agtcgccatc taccactccc ccgaacccaa tgcctttgcc
     7561 acgggcgcat cgagaaacag ctccctgatc gccgtcagca ccggtttgct cgaccatatg
     7621 acgcgcgacg aagtggaagc cgtgttggcg cacgaaatgg cgcacgtcgg caacggcgac
     7681 atggttacgc tgacgctgat tcaaggcgtg gtcaatacct ttgtcgtgtt cctgtcgcgc
     7741 attattgcca acctgattgc ccgaaacaac gacggcagcc agtcccaggg aacttatttc
     7801 ctagtcagca tggtattcca aatcctgttc ggcttccttg ccagcctgat tgtcatgtgg
     7861 ttcagccgcc aacgcgaata ccgcgccgac gcgggcgcgg caaaactggt cggcgcaccg
     7921 aaaatgattt ccgccctgca aaggcttaaa ggcaacccgg tcgatttgcc cgaagaaatg
     7981 aacgcaatgg gcatcgccgg agatacgcgc gactccctgc tcagcaccca cccttcgctg
     8041 gacaaccgaa tcgcccgcct caaatcgctt taaaccgatt tgaaacgaca aaaaaccgta
     8101 cgcacaagca gtacggtttt ttcgtatatg ccgactgaaa acatcaggtt tccataccgg
     8161 caccaaccgt atccatttcc gcaccggata cgccgcattg atatatcccc gacaaaccgt
     8221 gtccggacag aaaatatcag ataaaacagc ggtaaaaatg ccgtctgaaa ccaattaggg
     8281 cttcagacgg catttttact gcaaaacctt atgcgaacgg atgatgcagc acaatcgttt
     8341 cttcgcggtc ggggccggtg gagacgatgg cgaccggcgc gccgcagact tcttcaatcc
     8401 gtttcaaata tgctttggca ttggcaggca atgcgtcgta gcttttcacg ccgacagtcg
     8461 attcgcgcca gccgggcatg gtttcgtaaa tcggtttgca ggtttccacc gcatccgaac
     8521 cgcaaggcag gatgtcggtt ttgccgccgc ctggcaattc gtagccgacg cagatattga
     8581 tggtttcaac gccgtccatt acatcgagtt tggtaatgca cataccggaa atgccgttga
     8641 tttggatgga gcgtttcagg gcggcggcat caaaccagcc gcagcggcgc gcgcggccgg
     8701 ttaccgaacc gaattcgtgt ccgcgctccg ccaaacctgc gcctacttcg tcgaacaatt
     8761 cggtcgggaa cggacccgaa ccgacgcgcg tggtataggc tttgacgatg cccaaaacat
     8821 aatccagcat ttgaggacct acgcccgcgc ctgccgaagc cgcgccggcg agacagttgg
     8881 acgaggtaac gaaggggtaa gtgccgtagt cgatgtccaa caacgcacct tgcgcgcctt
     8941 caaacagcag tttttcgccg tttttgtttt tttcgttcaa cacgcgggac acgtcggcaa
     9001 tcatcggcgc aatgcgcggc gcgacttttt cgataaccgc catcacgtct tccgctttaa
     9061 ccggtccggc gttgtgcagg tattggagtt ggacgttgta ataggcaagg acggcatcca
     9121 gtttttcacg cagtttttca ggatgcagca aatcggcggc gcgaatggcg cggcgtgcca
     9181 ctttgtcttc gtaggcaggg ccgatgccgc ggccggtcgt gccgattttg cctttgccgc
     9241 gcgatgcttc gcgggcttgg tcgagcgcga tgtggtaagg caggatcagc gggcaggtcg
     9301 gcgcgatttt cagacggcct tcgacgtttt tcacgcctgc cgcgttcaac tcgtcaattt
     9361 cgcccaacag ggcttcgggg gaaacgacaa cgcccgaacc gatgaagcaa tccaatcctt
     9421 cgtgcaggat accgctcgga atcaggcgca aaatggtttt tttgctgccg acgaccaagg
     9481 tatggcccgc attgtggccg ccttggaagc gcacgacgcc gccggcttct tccgccagcc
     9541 agtcaacgat tttaccttta ccctcgtcgc cccactgtgc gccgattact acaacatttt
     9601 tagccatagc catataacct atcgatatta aaaattattg cggaaaatcc ccaaaccggt
     9661 gcggctttgc gccccgcccc ggtttgcctt tcatccgcta tgaacgggta tttagcgttt
     9721 cacgatctgc caaacgccgt ccgtcttttt cagacggcct gcaagctctt ccgaaacatt
     9781 gtgtccgata ccgtagtcaa tcacgacaca ctgcccttgt tcacgcaagg cttcgaccgc
     9841 ttcgcgcgcc gcttctgcat cttccgcatc gaccaacacg gcgggctgcc gttcgacggc
     9901 gggcaaacgc ccgataaagc tgcgtaagtc gaaactgaat cccgttgccg ggcgcgccct
     9961 gccgaaatat ccgcccaatc cgtcataacg cccgccgcgc gcgaccgcgt cgtggaaatc
    10021 ggcggcatag gcggcataca gcaagcccgt gtggtaattg tcgacgcgca gctcggacaa
    10081 gtcgatatgg atttcattat cggggaatgc gtcgcacacc gcctgcaatt cgtccaacgc
    10141 gccgccgacc gccgacaaat ccggcaaccg tccgcgcgcg tcggacaaca cttcacgccc
    10201 gccgtacagg cgcggcagca acgagaatgc ttttgcccac ataccgtcca gcttccaagc
    10261 cttgacctgc gcttcgaccg acccggtatc tttatcctgc atcaaggcaa gcagcgttgc
    10321 ggactgcccc gcatccaaat gcgccgcatc ggacaaggcg cggaatatgc cgatatgccc
    10381 cagcgaaagc agcactttgc ccatatcggc aattttcatg cttttcagca taaggtctat
    10441 cagctcgatg tcgccacgga tgtcggcaaa accgtacatt tccgcccctg cctgcaaggg
    10501 ttcgcgcata ttcggcagac cgtcgggctg cgcgtgcaac accggaccgg cataacacaa
    10561 ccggttaatc ccttggttgg cggacaaaag atgggcatcg atacgcgcca cctgcggcgt
    10621 gatgtcggcg cgtatgccca actgcctgcc gctgagcctg tccgttacca aaatggtttt
    10681 cagtgaaagc cccgcatcga tatgcgtcag cagggaatgt gcgtactcca tcagcggagg
    10741 ctgtaccagt tcataaccgt gtacgcggaa cagtgccaac aactgctcgc gcgcgctttc
    10801 aagctgccgc gcgttcgtgg gcagtacgtc ggcgatatgt tccggaagct gccatgtctg
    10861 catgagaatc tgccttctgt tttatcctgt aaacacaaaa gactgcccga tccgcaatca
    10921 gacggcatct ttgccgcaac gcatcacgcc gctgtcaaaa cggcgatgct tccttccgat
    10981 tcagaatccg aacagcccct gtccgacggc tcaatgccgt caagtcgtta aaaccaaact
    11041 ttaccataaa atacacacaa tctgaatata cttttatacc ccgtatccgc cgtctgacgg
    11101 cacggtattt tttactatat aatgtgcacc attatttctc atcacttccc gctgccgttt
    11161 ttttgtttca gacggcattt ttattgactg aacacttatg ctgctcgacc tcgaccgctt
    11221 ttccttttcc gtcttcctga aagaaatccg cctgctgacc gcccttgccc tgcccatgct
    11281 gttggcgcag gtcgcgcagg tgggcatcgg tttcgtcgat accgtgatgg cgggcggtgc
    11341 gggcaaggaa gatttggcgg cggtggcttt gggcagcagc gcgtttgcca cggtttatat
    11401 tacctttatg ggcattatgg cggcgctgaa cccgatgatt gcccagcttt acggcgcggg
    11461 taaaaccggt gaagcaggcg aaacggggcg gcaggggatt tggttcgggc tgattttggg
    11521 gattttcggc atgattttga tgtgggcggc gattacgccg ttccgcaact ggctgacttt
    11581 gagcgattat gtggaaggca caatggcgca gtatatgctg ttcaccagct tggcgatgcc
    11641 ggcggcaatg gtacaccgcg cactgcacgc ctacgcttcc agcctgaacc gcccgcgcct
    11701 gattatgttg gtcagctttg cggcgtttgt gttgaacgtg ccgctgaact atattttcgt
    11761 ttacggcaaa ttcggtatgc ccgctttggg tggcgcaggt tgcggcgtgg cgacaatggc
    11821 ggtgttttgg ttcagcgcgc tggcattgtg gatttatatc gccaaggaaa aattcttccg
    11881 cccgttcgga ctgacagcga aattcggcaa accggattgg gcggtgttca aacagatttg
    11941 gaaaatcggc gcgcccatcg ggctgtctta ttttttggaa gccagcgcgt tttcgtttat
    12001 cgtgtttttg attgcgcctt tcggcgagga ttatgtggcg gcgcagcagg tcggcatcag
    12061 tttgtcgggg attctctata tgattccgca aagcgtcggc tcggcaggga cggtgcgcat
    12121 cggcttttcg cttgggcggc gcgaattttc gcgggcgcgt tatatttcag gagtatcgct
    12181 ggtgtcgggc tgggtgctcg ccgtgattac cgtgctttcc ttggtattat tccgttcgcc
    12241 gctggcaagc atgtacaacg atgatccggc agttttaagc attgcctcca ccgtcctgct
    12301 gttcgccggc ctgttccaac cggcagactt tacccaatgt atcgcgtcct atgccctgcg
    12361 cggctacaaa gtcaccaagg tgccgatgtt catccacgcc gccgccttct ggggctgcgg
    12421 cctgctgccg ggctatctgc tcgcctaccg tttcgatatg ggcatttacg gcttctggac
    12481 ggcattgatt gcctcgctca ccatcgcagc cgtcgccttg gtgtggtgct tggaaaaata
    12541 cagtatggag ttggtcaaat cacacgaggc cgtctgaaaa cgcagcacac ttcaattcaa
    12601 atacagttaa agctcaaacc atgcaaccca tccgataccg aaccgacctc accccctaca
    12661 acactttcgg cctgcacgcc caagcccggg cctttatcgc gcttaaacac gccgacgaat
    12721 tgcgcgacat cgtccgactg cccgagttcg accgcgatac tgttttatgg ctgggcggcg
    12781 gcagcaacat ccttttgatg caggattacg acggcttggt cgtccatatg gaaaacaagg
    12841 gcatacgcga gattgcgcgc tcagacggca tggttctgat tgaagcgcag gcgggcgaaa
    12901 tttggcacga tttcgtgttg cacaccgtcg cgctgggttt gagcggtttg gaaaacctga
    12961 gcctgattcc gggtacggtc ggcgcgtcgc ccgtgcagaa catcggcgca tacggcgtgg
    13021 aggcgaaaga tgtgattcac agcgtgcgct gcttcgattt ggatacggaa acctttgtaa
    13081 ccctttccaa tgccgactgc cgcttcgcct accgcgaaag cctgttcaag caggaaggca
    13141 aagggcgtta tgtgattgtt tcggtcgtat ttgcattaaa aacgcatttt gtgccgaact
    13201 tgggctacgg cgatttggcg gcgaaggttg ccgaattgag tgcaggtagg gaggcgacgg
    13261 cgaaagacgt ttccgatgcg gtatccgcca tccgcaacag caaattaccc gacccgaaag
    13321 ttttgggcaa tgtcggcagt ttctttaaaa accccgtcgt cagcgcggaa aaagccgcca
    13381 ccctgttgca gcggcatccc gatatgccgc gctatccgca gcccgacggt tcggtcaaac
    13441 tcgccgccgg ctggctgatc gaccaatgcc gtctgaaggg cttccaaatc ggcggtgcgg
    13501 cggtacatga ccggcaggct ctggttttgg cgaacaaaaa caatgcctct tcagacgaca
    13561 tctggaaact ggcgcaacac gtctgcaata cagtatttac tcgatttcag gtagaattac
    13621 acgccgaacc caattggctg cccgcttcgt tcagcctgta aatccaagga gtatgcccgt
    13681 gacccgcatt gcaaaaacca atacttacac ccgcatcatc gacgccagcc ttgcgctttt
    13741 caacgaggaa ggcgagcgca acatcagcac caaccatatt gccgcccact tgggcatcag
    13801 tccgggcaat ctctattacc acttccgcaa caaagacgaa atcatcgtcc aactgttcaa
    13861 acgttacagc gaagccctgc tggaatacct caacgaagcc gtgttgccct ctgatgtgga
    13921 agactctatc aactatatgg caggcattta cgatgtcatg tgggaatacc gcttcctctt
    13981 tagcgacgta aacaccctgc ttgcgcgcag tgccgaattg ttgggcgaac acaatacctt
    14041 tacccaagcc aaagtctcgc cgcttctagt caaactgctg acccagctca acgggctgaa
    14101 cgtcatcaac gccgaccaaa ccgctatgaa cgacctcgcc gtcaatatgt ggatggttac
    14161 gaaatactgg ttcgacttcg acagttccct gcgcggccgt accaagctga ccgaagactc
    14221 caaagcacgc ggcgtccgtc gtaccttaag cctccttcgc ccctatcttt tgcccgaaca
    14281 ccgcgcggaa tacgaccgca aaatcggcaa cggcaacccg taaacccata acgtccgaat
    14341 cagccttcag acggcactta cccgacggta tcagcgaatg cgcgcagtcc ccccgcccca
    14401 tatctccatc acaggcctag gttacctcgg cctgccgctg gcacaaaagt tttaccgaca
    14461 cggcagccgc gtcgccgcca taaaacgcag cctgacttcg gacgacatca acctgcccat
    14521 acacctcgac accttcgacc tcaaccgtac cgatgccttt cagacggcat tgtggcggca
    14581 tcacgccgac aaacccgtct ggttcttcct gctgccgccc tcctttttgg cgcattacgc
    14641 cgacaccgtc aaacaatggg cagagcttgc ccgggcgtgc aacgtgcaac acctgatttt
    14701 cacaagcagc acaagcgttt acggcgataa agcgcgagaa tgcgacgaaa ccgccgcacc
    14761 cgatccgcaa accgagtccg cccgacaaat ccttgccgcc gaacaacacc tgctcgacaa
    14821 cggcgttccg aacatcgaca tcctgcggct gggcgggctt tattgcgccg aacgccatcc
    14881 cgtcagccgc ctcgtgcaaa agcaaaacat ccaaggcggc aaccggcctg tcaatatcgt
    14941 ccaccgcgac atcgccgtcg aaaacctgtt tcagacggca tccaaccccg gcggcaggcg
    15001 gctgaaaaac attatcgaac cgcgccaccc gacacgccgc gaattttata cggaagaagc
    15061 cgccaaactc ggcctgcccg cgccggattt ctcacccgac gacagcgtgg gcaaaatcat
    15121 ccgtaccgtt tgcgataacg gcttaagcct gtaaaataag cggcaacagc aacaacaggc
    15181 attctccgcc ccaatcagaa aatatgtccg ccctcctccc catcatcaac cgcctgattc
    15241 tgcaaagccc ggacagccgc tcggaactta cctcctttgc aggcaaaaca ctgaccctga
    15301 acattgccgg gctgaaactg gcgggacgca tcacagaaga cggtttgctc tcggcgggaa
    15361 acggctttgc agacaccgaa attaccttcc gcaacagcgc gatacggaaa atcctccaag
    15421 gcggcgaacc cggggctggc gacatcaggc tcgaaggcga cctcatcctc ggcatcgcgg
    15481 tactgtccct gctcggcagc ctgcgttccc gcgcatcgga cgaattggca cggattttcg
    15541 gcacgcaggc aggcatcggc agccgtgcca ccgacatcgg acacggcatc aaacaaatcg
    15601 gcaggaacat cgccgaacaa atcggcggat tttcccgcga acccgagtcc gcaaacaccg
    15661 gcaacgaagc ccttgccgac tgcctcgacg aaataagcag actgcgcgac ggcgtggaac
    15721 gcctcaacga acgcctcgac aggctcgaac gcgacatttg gatagactaa ccttcagacg
    15781 gcatccgaca tgaacagccc ttttcacaac atcggtatcg taacccgccc caacacgccc
    15841 gacatccaag ataccgcaca cacgctgatt acctttttga agcagcacgg ctttaccgtc
    15901 tatctcgacg aagtcggcgt aagggaatgc tgcatctata cccaagacac cgacggctgc
    15961 catatcgtca acaagaccga actggggcaa tactgcgacc tggtcgccgt cttaggcgga
    16021 gacggcacct ttctctctgc cgcccgcgaa atcacccccc gcgccgttcc gattatcggc
    16081 atcaaccaag gtcatttggg ctttcttacc caaattcccc gcgaatatat gacggacaag
    16141 ctattgcccg ttttagaagg aaaatacctt gccgaagagc gcatcctgat tgaagccgca
    16201 ctgatccgcg aaggcaaaac cgccgaacgc gccctcgccc tcaacgatgc cgtcctctcc
    16261 cgcggcggtg ccggacagat gattgaattt gaagtcttcg tcaatcagga attcgtctat
    16321 acacaacgtt cggacgggct gattgtctcc acccccaccg gatcgaccgc ctattcgctt
    16381 gccgccggcg gcccaatcat gcaggcagga ttacacgcct tcacgctcgt ccccatctgc
    16441 ccgcaatcta tgactaaccg ccccatcgcc attccagaca cgtccgaaat cgaaatcctc
    16501 gttacccaag gcggcgacgc gcgcgttcat ttcgacggac aatccttcat cgacgtgcaa
    16561 aacctcgacc gcatcatcat ccgccgctac cacaatccct tacgcatcct acacccgacc
    16621 gactaccaat atttcaaaac cctgcgccaa aaactgcact ggggcgagca attagtctaa
    16681 gccggccttc acccgaaagt acccatgaat tccaaaattt cctccgacca tacagaagat
    16741 accatacgcc tctccaaacg tatggcacaa ctggggcttt gttcgcgccg cgaagccgac
    16801 ggccatatcg aacagggctg ggtaacggtc aacggcaaaa ccgccgtact cggtcagaaa
    16861 gtttcaccgg cagaccgtat cgaactgaac aagaaagccc acgaacagca ggcggcacgc
    16921 attaccatcc tgctgaacaa acccgtcggc tatgtcagcg cacaagcgga aaaaggctat
    16981 aaatccgccg ccgaactgat tacccctgaa aattgctggg aaggcgacac cagccgcatc
    17041 agtttcgatc cgaaacacaa aatcggtctt gcccccgccg gcaggctcga tatcgattca
    17101 gtcggattgc tggtgttgac gcaagacggc cgtatcgcca agcagcttat cggcgaaaac
    17161 agcggcagtg aaaaagaata tttggtgcgc gtgcgcggca aattggacga aaaaggactt
    17221 gccttactga atcacggatt gagtttggac ggtgataaac tgcgtcccgc caaagtagaa
    17281 tggcaaaatg aagaccaact gcgcttcgtg ttgaaacagg gtaaaaagcg gcaaatccgc
    17341 cgtatgtgcg aactggtcgg actgcgcgtc gtcgggctga aacgcatccg catgggcaag
    17401 gtcaaactcg gcaggctgcc gcccggcaaa tggcgttatc tcgctcctgg cgaatcgttt
    17461 taaataagca ttaaaaaatg ccgtctgaaa atccttgcgt tttcagacgg cactgcctta
    17521 tgcccaaata acggtttctt ccaagggcct gcgcgctttc gtgacgattt cctgaacccg
    17581 gtagccgaat gtcgcggcaa cggacacgcc ccattctgcc gcatcgaaca aaccgaactg
    17641 cccggacaat acgcgttcca tatcggcata gttgaaacct tccaccgggc aggaatcgat
    17701 acccgccatc gccgcacccg tcatcatgtt ggctaacgcg atataggtct ggcggcagca
    17761 ccagtcaaac aaggcgcgcg aatcgtccaa aatcttgatg tcgtcagctt gaaacgcctg
    17821 atacctcgcc aaagattttt ctacggcatc cggttcggta acgccgcgcc gtttgagact
    17881 ttccaacata aacgggctgt cgaagcgggc atttttcttc gccaaaaaca ccaccaaatg
    17941 actggcggta tccaaagcat ccgccatacc ccaagaaaac agcttgattg cctgtcggat
    18001 ttcggggttt tgaaccacaa caaactgcca aggctccgaa ccgaccgaac tgggcgacaa
    18061 acgcccgagt tctaaaataa actgaaaatc ctcggcactg attttacgtg ccgcatcgta
    18121 atgccggcac gatttgcggt ttttaaatgc ggatagaacc tgctctttgc ttaatactgt
    18181 catcgtgcat ccttttatta ctttgattgc aaattgattt caaaccgata cggcactgcc
    18241 gcaccctata agccgtcccc gccatcaagc ttcacccgga ttttacccat ctctctacgg
    18301 ctgggaaaac aaagcggcgg cagattcggg aataactccc caatgccttt cagacggcat
    18361 ttggacatcg caaacgcgcc tacgggtagg cgatataggc ataagccgaa tggttgtgga
    18421 tagactcgaa attctcgctc tcgacgacga aactcttgat gcgtttgtcg gcaatcagcg
    18481 aagtagcgac atcgcgcacc atatcttcca cgaatttcgg gttttcgtag gccttttcgg
    18541 taacgtattt ttcatcgggg cgtttgagca ggccgtagag ttggcagctc gcctgcgttt
    18601 ccacataatc gataacttcc tcgataccga cttcggcatc ggaagtcagg ctgacggtaa
    18661 cgtgcgaacg ctgattatgc gcgccatatt gggaaatttc tttggaacac gggcaaagtg
    18721 aggttacggg aatcatgacc ttcatactgt ggccgtatgc cccgtctttc atttcacccg
    18781 tgaggctgac atcataatcc agtaaggacc ggataccgga taccggcgcg gttttcttgc
    18841 ggaaaaacgg aaaagaaacg ctgattttgc cggcgcggga atccaaaagc gcgaccattt
    18901 cggcagtcag cctatgcaat tgtgcgaaat ccaagacttc ggtatgttgc tccatcaatg
    18961 cgacaaagcg cgacatatgc gtccctttct gctcggcggg cagataaacc gtcatcgtca
    19021 ggcgagcaac cgtggattgt gttccttcgg cggttttcag ggtaatcggg aagcgcaggt
    19081 ctttaatgcc gacctgattg atcggcaggt tgcgcaaatc tctgctggat tgcacgtctg
    19141 caatggcgtt catgcgttgt ttgtccttaa tattcagata attattgaga tgtgtgtatt
    19201 gtatggcagg cagatgccgt ctgaaaaaac gctgtcggcc gcctgcctgc aaatgcgaga
    19261 ttatatcact tgcttttggc ggctgcattg attgtttcta ttttcgggat agtgataaaa
    19321 tcccgactta tccatatctt acaaggcaga aacagatgaa attcccgacc cgtgccatcc
    19381 attccggcta cgattgcgac gaacacaacc gcgcgctgat gccgccgatt tatcaaaaca
    19441 gtatgtttgc gctgcacgaa atcggcgaaa atgtgcctta ccgttattcg cgcctgagca
    19501 acccgacccg tcagattttg gaagacaccg ttgccgattt ggaacacggt gcggcaggtt
    19561 ttgcgttttc cagcggtatg gcggggattg atgccgtgtg gcgtaccttc ctgcgcccgg
    19621 gcgataccat cgtcgcggtc gccgatattt acggcggcgc atatgactta ttggtcgatg
    19681 tttatcaaaa atggggggtg aacgttgttt ttgccgattt gggcaatccc gataatttgg
    19741 acgaattgct caaagcgcac aatgtcaaac tggtttggct ggaaatgccg tccaatccgc
    19801 ttttacgctt ggtagacatc aaagcccttg cagcgaaagc caaagcagcc gacgcgctgg
    19861 tcggcatcga caacaccttt gccacgccgt atctgcaaca gcccttggat atgggttgcg
    19921 attttgcatt ccattccgct accaaatatt tgtgcggcca ttccgacgta ttgatgggca
    19981 tcgtcgttgc caaaaccaaa gagctggctc agcctttgca cgatatgatg gtgcataccg
    20041 gcgcgattgc aggcccgacg gactgctggc tggtgttgcg cggcatcaaa acgcttgccc
    20101 tgcgtatgga ggcacactgc aaaaacgcac tcgaaattgc gcgccgtttg gaagcccatc
    20161 ctgccattga aaaagtgttc catcccggcc tgccgtctca cgaacattac gcactcgccc
    20221 aagcgcaaat gcccaaaggc atcggcggcg tggttacggt ttatctcaaa aacgacacgc
    20281 gcgaagcggc aaacagcgtg attaaaaaca tgaaactggt caaaatgacc tccagcctcg
    20341 gcggcgtgga aagtctggtc aaccattgct attcccaatc tcacagcggc gtgccgcata
    20401 atgtgaaaat ggaaatgggc atcagggtcg gactcctgcg cttctccatc ggtattgaag
    20461 acgtagatga tatttggaac gatatttccg ccgcactcga tacaactttg taaaccgtaa
    20521 aaaatgccgt ctgaaaccat agtttcagac ggcatttcaa tattgcgaat caaatatcaa
    20581 cgcttcagca tctttgccgc ctcaatggcg taataggtca aaatcccgtc cgcacccgca
    20641 cgtttgaatg ccagcaggct ttccaaaacc actttgccgc cgtccagcca gccgttggca
    20701 accgccgcct gcaacatcgc atattcgccc gaaacctgat aggcataagt cggtacgccg
    20761 aactcgtcct tcacgcggcg gacaacgtcc aaatacggca aaccgggctt caccatcacc
    20821 atatccgcac cttcctgaat atcgagcgcc acttcatgca gcgcctcatc ggtatttgca
    20881 ggatccatct gataggtctt tttatctgcc tttcccaaat tgcccgaact gcctaccgca
    20941 tcacggaaag ggccgtagaa tgcagaagca tatttggcgg aatatgccat aatccgcgta
    21001 tggatatgtc cggcatcctc caaagcctcg cggatggcgc cgatacgccc gtccatcata
    21061 tcggaaggag caacgacctg cgtgcccgcc tctgcatgac ataaagcctg tttcaccaag
    21121 acttctacgg tttcatcatt catcacgtaa ccgttttcgt ccgtcagtcc gtcctgaccg
    21181 tgcaccgtat aaggatcgag cgcgacatcc gtcataatgc ccagttcggg aaacctctcg
    21241 cgcaaggctc ggacagttga cggcacgagt ccttcgggat tgtacgcctc ctgcgcacgc
    21301 ccggttttgt ttgccgtaac cacgggaaag agtgccaaca tcggaatacc gagcttcacc
    21361 gcctcttccg ccgtaaacag cagcctgtcc aaactctgac gcttcacgcc cggcatagaa
    21421 ggcacatcct cctcgcgcgc cgccccctcc aatacgaaca ccggataaat caaatcatcg
    21481 gcggtcagca tatgctcgcg catcaggcgg cgtgaaaaat catccctgcg catacggcgc
    21541 atacgcgaag ccggaacatt gcggtaagga aattgcataa gccctccaat catcctgtca
    21601 acaattcaaa tcatacggaa gccgccgcaa cttgcagacg gcatcgagcg gtaatcaaaa
    21661 tccgttttca ccggaaaggg tttcggcacg ccgaaatgcc gcgccgaagg acagcgtgcc
    21721 gcccattgaa agaacaatag caaaacaacc acttcaggct gtcaggcctc gatattctta
    21781 cgccacaata ccaaaagttt cccgatatgc cgaacaggtt gcgcgtcaac cgcctcacac
    21841 aaggtattgc agatttcgat acgctcggca cggtcgtcgc cgaatacgcg cactttaatc
    21901 agctcatgcg ccgtcagtgc cgcatcggtt tccttgatga ctgcgtccgt cagaccctgc
    21961 tgaccgacca tcacaacagg atggagatgg tgcgcgcgcg ctttcagttc caaaatttct
    22021 ttggtgttca atttggtatc cgtcattttc ctactgtttg aataaaaagg ataatgcagc
    22081 attgtacgcg atttggcacg gcaacggcaa aattaacgta caatacaccg tttacattcc
    22141 gacccgcgaa ccactatggc tgtacgttcc aaatcctcaa aagcgtggct gcacgaacac
    22201 atcaacgacc actacgtcca tatggcgcaa aaagacggct accgcgcccg tgccgcatac
    22261 aaacttttgg aaatcaacga aaaagacaag ataatcaaac ccggcacggt acttgccgac
    22321 ttgggcagcg cgccgggaag ctggtcgcag gttgccgcca agctgacggg tacttccgga
    22381 acggttttcg ccttggacat cctgcctatg gaagccatag ggggcgtgtc cttcattcag
    22441 ggcgacttcc gcgagaacga cgttttggcg caattcgaaa ccttgttgga caaccgcccg
    22501 ctcgaccttg taatctgcga tatggcgccc aatatgtcgg gaaacgccgt aagcgatcag
    22561 gcacgcagct tttatctgtg cgaactggct ttggacttcg cctcgcaaca cctgaaaacc
    22621 ggcggcagct ttttggtcaa agtctttcag ggtgcaggct atcaggaata catggcagcc
    22681 atgcgcgaaa ttttcggcac tgtgcagacg cgcaaacccg aagcctcgcg caatcgctcc
    22741 agtgagattt atttattggg caaaaataaa cgctgacaat acagacggcg tgctttacaa
    22801 tcatttccgt tttacacctc aattatggag ccttgctaag tggggaacac ctttaaatca
    22861 atccttgtct gggtcgcctt gggtatcggc ctgatggctg cgttcaacgc tttggacggc
    22921 aaaaaagaag acaacgggca aatcgaatat tctcagttca tccgacaggt caacaacggc
    22981 gaagtatccg gcgtcaacat cgaaggatcc gtcgtcagcg gttacctgat taaaggcgag
    23041 cgcaccgaca aaagcacctt cttcaccaac gcccccttgg atgacaacct gattcaaacc
    23101 cttttgaaca aaaacgtccg cgtaaaagta acgccggaag aaaaaccgag cgcgctgact
    23161 gccctgtttt acagcctgct gcccgtcctg ctgctgattg gcgcatggtt ctactttatg
    23221 cgtatgcagg cgggcggcgg cggaaaaggc ggcgcattct ccttcggcaa aagccgcgcc
    23281 cgcctgctgg acaaagatgc caacaaagtt acctttgccg atgtcgccgg ctgcgacgaa
    23341 gccaaagaag aagtgcagga aatcgtcgat tacctcaaag caccgaaccg ctatcaaagc
    23401 ctcggcggcc gtgttccgcg cggcatcctg ctggcgggca gcccgggaac cggtaaaaca
    23461 ctcttggcga aagccattgc aggcgaggcc ggcgtgccgt tcttcagcat ttccggttcc
    23521 gattttgtcg aaatgttcgt cggtgtcggt gcaagccgcg tccgcgatat gttcgagcag
    23581 gcaaagaaaa acgccccatg cattatcttt atcgacgaga ttgacgcggt aggccgccaa
    23641 cgcggcgcag gtttgggcgg cggcaatgat gagcgcgagc aaacattaaa ccaattattg
    23701 gttgaaatgg acggttttga gagcaatcag actgtaattg tgattgcggc aaccaaccgc
    23761 cccgacgtac tcgatcctgc gctgcaacgc cccggccgct tcgaccgcca agtcgtcgtc
    23821 cccctgccgg acatccgggg gcgcgaacag attttgaacg tccattctaa aaaagtgcct
    23881 ttggacgaat ctgtggattt attgtccctc gcgcgcggca cgcccggttt ttccggcgcg
    23941 gatttggcga acctggtcaa cgaagccgcc ctgtttgccg gccgccgcaa caaagtcaaa
    24001 gtcgatcaaa gcgattttga agacgccaaa gacaaaatct atatgggtcc ggaacgccgc
    24061 agtatggtga tgcacgaaga cgaaaaacgt gcgacggcgt atcatgagtc cggacacgcg
    24121 attgttgccg aaagcctgcc ctttaccgac cccgtccaca aagtaaccat tatgccgcgc
    24181 ggacgtgcgc tgggtctgac ttggcagctt ccggagcgcg accgcatcag tatgtataaa
    24241 gatcagatgt tgagccagct ctccatcctg ttcggcggac ggattgccga agacatcttc
    24301 gtcggacgca tctccaccgg tgcatcaaac gactttgaac gcgcaaccca aatggcacgc
    24361 gaaatggtaa cgcgctacgg catgagcgac aaaatgggcg tgatggttta tgcggaaaac
    24421 gaaggcgaag tcttcttggg gcgcagcgta acccgttcgc aaaacatttc cgagaaaacc
    24481 cagcaggaca tcgacgcgga aatccgccgg attttggacg agcagtatca ggttgcctac
    24541 aaaatcctcg atgaaaaccg cgacaagatg gaaacgatgt gcaaagccct gatggaatgg
    24601 gaaaccatcg accgcgatca ggtactggaa attatggcgg gcaaacaacc cagcccgccc
    24661 aaggattaca gccacaacct gcgcgagaat gcggacgcgg cggaagataa cgcgccgcac
    24721 gctccgactc gggaaaaaac cgaagcacct gccccggcag acaccgcctc gacagagtcc
    24781 gggcagcagc ctgaaaacaa ggcttaactc cccgaacaaa cggcagcccg caagctgccg
    24841 ttttcccatc ccgttttcag acggcatttt ccgctcaatg ccgtctgaaa cgccaaagcc
    24901 gtatcggttt ttgcgaatct gcgatatggc ggtttaaatt gaaatcagaa cggggcaagg
    24961 ctgtaccggt ttaaaattaa accgctataa taccgccctt cgaatacacg cccgcattgg
    25021 tgatgcccgt gaaaaaagtt gaaaaaaaca tcttggtgct gcacggcgcg gacaaaatgt
    25081 tcgagctggt cgacaaggtt gaggattacc cgcactttct gccgtggtac agcaagaccg
    25141 aggtcatcgg gcgtagcggc aacgaactga aggcgcggct gtttatggat tatatgcgcg
    25201 ttcgccaatc gtttgccacg cacaaccgca acatccccgg cagggaaatc cgtatggaac
    25261 tgctcgaagg cccgttcaaa accttacgtg gaacgtggaa atttatcgat ttgggcgacg
    25321 atatgtgcaa aatcgaattc aatttggaat acgatttttc caatgccgtt ttgtccgcct
    25381 taatttcccc cgtcttcaac cacctttccg ccacgctggt cgaagcgttc gtcaaagagg
    25441 cagaccgccg ttatgcttga aattgagatt gtgtacggtc tgcccgaccg acaggttttg
    25501 aaaaccatgc agcttgccga gggaacaacc gtccgcaccg ccgcactgca aagcggtttg
    25561 gacggcatat ttgaaaattt aaacctgcat tccgcgcctt tgggcatttt cggcaaagcc
    25621 gtcaaagacg acacgccgct gcgcgacggc gaccgcatcg aagtgtaccg cccgctgttg
    25681 atcgacccca aagaagcgcg ccgcaaacgc gttcaaaatc aagaagaata accatgccgt
    25741 ctgaagcctt cagacggcat tcgacagaaa cacggaaaat atcatgtcaa acacaatcaa
    25801 aatggttgtc ggcttgggca acccgggcaa agaatacgaa cagacccgcc acaatgcggg
    25861 cttttggttc ctcgacgaac tggcgtggaa atggaaggct tcgtttaaag aagaaaaaaa
    25921 attcttcggc gaagttgccc gcgccgccct gcccgacggc gatgtttggc tgctcaaacc
    25981 ggccacgttc atgaaccgtt ccggacaggc ggttgccgcg cttgcacagt tctacaaaat
    26041 caaacccgaa gaaatcctcg tcgtccacga cgaactcgac atcccttgcg gacggatcaa
    26101 attcaaactc ggcggcggca acggcggaca caacggcttg aaagacattc aggcaaaact
    26161 cggcacggca gactattacc gcctgcgcct cggcatcggc caccccggcg accgcaacct
    26221 cgtcgtcggc tacgtcttga acaaaccgag cgcggaacac cgccggcaaa tcgacgatgc
    26281 cgtcgccaaa tccctgcagg ccgtacccga catccttgcc ggcaaatggg aagaagcaac
    26341 ccgcttcctg cacagcaaat gacccgatgc cgtctgaagc cctttcagac ggcattttcc
    26401 cgatttccgt atccgaacag tcatgaccga actcaagcag cttatccaaa ccgaatccat
    26461 ccccgtcatc gaagaaaccc tcgatttcct gctgtacgaa tgcagcatcg acgacgcacc
    26521 gtccgccgaa gaagtggcac aatggcgcga catacttgcc gcacgcggcg gcaaattcct
    26581 gcgcctgtcc aaaatctgcc aaacgtggct ggacgaggag gcggcatgaa gctgccgcgc
    26641 aaccgcttca gcctgctttc cgcattgtgg tttgccggcg gcatctattc gctgctcttc
    26701 aaagctgccg acaccgcgcc gccgccgttt ccacatttcg acaaagcagc acaccttgcc
    26761 ctgtttttcg cacaaatctt gcttctggcc aaagcattca aaaccggaaa acttcccatc
    26821 ccctaccgca gcctgattgc gttcgccttc tgttttgccg tcggcagcga atgcgcccag
    26881 gcatggttta ctgcaacgcg aaccggcagt ttgggcgatg tccttgccga cctgacgggc
    26941 gcagcccttg ccctctttgc cgcgcgttct gcctgccgcc cggactaaat cggtttattt
    27001 ctcccaaaca ggatgaatcc ccctgatgca tcctgttttt ccccttacat atcaatccca
    27061 tctcataaac aaaaccgaca aatcgtttac aatatattta cactacaccg aattacaaat
    27121 atactcgaag cggttgcaga accgacggtt tcgcaaaccg tttcggattg cacgatacaa
    27181 aagaaaaacc gattttgttg ccttaaagga gcattcatga acctgcatgc aaaggacaaa
    27241 acccagcatc ccgaaaacgt cgagctgctc agtgcgcaga agccgattac cgactttaag
    27301 ggtttgctga ccaccattat ttccgccgtc gtctgtttcg gcatttacca catcctgcct
    27361 tacagccccg atgccaataa aggtatcgcg ctgctgattt tcgttgccgc actttggttc
    27421 accgaggccg tccacatcac ggtaaccgca ttaatggtgc cgattctcgc cgtcgtactc
    27481 ggtttccccg acatggacat caaaaaggcg atggctgatt tttccaaccc gattatctac
    27541 atttttttcg gcggcttcgc gcttgccacc gccctgcata tgcagcggct ggaccgtaaa
    27601 atcgccgtca gcctgttgcg cctgtcgcgc ggcaatatga aagtggcggt tttgatgttg
    27661 ttcctcgtta ctgcctttct gtccatgtgg atcagcaaca ccgccaccgc cgcgatgatg
    27721 ctgcctctag caatgggtat gctgagccac ctcgaccggg aaaaagaaca caaaacctac
    27781 gtcttcctcc tgctcggcat cgcctattgc gccagcatcg gcggcttggg cacgctcgtc
    27841 ggctcgccgc ccaacctgat tgccgccaaa gccctaaatc tggacttcgt cggctggatg
    27901 aagctcggcc tgccgatgat gctgttgatt ctgcccttga tgctgctctc cctgtacgtc
    27961 atcctcaaac ctaatttgaa cgaacgcgtg gaaatcaaag ccgaatccat cccttggacg
    28021 ctgcaccgcg tcatcgcgct gttgattttc cttgccacag ccgccgcgtg gatattcggc
    28081 tccaaaatca aaaccgcctt cggcatttcc aatcccgaca ccgttatcgc cctgagtgcc
    28141 gccgtcgccg tcgtcgtctt cggcgtggcg caatggaagg aagtcgcccg caataccgac
    28201 tggggcgtgt tgatgctctt cggcggcggc atcagcctga gcacgctgtt gaaaacatcc
    28261 ggcgcgtccg aagccttggg acagcaggtt gccgccacct tttccggcgc gcccgcattt
    28321 ttggtgatac tcatcgtcgc cgccttcatt atttttctga ccgagttcac cagcaacacc
    28381 gcctccgccg ccctgcttgt accgattttc tccggcatcg ctatgcagat ggggctgccc
    28441 gaacaagtct tggtattcgt catcggcatc gccgcatctt gcgccttcat gctgccggtt
    28501 gccacgccgc ctaacgcgat tgtgttcggc acgggcttaa tcaaacaacg agaaatgatg
    28561 aatgtcggca tactgctgaa catcctatgc gtagtattgg ttgctctgtg ggcttatgct
    28621 gtactgatgt aaaccatcga cctaaacaac aagaccgtct gaaagaatat ttttcagacg
    28681 accttgaagt ttgtcgttca gacacaattt gtcgaataat tcaaaaccgg attctaacga
    28741 aaggaaaacc catgattatc ctgcacacca acaaaggcga catcaaaatc gaactcgatt
    28801 tcgacaaagc ccctgttacc gccaaaaact tcgagcaata cgtcaaagac ggcttctacg
    28861 acggcgtaat cttccaccgc gtcatcaaag gcttcatgat tcaaggcggc ggcatggatg
    28921 aaaacatgaa cgaaaaagaa acccgcgatc cgattcaaaa cgaagcgtcc aacggcctgc
    28981 ccaacgataa atacaccatc gccatggcgc gcacttccga cccccattcc gccggcgcgc
    29041 aattcttcat caacactgcc gacaacgctt tcctaaactt ccgttctaaa gagctgtacg
    29101 gcaaaaccgt cgtccaagac tggggctatg ccgtattcgg taaagtcgtt gacggttttg
    29161 acgttgtcga tgccatcgaa agcgtatcca ccaaacgcca cggctaccac gacgatgtgc
    29221 cgaccgaacc tgtcatcatc attaaagccg aagcagtata aaccggcaat ccgaaagcag
    29281 cctgcataaa aggctgcttt tatttcagac ggcatgttat ttgatgtaac cgggctatgc
    29341 cgtctgaaaa ccggacgcaa gccttcagac ggcataccgc tatgttaaaa tacgcccgtt
    29401 tttcctaaac ggacacaaag gaaaccttat ggcaagcatc acccgcgaca tcttcaaagc
    29461 ctacgacatc cgtggcatcg tcggcaaaac cctgaccgac gatgccgctt atttcatcgg
    29521 cagggccatc gccgccaaag ccgccgaaaa aggtatcgcc cgcatcgcga tcggacgcga
    29581 cggacgcttg agcggccccg aactgatgga gcacatccaa cgcggcctga ccgacagcgg
    29641 tatcggcgta ctcaatgtcg gcatggttac cactcctatg ctctacttcg cagccgtcaa
    29701 cgaatgcggc ggcagcggag tgatgattac cggcagccac aatccgcccg attacaacgg
    29761 tttcaaaatg atgctcggcg gcgacacgct cgcaggcgaa gccattcaag aacttttagc
    29821 tattgttgag aaagacggtt ttgttgccgc cgacaaacaa ggcagcgtaa ccgaaaaaga
    29881 catctccggc gcataccacg accacatcgt cggacacgtc aaactcaaac gcccgataaa
    29941 catcgccatc gacgcgggca acggcgtggg cggcgcgttt gccggcaaac tctacaaagg
    30001 tttgggcaac gaagtgaccg aacttttctg cgaagtggac ggcaatttcc ctaatcacca
    30061 ccctgatcct tccaaaccgg aaaacctgca agatttgatt gccgcgctga aaaacggcga
    30121 tgccgaaatc ggcttggcgt ttgacggcga tgccgaccgc ttgggcgtgg ttaccaaaga
    30181 cggcaacatt atttatcccg accgccaact gatgctgttc gcccaagacg ttttgaaccg
    30241 caatcccggc gcgaaagtca ttttcgatgt caaatccaca cgcctgcttg ccccgtggat
    30301 taaagaacac ggcggagaag ccataatgga aaaaaccggc cacagcttca tcaaatccgc
    30361 tatgaaaaaa accggtgcac tggttgccgg cgaaatgagc ggacacgttt tctttaaaga
    30421 acgctggttc ggcttcgacg acggcctgta tgccggcgca cgcctcttgg aaatcctgtc
    30481 cgcctccgac aatccgtccg aagtgttgga caacctgccg caaagcattt ccacgcccga
    30541 actcaacatc tccctgcccg aaggcagcaa cgggcatcaa gttatcgaag aactcgccgc
    30601 caaagccgaa tttgaaggcg caaccgaaat catcaccatc gacggcctgc gcgttgaatt
    30661 tcccgacggc ttcggtctga tgcgtgcttc caataccacg ccgattttgg tgttgcgttt
    30721 tgaagcggat acgcaagcag ccatcgagcg cattcaaaac cgattcaaag ccgtcatcga
    30781 aagcaatccg catttaatct ggcctctgta aaaatagaaa aaatgccgtc tgaaactttc
    30841 agacggcatt tttcacaagt agccaatcaa atcttggcag attggatttg gcttaaaaat
    30901 ctccgcgtcc gttcgtgttt gaggtggtcg aacaactctt tcgggctgcc ctgctctacg
    30961 ataacgccgc cgtccatcac gacgacgttc gtggcaactt ccagcgtgaa cttgatttcg
    31021 tgggtaacga cgaccatcgt ccaaccttcc cgcgccaatt ccttcatggc gtccaacacg
    31081 tcttgcacca actcggggtc cagcgcggaa gtgggttcgt caaacagcat caattcaggc
    31141 tgaatcgcca gtgcgcgggc gataccgaca cgctgctgct gaccgccgga aagctggtag
    31201 ggatacaaat ccactttatc gcccaagccg actttttcca gcagtttcaa agcctcttcg
    31261 cgcgcttggg cggcaggctt gccctgtacg gcaaccggcc cttccatcac gttttccaac
    31321 acggttttat gcgggaagag gttgtattgt tggaatacca ttccggactt gcggcgcagt
    31381 gccaaaatat cgtgtttgct tgtttttttg gaaaaatcaa tgcgtaacgg ccgcgcgttg
    31441 tcgaactcga tttgtccgtc ttcgggcatt tccaacgcgt ttaggcagcg cagaaatgtt
    31501 gttttacccg agccggaagg cccgaggatg acgaccacct gccctttgcc cacatccaaa
    31561 tcgatgccgc gcaaaatggt gttttcgcca aaggtcttat ggatattgcg gattttaatc
    31621 atgacaactc cttatttggc gacataacgg tcgaaacgtt tttccaaacg cgcctgaatc
    31681 aaaaacagca ctttacagaa acaccaataa accaatgcag cttcgatata gacaggcaaa
    31741 aagtcataag tgcggtttgc cgtttcctgt gcgacacgga aaagctccgt taccgttacc
    31801 acggcggcaa gcgaggtgtt tttgaacaag ccgataaact cgttgctcaa cggcggaacg
    31861 gcgacgcgga atgcctgcgg tgcgacgatg cggcggaacg tctgcatata ggtcataccg
    31921 atggagaaac ctgcttccca ctgccctttc ggcacggaca aaatcgccgc gcgtatggtt
    31981 tcggaagcgt atgcgccgac attgagcgaa aagccgatga tggcggcggg aatcggattg
    32041 atatagatgc cgacggacgg cagcccgtaa aacacaatca caagctgaac caacagcggc
    32101 gtaccgcgaa cgacggaaat ataaaattcc accagcttca acaagcattt ttggaaaata
    32161 ccgccggaag gcatgattct taccaaagca acggctacgg caataatcat gccgataacg
    32221 aaagaagcga tcgccaaagg caaagacact gtaaagccgg ctttaaccat gggccaaaac
    32281 gcgctgatga gcatatcagc gcgtgtttcc gtcataaacg gcagagaggc aaggaaatta
    32341 ttgaacactg atgtcttttc cgaagaattg ttcgcccagt tttttcaacg tgccgtcggc
    32401 tttcagctcg ttgattgccg tgctgaattt tgccacggcc tcgtcattgc ccttgttgac
    32461 aatcagaccg gaaccgactt tttcatcggc aggcgcggac cacacgattt tcacccccgc
    32521 attcgggttt ttcttcagat agtccaaaac cgccaattca tcgttcaacg tcgcatcggc
    32581 gcgtttttgt tcaatcaggg tcagcgattg cgccaaaccg tccaccggca cgagttccgc
    32641 acctgcggct ttggcttttt cgccgtagtt gctggtcagg gattgcgcgg ttttcacgcc
    32701 tttgatgtcg gctatggatt taatgttgct gtcgttatgc gcaaccaaaa ccgcaccgct
    32761 ccagctgtaa ggttcggatt tgtcaaatgt cgcctggcgt tcggggctgg tcaggccgac
    32821 ttggtttgcc accacgtcga aacgtccggc tttcaaaccc gccatcatcg aatcccattg
    32881 cgtttcttta aactcgactt ttacgcccag tttttccgcc acggcgcggg ttacttccac
    32941 gtcgtaaccg gtcagtttgc cgtctttgtc gtggtaggta aacggtgcgt aagtgccttc
    33001 cgtgccgacg gtaaccgtgc ctttattgtt gatgcgctcg attaaagaac cggaaattgc
    33061 cgattgtgca ggcgcggaag atgctccgct gccgccttcc gaaccgccgc aggccgccaa
    33121 aaccaatgcg gcaatgccgc cgagtacgaa ttttttcaac atcattccct cctgtaaaaa
    33181 gtgtgcaagt gcggcattct aagtgaaatt gcggcaaaca caaagaatac tttttttata
    33241 tggttattcc aaatcggaat gggaaagata tgccgaagcc gccggaagcg gaaataaagg
    33301 gggcgggaaa ggcggcgggc ggcacgaaac cgaaaagcgg catcaggtat gcaaacggcg
    33361 gattcacgca cgccgttccg gcaaaaatcc gcctgccgat tcggtgctat aatccacccg
    33421 aaacagatga caccaaaaag gaacatctca tgaacacgcc ccaatccgcc atcattcccg
    33481 accacgccca agccggcatc tttatcgaag ccgacttcgc cgccaaccgc ctcaacgata
    33541 ttaaagccgc ctgccgcgct tcgctcgacg cgttatccgc cttgaaagcc cgctttccgg
    33601 acgatatttt gggtctgacc atcgccttcg gcagcaaagc ttgggcaaca ttcggacaca
    33661 cggatgaagg cagtgaaatc aaacccttcc ccgaaatggg caacgggctt gcgccgtcca
    33721 cgcagcacga tatgtccatc cacatccaat ccttccgcca aaacgcagcc tacgcgcttg
    33781 cccaatccgt tttgggcgcg ttcggcgaca gcatatgcgt cgcgtccgaa gaacacggtt
    33841 tgcgcctgta tcaggatcgc gggctggacg gtttcgtcga cggcacggaa aacccgcaag
    33901 gcgatgaaac aatccgcgaa gtcgccatca tccccgaagg gctgcccgat gcaggcggca
    33961 gctatgtcct gctgcaaaaa tacctgcacg atttgaaaaa atgggatgcc gtccccgtcg
    34021 ccgaacagga ggcctcggtc ggacgcagca aggaaaccga cgacgaattc agccgcgatg
    34081 tccgcctgcc cgattcgcac ctcggccgcg tcaacctgaa agaaaacgga gtcggcctga
    34141 aaatcgtccg ccgcagcctg cccttcggca aaatcagcgg cgaacacggt ttgatgttta
    34201 ccgcatactg ccgcacgctg cataatatcg aagcgcaatt attgagtatg ttcggcgaca
    34261 cggacggcaa aaccgacctg ctgctccgac acctctccgc cgccgtttcg ggcggatact
    34321 actacgcgcc gtctgtcgaa cgcctgcaaa acctctaagc cggacaatgc cgtctgaaac
    34381 cctttttcag acggcatttt cccgttttac cgtccaaccg ttttcataca cgctatgtcc
    34441 gcacccatcc gagcattcga cccgctgacc gcccccattt ccggcaccaa cctgattgag
    34501 gcctctgccg gcaccggcaa aacctacggc attgccgccc tgtttacgcg cctgatcgta
    34561 ttggaacaaa aaagcgtcga gcgcgtattg gtcgttacct tcaccaaagc cgccactgcc
    34621 gatctgaaaa cacgcctgcg cgcgcgtttg gacgatgtgt tgcaggtttt ggaaagcaaa
    34681 gaaattgccg aacttggaga cgacacgctt tcagacggca ttgccgccta ctgcgccgaa
    34741 caccacgaag gcgacacctt cctgcccgca ctcctggaac aggctttgca aaaagaaagc
    34801 cggacgcgtc tgattgtccg cctcaaggcc gccatcgggc aattcgacaa cgccgccatc
    34861 tacaccatcc acggcttctg ccagcgcatc ctgcgcgact acgccttcct gtgccaagca
    34921 ccgttcgatg tcgaactgac cgaagaagac ggcgaccgcc tgcttgtccc ggctcaagat
    34981 ttttggcggg aacgcgtcag cggcgacccg gtgcttgccg cattggcgtt taaacgcaaa
    35041 gctgtgccgc aaaccgtcct tgcccaaatc cgcgcctacc tgtcccgccc gtacctgaat
    35101 ttccgccgtc cgcaggcgga tttgaaacag gcgcagcgcg acgccgaaac ctcatggcaa
    35161 accgtctgcc gcctgctgcc cgagctggaa gccggctttt ggcgcatcca tcccgacctc
    35221 aacggcaaca gttaccgcaa aaacagcttc ggcaaccttt ttaaagaact ggcacaaaaa
    35281 tccgccgccg gacaactgcc ctttctggac aaagacacgc acgaacggct cttgaaactc
    35341 tcatccgaca aactcgaagc cggactgaaa aaaggcaaaa cgcccgatgc ggcagtattt
    35401 gccgaattgc agaaactggc agacttcggg cgcgatttga acgcactcga agaagcggaa
    35461 gaagcaacaa tgatccggct gcaactggat ttaatcgaat atctcaacag cagccttgcc
    35521 gaaatgaaaa aatcgcgccg cgaacgcggt ttcgacgacc tgctgctcga tgtccacacc
    35581 gcgctgaccg acaatccgca cgccgaaacc ctcgcccgcg ccgttgccga aaactgggaa
    35641 atcgcgctga tcgacgagtt ccaagacacc gacccgctgc aatacgaaat cttccaaaag
    35701 attttcatcg cccgaaaccg cccgctgttc ctcgtcggcg accccaaaca ggcgatttac
    35761 agctttcgcg gtgcggacat ttacgcctac cttcaggcgg cggaagacgc gcggcaccgc
    35821 tacacgctcg ccaccaacta ccgcagccac gccgcgctta tcggcagcat cggcgcgctg
    35881 ttccgcctca aagaacgccc gttcgttttg gaaaacatcg gctattcgga agtcggtgcg
    35941 gcgcgtgccg aaagcaggtt gtcgcccaaa cgtcctgccg tacagctccg ttggctgcac
    36001 gaaaacgaca atgaaaaagc caacaaagac gttttgcgcc gccgtgccgc cgactattgc
    36061 gccgacgaaa tcgcccgcgc gctcaacgaa gcctccggag gccgtctgaa tttcaaaggc
    36121 cgcccgttgc agtcgggcga tattgccgtt ctggtacgca cgcacaacga ggcggtgatg
    36181 atttccgccg cactgaaaaa acggcaggtg caaagcgtcc tgctttcgcg cgaatccgtg
    36241 ttcgcctcgc ccgaagccgc cgccctgtcc gcgctcatcg gcttctggct cgaaccgcgc
    36301 cgcgccggaa cgctgcgctt tgtcctgaca agcggcatat tcggttatga cgcgcagcaa
    36361 ttgcacgact tcaaccaaaa cgaaagcgag attttgcatt gggcggaatc tgcccgaacc
    36421 gcgctcgaca tatggcaaaa atacggcatt ttcgccgcta tgcagcagtt ttcccaaaca
    36481 cacggcatcg aaacgcgcct cttaagccgg aacaacgggc gcagcctgac caattatttc
    36541 caactgctcg aactgcttgc cgccgaagac gcgcaaaacc gcaaccccgc cgcactgcac
    36601 aaatggctgc gcgatcaaat cagcctggcc ggcaacaacg gcggcgacaa ccgcgccatc
    36661 cgtttggaaa gcgacgaaga tttggtcaaa atcgttacca tgcacgcctc gaaaggtttg
    36721 cagtatccgc tggtgtactg cccgtttgcg tgggacgcgc aagataccgg accgtccgac
    36781 tggcaaatcc tccaccaagg cgcaaaccgg gccgaacttt tggcaaaggc gcaactgtcg
    36841 gaaagcgaac agaagcaata cgccgacgaa gaaatggcgg aacgcctgcg cctgctttat
    36901 gtcgcgctga cgcgtgccga ggaacagctc aacatctacg ccgcctattc ttccgatacc
    36961 gccgacaacc cccttgccta cctgatcgaa ggcttgccgc aagacagccg cgaaaccgtc
    37021 cgccgtacct atgcgtgtga aaaagacggc ataacgatgc tcaaacgcaa ctggcggcgc
    37081 gtggcggaca atgccccggc cggcacggat ttcgccttca cagaagatgc gccgccccct
    37141 gccgcctatc gcggcaacgc cgatcaagcc gccgaatttg ccgcaaacag cattcccgaa
    37201 cgcggattcc gatttgtccg ccacaccagc tttaccgcct taagccgcca tacccaaacg
    37261 cccgacggcg gcgaagaaga tgcctgcccg tccttggatg ccgccgaaac ctcggtgccg
    37321 gcgatgccgt ctgaaacgcc gacggcttca gacggcatat cgatacacga ctttccgaaa
    37381 ggcacgcagg cggggctgtg cctgcacgaa attcttgaag atttcaaatt cggacaagca
    37441 gccgccgaac aggaaaccct cattgccgac aagctgaaaa aatacggttt tgaagaaata
    37501 tggctgcccg ccgttgccga aatggcggaa gcctgccgca aaacgccgct gactggggca
    37561 tacggcctgt ccgacatccc gcccgggtgc cgccgtcccg aaatgggctt taccctccac
    37621 accgaagact tcggcctcaa acggctgcgc gactggcttg cccgcgacga catcaggctg
    37681 cccgaagtct gccgtgccgc cgccgagacg ctcgacttcc acaccgtcaa cggcttttta
    37741 aacggcttta tcgatatggt ctgccaagac cccgacggca atatctgcat catcgactac
    37801 aaatccaacc acctatccgc ctacacgcgg caggcgatgg acgaagccgt cgcgcaccag
    37861 cactattacc ttcaggcact gatttacgcc gttgccgccg cgcgctactt caaactgcgc
    37921 ggacaaccgc ccgccgccgt ttccgtccgc tacctgtttt tgcgcggatt ggatggcaaa
    37981 ggcggcggcg tttggcgttg ggacatagat gccgccgctt tggaacagat aaaataactt
    38041 cccgtccctt aagacgacaa ccgcaggaga accctatgaa tatcaaacaa ttgattaccg
    38101 ccgcactcat tgcctcagcc gcctttgcca cgcaggcagc cccgcaaaaa cccgtatccg
    38161 ccgcccaaac cgcgcaacat tcagccgttt ggatcgatgt ccgttccgaa caggaattta
    38221 gcgaaggtca tttgcacaac gcggtcaaca tccccgtcga ccaaatcgtc cgccgcatat
    38281 acgaagccgc gcccgacaaa gacacgccgg tcaacctcta ctgccgcagc ggacggcgtg
    38341 ccgaagccgc ccttcaagag ctgaaaaaag caggttatac aaatgttgcc aatcacggcg
    38401 gttatgaaga cctgctcaaa aaagggatga aatgacgcaa tgccgtctga aaggacaggc
    38461 tttcagacgg catacggcgt tccggcacgc ggcacggcat caggcgcggc gcgtgccgcc
    38521 ccgtccgaag cccgataaac aaaccgataa ggaaatacga tgaaacacat actccccctg
    38581 atcgccgcat ccgcactctg catttcaacc gcttcggcac accctgccgg caaaccgccc
    38641 acccaaaacg aaaccgctat gaccacgcac accctcacct cgaaatacag ttttgacgaa
    38701 accgtcagcc gccttgaaac cgccataaaa agcaaaggga tggacatttt tgccgtcatc
    38761 gaccatcagg aagcggcacg ccgaaacggc ctgaccatgc agccggcaaa agtcatcgtc
    38821 ttcggcacgc ccaaggccgg tacgccgctg atggtcaaag accccgcctt cgccctgcaa
    38881 ctgcccctgc gcgtcctcgt taccgaaacg gacggcaaag tacgcaccgc ctataccgat
    38941 acgcgcgccc tcatcgtcgg cagccgcatc agtttcgacg aagtggcaaa cactttggca
    39001 aacgccgaaa aactgataca aaaaaccgta ggcgaataag cccgtcgccg acatatggcg
    39061 gatggaaatc aaatgcacac gcccctcatt cccccgaagt cgggaatcca agcggttggg
    39121 ttaccgtgat ttccaatcat tgccgaaacg gacgattccg gattcccgcc ttcgcaggga
    39181 tgacgggcgt atgcgttttg ccatatcaca ggcaactttg ccgcaaatct tatctgtcgc
    39241 cggtatgcct tcttgtttca atccgccaca aaccaaatgc cgtctgaaac ctgatttcag
    39301 acggcatttc cgtttattcc ctgctgtcgc ggcaaatatc gatggcttcc tgcaaacttg
    39361 aaacgccgtg gattttcagg ttcggaaact ctttggcatt gcgcggcata ttggctttgg
    39421 ggacgatggc gcgtttgaag ccgagctttt ccgcttcttt gagccgctct tgtccgcgtg
    39481 cgacggggcg gacttcgccg cttaggccga tttcaccgaa gaccacggtt ttttcaggca
    39541 tagggcggtt gcggaagctg gaaagcatcg cgaggatgac cgccaaatcc gccgccggtt
    39601 cgccgatttt cacgccgccg acggcgttta aaaaaacatc ctgatcgaaa caggcgatgc
    39661 cgccgtgccg gtttaacacg gcaagcagca tcgcaaggcg gttttgttcc aatccgacgc
    39721 tgaggcgttt gggtgtgaag ccgtgcgcgt catcgaccaa tgcctgaatt tcgaccaaaa
    39781 gcgggcggct gccttcctgt gtaaccaaaa cgcacgaacc gggcgtgtcg tcgcggtagc
    39841 tggcgaggaa gatggcggac gggttggata cgcctttcaa accgttttcg gtcatcgcga
    39901 acacgcccaa ttcgtttgcc gcgccgaaac ggtttttgat ggcgcgtatc atgcggtagt
    39961 tggaatgttg gtcgccctcg aaatacagca cggtatcgac catatgttcc agcacgcgcg
    40021 ggccggcaat cgctccgtct ttggtaacgt gtccgaccag tatcatggcg atacccattt
    40081 gtttcgccat acgcgtcagt tgggcggcac attcgcgcac ctgcgacacg gaaccggggg
    40141 cggacgtgat ttggtcggaa tacatggttt ggatggaatc gataacgacg acttcgggct
    40201 gatgctgttt caaggccgcc tgaatcgctt ccatgcggat ttcggcaagc aggtttacgc
    40261 cttcggcgtg cagttccaaa cgttgcgagc gcagggcgac ctgttgggcg gattcttcgc
    40321 cggaaacgta cagcactttg cggctttgcg ccattttggc gatggtttgc aacaacagcg
    40381 tggatttgcc gatgccggga tcgccgccga gcaggatgac cgcgccatcg accaaaccgc
    40441 cgcccaatac gcggtcgagt tcgcccatac cggtcggatt gcgcggcact tcggcagcgg
    40501 taacggcgga gagggattgg acggtcgaag tgtccgccgc ccaagattgg aatcgggcgt
    40561 ttttcggctc gggcgcggca aagctttcct gaagcgtgtt ccactcgccg caatgcggac
    40621 atttgccctg ccatttcggg gaagtgccgc cgcattcggt gcattggtaa agggttttaa
    40681 gcgtttttgc catgatgttt tccctatggg
//
LOCUS       DAXGCP010000007        38871 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.007, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000007 DAXGCP010000000
VERSION     DAXGCP010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38871)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38871)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38871
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.007"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            6..81
                     /locus_tag="ACFJCW_000309"
     tRNA            6..81
                     /locus_tag="ACFJCW_000309"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:39..41,aa:Trp,seq:cca)
     gene            196..474
                     /gene="secE"
                     /locus_tag="ACFJCW_000310"
     CDS             196..474
                     /gene="secE"
                     /locus_tag="ACFJCW_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HFC4150558.1"
                     /translation="MTEHTPEKKNVKVNQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            476..1012
                     /gene="nusG"
                     /locus_tag="ACFJCW_000311"
     CDS             476..1012
                     /gene="nusG"
                     /locus_tag="ACFJCW_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HFC4150559.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQR
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1113..1547
                     /gene="rplK"
                     /locus_tag="ACFJCW_000312"
     CDS             1113..1547
                     /gene="rplK"
                     /locus_tag="ACFJCW_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HFC4150560.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMESGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1547..2242
                     /gene="rplA"
                     /locus_tag="ACFJCW_000313"
     CDS             1547..2242
                     /gene="rplA"
                     /locus_tag="ACFJCW_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HFC4150561.1"
                     /translation="MAKVSKRLKVLRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDSRKSDQVIRGSVVLPKGTGKTTRVAVFTQGVNAEAAKEAGADVVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKIGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGVRVDTSSVNN"
     gene            2470..2970
                     /gene="rplJ"
                     /locus_tag="ACFJCW_000314"
     CDS             2470..2970
                     /gene="rplJ"
                     /locus_tag="ACFJCW_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HFC4150562.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFVELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3028..3399
                     /gene="rplL"
                     /locus_tag="ACFJCW_000315"
     CDS             3028..3399
                     /gene="rplL"
                     /locus_tag="ACFJCW_000315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HFC4150563.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASVGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEAAGAKVEIK"
     gene            3590..7768
                     /gene="rpoB"
                     /locus_tag="ACFJCW_000316"
     CDS             3590..7768
                     /gene="rpoB"
                     /locus_tag="ACFJCW_000316"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HFC4150564.1"
                     /translation="MNYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVYYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVAGRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEQESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFAGAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLTDEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKERRKAGELREFLNKLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            complement(7733..7873)
                     /locus_tag="ACFJCW_000317"
     CDS             complement(7733..7873)
                     /locus_tag="ACFJCW_000317"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150565.1"
                     /translation="MDKGTVLSDGISFLNIVGLPRIPAEQLPLCRLKPVSVAFQIDIQ
                     TQ"
     gene            7921..12096
                     /gene="rpoC"
                     /locus_tag="ACFJCW_000318"
     CDS             7921..12096
                     /gene="rpoC"
                     /locus_tag="ACFJCW_000318"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HFC4150566.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLNMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENMEEGVTVAKQTDDVTGLSALVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDMMAANEKALEEGKEPARYENILLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12384..12797
                     /locus_tag="ACFJCW_000319"
     CDS             12384..12797
                     /locus_tag="ACFJCW_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150567.1"
                     /translation="MKVSQSAMNKLVIAVIASMGLTACAGGGSDSSMSVQPSVSEQLK
                     DNANVDAKDEKVIEYLKKSSLKDVPKELQAKVLKVKGDEYTGVRKQYAGKLGKGESVK
                     AMLFLDGEEPFSKEQLQKMDVYVNGKKYEGSKGGN"
     gene            12815..13444
                     /locus_tag="ACFJCW_000320"
     CDS             12815..13444
                     /locus_tag="ACFJCW_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H binding protein domain-containing
                     protein"
                     /protein_id="HFC4150568.1"
                     /translation="MSEQKIEFYGADKEQNYALLKTWVYEQPYSVVRGYFGYSRKDGN
                     PIEEDGQNPEEIPFDLYLGDIRGVATDEDKLPKAGSFQYEGRAFGGNGVLSKESLDNH
                     NGVFRYTIDFDRRKGSGSIEGMEQYGKIKLEEAAIERIPYRESGSSLGLKDRVSYFGV
                     NEGVAMLEKDNEIKKYHLGIFGEAANEVAGAVSQEHKHQAVIGFGGEKK"
     gene            13684..13926
                     /locus_tag="ACFJCW_000321"
     CDS             13684..13926
                     /locus_tag="ACFJCW_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150569.1"
                     /translation="MKSKNIFFMGYLIASATFAEDIGVPVEPINVGSRAAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGGRSIP"
     gene            14123..14983
                     /locus_tag="ACFJCW_000322"
                     /pseudo
     CDS             14123..14983
                     /locus_tag="ACFJCW_000322"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
     gene            15162..15533
                     /gene="rpsL"
                     /locus_tag="ACFJCW_000323"
     CDS             15162..15533
                     /gene="rpsL"
                     /locus_tag="ACFJCW_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HFC4150570.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            15651..16121
                     /gene="rpsG"
                     /locus_tag="ACFJCW_000324"
     CDS             15651..16121
                     /gene="rpsG"
                     /locus_tag="ACFJCW_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HFC4150571.1"
                     /translation="MPRRREVPKRDVLPDSKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKAAIEVFNEAIANSKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            16140..18245
                     /gene="fusA"
                     /locus_tag="ACFJCW_000325"
     CDS             16140..18245
                     /gene="fusA"
                     /locus_tag="ACFJCW_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HFC4150572.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDSFTGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGEDLAEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            18333..19517
                     /gene="tuf"
                     /locus_tag="ACFJCW_000326"
     CDS             18333..19517
                     /gene="tuf"
                     /locus_tag="ACFJCW_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011793521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HFC4150573.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFGGAA
                     KAYDQIDNAPEEKARGITINTSHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVCSAADGPMPQTREHILLARQVGVPYIIVFMNKCDMVDDAELLELVEMEIRDLLSS
                     YDFPGDDCPIVQGSALKALEGDAAYEEKIFELATALDSYIPTPERAVDKPFLLPIEDV
                     FSISGRGTVVTGRVERGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVG
                     VLLRGTKREDVERGQVLAKPGTITPHTKFKAEVYVLSKEEGGRHTPFFANYRPQFYFR
                     TTDVTGAVTLEKGVEMVMPGENVTITVELIAPIAMEEGLRFAIREGGRTVGAGVVSSV
                     IA"
     gene            19535..19846
                     /gene="rpsJ"
                     /locus_tag="ACFJCW_000327"
     CDS             19535..19846
                     /gene="rpsJ"
                     /locus_tag="ACFJCW_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HFC4150574.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHMNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            complement(19932..20114)
                     /locus_tag="ACFJCW_000328"
     CDS             complement(19932..20114)
                     /locus_tag="ACFJCW_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150575.1"
                     /translation="MDASAQTKPDSTFFRGASLRKVMDKKYPVLFTKKCRLKILEAQN
                     KPISPTALFFDFVVLP"
     gene            complement(20188..20301)
                     /locus_tag="ACFJCW_000329"
                     /pseudo
     CDS             complement(20188..20301)
                     /locus_tag="ACFJCW_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            20632..21276
                     /gene="rplC"
                     /locus_tag="ACFJCW_000330"
     CDS             20632..21276
                     /gene="rplC"
                     /locus_tag="ACFJCW_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HFC4150576.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            21276..21896
                     /gene="rplD"
                     /locus_tag="ACFJCW_000331"
     CDS             21276..21896
                     /gene="rplD"
                     /locus_tag="ACFJCW_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HFC4150577.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLARDERLFVIEALTAETPKTKVFAEQVKNLALEQVLFVTKRLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            21893..22207
                     /gene="rplW"
                     /locus_tag="ACFJCW_000332"
     CDS             21893..22207
                     /gene="rplW"
                     /locus_tag="ACFJCW_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HFC4150578.1"
                     /translation="MNQQRLTQVILAPVVSEKSNVLAEKCNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRILGRRSDVKKAYVSLADGQELDLEAAAAAAD
                     KE"
     gene            22213..23046
                     /gene="rplB"
                     /locus_tag="ACFJCW_000333"
     CDS             22213..23046
                     /gene="rplB"
                     /locus_tag="ACFJCW_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HFC4150579.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGISAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQAGVVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            23052..23330
                     /gene="rpsS"
                     /locus_tag="ACFJCW_000334"
     CDS             23052..23330
                     /gene="rpsS"
                     /locus_tag="ACFJCW_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HFC4150580.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAVRASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            23339..23668
                     /gene="rplV"
                     /locus_tag="ACFJCW_000335"
     CDS             23339..23668
                     /gene="rplV"
                     /locus_tag="ACFJCW_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HFC4150581.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            23678..24370
                     /gene="rpsC"
                     /locus_tag="ACFJCW_000336"
     CDS             23678..24370
                     /gene="rpsC"
                     /locus_tag="ACFJCW_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HFC4150582.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVIIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPIHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            24354..24770
                     /gene="rplP"
                     /locus_tag="ACFJCW_000337"
     CDS             24354..24770
                     /gene="rplP"
                     /locus_tag="ACFJCW_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HFC4150583.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            24770..24961
                     /gene="rpmC"
                     /locus_tag="ACFJCW_000338"
     CDS             24770..24961
                     /gene="rpmC"
                     /locus_tag="ACFJCW_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HFC4150584.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            24961..25224
                     /gene="rpsQ"
                     /locus_tag="ACFJCW_000339"
     CDS             24961..25224
                     /gene="rpsQ"
                     /locus_tag="ACFJCW_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HFC4150585.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHSLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            25446..25814
                     /gene="rplN"
                     /locus_tag="ACFJCW_000340"
     CDS             25446..25814
                     /gene="rplN"
                     /locus_tag="ACFJCW_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HFC4150586.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAVPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            25826..26149
                     /gene="rplX"
                     /locus_tag="ACFJCW_000341"
     CDS             25826..26149
                     /gene="rplX"
                     /locus_tag="ACFJCW_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HFC4150587.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGGKVVVEGVNVVKRHQ
                     KPNPMRGIKGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            26159..26698
                     /gene="rplE"
                     /locus_tag="ACFJCW_000342"
     CDS             26159..26698
                     /gene="rplE"
                     /locus_tag="ACFJCW_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HFC4150588.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLERIAGQRPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            26701..27006
                     /gene="rpsN"
                     /locus_tag="ACFJCW_000343"
     CDS             26701..27006
                     /gene="rpsN"
                     /locus_tag="ACFJCW_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HFC4150589.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            27022..27414
                     /gene="rpsH"
                     /locus_tag="ACFJCW_000344"
     CDS             27022..27414
                     /gene="rpsH"
                     /locus_tag="ACFJCW_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HFC4150590.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            27428..27961
                     /gene="rplF"
                     /locus_tag="ACFJCW_000345"
     CDS             27428..27961
                     /gene="rplF"
                     /locus_tag="ACFJCW_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HFC4150591.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKKLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVASEIRAFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            27975..28328
                     /gene="rplR"
                     /locus_tag="ACFJCW_000346"
     CDS             27975..28328
                     /gene="rplR"
                     /locus_tag="ACFJCW_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HFC4150592.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            28347..28865
                     /gene="rpsE"
                     /locus_tag="ACFJCW_000347"
     CDS             28347..28865
                     /gene="rpsE"
                     /locus_tag="ACFJCW_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HFC4150593.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            28858..29043
                     /gene="rpmD"
                     /locus_tag="ACFJCW_000348"
     CDS             28858..29043
                     /gene="rpmD"
                     /locus_tag="ACFJCW_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HFC4150594.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLRRREHTVEVLDTS
                     ENRGMINKISYLLKVES"
     gene            29045..29479
                     /gene="rplO"
                     /locus_tag="ACFJCW_000349"
     CDS             29045..29479
                     /gene="rplO"
                     /locus_tag="ACFJCW_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HFC4150595.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTVSANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEDVGGKIEM"
     gene            29491..30801
                     /gene="secY"
                     /locus_tag="ACFJCW_000350"
     CDS             29491..30801
                     /gene="secY"
                     /locus_tag="ACFJCW_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HFC4150596.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALLIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRVGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            30806..31024
                     /gene="infA"
                     /locus_tag="ACFJCW_000351"
     CDS             30806..31024
                     /gene="infA"
                     /locus_tag="ACFJCW_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HFC4150597.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            31045..31158
                     /gene="rpmJ"
                     /locus_tag="ACFJCW_000352"
     CDS             31045..31158
                     /gene="rpmJ"
                     /locus_tag="ACFJCW_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HFC4150598.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDPRHKQRQG"
     gene            31224..31586
                     /gene="rpsM"
                     /locus_tag="ACFJCW_000353"
     CDS             31224..31586
                     /gene="rpsM"
                     /locus_tag="ACFJCW_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HFC4150599.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            31606..32001
                     /gene="rpsK"
                     /locus_tag="ACFJCW_000354"
     CDS             31606..32001
                     /gene="rpsK"
                     /locus_tag="ACFJCW_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HFC4150600.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            32021..32641
                     /gene="rpsD"
                     /locus_tag="ACFJCW_000355"
     CDS             32021..32641
                     /gene="rpsD"
                     /locus_tag="ACFJCW_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HFC4150601.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            32667..33653
                     /gene="rpoA"
                     /locus_tag="ACFJCW_000356"
     CDS             32667..33653
                     /gene="rpoA"
                     /locus_tag="ACFJCW_000356"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HFC4150602.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVGGVQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKSPPIDPVLLHPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            33677..34045
                     /gene="rplQ"
                     /locus_tag="ACFJCW_000357"
     CDS             33677..34045
                     /gene="rplQ"
                     /locus_tag="ACFJCW_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HFC4150603.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLASRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            34192..34905
                     /gene="minC"
                     /locus_tag="ACFJCW_000358"
     CDS             34192..34905
                     /gene="minC"
                     /locus_tag="ACFJCW_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HFC4150604.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAVAMKYHLLFCL
                     SHSENVKELGQVEVQKTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVNQGAEL
                     IADGNMHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            34934..35749
                     /gene="minD"
                     /locus_tag="ACFJCW_000359"
     CDS             34934..35749
                     /gene="minD"
                     /locus_tag="ACFJCW_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HFC4150605.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSRKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILRIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            35753..36016
                     /gene="minE"
                     /locus_tag="ACFJCW_000360"
     CDS             35753..36016
                     /gene="minE"
                     /locus_tag="ACFJCW_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HFC4150606.1"
                     /translation="MSLIELLFGRKQKTATVARDRLQIIIAQERAQEGQTPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            36020..36940
                     /gene="oxyR"
                     /locus_tag="ACFJCW_000361"
     CDS             36020..36940
                     /gene="oxyR"
                     /locus_tag="ACFJCW_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HFC4150607.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLKEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIHD"
     gene            complement(37525..38577)
                     /gene="porB"
                     /locus_tag="ACFJCW_000362"
     CDS             complement(37525..38577)
                     /gene="porB"
                     /locus_tag="ACFJCW_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB.IB"
                     /protein_id="HFC4150608.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGAIKAGVQTYRSVEHREGKV
                     VGVGTGSEISDFGSKIGFKGQEDLGNGLKAIWQLEQGASVAGTNSGWGNKQSFIGLKG
                     GFGTIRAGSLNSPLKNTGSKVNAWESGKYTGEFLEISKMAEREHRYLSARYDSPEFAG
                     FSGSVQYAPKDNSGSNGESYHVGLNYRNNGFFAQYAGLFQRYGEGTKKMEGYSYNYNI
                     PSLFVEKLQVHRLVGGYDNNALYASVAAQQQDAKLYQDQLVRDNSHNSQTEVAASVAY
                     RFGNVTPRVSYAHGFKGTVDSADYDNTYDQVVVGAEYDFSKRTSALVSAGWLQKGKGA
                     DKIVSTASAVVLRHKF"
BASE COUNT        10591 a         8006 c         9844 g        10430 t
ORIGIN      
        1 tttagaggcc aatagctcaa ttggtagagt atcggtctcc aaaaccgagg gttgggggtt
       61 cgagaccctc ttggcctgcc aaataaaaaa ttaaccggcc ttgtgccggt taattttttt
      121 gtatttgtta tttagtaaac tctcttgcca tttacatgga ttgagaatag acagatgcta
      181 tgatggataa ataatatgac agaacataca cctgaaaaaa agaatgttaa agtgaatcaa
      241 ctggttgttc aagataaaga atctgcatct aattccggta aggagggttt ttttgcatat
      301 ttctcaaatt cttggtccga attcaaaaag gtggtttggc ctaagcgtga agatgccgtc
      361 agaatgactg tatttgttat agtgtttgtt gctgtgcttt ctatatttat ctatgcggca
      421 gatacagcaa tttcgtggtt attttttgat gtattgctga gaagggaagg ttgagatgtc
      481 gaaaaaatgg tatgttgtac aggcgtattc ggggtttgag aagaatgtcc aacgaatatt
      541 ggaagagcga attgcccgtg aggagatggg agattatttc ggacaaattc tggtgcctgt
      601 agagaaagtt gttgatatcc gcaatggtcg taagactatt agtgaaagaa agtcatatcc
      661 tggttatgtg ttagttgaga tggaaatgac agatgactct tggcatcttg taaaaagcac
      721 tccccgtgtt tctggtttta ttggagggag ggctaataga cccacgccga ttagtcagag
      781 agaggctgaa attattttac agcaggttca gaccggcata gagaagccga aaccaaaagt
      841 tgaatttgag gtcggtcaac aggttcgtgt aaatgaagga ccgtttgcgg attttaacgg
      901 ggtggttgag gaggtcaatt atgaacggaa taagttacgc gtgtctgttc agatatttgg
      961 tagagaaaca cccgttgagc tggagttcag ccaggttgag aagattaact gatttttata
     1021 cttgaaaaaa aagcaataag aggatagaat caaaaactaa cttggggagc ggaaatggtt
     1081 ccgcgtctta cccgttttta ggagtccgtt aagtggcaaa gaaaattatc ggctatatta
     1141 aactgcaaat tcctgcaggc aaagccaatc catccccccc agttggtcct gctttgggtc
     1201 aacgtggttt gaatatcatg gaattctgta aagcatttaa tgctgcaacc caaggtatgg
     1261 aatctggttt gccaattccg gttgtgatta ctgcatttgc agataaatca ttcacatttg
     1321 tgatgaaaac tcctccggct tctattctgt tgaaaaaagc cgccggtttg caaaaaggta
     1381 gttctaatcc tctgacaaac aaggtaggta aattgacccg tgcccagttg gaagaaattg
     1441 ctaaaactaa agagcctgat ttgactgctg ctgacttgga tgcggctgtt cgtactatag
     1501 caggttctgc tcgctcaatg ggcttggacg tggagggtgt tgtataatgg ctaaagtatc
     1561 taaacgcttg aaagttcttc gctcttctgt tgaagctaac aaactgtacg caatcgacga
     1621 agcaattgcc ttggttaaaa aagctgctac cgctaaattt gacgaatctg ttgacgtatc
     1681 tttcaacttg ggcgttgatt ctcgtaaatc tgaccaagtt atccgtggtt cagtcgttct
     1741 gcctaaaggt actggtaaga caacccgtgt ggctgtattt actcaaggtg taaatgcaga
     1801 agctgctaaa gaggctggtg cggatgtcgt cggtttcgaa gatttggctg ctgaaatcaa
     1861 agcaggcaat ctgaactttg atgttgttat tgcttctcct gatgcaatgc gtatcgttgg
     1921 tcaattgggt accatcttgg gtcctcgtgg tctgatgcca aaccctaaaa taggtacggt
     1981 tacccctaat gttgccgaag cggtaaaaaa tgcaaaagca ggtcaagtgc agtaccgtac
     2041 cgacaaggca ggtattgttc atgcaacgat tggtcgtgct tcattcgctg aagctgattt
     2101 gaaagagaac tttgatgcgt tgctggacgc tatcgttaaa gccaaacctg ctgctgctaa
     2161 aggtcagtac ctgaaaaaag ttgctgtatc cagcactatg ggtttaggtg ttcgcgttga
     2221 tacatcaagc gtgaataact aatctaagaa attttcaagc aactctgttt ttgagttgct
     2281 tgaatttggg ctacttaaaa ttaagtagat gtccaagacc gtagggatcg taagatttaa
     2341 tcgtaactgc cctacgcaga cggtagtcct gaaacacatt gcaagattgc ttgtaagatg
     2401 tctttttagg ttaccgcgct ggtgggatat cgttttggta tcctgtttat aaacagtggg
     2461 aggtagacct tgagtctcaa tattgaaacc aagaaagtgg cggtcgagga aattagcgcg
     2521 gcaattgcta atgctcaaac cctcgtagtc gctgaatatc gcggtatcag tgtttccagt
     2581 atgactgagc ttcgtgcgaa tgcacgtaaa gaaggcgttt atttgcgcgt tctgaaaaat
     2641 actctggctc gtcgcgcagt gcaaggtact tcatttgtag aattggccga tcaaatggtt
     2701 ggtccgttgg tttacgctgc ttctgaagat gctgttgctg ctgctaaagt gttgcaccaa
     2761 ttcgcgaaaa aagatgacaa aattgtcgtt aaagccggtt cttacaatgg cgaagtaatg
     2821 aatgctgctc aggttgctga gttggcttct attccgagcc gcgaagagct gttgtccaaa
     2881 ctgttgttcg ttatgcaagc tcctgtatcg ggctttgcgc gcggtttggc tgctttggca
     2941 gagaaaaaag ccggcgaaga agctgcttaa tcgattttgt ttctgttaat caattatttt
     3001 ttaatacaat atttggagta aaatagcatg gctattacta aagaagacat tttggaagca
     3061 gttggttctt tgaccgtaat ggaattgaat gacctggtta aagcttttga agaaaaattc
     3121 ggtgtttctg ctgctgctgt tgcagttgca ggtcctgctg gtgccggtgc tgccgatgct
     3181 gaagaaaaaa ccgaatttga tgtcgttttg gcttctgtcg gcgatcaaaa agtcggcgtg
     3241 attaaagttg tccgtgcaat tactggtttg ggtctgaaag aagctaaaga catcgttgac
     3301 ggcgcaccta aaaccattaa agagggtgtt tctaaagctg aagccgaaga catccaaaaa
     3361 caactggaag cagcaggcgc taaagtcgaa atcaaataat ttgatgcttc ttatgaaggc
     3421 tggcagtttt ctgccagcct tattttgctt cttaaaataa gcattaagta ttgtttacat
     3481 ttatttgcat agtttttatc aaatcattgc aaataaatgt aaatatcaga ttgatgcgta
     3541 ccgttgtttt cagacggcct attattgaaa attacttttc ggagtgtgta tgaactattc
     3601 gtttaccgag aaaaaacgta tccgtaagag ttttgcaaag cgggaaaatg ttttggaagt
     3661 tccttttcta ctggcaaccc aaattgattc ttatgcgaaa tttttgcagc tggaaaatgc
     3721 ttttgacaaa cgtaccgatg acggtctgca agcggcattt aattctattt tcccgattgt
     3781 gagccacaac ggttatgctc gtctggagtt tgtatattac acgctgggcg agcctttgtt
     3841 cgatatccct gaatgtcaat tgcgcggaat cacttatgct gcccctctgc gcgcgcgtat
     3901 ccgtttggtg attttggata aggaagcgtc taaaccgacg gtaaaagaag ttcgtgaaaa
     3961 cgaagtgtat atgggcgaaa ttccgttgat gaccccgagc ggttcttttg tgattaacgg
     4021 cacagagcgt gtgattgttt cccagttgca ccgttcgccc ggtgtgttct tcgagcatga
     4081 caaaggtaag acacactctt ccggcaaatt gttattctcc gcccgcatca ttccctaccg
     4141 tggttcatgg ttggattttg aatttgatcc gaaagatttg ctgtatttcc gtatcgaccg
     4201 ccgccgtaaa atgccggtaa cgattttgtt gaaggctttg ggctacaaca atgagcaaat
     4261 cttggatatt ttctacgaca aagaaacgtt ttatttgtct tcaaacggtg ttcaaaccga
     4321 tttggtcgca ggccgtctga aaggcgaaac tgccaaggtc gatatcttgg ataaagaagg
     4381 caatgtattg gttgccaaag gtaagcgcat tactgcgaaa aatatccgtg atattaccaa
     4441 tgcaggcctg acccgtttgg atgtagaaca ggaaagcctg ctgggcaaag cattggctgc
     4501 cgatttgatt gattcggaaa ccggcgaggt attggcttct gccaatgatg aaattacaga
     4561 agagttgttg gccaaatttg atattaacgg cgtaaaagaa attacgaccc tttacatcaa
     4621 tgagttggat cagggtgctt atatttccaa taccttgcgc acggatgaga ctgccggccg
     4681 gcaggcggcg cgtgttgcga tttaccgtat gatgcgtccg ggcgaaccgc ccaccgaaga
     4741 ggcggtcgag caattgttta accgcttgtt cttcagtgaa gacagctacg atttgtcccg
     4801 cgtaggccgt atgaaattta atacgcgcac atacgaacaa aaactgtccg aagcccaaca
     4861 aaactcttgg tacggccgcc tgttgaacga gacgtttgcc ggtgctgccg acaaaggcgg
     4921 ttatgtcctg agcgtcgaag atattgtcgc ctcgattgcg actttggtcg agttgcgtaa
     4981 cggccatggc gaagtggacg atatcgatca cttgggcaac cgtcgagtac ggtcggtagg
     5041 cgagctgact gaaaaccaat tccgcagcgg tttggctcgt gtggaacgtg ccgtaaaaga
     5101 acgtttgaat caggcggaat cagaaaactt gatgccgcac gacttgatta atgcgaaacc
     5161 cgtttctgcc gccatcaaag aattcttcgg ctccagccaa ttgagtcagt ttatggatca
     5221 gaccaatccc ttgtctgaag taacccataa acgccgtgta tctgcattgg gcccgggcgg
     5281 tttgacccgc gaacgtgccg gcttcgaagt gcgggacgtg catccgaccc actatggacg
     5341 tgtatgtcct attgaaacgc ctgaaggtcc gaacatcggt ttgatcaact cattgtctgt
     5401 ttatgcgcgc accaatgatt acggtttctt ggaaacgcct taccgccgcg ttattgacgg
     5461 caaagtaacc gaggaaattg attacttgtc tgccatcgaa gaaggccgct atgtgattgc
     5521 acaggcgaat gccgatttgg attcagacgg caatctgatt ggcgatttgg ttacctgtcg
     5581 tgaaaaaggc gaaaccatta tggcaacgcc cgaccgcgtc caatatatgg acgtggcaac
     5641 cggtcaggtg gtatccgttg cggcatccct gattccgttc ttggaacacg atgacgcgaa
     5701 ccgcgcattg atgggtgcca acatgcaacg tcaggcagtg ccttgtctgc gtcctgaaaa
     5761 accgatggtc ggtaccggta tcgagcgttc cgttgccgtt gactctgcta ctgcaatcgt
     5821 tgcccgccga ggcggcgtgg tcgagtatgt cgatgccaac cgcgttgtga tccgtgtcca
     5881 tgacgacgaa gcgactgccg gtgaagtggg tgtcgatatt tacaatttgg ttaaattcac
     5941 ccgttccaat caatctacca acatcaacca acgtccggct gtcaaagcag gcgatgtttt
     6001 gcaacgcggc gatttggtgg ccgacggcgc gtccaccgat ttgggcgaat tggctttggg
     6061 tcaaaatatg accatcgcct tcatgccgtg gaacggttac aactacgaag actcgattct
     6121 gatttccgaa aaagtggctg cggacgaccg ctatacttcg attcacattg aggaattgaa
     6181 tgtcgttgcc cgcgatacca agctgggtgc ggaagacatt acccgcgata ttccgaactt
     6241 gtccgagcgt atgcaaaacc gtttggacga atccggtatc gtttacatcg gtgcggaagt
     6301 agaagccggc gatgtgttgg taggcaaggt aacgcctaaa ggcgaaaccc agctgacgcc
     6361 ggaagaaaaa ctgctgcgcg ccatcttcgg cgaaaaagcg tctgacgtaa aagatacttc
     6421 attgcgtatg cctaccggta tgagcggtac ggttatcgac gttcaagtct ttacccgcga
     6481 aggcatccaa cgcgacaaac gcgcccaatc cattatcgat tccgaattga aacgctaccg
     6541 tttggatttg aacgaccaat tgcgtatttt cgacaacgac gcattcgacc gtatcgagcg
     6601 tatgattgtc ggtcagaaag ccaacggcgg cccgatgaag ctggccaaag gcagcgaaat
     6661 cacgaccgaa tatctggcgg gtctgccgag caggcacgat tggttcgata tccgtttgac
     6721 cgatgaagat ttggccaagc agttggaact gattaaattg agcctgcaac aaaaacgcga
     6781 agaagcggat gagttgtatg agatcaagaa gaaaaaactg acccaaggcg acgagctgca
     6841 acccggcgta caaaaaatgg tgaaagtctt tatcgccatc aaacgccgtc tgcaagccgg
     6901 tgacaaaatg gcgggccgcc acggtaataa aggtgtggta tctcgcattc tgcctgtgga
     6961 agacatgccg tacatggcgg acggccgtcc tgtggacatc gtactgaacc cgttgggcgt
     7021 accttcccgt atgaacatcg gtcagatttt ggaagttcac ttgggttggg cggcaaaagg
     7081 tatcggcgag cgcatcgacc gtatgctgaa agagcgacgc aaagccggcg agctgcgcga
     7141 gttcttgaac aaactctaca acggcagcgg taagaaagaa gatttggaca gcctgactga
     7201 tgaagaaatc atcgaattgg cttccaatct gcgtaaaggt gcatctttcg cctctcctgt
     7261 attcgacggt gcgaaagagt ctgaaatccg cgaaatgttg aacttggctt acccaagcga
     7321 agatcctgag gttgagaaac tgggcttcaa cgacagtaaa actcaaatca cgctgtatga
     7381 cggccgttca ggcgaagcat ttgaccgcaa ggttacagtc ggtgtgatgc actatctgaa
     7441 actgcaccac ttggttgacg aaaaaatgca cgcgcgttct accggcccgt acagtctggt
     7501 tactcaacaa cctctgggcg gtaaagctca gtttggcggc caacgtttcg gtgagatgga
     7561 ggtttgggca ttggaagcat acggcgcggc atacacgctg caagagatgc tgactgtgaa
     7621 gtctgacgac gtgaacggcc gtaccaaaat gtacgaaaac atcgtcaaag gcgaacacaa
     7681 aatcgatgcc ggtatgcccg agtccttcaa cgtattggtc aaagagattc gctcactggg
     7741 tttggatatc gatttggaac gctactgata cgggtttcag acggcataag gggagctgtt
     7801 ctgcaggtat gcggggcagc ccgacaatgt ttaaaaacga aatgccgtct gaaagcactg
     7861 tacctttatc catatcgaaa atccgccacg cggtaaaaat atttccttca aggagcagaa
     7921 atgaatttgt tgaacttatt taatccgttg caaaccgcag gtatggaaga agagtttgat
     7981 gccatcaaaa tcggtattgc ctctcccgaa accatccgct catggtctta tggcgaagtt
     8041 aaaaaacctg aaaccatcaa ctaccgtacg ttcaaacccg agcgcgacgg cttgttctgc
     8101 gccaaaatct ttggcccggt caaagactac gaatgcttgt gcggaaaata caaacgattg
     8161 aaatttaaag gcgtaacctg tgaaaaatgt ggcgtagaag ttaccctgtc caaagtgcgc
     8221 cgcgaacgca tgggccatat cgaattggct gcacccgttg cccatatttg gttcttgaaa
     8281 tccctgcctt cccgcttggg tatggtattg aacatgacgt tgcgtgatat cgaacgcgta
     8341 ttgtactttg aagcattcgt ggtgaccgat cccggcatga ctccgttgca acgtcgtcaa
     8401 ttgctgactg aagacgatta ctacaacaaa ctggacgaat acggcgacga cttcgatgcc
     8461 aaaatgggtg cggaaggtat ccgcgaattg ttgcgaacct tggatgtagc aggcgaaatc
     8521 gaaatcctgc gccaagagct tgaatcgacc ggttctgaca ccaaaatcaa aaaaatcgct
     8581 aaacgcttga aagtattgga agccttccat cgttccggta tgaagctgga gtggatgatt
     8641 atggatgtgc tgccggtatt gccgcctgat ttgcgtccgt tggttccgtt ggacggcggc
     8701 cgttttgcca cttccgattt gaacgatttg taccgccgcg tcatcaaccg caacaaccgt
     8761 ctgaaacgcc tgctggaact gcatgcgcct gacatcatcg tccgcaacga aaaacgtatg
     8821 ttgcaagaag cggttgactc gctgttggat aacggccgtc gcggtaaagc catgaccgga
     8881 gccaacaaac gtccgctgaa atcgttggca gatatgatta aaggtaaagg cggccgcttc
     8941 cgtcaaaacc tgttgggcaa acgtgtggac tactccggcc gttccgtgat taccgtaggc
     9001 ccatacctgc gtctgcacca atgcggtttg ccgaaaaaaa tggcgttgga actgttcaaa
     9061 ccatttattt tccacaaatt ggaaaaacaa ggtttggcgt ctaccgttaa agctgcgaaa
     9121 aaattggtag aacaagaagt acctgaagta tgggatatct tggaagaagt catccgcgaa
     9181 catccgatta tgttgaaccg tgcgccgacc ctgcaccgtt tgggtattca agcgttcgag
     9241 cctattctga tcgaaggtaa agcgattcag ttgcacccat tggtgtgtgc cgcatttaat
     9301 gccgactttg acggtgacca aatggcagta cacgttccat tgagcttgga agcgcaaatg
     9361 gaagcacgca cgctgatgct ggcttcaaac aacgtattgt ctcctgccaa cggcgaaccg
     9421 attatcgtac cttcccaaga catcgtattg ggtctgtact acatgacccg cgaccgtatc
     9481 aatgccaaag gcgagggcag cctgtttgcc gatgtgaaag aagtgcatcg tgcataccat
     9541 accaaacagg tcgagctggg tacaaaaatc accgtacgtc tgcgcgaatg ggtgaaaaac
     9601 gaagcaggtg agtttgagcc tgtcgttaac cgttacgaaa caaccgtcgg ccgtgcattg
     9661 ttgagcgaaa tcctgccgaa aggcctgccg tttgaatatg tcaacaaagc gttgaagaaa
     9721 aaagaaattt ccaagctgat taacgcatcg ttccgcctgt gcggcttgcg cgatacggtt
     9781 atcttcgccg accacctgat gtacaccggt ttcggatttg cggcaaaagg cggtatttcc
     9841 attgccgttg acgatatgga aattccaaaa gaaaaagcgg ccttgctggc tgaagccaat
     9901 gccgaagtta aagaaatcga agaccaatac cgtcaaggtt tggttaccaa cggcgaacgc
     9961 tacaacaaag tggtcgatat ttggggtcgt gccggcgata agattgctaa agcgatgatg
    10021 gacaacctgt ccaaacaaaa agttatcgac cgtgacggca acgaagtcga tcaagagtca
    10081 ttcaactcca tttatatgat ggcggactcc ggtgcccgtg gttctgcggc tcagattaaa
    10141 cagttgtccg gtatgcgcgg tttgatggcg aaacctgacg gatcgattat tgaaacgccg
    10201 attacctcaa acttccgcga aggtctgacc gtattgcaat actttattgc gacccacggt
    10261 gcgcgtaagg gtttggcgga taccgcgttg aaaaccgcga actccggtta cctgacccgt
    10321 cgtctggtag acgtaactca agacttggtc gttgttgaag acgattgcgg tacttcagac
    10381 ggctttgtca tgaaggcagt ggtacaaggc ggtgatgtga ttgaagcatt gcgcgatcgt
    10441 attttgggtc gtgttaccgc gtctgacgtt gtcgatccgt caagcggcga gactttggtt
    10501 gaagccggta cgttgttgac tgaaaaactg gtggatatga ttgaccaatc cggtgtcgat
    10561 gaagtcaaag tccgtactcc gattacttgt aaaacccgcc acggtctgtg cgcgcactgt
    10621 tacggccgcg acttggcgcg cggcaaactg gtcaatgccg gcgaggcagt cggcgtgatt
    10681 gcggctcagt ctattggtga accgggtacc cagttgacca tgcgtacgtt ccacatcggt
    10741 ggtgcggcat cccgtgcggc agcagccagc caagtcgaag ccaaatccaa cggtacggca
    10801 cgtttcagca gccaaatgcg ttatgttgcc aacaacaaag gcgagttggt tgtcatcggc
    10861 cgttcttgcg aagtcgtgat tcacgatgac atcggccgtg aacgcgaacg ccacaaagta
    10921 ccttacggtg ccatcctgct ggtacaagac ggtatggcca ttaaagccgg tcaaaccttg
    10981 gcaacttggg atccgcatac ccgtccgatg attaccgaac atgcaggtat ggtgaaattc
    11041 gagaacatgg aagagggcgt taccgttgca aaacaaaccg atgatgtaac cggtttgtcc
    11101 gctttggtag tgattgacgg taaacgccgt tcctctagtg cttccaaact gctgcgtccg
    11161 actgtgaaac tcttggacga aaacggcgtg gaaatctgta ttcccggtac gtccactccg
    11221 gtttcgatgg cattccccgt tggtgcggtg attaccgtac gcgaaggtca ggaaatcggt
    11281 aaaggcgacg tattggcgcg tattccgcaa gcctcttcca aaacccgcga cattaccggc
    11341 ggtctgccgc gcgttgccga gctgtttgaa gcacgcgtgc cgaaagatgc cggtatgctg
    11401 gcggaaatta ccggtaccgt ttccttcggt aaggagacca aaggcaaaca acgtctgatt
    11461 atcactgacg tggacggtgt agcatacgag actttgattt ccaaagagaa acaaattctg
    11521 gtacatgacg gtcaagtggt aaaccgaggc gaaaccattg tggacggcgc ggtcgatccg
    11581 cacgatattc tgcgtctgca aggtatcgaa gcactggcac gctacattgt ccaagaggtg
    11641 caagaggttt accgcctgca aggtgtgaag atttccgata aacacatcga agtcatcatc
    11701 cgtcaaatgt tgcgccgtgt gaacattgcg gatgccggcg aaaccgggtt tattaccgga
    11761 gagcaggtcg aacgcggcga tatgatggcg gccaatgaaa aagctttgga agaaggcaaa
    11821 gagccggcac gttacgaaaa catattgctg ggtattacca aagcctccct gtccaccgac
    11881 agcttcattt ctgccgcatc gttccaagaa accacccgtg tgttgaccga agctgccatc
    11941 atgggcaaac aagacgaact gcgcggtctg aaagagaatg tcatcgtcgg tcgcctgatt
    12001 cctgccggta ccggtttgac ttatcaccgc agccgtcatc agcaatggca aggggtagag
    12061 caggagactg ctgaaaccca agtaacggat gaataatctt cggcgcgttc attcaataaa
    12121 aaaccgcaag ccttgagctt gcggtttttc tttgtccgat taaggcaaaa acaagcgttt
    12181 tcgtcatttt gaggcgtgtg gatataagcc cgataagtgt cccatatctt cgtgccgtca
    12241 aattatgcat cgaatagaac gagttaaatc cgaaggttat tgtgttaaat attgcaaaaa
    12301 tactttaaaa atttcgcacg gtggggggta gaattcccag acttaaagct taagtttttt
    12361 taacaaagtt tgggggagtc taaatgaaag tatctcaatc agcaatgaat aaacttgtta
    12421 ttgctgttat tgcttctatg gggctaacag cgtgcgcggg tggcggttcc gattcatcta
    12481 tgtcggttca accaagcgtt tcggaacaac tgaaagacaa tgcaaatgtt gatgcgaaag
    12541 atgaaaaagt tattgaatat ctgaagaaat catcattaaa agatgtacca aaagaattgc
    12601 aagccaaagt attaaaggtt aaaggtgatg aatatacagg agtgcgaaaa caatatgcag
    12661 gtaagctcgg taagggtgaa tctgtcaagg caatgctatt tctagacggc gaagagccgt
    12721 ttagtaagga acaacttcag aagatggatg tatatgttaa tggtaaaaaa tacgaaggta
    12781 gtaagggggg gaactagatg ttctccccaa aggtttgagt gagcaaaaga ttgagtttta
    12841 cggtgcggat aaagaacaga attatgcgct attaaaaact tgggtttatg agcaaccgta
    12901 ttctgtggtt agaggctatt ttggctacag tcgaaaagac ggtaatccta tagaagagga
    12961 tggacaaaat cctgaagaga ttccttttga cttgtatctg ggcgacatta gaggcgtggc
    13021 aacagatgaa gacaaattac ccaaggctgg gagctttcaa tatgaaggtc gggcatttgg
    13081 cggtaatggg gttttatcca aagaatcgtt agataaccat aatggcgtat ttagatacac
    13141 aattgatttt gatcgtagaa aaggctctgg ctcaattgaa ggaatggaac aatatggcaa
    13201 gatcaaatta gaagaagctg ctattgagag aatcccttat cgagagtccg gctccagctt
    13261 ggggttgaaa gaccgggttt cttatttcgg cgtgaacgaa ggggtggcta tgttagagaa
    13321 ggataatgag attaaaaagt atcatttggg tattttcggc gaagcggcta atgaagtagc
    13381 aggtgctgta agccaagagc ataaacatca agctgttatc ggtttcggcg gcgagaagaa
    13441 atagagaaag cactatttct atttagtgcc gtttgtccgg gcaagatgcc gtctgaagtt
    13501 tcagacggca ttttcttcaa aaaacagtcc gccaaatcga atactgccaa gcggcaatgc
    13561 aatacctcaa aacagcaata atttctttta aaacagttga ttcttactga acataaatgg
    13621 ccgggcaata cgaaaagaaa aatggcgttg ctgggcattt tatttgaatt tgttatgaaa
    13681 ttgatgaaat ctaaaaatat cttttttatg ggatacctaa tcgcttcggc gacgtttgcc
    13741 gaggatatcg gcgtgcctgt cgaaccgatt aacgtcggta gtcgggctgc gatgccgtct
    13801 gaaggggaaa gcctcgccct cctgccgttt gcagaggatg tgccgccggt tcgcgatgca
    13861 atgccgtctg aagttcctaa aagcgcggca ggcggcgatg ttcgaggcgg ccgatctata
    13921 ccgtgagttg ttgtcggaaa gacccgatct tgtttatccc cgttttgatt tgggcgtgat
    13981 gctgtttgaa gacaaacaat atcgtgaggc attggttcag ttgcaccggg ccgaggaggt
    14041 gttgccgccc gatatgcggc agcttgcacg ggaatatatc cgtcaggcgg aagcggtgca
    14101 ggcgtggcat ccttcgttca atatgaacta tgaacaaaca gataatgtaa acaatgcgtc
    14161 cctttcacgg gacatcgtca tcaacggccg gaaatggata aaatcggaag acagcctgcc
    14221 caaacgcgcc aacgggataa ggtacgaact gggcgttgat cggatgttta acatggcagg
    14281 caatcacttt gcccgcttag gcatcagcgg ttccggtgtg cattattgga atgcccggga
    14341 ttttagcgaa caggcgtttc atgccgaagt aggctaccgt tatcggaata gccgtctaga
    14401 gtggggattc cggccctttg tcaaacaaaa ccggctgggc aataaccgtt atacggcaaa
    14461 tacgggtatt gtgttggatt acagccgccg tctgaatgaa aaatggcgca gcacccaatc
    14521 tttccagtat gaccgcaaac aataccatga cgaatatttg gcaaaacgtt acaacagtaa
    14581 aacgatttcg gtgagcggta cgttcagcta ttacgctatg tcggcttggc agttgtacgg
    14641 gggtattagc ggtatgtttg ataatactgt ggagaaagag caggcttcac ggcgttatgg
    14701 tgtaagtttg ggtacggtga aaatattaga cggcggtctt ggactgaagt tgggtgcggg
    14761 ttacacgaaa cggatattta aagcccctgc aacattaatt tacaatttta ctcggcgtga
    14821 tgattaacat cggatgagcg cggctttatg gcataaaaaa ctgtcgtgga aaggatttac
    14881 accccaaata aatttccgtt acaacaagaa caacagcaat atgcccgcct tttattcgca
    14941 cagcggcaag ggatggtttg tcagtatgga aaaaacgtat tgacagtatt ttctccagcc
    15001 gtccgactga ttgtgaggga tgtcggtaaa tatttatcgg caaacaagaa aatcatcttt
    15061 tttcttgtcg ttatgcttga ctgtctgctt gcaataaaaa tataattcca cccttgccga
    15121 catggtgtcg gcaagtattt aactcaacag gacgagaaaa tatgccaact atcaaccaat
    15181 tggtacgcaa aggccgtcaa aagcccgtgt acgtaaacaa agtgcccgca ctggaagcct
    15241 gcccgcaaaa acgcggcgtg tgcacccgtg tatacacgac tacccctaaa aaacctaact
    15301 ctgcattgcg taaagtatgt aaagtccgcc tgaccaacgg ttttgaagtc atttcatata
    15361 tcggcggtga aggccacaac ctgcaagagc acagcgtcgt actgattcgc ggcggccgtg
    15421 taaaagactt gccgggtgta cgttaccaca ctgtacgcgg ttctttggat actgcaggtg
    15481 ttaaagaccg caaacaagcc cgttctaaat acggtgctaa gcgtcctaaa taattaccgg
    15541 gactcaaata ggcacgtcgg ccgcctaagc tgaacaacgg ccgagtaagt gaatactcaa
    15601 ttgggtattc atgggaatag acccgactga atagattaaa ggaaattaaa atgccaagac
    15661 gtagagaagt ccccaagcgc gacgtactgc cagattctaa attcggtagc gtcgagttga
    15721 ccaaattcat gaacgtattg atgattgacg gtaaaaaatc cgttgccgag cgtatcgttt
    15781 acggtgcgtt ggaacagatt gagaaaaaaa ccggcaaagc agcaatcgaa gtatttaacg
    15841 aagccattgc aaactccaaa cctatcgtgg aagtgaaaag ccgccgtgta ggtggtgcaa
    15901 actaccaagt tcctgttgaa gttcgtcctt cacgccgtct ggctttggca atgcgttggg
    15961 ttcgcgacgc ggcccgcaaa cgtggtgaga aatccatgga tctgcgtttg gcaggcgagt
    16021 tgattgatgc gtccgaaggc cgtggcggtg cgttgaaaaa acgtgaagaa gtacaccgta
    16081 tggctgaagc caacaaagca ttctctcact tccgtttcta attttgaaag gctaataaaa
    16141 tggctcgtaa gaccccgatc agcctgtacc gcaacatcgg tatttccgcc catatcgatg
    16201 cgggtaaaac cacgacgaca gaacgtattt tgttctatac cggtttgacc cacaagctgg
    16261 gcgaagtgca tgacggtgcg gctactaccg actacatgga acaagagcaa gagcgcggta
    16321 ttaccattac ctccgctgcc gttacttcct actggtccgg tatggcgaaa caattccccg
    16381 agcaccgctt caacatcatc gacaccccgg ggcacgttga ctttaccgta gaggtagagc
    16441 gttctatgcg tgtattggac ggcgcggtaa tggtttactg tgcggtgggc ggtgttcaac
    16501 cgcaatctga aaccgtatgg cggcaagcca acaaatacca agttccgcgc ttggcgtttg
    16561 tcaataaaat ggaccgccaa ggtgccaact tcttccgcgt tgtcgagcaa atgaaaaccc
    16621 gtttgcgcgc aaaccccgta cctatcgtca ttccggtagg cgcggaagac agtttcaccg
    16681 gtgttgtcga tttgctgaaa atgaaatcta tcatctggaa tgaagccgat aaaggtacaa
    16741 cctttaccta tggcgatatt cctgccgaat tggtcgaaac tgccgaagaa tggcgtcaaa
    16801 atatgattga agccgcagcc gaagccagcg aagaactgat ggacaaatac ttgggcggtg
    16861 aagatctggc cgaagaagaa atcgtaggcg cgttgcgtca acgtactttg gcaggcgaaa
    16921 ttcagcctat gctgtgcggt tctgcattta aaaacaaagg tgttcaacgt atgttggacg
    16981 cagttgtaga attgctgcca gctcctaccg atattcctcc ggttcaaggt gttaatccta
    17041 acactgaaga agccgacagc cgtcaagcca gcgatgaaga gaaattctct gcattggcat
    17101 tcaaaatgtt gaacgacaaa tacgtcggtc agctgacctt tatccgcgtt tactcaggcg
    17161 tagtaaaatc cggcgatacc gtactgaatt ctgtaaaagg cactcgcgaa cgtatcggtc
    17221 gtttggtgca aatgactgcc gcagaccgta ctgaaatcga agaagtacgc gctggcgaca
    17281 tcgcagccgc tatcggtctg aaagacgtta ctaccggtga aaccttgtgt gcggaaagcg
    17341 cgccgattat cttggaacgt atggaattcc ccgagccggt aatccatatt gccgttgagc
    17401 cgaaaaccaa agccgaccaa gagaaaatgg gtatcgccct gaaccgcttg gctaaagaag
    17461 acccttcttt ccgcgttcgt acagacgaag aatccggtca aaccattatt tccggtatgg
    17521 gtgagctgca cttggaaatt attgttgacc gtatgaaacg cgaattcggt gtggaagcaa
    17581 atatcggtgc acctcaagtg gcttaccgtg aaactatccg caaagccgtt aaagctgaat
    17641 acaaacatgc aaaacaatcc ggtggtaaag gtcaatacgg tcacgttgtg attgaaatgg
    17701 aacctatgga accgggtggt gaaggttacg agtttatcga tgaaattaaa ggtggtgtga
    17761 ttcctcgcga atttattccg tctgtcgata aaggtatccg cgatacgttg cctaacggta
    17821 tcgttgccgg ctatcctgta gttgacgtac gtatccgtct ggtattcggt tcttaccatg
    17881 atgtcgactc ttcccaattg gcatttgaat tggctgcttc tcaagcgttt aaagaaggta
    17941 tgcgtcaagc atctcctgcc ctgcttgagc cgattatggc agttgaagtg gaaactccgg
    18001 aagaatacat gggcgacgta atgggcgact tgaaccgccg tcgcggtgtt gtattgggta
    18061 tggatgatga cggtatcggc ggtaaaaaag tccgtgccga agtacctctg gcagaaatgt
    18121 tcggttactc gaccgacctg cgttctgcaa cccaaggccg cgctacttac tctatggagt
    18181 tcaagaaata ttctgaagct cctgcccaca tagctgctgc tgtaactgaa gcccgtaaag
    18241 gctaatcagg caaataggcc gtctgaaagg ctgaaatgat ttttcagatg gcattgttct
    18301 ttaatcgatc tttaatgtaa aggaattagc tcatggctaa ggaaaaattc gaacgtagca
    18361 aaccgcacgt aaacgttggc accatcggtc acgttgacca tggtaaaacc accctgactg
    18421 ccgctttgac tactatttta gctaaaaaat tcggcggcgc tgcaaaagct tacgaccaaa
    18481 tcgacaacgc acccgaagaa aaagcacgcg gtattaccat taacacctcg cacgtagaat
    18541 acgaaaccga aacccgccac tacgcacacg tagactgtcc gggtcacgcc gactacgtta
    18601 aaaacatgat taccggcgcc gcacaaatgg acggtgcaat cctggtatgt tctgctgccg
    18661 acggccctat gccgcaaacc cgcgaacaca tcctgctggc ccgtcaagta ggcgtacctt
    18721 acatcatcgt gttcatgaac aaatgcgaca tggtcgacga tgccgagctg ttggaactgg
    18781 ttgaaatgga aatccgcgac ctgctgtcca gctacgactt ccccggcgac gactgcccga
    18841 tcgtacaagg ttccgcactg aaagccttgg aaggcgatgc cgcttacgaa gaaaaaatct
    18901 tcgaactggc taccgcattg gacagctaca tcccgactcc cgagcgtgcc gtggacaaac
    18961 cattcctgct gcctatcgaa gacgtgttct ccatttccgg ccgcggtacc gtagtcaccg
    19021 gccgtgtaga gcgaggtatc atccacgttg gtgacgagat tgaaatcgtc ggtctgaaag
    19081 aaacccaaaa aaccacctgt accggcgttg aaatgttccg caaactgctg gacgaaggtc
    19141 aggcgggcga caacgtaggc gtattgctgc gcggtaccaa acgtgaagac gtagaacgcg
    19201 gtcaggtatt ggccaaaccg ggtactatca ctcctcacac caagttcaaa gcagaagtgt
    19261 acgtattgag caaagaagag ggcggccgcc ataccccgtt tttcgccaac taccgtcccc
    19321 aattctactt ccgtaccact gacgtaaccg gcgcggttac tttggaaaaa ggtgtggaaa
    19381 tggtaatgcc gggtgagaac gtaaccatta ctgtagaact gattgcgcct atcgctatgg
    19441 aagaaggtct gcgctttgcg attcgcgaag gcggccgtac cgtgggtgcc ggcgtggttt
    19501 cttctgttat cgcttaattg aaggatattg ataaatggca aaccaaaaaa tccgtatccg
    19561 cctgaaagct tatgattacg ccctgattga ccgttctgca caagaaatcg ttgaaactgc
    19621 aaaacgtacc ggtgctgttg taaaaggccc gattcctttg ccgaccaaaa tcgagcgttt
    19681 caacattttg cgttctccgc acatgaacaa aacttcccgt gaacaattgg aaatccgcac
    19741 ccatttgcgc ctgatggaca tcgtggattg gaccgataaa actaccgatg cgctgatgaa
    19801 gctggatttg ccggccggtg ttgatgtaga aatcaaagtc caataattcg gactgtcgaa
    19861 aatccccaag caatcaatgc ttggggattt tttatgttat gccgtctgaa aatatgcggc
    19921 ggcaaacaga tttaaggcaa aacaacaaaa tcaaaaaaca gtgcggtcgg tgaaatcggc
    19981 ttattttgtg cctcaagaat tttcagacgg cattttttag tgaacaaaac aggatatttt
    20041 ttatccataa ctttcctaag gcttgccccc cgaaaaaagg tagaatcggg cttggtttgg
    20101 gcagaagcat ccatctgatt ctaaggatgg atgatgtttt attctcaagt aaataaagga
    20161 aagatgatga gcctactaat gtctttaaag atatagtgga ttaaatttaa accggtacgg
    20221 cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc ttcgtcgctt tgtcctgatt
    20281 taaatttaat ccactatatt ttaaacaaca aagaattgaa tttggaagaa cggcatgatt
    20341 tggagcgggc ggttaagatc ttgcaggaca cgcacgtcat cccggtttgt cggagaaaga
    20401 tgcatacgcc gtgatggtcg gataccgaca ctttaaaagc atccgacccc atgccttctg
    20461 aagattcaaa acgcttcaga cggcatattg aagatatttc tgatatttct gttgatattt
    20521 ctttgacttg tcggatataa tgtcaagctt ggtacatttt tgccaagttt aactttgtct
    20581 gaaagacagg ccaatcgcag cctgtccctt tactttaaaa ggaaaataat catgacttta
    20641 ggtctggttg gacgcaaagt tggtatgacc cgcgtgttcg acgagcaggg tgtttctgtt
    20701 ccggtaaccg ttttggatat gtctgccaac cgcgttacac aagtaaaatc caaagatact
    20761 gacggctata ccgccgttca agttaccttt ggtcagaaaa aagccaatcg tgtcaacaaa
    20821 gccgaagccg gacactttgc aaaagcaggt gttgaagccg gtcgcggttt gattgagttt
    20881 gctttgactg aagaaaaact ggctgaattg aaagccggtg acgaaatcac cgtttctatg
    20941 tttgaagtcg gtcaactggt cgatgtaacc ggtacctcta aaggtaaagg tttctccggc
    21001 acgatcaaac gtcataactt cggtgcccaa cgtacttccc acggtaactc ccgttctcac
    21061 cgcgttccag gctctatcgg tatggcgcaa gacccgggtc gcgtgttccc cggtaagcgc
    21121 atggccggcc aatacggcaa caccaaagca actgttcaaa aattggaagt tgtccgtgtt
    21181 gatgcagaac gccaactgct gttggttaag ggtgctgttc cgggtgcggt caacagcgat
    21241 gttgtagttc gtcccagcgt gaaagtaggt gcgtaatgga attgaaagta attgacgcta
    21301 aaggacaagt ttcaggcagc ctgtctgttt ctgatgcttt gttcgcccgc gaatacaatg
    21361 aagcgttggt tcaccagctg gtaaatgcct acttggcaaa cgcccgctct ggtaaccgtg
    21421 ctcaaaaaac ccgtgccgaa gtaaaacact caaccaaaaa accatggcgt caaaaaggta
    21481 ccggccgcgc ccgttccggt atgacttctt ctccgctgtg gcgtaaaggc ggtcgcgcgt
    21541 tcccgaacaa acccgacgaa aacttcactc aaaaagtaaa ccgtaaaatg taccgtgccg
    21601 gtatggcgac tatcctgtcc caattggcgc gtgacgagcg tttgtttgtg attgaggcgt
    21661 tgactgccga aactcccaaa accaaagttt ttgccgaaca agtaaaaaat ttggctctgg
    21721 agcaagtgct gtttgtaacc aaacggctcg acgagaatgt ttacttggct tcacgcaact
    21781 tgccaaacgt attggttttg gaagctcaac aagttgatcc ttacagcttg ctgcgttata
    21841 aaaaagtaat catcactaaa gatgcggttg cacaattaga ggagcaatgg gtatgaatca
    21901 acaacgtttg actcaagtaa tcttggcgcc tgtcgtttct gaaaaaagca acgtattggc
    21961 tgaaaaatgc aaccaaatga cgtttaaagt cttggcaaat gcaaccaaac ctgaaatcaa
    22021 agctgctgtc gagctgctgt tcggtgttca agttgcttct gtaactaccg ttaccactaa
    22081 aggcaaaact aagcgttttg gtcgtatttt gggtcgccgc agcgatgtta aaaaagctta
    22141 tgtaagcttg gctgacggtc aagagttgga tttggaagcc gctgctgcag ctgcagataa
    22201 ggaataaaca aaatggcaat cgttaaaatg aagccgacct ctgcaggccg tcgcggcatg
    22261 gttcgcgtgg taacagaagg tttgcacaaa ggtgcacctt atgcaccctt gcttgaaaag
    22321 aaaaattcta ctgccggccg taacaataat ggtcatatca ccacccgtca caaaggcggc
    22381 ggtcataaac accattaccg tgttgtagac tttaaacgta acaaagacgg catttctgct
    22441 aaagtagagc gtatcgaata cgatcctaac cgtactgcct tcatcgcact gttgtgctat
    22501 gcagacggcg agcgtcgtta catcatcgct cctcgcggta ttcaagccgg tgtcgtattg
    22561 gtttccggtg ctgaagctgc catcaaagta ggcaacaccc tgccgatccg caacattccc
    22621 gttggtacga ctatccactg tatcgaaatg aaacccggta aaggtgctca aatcgcacgt
    22681 tctgccggtg cttctgcggt attgttggct aaagaaggtg catacgctca agtccgtctg
    22741 cgctctggcg aagttcgtaa aatcaacgta gattgccgtg cgaccatcgg tgaagtcggt
    22801 aacgaagagc aaagcctgaa aaaaatcggt aaagccggtg ctaaccgttg gcgcggtatt
    22861 cgtccgaccg tacgcggtgt tgtcatgaat cccgtcgatc acccgcatgg tggtggtgaa
    22921 ggccgtaccg gcgaagcccg cgaaccggtt agtccatggg gtactcctgc taaaggctac
    22981 cgcactcgta ataacaaacg cacggataat atgattgttc gtcgccgtta ctcaaataaa
    23041 ggttaattag tatggctcgt tcattgaaaa aaggcccata tgtagacctg catttgctga
    23101 aaaaagtaga tgctgttcgc gcaagcaacg acaaacgccc gattaaaacc tggtctcgtc
    23161 gttctaccat tctgcctgat tttatcggtc tgaccattgc cgtgcacaac ggtcgcaccc
    23221 atgtgcctgt gtttatcagc gacaatatgg ttggtcataa attaggcgaa ttctcattga
    23281 cccgtacctt taaaggccac ctggccgata aaaaggctaa aaagaaataa ggtgaatcat
    23341 gagagtaaat gcacaacata aaaatgcccg tatctctgct caaaaggctc gtttggtagc
    23401 tgatttgatt cgtggtaaag acgttgccca agctttgaat attttggctt tcagccctaa
    23461 aaaaggtgcc gagctgatca aaaaagtatt ggagtcagct attgctaatg ctgagcataa
    23521 taacggtgcg gacattgatg aactgaaagt ggtaactatc tttgttgaca aaggtccaag
    23581 cttgaaacgt tttcaagctc gcgccaaagg tcgcggtaac cgcatcgaaa aacaaacttg
    23641 tcatatcaat gtgacagtgg gtaactaagg aaaagctatg ggacaaaaga ttaaccctac
    23701 aggctttcgc ctggcggtaa ctaaagactg ggcttcaaaa tggtttgcta aaagtaccga
    23761 cttttctact gttttgaagc aggatatcga tgttcgcaat tatttgcgtc aaaaattggc
    23821 caatgcttcg gttggtcgag taattattga acgccctgca aaatctgcac gcattaccat
    23881 tcactccgct cgtccgggtg tggttatcgg taaaaaaggt gaggatatcg aagttttgaa
    23941 acgtgacttg caagtcttga tgggtgtacc tattcatgta aatattgaag agattcgccg
    24001 tcctgagttg gatgctcaaa ttattgctga cggtatcgcc cagcagttgg aaaaacgcgt
    24061 tcaattccgt cgtgctatga aacgagcaat gcaaaatgca atgcgttctg gtgctaaagg
    24121 cattaagatt atgacttcag gccgtctgaa tggtgcggat attgcccgta gcgaatggta
    24181 tcgtgaaggt cgcgtgccac tgcatacttt acgtgcaaat gtagattatg caaccagcga
    24241 agcgcacacc acatatggtg tattgggtct gaaagtttgg gtttatacgg aaggcaatat
    24301 taaatcttcc aaacctgaac atgagagtaa acaaagaaag gcaggtagac gtaatgctgc
    24361 agccaactag actgaaatac cgtaagcaac aaaagggtcg caataccggc atcgctactc
    24421 gcggtaataa ggtaagtttc ggtgagttcg gcttgaaagc cgtaggtcgt ggtcgtttga
    24481 ctgcccgtca aatcgaagct gctcgtcgtg caatgacccg tcacatcaaa cgtggtggtc
    24541 gtatttggat tcgtgtattc cctgacaaac cgattactga aaagcctatt caagttcgta
    24601 tgggtggcgg taaaggtaac gtggaatatt acattgccga aattaaacca ggtaaagtgt
    24661 tgtatgaaat ggatggcgtt ccagaggaac tggctcgtga agcattcgag ttggctgctg
    24721 ccaaattgcc tattcctaca acctttgtag taagacaggt gggtcaataa tgaaagcaaa
    24781 tgaattgaaa gacaaatccg ttgagcagtt gaatgcagat ttgttggact tgttgaaagc
    24841 tcagtttggc ttacgtatgc aaaacgctac cggtcaatta ggcaaaccaa gtgaattgaa
    24901 acgtgtacgt cgcgatattg ctcgtattaa aaccgtttta actgaaaaag gtgctaagta
    24961 atgagcgaaa ctaaaaatgt tcgtactttg caaggcaaag tagtaagcga caaaatggat
    25021 aaaaccgtaa cagtattggt tgagcgtaaa gtaaaacatt cgctgtatgg taagattatt
    25081 cgattatcta ctaaaatcca tgcccatgat gaaaataatc aatatggaat tggtgatgtg
    25141 gttgttatat cggaatcccg tccattgtca aaaactaaat cttgggttgt cagtgagttg
    25201 gttgagaaag cacgttctat ttaagaatta aagcaacgtg cttggaatgg gaaacgaagt
    25261 attgcagcaa atttaatttg cgtgtaaact tcgtttcctg tcttccagtt tcttctggaa
    25321 gtttcttccc tttcgggatc caagactggt ttacttgaac cgcaaggttt catttaataa
    25381 gcagcggctt tgctgtaagt tatctgaaag tggtaaatta agttggttaa tttaaaggta
    25441 ataatatgat tcaaatgcag accatcttag atgtggctga taactctggt gcgcgtcgcg
    25501 taatgtgtat caaggtattg ggcggatcta agcgtcgcta cgcttctgtt ggcgatatta
    25561 ttaaagtggc agttaaagat gcggttccgc gtggccgtgt caaaaaaggc gatgtatata
    25621 atgcggtagt tgttcgtact gctaagggtg tgcgtcgtcc tgatggtgcg ttaattaaat
    25681 tcgataacaa tgccgccgtg ttgctgaata ataaacttga acctttgggt actcgtatct
    25741 ttggtccggt aacccgtgaa ttgcgtactg agcgatttat gaaaatcgtt tcattggcac
    25801 ctgaagtatt ataaggaata gcacgatgaa taaaatcatt aaaggcgata gggttgtagt
    25861 aattgctggt aaggataaag gtaagcaggg tcaagtagtt cgagtgttgg gtggtaaagt
    25921 tgttgttgag ggcgttaatg ttgtaaaacg ccatcaaaaa cctaatccaa tgcgtggcat
    25981 taagggcggt attattacta aagaaatgcc tttggatatt tctaatatcg caatcctgaa
    26041 tccggaaact aataaagcgg accgtgttgg tattaagctg attgaaaatg aaggcaaagt
    26101 taaacgcgtt cgtttcttca aatcaaatgg ctctatcatt ggagcataag gagataacat
    26161 ggctcggttg agagagtttt ataaagagac agttgttcct gaattggtta aacaatttgg
    26221 ttacaaatca gtaatggaag tcccgcgtat tgaaaaaatc accttgaata tgggtgtggg
    26281 tgaggctgtt gctgacaaaa aagttatgga acatgctgtt tccgatttag agagaattgc
    26341 cggtcaaaga ccggttgtta ctgttgcccg taaatctatc gcaggtttta aaatccgtga
    26401 taactatccg gttggttgca aagtaacatt gcgtcgtgat caaatgtttg aattcttgga
    26461 tcgtttgatt actattgcat tacctcgcgt acgtgacttc cgtggtgtga gcggtaaatc
    26521 atttgatggc cgtggcaatt acaatatggg tgttcgtgag caaattattt tcccggaaat
    26581 tgaatacgat aaaattgatg ctttgcgtgg tttgaatatt actattacta ctacagcaaa
    26641 aaccgatgag gaagcgaaag ctttattgtc attgtttaaa tttccgttca aaggataatc
    26701 atggctaaga aagcacttat taatcgtgat ctgaaacgtc aagctttggc taaaaaatat
    26761 gcggctaaac gcgcggcaat taaagcggta atcaatgatt cgaatgcaac tgaggaagag
    26821 cgttttgagg ctcgtttgag gtttcaatcc attcctcgta atgcggcacc tgtgcgtcaa
    26881 cgtcgtcgtt gtgctttgac aggtcgccct cgtggtactt tccgtaaatt tggtttgggt
    26941 cgtattaaaa tccgtgaaat cgccatgcgt ggcgaaattc cgggtgttgt taaagccagc
    27001 tggtaatagg agtaattaag aatgagtatg catgatccta tttccgatat gttgactcgt
    27061 atccgcaatg cgcaacgtgc taataaagca gcagttgcaa tgccttcttc aaaattaaag
    27121 tgtgctattg caaaggtatt gaaagaagaa ggatatattg aggacttcgc agtttcatct
    27181 gacgtaaagt ctatattgga aattcaatta aaatactatg caggtcgtcc tgtaattgaa
    27241 caaatcaagc gtgtatctcg ccccggtttg cgtatttata aagcgtctag tgagattcca
    27301 agtgttatga atggcttggg tattgctatc gttagtactt ctaaaggtgt aatgactgat
    27361 cgtaaagcac gttctcaagg tgttggtggt gagttgttat gcattgtagc ctagtggagg
    27421 aaaagaaatg tcacgtgtcg caaaaaaccc agtgacggtt cccgctggtg tagaagtaaa
    27481 atttggaaca gaggcattgg ttattaaggg taagaacggt gaattgtctt ttcctttgca
    27541 ttctgatgta gccattgaat ttaatgatgg caaattgact tttgttgcga ataatagcag
    27601 taaacaagca aatgcaatgt ctggtactgc tcgcgcatta gtcagcaata tggttaaagg
    27661 tgtttcagaa ggttttgaga agaaattaca attgataggc gtgggttatc gtgctcaagc
    27721 acaaggtaaa atcttgaatc tgtctttggg tttttctcat ccgatcgtat atgaaatgcc
    27781 tgaaggtgtc tccgttcaaa ctcctagcca aacagagatt gttttaactg gctcggataa
    27841 acaagttgtt ggtcaagttg cttctgagat tcgtgcgttc cgtgctcctg agccttataa
    27901 aggtaaaggt gttcgctatg taggcgaagt agtggtaatg aaagaagcca agaaaaaata
    27961 attgaggttc actaatggat aaacatacaa cccgactccg tcgtgcacgc aaaacccgtg
    28021 ctcgtattgc ggacttgaaa atggtaagat tatgtgtgtt ccgaagcaat aatcatattt
    28081 atgctcaagt aattagtgct gaaggtgata aagtattggc tcaagcctct acattggaag
    28141 ctgaggtgcg cggtagtctg aaatctggaa gcaatgttga agcagctgca atagttggta
    28201 aacgtattgc tgagaaggct aaagcagcag gtgtagaaaa ggttgctttt gatcgttcag
    28261 gtttccaata tcacggtcgt gtgaaggctt tggctgaagc tgctcgtgaa aatggtttaa
    28321 gcttctaaat atttggagac tttcagatgg caaaacatga aattgaagaa cgcggtgacg
    28381 gtctgattga aaagatggtc gcagttaacc gtgtaaccaa agtagttaaa ggtggtcgca
    28441 ttatggcttt ctctgcgcta actgttgttg gtgatggaga tggtcgtatt ggtatgggta
    28501 aaggtaagtc aaaagaagtg cctgttgcag tccaaaaggc gatggatcaa gcacgacgct
    28561 ctatgattaa ggtaccatta aaaaatggta cgatccatca tgaggttatt ggtcgacatg
    28621 gtgctactaa agtatttatg cagcctgcta aagagggtag tggcgtaaaa gccggtggac
    28681 ctatgcgttt ggtttttgat gctatgggca ttcataatat ttccgccaaa gtgcacggat
    28741 ctactaaccc atataatatc gtacgtgcaa cattagatgg tttgtctaag ttgcatactc
    28801 ctgctgatat cgcagccaaa cgtggcttga cagtggaaga cattttggga gttaaccatg
    28861 gctgaacaaa aaaagattag ggttacattg gttaaaagcc tgattggtac aattgaatct
    28921 catcgtgcat gtgcacgcgg tttaggtttg cgtcgtcgcg agcatacggt agaggtttta
    28981 gatacctctg aaaaccgtgg tatgattaat aaaatcagct acttgttgaa agtggagtct
    29041 tgatatgttt ttgaatacaa ttcaacctgc tgttggtgct acgcatgctg gtcgtcgtgt
    29101 tggacgcggt attggtagtg gtcttggcaa aacgggtggt cgtggtcata aaggtcaaaa
    29161 gagccggtct ggtgggtttc ataaggtggg tttcgagggt ggtcaaatgc ccttgcaacg
    29221 acgcctccct aaaagaggtt ttaaatcttt aacagtatca gctaatgcac agcttcgttt
    29281 aagtgaactg gaatcaattg ctgttaatga gattgatatt ttagtcttaa agcaagcagg
    29341 tctgattgca tctacagtct ctaatgttaa agttattgct tctggtgaaa tttctaaggc
    29401 agttgctttg aagggtatta aagttaccaa aggtgcgaga gctgctatcg aggatgttgg
    29461 tggtaagatt gaaatgtaag gtttaatatt gtggctaatc aacaaacgtc atcaggttca
    29521 tccaagtttg gagatcttaa gaaacgtctt ttgtttctat ttggagcatt gattgttttt
    29581 cgaattggtg cccatatacc cgtacctggg gttgatgctg ttgctttagc taaattatac
    29641 gaaagcgctg gaaacggcat cctgggaata ttgaatatgt tttccggtgg gtcgttagag
    29701 cgctttagta tatttgcaat aggaattatg ccatatattt cagcttctat tattgtacag
    29761 ctcgcttctg aaattttgcc atcattgaag gctttaaaaa aagaagggga ggctggtaga
    29821 aaggtaatta cgaaatatac taggtatggt actgttttgt tagcaattct tcaaagtcta
    29881 ggtgttgcat ctttcgtatt tcagcaagga attgttgtaa caagttcatt tgagtttcat
    29941 gtttccacgg tagtttcttt ggtaacggga accatgtttc ttatgtggct tggggagcaa
    30001 attactgaaa ggggtatcgg gaacggtatt tctttaatca ttacggcagg tattgcttca
    30061 ggtattcctt cgggtattgc aaagctggtt acactgacga accaaggttc tatgagcatg
    30121 cttacggcgt tgcttattgt atttggtgcc ttattattaa tttatttggt tgtatacttt
    30181 gaaagtgcac agcggaagat tcctattcat tatgcaaaac gccagtttaa tggtagggtg
    30241 ggtagtcaaa atacgcatat gcctttcaag ttgaatatgg ctggtgttat tcccccaatt
    30301 tttgcttcca gtattattct atttccatct actcttttag gttggtttgg ttcggctgat
    30361 acaaatagtg ttttgcacaa aatagctgga ttgttacaac acggtcaatt gctgtatatg
    30421 gctttatttg cagcgacagt tattttcttt tgttattttt atacggcttt ggtttttagt
    30481 cctaaagaaa tggcagagaa tttaaaaaag agtggtgctt ttgttcctgg gattagacct
    30541 ggtgagcaga cctctaggta tttagaaaaa gttgtattac gtttgacatt gtttggagct
    30601 ctttatatta caactatttg tttaattcca gagttcttaa ctacggtttt aaatgtacct
    30661 ttttatttgg gtggcacgtc tttgttgatt ctagttgttg taacgatgga ttttagtaca
    30721 caaataaatt cgtataggct tactcaacag tatgataagt taatgactcg ttcagaaatg
    30781 aaatcatttt ctcggaaata gaattatggc gaaagaagat actatccaaa tgcaaggtga
    30841 aattcttgaa actttaccta acgcaacatt taaagtaaaa cttgagaatg accatattgt
    30901 attgggtcat atttctggga agatgcggat gcattacatt cgtatttctc cgggagataa
    30961 ggtcacagta gagctgacac cttatgattt aactagggct cgaatcgttt tcagagcaag
    31021 ataaaccaat aaaaggaaaa taaaatgcgt gtacaaccat ctgttaagaa aatttgccga
    31081 aattgcaaga ttattcgtcg aaatcgtgta gttcgtgtga tttgtactga tccccgtcac
    31141 aaacagcgtc aaggttaatg gaatatttct tttaatgtga ttctgtgata tagtgacaaa
    31201 atttgctcta aaaaggaaaa aacatggctc gtattgcagg ggtaaatatc cctaataacg
    31261 cacacatcgt aattggtctt caggctattt acggtattgg tgctactcgt gctaaattga
    31321 tttgtgaggc tgcaaatatt gcgcctgata ctaaagcaaa agatttggac gagactcaat
    31381 tagatgcttt gcgtgatcaa gttgccaagt atgaagtaga aggtgatttg cgtcgtgaag
    31441 taactatgag tatcaaacga ttgatggaca tgggctgcta tcgtggcttc cgtcatcgtc
    31501 gcggcttacc atgccgcggt caacgcactc gtacaaatgc gcgtactcgc aaaggtccgc
    31561 gtaaagcgat tgctggtaag aaataaattt taaggaattt tattaatggc taaagcaaac
    31621 acagcttcac gtgtacgtaa aaaagtacgt aaaaccgtga gtgagggtat tgtgcacgtt
    31681 catgcatctt tcaacaatac catcattaca atcactgacc gtcaaggcaa tgcgttgtct
    31741 tgggctacct ctggcggcgc tggttttaaa ggttctcgta aaagtacacc atttgcagca
    31801 caagttgcag cagaagcagc tggtaaagtt gcccaagagt atggcgttaa aaatttagag
    31861 gttcgtatta aaggtccagg tccaggtcgc gaatcctctg tacgtgcttt gaatgctctt
    31921 ggtttcaaga ttaccagcat tactgacgtt accccgttgc ctcataacgg ttgccgtccg
    31981 cctaaaaaac gtcgtattta atattggagt gatttgaaac atggcacgtt atattggccc
    32041 taaatgtaag ttggcacgtc gcgaaggtac ggatttgttt ttgaagagtg cgcgccgctc
    32101 tttggattct aaatgtaaaa ttgattccgc tcccggtcag catggtgcaa aaaaaccgcg
    32161 tttgtcagac tatggtttgc agttgcgtga aaaacaaaaa atccgccgta tttatggcgt
    32221 attagaacgt cagttccgtc gttatttcgc agaagctgat cgccgtaaag gttctactgg
    32281 cgagttgctg ttgcagttgc tggaatctcg tttggataat gtcgtttatc gtatgggttt
    32341 cggttctacc cgagctgaag caagacagct tgtttctcat aaggctatag ttgtaaatgg
    32401 acaagttgtc aatattcctt ctttccaagt gaaagctggt gatgttgtct cagttcgtga
    32461 aaaagccaaa aaacaggtac gtattcaaga agcattgggt ttggcaactc aaatcggctt
    32521 gccgggttgg gtttctgtag atgcagataa acttgagggt gtgttcaaaa acatgccgga
    32581 tcgctctgaa ttgaccggtg atattaatga acagctggtg gtagagttct actctaaata
    32641 atgctagctc agtgagggac agttaaatgc agaatagcac aaccgaattt ttgaaacctc
    32701 gtcaaattga tgtaaatact ttttctgcaa ctcgtgcaaa agtatctatg cagccatttg
    32761 aacgtggttt cggtcatacc ttaggtaatg ctttgcgccg tatcttactg tcatccatga
    32821 atggttttgc tcctactgaa gtagctattg ccggtgtatt gcacgaatat tctactgttg
    32881 gtggtgttca ggaagatgtt gttgacattt tgctgaatat taaaggtatt gtgtttaaac
    32941 tccatggtcg tagccaagtt caacttgtgt tgaagaaatc aggttcaggt gtcgtatctg
    33001 ccggtgatat tgagttgccg catgatgtag aaattctgaa tcctggtcat gtcatttgtc
    33061 atttggctga taacggtcaa attgaaatgg aaattaaagt agagcaaggt cgtggttatc
    33121 aatctgtttc aggtcgtcag gtagttcgtg atgagaaccg tcagattggt gcaatccagt
    33181 tggatgcgag cttttcgccc atcagccgtg ttagctttga ggttgaacct gcacgtgtag
    33241 agcagcggac ggatcttgat aaattggttt tggatatcga aaccgacggt tctattgatc
    33301 ctgaggaagc tgtacgcagt gcggcacgta ttttgattga tcagatgtct atttttgctg
    33361 atttgcaggg tactcctgtg gaggaggttg aagaaaaatc acctcctatc gaccctgttc
    33421 ttttgcatcc ggtggatgat ctggaattga cagtacgttc agctaattgt ttgaaagctg
    33481 aggatattta ttatattggc gatttgattc aacgcactga aaccgagctt cttaaaacgc
    33541 cgaatttggg acgtaaatct ttgaatgaga ttaaggaagt attggcatct aaaggtttga
    33601 cactgggttc taagttggaa gcatggccac ctgtaggctt ggaaaagcct taatgaagaa
    33661 ttaaaggata attgatatgc gtcatcgtaa tggcaatcgc aaattaaacc gtaccagcag
    33721 tcatcgtgct gcaatgctgc gtaatatggc gaattcatta ttgactcacg aaactattgt
    33781 aacaactctg cctaaggcca aggaattgcg ccgtgtagta gagccgttga ttacattggg
    33841 taaaaagccg tcattggcaa gccgccgttt ggcatttgac cgtactcgcg accgtgatgt
    33901 tgtagtaaaa ctgtttggcg atttgggtcc tcgttttact gctcgtaacg gtggttatgt
    33961 tcgagtgttg aaatacggat tccgtaaagg tgataatgca cctctggcac tggttgaatt
    34021 ggttgacaaa ccggctgctg agtaatttta gtcatataac gccatctgcc gaaaagcagg
    34081 tggcgttatt tttgcaatat ctgatagata atatggtatt ggctatcatg tttaaaatat
    34141 taattgaata gctaaggttt gcgcggtaaa cttacatcat taaaaaattc tatgatggtt
    34201 tatataatga atgccttcga tataaagtcg acaaagatgg acgtattgtc tatatctttg
    34261 catacatcag acttgtttga tttggaagat gtgctggtca aattgggcaa gaagtttcaa
    34321 gagtctggtg ttgttccatt tgttctggat gttcaagaat ttgattatcc cgagtctttg
    34381 gatcttgctg cattggtttc gttgttttca aggcatggta tgcaaatttt gggtctgaag
    34441 cattctaatg aacgttgggc tgctgtggct atgaagtatc atttgctgtt ttgtctgtct
    34501 cattcggaaa atgttaaaga actgggtcag gttgaggtgc agaaaacgga ggatggtcag
    34561 aaagcaagga aaacagtatt gattacatcc cctgtccgta ccggtcagca ggtttatgcc
    34621 gaagatggcg atttgattgt tacgggggcg gtcaaccagg gggcggaatt gattgcagat
    34681 ggcaatatgc atatttatgc gccgatgaga gggcgtgctt tggccggcgc caaaggtgat
    34741 acttctgccc gcatatttat ccactccatg caggcggagt tggtttctgt cgcggggatt
    34801 taccgtaatt ttgaacagga tttgccggac catctgcaca agcagccggt acagatattg
    34861 ttgcaggata accgattggt tatcagtgca attggctcag agtaattgtt tgatatttta
    34921 aaaaggaaat attgtggcaa aaattattgt agtaacttca ggcaagggcg gtgtcggtaa
    34981 aacgactacc agtgcaagta ttgcaacagg tttggcatta cgcggatata aaactgcggt
    35041 aattgatttt gatgtgggtt tgcgcaacct cgacctcatt atgggttgcg agcgtcgtgt
    35101 cgtttatgac ctgatcaatg tcattcaggg tgaggcgacg ctcaaccagg ctttgattaa
    35161 agataaaaat tgtgaaaacc tgtttatttt gccggcttcc cagactcggg ataaagacgc
    35221 tttgacacgc gagggcgtag aaaaagtgat gcaggagctg tccggcaaga aaatgggctt
    35281 tgagtatatt atttgcgact ctcctgctgg tattgagcag ggtgcattga tggcgttgta
    35341 ttttgctgat gaagccattg taacgaccaa tcctgaggtt tccagtgtgc gtgactccga
    35401 caggattttg ggaattttgc aaagcaaatc ccgtaaggcg gagcaaggcg gttcggttaa
    35461 agaacatctg ttaattacgc gttattctcc cgaacgtgtg gcaaaaggcg aaatgctgtc
    35521 tgtacaggat atttgcgata ttctgcgtat tcctttgctg ggtgtgattc ccgaatccca
    35581 aaacgtcttg caggcatcca attccggaga accggtcatc catcaggaca gcgtagcggc
    35641 ttccgaggca tataaggacg ttattgcccg tcttttgggc gagaaccgtg aaatgcgttt
    35701 cttggaagct gagaaaaaaa gcttcttcaa acgtctgttc ggaggataag gtatgtcatt
    35761 gatcgaactt ttattcggta gaaagcagaa aacggcaacc gttgcccgcg accgccttca
    35821 aatcatcatt gcccaagagc gcgcccaaga aggtcagact ccggattacc tgccgacttt
    35881 acgtaaagag ttgatggaag tcctgtccaa atatgtgaat gtttcattag acaatatccg
    35941 tatttcccaa gaaaagcagg atggtatgga tgtgcttgag ttgaacatta ctttgccgga
    36001 acagaaaaag gtataggaca tgaccttaac cgaattgcgg tacatcgtcg cagtcgccca
    36061 agaacgtcat ttcggccggg cggcgcggcg ttgttttgtc agccagccca ctttgtctat
    36121 tgccattaag aaattggaag aagagcttgc cgtctctttg tttgaccgga gcagcaacga
    36181 tattattacg accgaggcgg gggaacgtat cgttgcacag gcgcgtaagg tattgaaaga
    36241 ggcggagctt atcaggcatt tggcaaatga agaacaaaac gagctggagg gtgcgttcaa
    36301 actcgggctg atttttacgg ttgcgccata cctgctgccg aaactgattg tctctttgcg
    36361 ccgtactgca ccgaaaatgc ctttgatgtt ggaagagaat tacacgcata ctttgaccga
    36421 gtcgctcaaa cgcggggacg ttgacgcgat tatcgttgcc gaaccgtttc aagagccggg
    36481 cattgttacc gaacccttgt atgacgaacc gtttttcgtg attgtcccga aagggcattc
    36541 atttgaggaa ctggatgccg tttcgccccg gatgctgggt gaggagcagg ttttgctgct
    36601 gacggaaggc aactgtatgc gggatcaggt actctcaagc tgttccgaat tggcggcgaa
    36661 acagcgcata caggggctga ccaatacatt gcagggcagc tcgatcaata caatccgcca
    36721 tatggtcgcc agcggtttgg caatcagcgt gttgccggca accgcgctga ccgagaacga
    36781 tcatatgctg ttcagcatta ttccgtttga aggtacgccg ccaagccggc gggtcgtatt
    36841 ggcgtatcgc cgtaattttg tccgtccgaa ggcgttgtcg gcgatgaagg cggcgattat
    36901 gcagtcgcag cttcacgggg taagttttat ccacgactag gcgcagaaaa tgccgtctga
    36961 aacgggtttc agacggcatt tgttatcttt gccgtcaatc aggcaaacct atccgaccta
    37021 cagttgcttc gaatcgtcat tcccgcgcag gcgggaatct aggtctgtcg gtgcggaaac
    37081 ttatcggata aaacgcttgc tccaatctcg cgttccagat tcccactttc gtgggaatga
    37141 cgggatcagg tttccgtatg gatagattcg tcattcccgc gcaggcggga atctaggtct
    37201 gtcggtgcgg aaacttatca ggtaaaacgg tttctccggt cccgagtcct agattcccac
    37261 tttcgtggga atgacggcat attttgacat tgaataaaaa agactaaaaa cggaaaacag
    37321 aaaacagaaa acagaaaaca gaaaacagaa aacagaaaac agaaaacaga aaacagaaaa
    37381 cagaaaacag aaaacagaaa acagaaaaca gaaaacagaa aacagaaaac agaaaacaga
    37441 aaacagaaaa cagaaaacag aaaacagaaa acagaaaaaa gcctgtctga cgacaggctt
    37501 tttgttgata ccaatctttg cagattagaa tttgtggcgc agaacgacgg cgctggcagt
    37561 cgatacgatt ttgtctgcgc ctttgccttt ttgcaaccag ccggcagaaa ccaaggcaga
    37621 agtgcgtttg gagaagtcgt attccgcacc gacaaccact tggtcgtaag tattgtcgta
    37681 gtctgcacta tcaacagtgc ctttgaagcc gtgggcgtaa gaaacgcggg gcgttacgtt
    37741 gccgaaacgg tatgccacgc tagcggcaac ttcggtttga gagttgtgcg aattatcacg
    37801 cactaattga tcttgataca atttggcatc ttgttgttgt gcggctacgg aggcgtacag
    37861 ggcattattg tcgtaaccgc cgaccaaacg gtgaacttgc agtttttcaa caaacaaact
    37921 ggggatatta taattatatg aatatccttc cattttttta gtgccttcgc cgtatctttg
    37981 gaacaagccg gcgtattgtg cgaagaagcc gttgtttcgg tagttcaagc caacgtggta
    38041 agattcgccg tttgagcctg aattgtcttt aggtgcgtat tgtacgctgc cgctgaagcc
    38101 ggcaaattcg ggagaatcgt agcgtgcgga caggtagcgg tgttcccgtt cggccatttt
    38161 gctgatttcc agaaactcgc cggtatattt gccggattcc caagcattga ctttgctgcc
    38221 ggtgtttttc agggggctgt tcaggctgcc ggcgcggatg gtgccgaagc cgcccttcaa
    38281 gccgatgaag gattgtttgt tgccccagcc gctgttagtg ccggcgacgg aggcgccttg
    38341 ttccaactgc caaatggctt tcaggccgtt gccgaggtct tcttggcctt tgaagccgat
    38401 ttttgaaccg aagtcggaga tttcgctgcc ggttcccacg ccaactactt tgccttcccg
    38461 atgttctaca gaacggtaag tttgtacgcc ggctttgatg gcgccgtaca gggtgacatc
    38521 ggccattgcc gcaacaggaa gggctgccaa agtcagggca atcagggatt ttttcattgc
    38581 tgtattcctt ttttggttaa gaaatttaag caggccgggc tttccaagcc gcttagcttt
    38641 gcatttaccg ccgaggggct cggcggttac atgtctgaaa ctatagatgt tcctgtctga
    38701 aaaaacaaac ttctgcctgt ttttgtgtgg aatccgatgt gcattttgaa ggacggatag
    38761 agatattacg ggtatttttt gttttataac atatggttat ttaaaatttt taagatttgc
    38821 atttttacaa cacttactcg ggagggtatt ggagggcatt gcaaaccggg g
//
LOCUS       DAXGCP010000008        38485 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.008, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000008 DAXGCP010000000
VERSION     DAXGCP010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38485
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.008"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            189..1685
                     /locus_tag="ACFJCW_000363"
     CDS             189..1685
                     /locus_tag="ACFJCW_000363"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HFC4150609.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLATGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLTGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFVAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVDGQLDDWALKG
                     AVIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVVMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFAILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            1695..3140
                     /gene="nuoN"
                     /locus_tag="ACFJCW_000364"
     CDS             1695..3140
                     /gene="nuoN"
                     /locus_tag="ACFJCW_000364"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HFC4150610.1"
                     /translation="MNWSDLNLMPALPEVALLSLLVLLLPADLWASDDKCRWTHYGAL
                     ATVAVTAAVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALTFVLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMSVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWMPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHTGFILLAFMAGAVGFAAGLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLVGAFYYLRVVKVMYFDESGRARPAAGGNNAAKS
                     LLSVNALLLVLWGIMPQTVIDWCAKALENTL"
     gene            3252..3551
                     /locus_tag="ACFJCW_000365"
     CDS             3252..3551
                     /locus_tag="ACFJCW_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HFC4150611.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHLIELA
                     AGFALTASLAYILESRAGAVHNQGWEFYATVVCLYLIFAFPCFVRRYFWHTRNRE"
     gene            complement(3668..4564)
                     /locus_tag="ACFJCW_000366"
     CDS             complement(3668..4564)
                     /locus_tag="ACFJCW_000366"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC4150612.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSGNEIPHTLHEAMRYAA
                     LDGGKRLRPMLVLAASELGGAVADAVGQAMAAIEMIHVYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLTGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLERMHSLKTGALIRAAVLLGATACPDLSDAELAVLDAYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(4548..4772)
                     /locus_tag="ACFJCW_000367"
     CDS             complement(4548..4772)
                     /locus_tag="ACFJCW_000367"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HFC4150613.1"
                     /translation="MKKNTPKSFEEALSRLESLTQSMQGEMPLEDALAAYQEGNELVR
                     YCQTKLAQVEQKLQVLDADGTKELNLESDE"
     gene            complement(4885..5808)
                     /gene="rsgA"
                     /locus_tag="ACFJCW_000368"
     CDS             complement(4885..5808)
                     /gene="rsgA"
                     /locus_tag="ACFJCW_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HFC4150614.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITAGYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWLEKLKFYETLGYPVI
                     ETRVLENADSLRPVLQGHSNILLGQSGMGKSTLANALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPHYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAETGAASPERLAFLQGITDELLG"
     gene            complement(5813..7669)
                     /locus_tag="ACFJCW_000369"
     CDS             complement(5813..7669)
                     /locus_tag="ACFJCW_000369"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC4150615.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLCRFVWSSMDGVRKWIA
                     ALAALTAGIGIMEALIFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVVWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIIGFASVMRLLIPRLGQTAARQAN
                     ARSLMTGRITDAYSNIATVKLFFHGAREAVYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSAAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGI
                     VNDGMATLSKPHTILDKPQALPLNVPQGAIKFEHVDFCYEAGKPLLNGFNLNIKPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRSGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMEGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLSEHVEWQHD"
     gene            complement(7696..7833)
                     /locus_tag="ACFJCW_000370"
     CDS             complement(7696..7833)
                     /locus_tag="ACFJCW_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150616.1"
                     /translation="MPSEGGAAFALTKPCVSAPRCLPDGFSRKMALLSLLSDGIVFDA
                     V"
     gene            complement(7833..8417)
                     /gene="ruvA"
                     /locus_tag="ACFJCW_000371"
     CDS             complement(7833..8417)
                     /gene="ruvA"
                     /locus_tag="ACFJCW_000371"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HFC4150617.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAASPAADETEDIVSTLLA
                     LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK"
     gene            complement(8499..8825)
                     /locus_tag="ACFJCW_000372"
     CDS             complement(8499..8825)
                     /locus_tag="ACFJCW_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC4150618.1"
                     /translation="MNIKHLLLTAAATALLGISAPALAHHDGHGDDDHGHAAHQHGKQ
                     DKIISRAQAEKAAWARVGGKITDIDLEHDDGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(8886..9572)
                     /locus_tag="ACFJCW_000373"
     CDS             complement(8886..9572)
                     /locus_tag="ACFJCW_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HFC4150619.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AEFTQTGNASWYGGRFHGRKTSGGDRYDMNAFTAAHKTLPIPSHVRVTNTKNGKSVIV
                     RVNDRGPFHGNRIIDVSKAAAQKLGFVSQGTAHVKIEQIVPGQSAPVAENKDIFIDLK
                     SFGTEHEAQAYLNQAAQNFAASSSSPNLSVEKRRYEYVVKMGPFASQERAAEAEAQAR
                     GMVRAVLTSG"
     gene            complement(9700..10164)
                     /gene="trmL"
                     /locus_tag="ACFJCW_000374"
     CDS             complement(9700..10164)
                     /gene="trmL"
                     /locus_tag="ACFJCW_000374"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HFC4150620.1"
                     /translation="MLTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKSLAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMRPGSRSMNLSNTVSVILFEAWRQHGYAGGV"
     gene            complement(10229..10954)
                     /locus_tag="ACFJCW_000375"
     CDS             complement(10229..10954)
                     /locus_tag="ACFJCW_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HFC4150621.1"
                     /translation="MNFLSCWRRIADAPTIRRCVLCHGSSGVSDGICAGCNTDLAAYR
                     TDAANSCPLCFRHVQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIRALKHLADLGM
                     AQPLADLTMQNPPDRLSDECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGGERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            10953..11702
                     /gene="bioH"
                     /locus_tag="ACFJCW_000376"
     CDS             10953..11702
                     /gene="bioH"
                     /locus_tag="ACFJCW_000376"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HFC4150622.1"
                     /translation="MPDAAKKVYLIHGWGANRHAFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADGIAAQIDTSADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTAAEDYPEGLAAPALGKMVGAFRTDYAKHIKQFLQLQLLHTPDAAEIIGRILPDLAR
                     CGTPQALQEALDAAERADARHLLDKIDVPVLLVFGGKDAITPPRMGEYLHRHLKGSRL
                     VVMEKAAHAPFLSHAEVFAALCRDFVEGGLT"
     gene            11699..12487
                     /locus_tag="ACFJCW_000377"
     CDS             11699..12487
                     /locus_tag="ACFJCW_000377"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC4150623.1"
                     /translation="MNPQDKCWQVHRHLAEHTDQRLTLVRNAPGHILLAGADADISRS
                     LLAKRYPPAVFEEYDSRADFLAAAAAARKGGFWQKLTGRGVVQHCQSPTVPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALKTDGLLFFTCFGRDTLAELKSRLKENGIESRSV
                     MFPDMHDLADMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAVAWDDENAA
                     RSCVGAIFEREGGLGITLETVYGHAVKKLVLPQGENVVRFFPKR"
     gene            complement(12568..12675)
                     /locus_tag="ACFJCW_000378"
                     /pseudo
     CDS             complement(12568..12675)
                     /locus_tag="ACFJCW_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            12797..14170
                     /locus_tag="ACFJCW_000379"
     CDS             12797..14170
                     /locus_tag="ACFJCW_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HFC4150624.1"
                     /translation="MDWRGNKPLGAAELADLKPLYKDFMYWERGLHMYKASAVVPTGY
                     VRVGNTAPLCGEDTQRYASFWGDGYDVYRQLRWRQIPEKQRKAFKKAAKSKNTVMFAG
                     REYGISKQNLSDVWDDFEDAMELKAFPCLSSLFLTKWHKNLYEYLEEYPFITRLCLEN
                     HGQTVLDFSNTRITDLSVDMTGVESLYLNEGLDSLNLKGEIKENCKVCTAGKGAGLIL
                     EVGKSVPKVRGLENLTAVNVMGIADFDMQNLSETYPKLKTIRLWGKPGNIANFSAVSG
                     FEDLEVFTAVDLFGFGADDIPHPDRLPKLHRLWMSSLPEEAAKAVKKLYKKRKEDGLD
                     LWIEKARKPEWLAQNFDNPFRDWDGAEHIPKSHAKKAAELYRKTRAGVVKLLGNPPEN
                     TGEGLAEAVKAYTGGFNKMDKKHFIDTVEREDIAEALETILDLIPDGSCADKEKLFEI
                     FDKNRNF"
     gene            complement(14207..16510)
                     /gene="recQ"
                     /locus_tag="ACFJCW_000380"
     CDS             complement(14207..16510)
                     /gene="recQ"
                     /locus_tag="ACFJCW_000380"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HFC4150625.1"
                     /translation="MTHRPTARQILHEVFGYPEFRGRQEDVINTLAGGGSLTVLMPTG
                     GGKSLCYQIPALMREGVAVVVSPLIALMNDQVASLHVAGIEAAAVNSGTSADEAREIA
                     DKLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSRWGHDFRPEYQQLG
                     MLAERYPNIPRIALTATADAATRADIKHYLHLDDASEFVSSFDRTNIYYQVIEKNNGK
                     KQLLDFIRKEMTGQSGIVYCLSRKKVEDAAQFLRENGLNAIPYHAGLSMDVREENQRR
                     FTHEDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLC
                     YGLNDWVLLRERIAEGNSGEVQKQIEIQKLDAMLSVCETAACRRVLLLKHFGEASEPC
                     GHCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQL
                     STFGIGAELSDKEWRSVIRQCISLGYLTVNIARYQALQLTEAAKKVLKGETEVMLRPL
                     KRDKPATRTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKM
                     PQNLNGLHDIYGLGEAKTERFGHGILKVCQNAADFSHDAVIRPQTEREQQLRQKLEAW
                     RYEQARAENCALHTVLSDESLADMLAATPETETDLEAVHGLGSVRAAKYGRDILAVCR
                     PFSDGIDETAKHKRCLMRALIQWCNETAKHEQSEPYRILSKAALRAIAAKQPEGLAEL
                     AAVYGVGEEKAARYGAAVLAVLERDAV"
     gene            complement(16573..17355)
                     /gene="trpC"
                     /locus_tag="ACFJCW_000381"
     CDS             complement(16573..17355)
                     /gene="trpC"
                     /locus_tag="ACFJCW_000381"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HFC4150626.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVLLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQGQLERFEALA
                     HELGMTVLLELHDETELEKCRNLTTPLRGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMRARGVHTFLIGETFMRADDIGAEVGKLF"
     gene            complement(17406..18365)
                     /locus_tag="ACFJCW_000382"
     CDS             complement(17406..18365)
                     /locus_tag="ACFJCW_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HFC4150627.1"
                     /translation="MILTPPDTPFFLRNGNADTIAAKFLQHPAPAYRREMLPDSTGKT
                     KTAYDFSAGGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRNRGWHGAVVHFRSCGGV
                     ANTAPVFYHLGDTAEIAFALDTLTARYREIYAVGVSLGGNAPAKYLGEQGKKALPHAS
                     AAVSAPVDAEAAGSRFDSGITRLLYTRYFLRTLIPKARSLQGFQTAFAAGCKTLGEFD
                     DRFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAANDPFLPPEALPRADEASEA
                     VTLFQPAHGGHAGFVSSTGGRLHLQWLPQTVLSYFDSFRTNRR"
     gene            complement(18498..20036)
                     /gene="murJ"
                     /locus_tag="ACFJCW_000383"
     CDS             complement(18498..20036)
                     /gene="murJ"
                     /locus_tag="ACFJCW_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HFC4150628.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEATEAFIRHVAGMLSFVLIVVTALG
                     ILAAPWVIYVSAPGFTKDADKFQLSISLLRITFPYILLISLSSFVGSILNSYHKFGIP
                     AFTPTFLNISFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQISLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAAGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLASGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHAGLSLAIGLGACINAGLLFFLLRKHGIYRPGRGWAAFLAKMLL
                     ALAVMCGGLWAAQACLPFEWAHAGGMRKAGQLCILIAVGGGLYFASLAALGFRPRHFK
                     RVES"
     gene            20474..21178
                     /locus_tag="ACFJCW_000384"
     CDS             20474..21178
                     /locus_tag="ACFJCW_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC4150629.1"
                     /translation="MKSRHLALALGVAALFALAACDSKVQTSVPADSAPAASAAAAPA
                     GLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCARLEPVLSKHAKSFKDDMYLRT
                     EHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQ
                     TAFDGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNT
                     IDLLADKVREEQKAAQ"
     gene            complement(21235..22239)
                     /gene="amgK"
                     /locus_tag="ACFJCW_000385"
     CDS             complement(21235..22239)
                     /gene="amgK"
                     /locus_tag="ACFJCW_000385"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HFC4150630.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLSFAAADADFRRYFRAAFSDGGS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDLGNTTFLTAMLQE
                     QGEAAHKALLLEAIGELVGLQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTADTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPAEFDEFYRRFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            22309..24714
                     /locus_tag="ACFJCW_000386"
     CDS             22309..24714
                     /locus_tag="ACFJCW_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HFC4150631.1"
                     /translation="MARLFSLKPLVLALGFCFGTHCAADTVAAEEADGRVAEGGAQGA
                     SESAQASDLTLGSTCLFCSNESGSPERTEAAVQGSGEASVPEDYTRIVADRMEGQSQV
                     KVRAEGSVIIERDGAVLNTDWADYDQSGDTVTVGDRFALQQDGTLIRGETLTYNLDQQ
                     TGEAHNVRMETEQGGRRLQSVSRTAEMLGEGRYKLTETQFNTCSAGDAGWYVKAASVE
                     ADRGKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSVSAGSDGVSLSVPY
                     YFNLAPNFDATFAPGIIGERGATFDGQIRYLRPDYSGQTDLTWLPHDKKSGRNNRYQA
                     KWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGGEEIAGNVNLNRRVWLDYGGRAAGGS
                     LNAGLSVQKYQTLANQSGYKDEPYAIMPRLSADWHKNAGRAQIGVSAQFTRFSHDGRQ
                     DGSRLVVYPGIKWDFSNSWGYVRPKLGLHATYYSLDSFGGKASRSVGRVLPVVNIDGG
                     TTFERNTRLFGGGVVQTIEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYYG
                     NDRINAANSLSTAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKNPRSRSD
                     WVAFASGGIGGRFTLDSSIHYNQNDKRAEHYAVGAGYRPAPGKVLNARYKYGRNEKIY
                     LQADGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEMLAGAEYKSSCGCW
                     GAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPAGRMDVAVPGYIPAHSLSAGRN
                     KRP"
     gene            24816..25817
                     /locus_tag="ACFJCW_000387"
     CDS             24816..25817
                     /locus_tag="ACFJCW_000387"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC4150632.1"
                     /translation="MMKIKALMIAAALLAAADVHAAPQKAKTAPAKAVKAAATAQKEA
                     APAQQQGGIRFSDGIAAVADNEVITNRRLAEAVAEAKATLPEDAQISESELSRQVLMQ
                     LVNQSLIVQAGKRRNIQASEAEIDAVVAQNPALKNLSPTQRRELADNIIAEKVRQQAV
                     MQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQHILIKADSENAAVGAESTIRK
                     IYDQARNGTDFAGLARRYSQDASAGNGGDLGWFADGVMVPAFEEAVHALKPGQVGAPV
                     RTQFGWHIIKLNEVRDAGTPEERIRNSVRQYIFQQKAGQATVNLLRDLHSGAYVDIR"
     gene            complement(26297..28177)
                     /locus_tag="ACFJCW_000388"
     CDS             complement(26297..28177)
                     /locus_tag="ACFJCW_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNB domain-containing ribonuclease"
                     /protein_id="HFC4150633.1"
                     /translation="MNIFYEESGQFKVAVVVQKNDATYQVDTQHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEGEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPVYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLRTILHAPDKQSLTYKAFTKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLSLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVRQGGGMEQIIMQRLSTVYFPGGKITMLPENWITAFSLDAGAYRPAVSIYFDVDGE
                     FNVGEPTCKIEAVNIAANLRIQAIEPHFNAETGLDQAGEMMFAHHQDLIWFYQFATAL
                     QKARGKYEPDRAPQYDYSIELDEEGNVSVVRRERGSPIDTLVSEMMILANSTWAQMLD
                     ENGLPGLFRVQPAGKVRMSTQSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQKSDAALFAALRDFDTAYAAYADFQRQMEAYWSLVYLQQQGISELTATILKE
                     DLVRIEGLPLTTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAAAPGGKTAGN
                     AV"
     gene            28333..28965
                     /locus_tag="ACFJCW_000389"
     CDS             28333..28965
                     /locus_tag="ACFJCW_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HFC4150634.1"
                     /translation="MENVNRVPEQARYDAERRQADEALADVFPAVSIFGSARTPQNHT
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIALPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPVVLVG
                     KAFWSGLAEWINAQLLARGMISEGAASLFSISDDEDEIIAYLSEHGLQTA"
     gene            29037..30407
                     /gene="purB"
                     /locus_tag="ACFJCW_000390"
     CDS             29037..30407
                     /gene="purB"
                     /locus_tag="ACFJCW_000390"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HFC4150635.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPEIAEVPPFSAETLAEIDKVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQQARETVILPKLAEIIGKLTDMAHEL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKILQAQEFLGKINGAVGNYNAHMA
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFSRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLAEKLPVSRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDVTWELLAEPIQTV
                     MRRYGVANPYEKLKDLTHGKDGITPEVLKLFIESLEIPAEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            30487..32355
                     /locus_tag="ACFJCW_000391"
     CDS             30487..32355
                     /locus_tag="ACFJCW_000391"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC4150636.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITNIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVELSAVFLSNIYLGFQQGYFDLSANENPVLHIWSLAVEEQYYLLYPLLLIFCYKK
                     TKSLRVLRNISIILFLILTATSFLPSRFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTENGKRQLLSLLCFGALLVCLFVIDKHDPFIPGITLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLMLVGYNLYSRGILKQEHLRPLPG
                     APLAAENNFPETVLTLGDSHAGHLRGFLDYVGGREGWKAKILSLDPECLVWVDAKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAINQYLRPIRAMGDIGKSNQAVFDLVKDIPNV
                     HWVDAQKYLPKNTVEIHGRYLYGDQDHLTYFGSYYMGREFHKHERLLKHSRGGALQ"
     gene            complement(32491..33105)
                     /locus_tag="ACFJCW_000392"
     CDS             complement(32491..33105)
                     /locus_tag="ACFJCW_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HFC4150637.1"
                     /translation="MNFTRLLNQVLSTVQKKGSTFSGSPLNSFGGGALVAGVASMLLN
                     GKNRKTITKIGSTAALGYLAYRGYQMWQQNKGRATVTQSDFQPAGKTEETYSRTVLRT
                     MIAAAASDGMIDEAERRTIEQESGTDPETAAWLAAEYRLPASIGDIAAAVGNDEALAA
                     EAYLAARLVCADLSRKETVFLARLSQALKLDDNLVESLERQLGI"
     gene            complement(33141..35291)
                     /gene="dinG"
                     /locus_tag="ACFJCW_000393"
     CDS             complement(33141..35291)
                     /gene="dinG"
                     /locus_tag="ACFJCW_000393"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HFC4150638.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LTREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELTFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDAWPEKIDDAIWLKVTNDRHGCLKAACPNRP
                     ECPFYLARDMLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGLSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALIDRLTGEFGLFIARIEQISAVWDLLSTVSIEGEEPLAKWIARRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGSFNLILRQTGLLWLPETTT
                     LALKSPFDFEKQGELYIPSIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALHLPGDYLPLLLVQGELPKAVLLQKHHQAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            complement(35473..36771)
                     /locus_tag="ACFJCW_000394"
     CDS             complement(35473..36771)
                     /locus_tag="ACFJCW_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HFC4150639.1"
                     /translation="MPSETALPLYADTRAAHTLVWFRQNLRIRDNAALCAAVAEGSPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLARRGIPLYTAASPAGLVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRSVFGKTDLTPGNGTAHTDFNRYRE
                     VWLDRFSKQPPAGSDLFAAYRQPFPENLPAPPPAALSDGIFLPQNGGETAAWRQWRRF
                     LEQAASYSVLKDFPSRKNTSLMGAYLSVGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHADDDPSDGNPEHTLRLTLWQQGRTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWRLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPARPVAGV"
     gene            complement(36761..37672)
                     /locus_tag="ACFJCW_000395"
     CDS             complement(36761..37672)
                     /locus_tag="ACFJCW_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC4150640.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHHNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVALELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGPLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            37780..38178
                     /locus_tag="ACFJCW_000396"
     CDS             37780..38178
                     /locus_tag="ACFJCW_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC4150641.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSS
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            38227..38415
                     /locus_tag="ACFJCW_000397"
                     /pseudo
     CDS             38227..38415
                     /locus_tag="ACFJCW_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
BASE COUNT         7982 a        10342 c        11384 g         8777 t
ORIGIN      
        1 ataaaagatt tggctgaatt agatgtttta gtacaggcag aatatcgcaa tcgtacagat
       61 attgattggg aataagtaaa gaagggggga gagtattcat tccttctttc agacgacttc
      121 ctaaaacgct gtctgtaaag accaacccat acaactatat tttttatttt aaccacaggt
      181 taaccactat gttttccaac tacctactca gcttggcaat atggataccc atcgccgcag
      241 gcgtgctggt tttggcgacc ggtaaagaca gccgtgcgcc gctggcgcgt gtgcttgcct
      301 tcatgggagc gcttgccggt ttcttggtaa cgttgcccct gtttaccggt ttcgaccgtt
      361 tgagcggcgg ctatcaattt accgagttcc acgagtggat tccgcttctg aaaatcaact
      421 atgcattggg cgtggacggt atttcagtgc tctttatcat cttgaatgcg tttattacgc
      481 tgctggtggt attggccggt tgggaagtca ttcagaaacg tccggcgcag tatatggcgg
      541 cattcctgat gatgtcgggt ttgattaacg gcgcgtttgc cgcgcaggat gcgattctgt
      601 tttatgtgtt cttcgagggt atgctgattc cgctgtacct gattatcggt gtatggggcg
      661 gtccgcgccg cgtctatgcg tcggtcaagc tgttcctcta tacgctgacg ggttcgctct
      721 tgatgttggt tgccatggtt tacctgtact atcagacagg cagcttctct attgtcgatt
      781 tccaaaacat caaacagatt ccgttgggcg tacaacagct tttgtttgta gcgttcttcc
      841 tgtcatttgc cgtaaaagtg ccgatgttcc ccgtacacac ttggctgccg gatgcccacg
      901 ttgaagcgcc gaccggcggt tcgatggtgt tggcggcaat tacgctgaaa ctgggtgcgt
      961 atggtttctt gcgctttatc ctgccgatta tgccggacgc ggctcgctat tttgcccccg
     1021 tgatcatcgt attgagcctg attgccgtaa tttatatcgg tatggtggcc ctggtgcaaa
     1081 ccgatatgaa gaaactggtg gcgtattcgt ccatcagcca tatgggtttt gtaacgcttg
     1141 ggatgttttt gtttgttgac gggcagttgg acgactgggc gttgaaaggc gcggtcattc
     1201 agatgatttc gcacggcttc gtgtcggcgg cgatgtttat gtgcatcggt gtgatgtacg
     1261 accgcctgca cacgcgcaat attgccgatt acggcggcgt ggtcaatgtg atgcccaagt
     1321 ttgcggcgtt tatgatgttg ttcggtatgg cgaacgccgg cctgcctgcg acttccggct
     1381 tcgtgggcga gtttatggtg gttatgggcg cggtcaaagt gaatttctgg gtgggcgcgc
     1441 tggcggctat gacgttgatt tacggcgcgt cttataccct gtggatgtac aagcgcgtga
     1501 ttttcggcgc gattcacaat ccgcacgttg ccgaaatgaa agacatcaat tgccgcgagt
     1561 ttgcgattct ggcggttttg gcggttgctg ttttggggat gggcctgtat ccgaacgcat
     1621 ttatcgaagt ggtgcatcag gcggcaaacg atttgattgc ccatgtggcg caaagcaaga
     1681 tttgaggtgt gtaaatgaat tggtcagatt tgaatttaat gcccgcactg cccgaagtcg
     1741 cgctgctgtc gctgctggtg ttattgttgc cggcggactt gtgggccagt gatgacaaat
     1801 gccgttggac gcattacggc gcgttggcaa cggtggcggt tacggcggcg gtgcagcttg
     1861 ccgtgtggga acagggcagc acgtcttcgt tcaacgggat gtatattgcg gacggtatgt
     1921 cgcgtttggc aaaaatggtt ttatatgcct tgacgtttgt cctgtttgtc tatgccaagc
     1981 cctacaacca agtgcgcggt attttcaaag gcgagtttta caccctgtcg ctgtttgccc
     2041 tcttgggcat gagcgtgatg gtgagcgcgg ggcatttttt aactgcctat atcggtttgg
     2101 aactcttgtc gctcgccctt tacgccctga ttgccctgcg ccgcgattcc ggttttgccg
     2161 ccgaagccgc cttgaaatat tttgttctgg gcgcgctggc atccggcctg ctgctctacg
     2221 gtatttctat ggtttacggc gcaaccggtt cgctggaatt tgccggcgtg ctcgcctctt
     2281 ccttcaatga agaagctaac gaatggctgt tgaaactggg tctggtgttt atcgtcgtcg
     2341 ccgttgcgtt caaactcggc gcggtaccgt tccatatgtg gatgcccgac gtgtatcacg
     2401 gcgcgcccac ttctgttacc gccttggtcg gcactgcccc gaaaatcgcc gccgtcgttt
     2461 tcgctttccg catcctcgtt accgggctgg gaaccgtgca tcatgactgg tctctgatgt
     2521 ttgccctgct tgccgccgcc tcgctgctgg tcggcaacct tgccgccatc atgcagacca
     2581 atatcaaacg tatgctcgcc tattccaccg tatcgcatac gggtttcatc ctgttggcgt
     2641 ttatggcggg cgcggtcggc tttgcggcgg gcctctatta cgccattacc tacgcgctga
     2701 tggcggcggc agggttcggc gtgttgatgg tgttgtcgga cggggacaac gagtgcgaaa
     2761 acatcagcga tttggcaggg ttgaaccaac accgcgtatg gcttgccttt ttgatgctgc
     2821 tggttatgtt ctctatggcg ggcattccgc cgctgatggg tttttacgcc aaattcggcg
     2881 ttattatggc gcttttgaaa caaggctatg tatggttgtc ggtgtttgcc gtcgtgatgt
     2941 cgctggttgg cgcgttctac tacctgcgcg tggtcaaagt catgtatttt gacgaatccg
     3001 gccgcgcccg tcccgccgcc ggcggcaaca atgccgcaaa atccctctta agcgtcaacg
     3061 cgctgctgtt ggtgctgtgg ggcattatgc cgcaaaccgt tatcgactgg tgcgccaagg
     3121 cgttggagaa cacgctgtga gccgccgcaa cggcagccgt gtcagaggct gccgtttttg
     3181 ttaagatatg ccgttccgca atgcagttca gacggcatcg ccgccgacaa tgcccaaaca
     3241 gaaagcccat catgaccgca tccatgtaca tccttttggt cttggcactc atctttgcca
     3301 acgccccctt cctcacgacc agactgttcg gcgtggccgc gctcaagcgc aaacatttcg
     3361 gacaccacct gatcgagctg gcggcaggtt tcgcgctgac cgcctctctt gcctacatcc
     3421 tcgaatcccg tgcgggagcg gtacacaatc agggttggga gttttacgcc accgtcgtct
     3481 gcctgtacct cattttcgcc ttcccgtgtt tcgtgcggcg gtatttttgg cacacgcgca
     3541 acagggaata aacaagcaaa caagcatagg aatgccgtct gaaacccttt caggcggcat
     3601 ttgtttcatt caagtgcagg ccggcatcgc tgtgccggca cgtttcagtc ggcgatatac
     3661 gccggtttta atatttgcgt gcgactgcaa attctgccaa ctgccgcagg cgcagggctt
     3721 tgtcgccgaa gggttcgagc agcgcgactg cttcggcaac cagtttgtgt gcgtatgagc
     3781 gcgccgcttc caagcccatc agtttcacat aagtcggctt gtcgttgtcg gcatctttgc
     3841 ccgccgtctt gcccaaagtc gccgtgtccg cttcacaatc caacacatcg tcgatgactt
     3901 ggaacgccaa acccagtttt gccgcgtaag cgtccaatac ggcaagttcc gcgtcggaca
     3961 gatcgggaca cgccgtcgcc cccaataaaa ccgccgcacg gatcaacgcc cccgttttca
     4021 ggctgtgcat ccgttccaaa tcggcttgaa ccatttgttt gccgacattt gccaaatcga
     4081 ttgcctgtcc gcccgccata cccgcgctgc cgcccgcttt tgccaacacc gacaacattg
     4141 ccaactggcg tgcggcgggc agttctgtcg gacggctcaa cacgtcgaag gcttgggttt
     4201 gtaaagcgtc gccggtcaga agggcggtgg cttcgccata tttgatgtgg caggtcggtt
     4261 tgccgcgccg caggctgtcg ttgtccatcg ccggcatatc gtcgtgaacc aaagaataga
     4321 cgtggatcat ttcgattgcc gccattgcct gtccgaccgc atccgccacg gccccgccca
     4381 attccgaagc cgccagcacc agcatcgggc gcagacgctt gccgccgtcc aaagccgcat
     4441 agcgcatcgc ttcgtgcagc gtgtgcggga tttcgtttcc agacggcaaa aagcgttcca
     4501 gcagcagctc tgtctgcgcc tgcgccctct gttgccacgc tttcaaatca ttcgtcggat
     4561 tcaaggttca actccttcgt cccgtccgca tccaaaacct gtaatttctg ttcgacttgg
     4621 gccagcttgg tttggcagta cctgaccagc tcgttgcctt cctgataggc ggcaagcgcg
     4681 tcttccaagg gcatttcgcc ctgcatggac tgcgtcagcg attcaaggcg cgacaaggcc
     4741 tcttcaaacg atttcggggt gtttttcttc atagtttcgg gtgttccggt aaaaagcgga
     4801 ttgtagcatt tttgcaaaac ggatgccgtc tgaaacccga atccggcttc agacggcatt
     4861 ttttccgccc cggtcggcaa ggcgttaccc gagcagttcg tcggtgatgc cctgcaaaaa
     4921 ggcgaggcgt tcggggcttg ccgccccggt ttcggcggcg gctttgaagg cgcagccggg
     4981 ttcggcgcgg tgggtgcagt tgtggaagcg gcattgcccg acaaggtggc ggaaatcggg
     5041 gaaatagtgc ggcaaatcgg cggcttggag gtggtgtaaa ccaaattctt gcaaacccgg
     5101 ggagtcgatg agttgggttt cgccgttcaa atcataaagc cgggcgtggg tggtggtgtg
     5161 ttttcccgag tcgagtgcgg cggaaatgtc gccggtgcgg gcggtttggc tgcctaaaag
     5221 ggcgttggcc agggtggatt tgcccatacc gctttgtccg agcaggatgt tgctgtgccc
     5281 ttgcaggacg gggcgcaggc tgtcggcgtt ttccagcacg cgggtttcga tgacggggta
     5341 acccagcgtt tcgtagaatt tgagtttttc gagccagagg gcggtttcgg gcaggtcggc
     5401 tttgttcagg acgatgacgg cgcggatgcc ggcggcttcg gcggcaagca gggcgcgctg
     5461 tagcagccgc acgctcggac tcgggacggc ggcggttacg atgaggagtt gggtaacgtt
     5521 ggcggcgatg agtttggttt tccacgcgtc ttggcggtag agcaggcttt ggcgcggtaa
     5581 aaaatcttca atcacaactt gttcggcgtt gacggggctg atgcggacgc ggtcgccgca
     5641 ggcgaaatcg acgcgttttt tgcgggtgct ggcttcgtag gttgtgccgt cgggcgtgcg
     5701 gacgatgtag cggcggccgt agccggcggt aatttgggcg gtgtcgttca tggtttcttt
     5761 ggggttgggt gtggaaatgc cgtctgaaaa ggggtgttcg gacggcatcg gttcagtcgt
     5821 gctgccactc gacgtgttcg ctgaggaagc cgccgctctg gtgcgcccag agtttggcgt
     5881 aaagcccgcg tttttcgagg agttcggcgt gtgtgccttc ttcgatgatg cggcctttgt
     5941 cgaggacgac gagcctgtcc atcgcggcaa tggtggagag gcggtgggcg atggcgatga
     6001 cggttttgcc ttccatcatt ttgtcgaggc tttcttggat ggcggcttca acttcggaat
     6061 cgagcgcgct ggtggcttcg tcaagcagca ggatgggtgc gtctttgagc atcacgcggg
     6121 cgatggcgat gcgctggcgt tgtccgccgg agagtttcac gccgcgttcg ccgacgtgcg
     6181 cgtcgtagcc gctccgccct ttggcatcgg aaaggtcggg gatgaagccg gcggcttcgg
     6241 cgcgttcggc ggcggaaacc atttcggcat cggtcgcgtc ggggcggccg taaataatgt
     6301 tgtcgcgcac ggaacggtgc agcagcgagg tatcttgtgt gaccaaaccg atttgggcgc
     6361 gtaaagattc ttgggtaacg ccgcttatgt cctgcccgtc gatcgaaacc gtgccgcttt
     6421 gcggttcgta gaaacgcaaa agcaggttga cgatggtgga tttgcccgcg ccgctgcgtc
     6481 cgatcaagcc gactttttcg ccgggtttga tattcaggtt aaagccgttg agcagcggtt
     6541 tgccggcttc gtagcaaaaa tcgacgtgtt cgaacttgat tgcgccttgc ggcacgttca
     6601 gcggcagggc ttggggcttg tcgaggatgg tgtgcggttt ggacagggtc gccatgccgt
     6661 cgttgacgat gccgatgttt tcaaacagcc gcgcggattc ccacataatg tattgcgaca
     6721 gcccgttgac gcgcaacgcc atcgcggtgg cggtggcgac cgcacccacg ccgacctgtc
     6781 cgttgtgcca aagccagatg cccagtgcgg cggcggagag ggtcagcgaa gtgttgacga
     6841 tgaagctgca cgaatgcagc agagtcgcca gccgcatttg ggcgcgcacc gtaaccataa
     6901 attcttccat cgactgcttg gcatagacgg cttcgcgcgc gccgtggaaa aagagtttga
     6961 cggtggcgat attggaatag gcatcggtaa tgcggccggt catcagcgag cgggcattcg
     7021 cctgccgtgc ggcggtttgc cccaatctgg gaatcagcag gcgcattacc gaagcgaaac
     7081 cgattatcca gccgataaag ggcagcagca gccatgagtc gagcgaggcg agaatcacgc
     7141 ccgaagtgat gaaatacacc gacacataaa cgaccatatc ggcaaccgtc atcaccgcgt
     7201 cgcgcaacgc cagcgcggtc tgcatgactt tggcggacac gcggccggca aattcgtcct
     7261 gataaaaacc gaggctctgg ttcagcatca ggcggtggaa gttccagcgc aggcgcatag
     7321 ggaacacgcc ctgaagggtc tgcaggcgca cgttggacgc ggcaaacgcc cacacgaccg
     7381 aaaacaccat catcgccgcc attgccgcca gttcccaacc tttttcggca aacagttcgg
     7441 cgggcgcgta tttgccgagc cactctacga ttttgcccat aaattgaaaa atcagggctt
     7501 ccataatgcc gatgccggcg gtcagcgcag ctagggcggc tatccatttc cgcaccccgt
     7561 ccatactgct ccagacaaac cggcacaagc ctttttcggg cgttttcggc gcggcttcgg
     7621 ggtaggggtc gattcgggac tcgaaccagg aaaatatttt gttcaacatt gttttcgatt
     7681 tcggtaaaca cagtttcaga cggcatcaaa cacaatgccg tccgaaagga gggacaataa
     7741 cgccatttta cgggaaaagc cgtcgggaag acagcgcggg gcggaaacgc agggtttcgt
     7801 cagggcaaac gccgcgccgc cttcggacgg cattatttca gcaggttttt cagggcaagg
     7861 cgcacgcctt cgcccacgtc cgtccccttc ggaacgcctt tgaccgccgc ttttgcctcg
     7921 cgttcgttgt aacccagcgc aagcagcgtg ctgacgatgt cttccgtttc gtcggcggcg
     7981 ggtgaggcgg caaacagccc gtccgttacc gtatgcgcga ccagcttgcc gcgcagttcc
     8041 aagaccatac gttcggcggt ttttttgccg attcccggag cggaggagag gcgtttgaca
     8101 tcttcttctg caaccgcccg cgccagctcg tctgccgtca tcgccgacaa aatgcccaaa
     8161 gccgttttcg cgccgatgcc gccgacctta atcagttggc ggaaggtctt gcgttcttcc
     8221 gcagtggcaa aaccaaataa aagatgtgcg tcttcccgaa tgataagctg ggtaaacagt
     8281 tgtacgcttt cacccacggg cggcaggttg tagaaggtct gcatcgatac gtcggcttca
     8341 taaccgacac cgttgacatc gatgacgatt tgcggagggt ttttttcaac cagtttgccg
     8401 gtcagtctgc tgatcatgtg tgccgaatcc tgaagtgtcg ggtgcaaaat gccgtctgaa
     8461 accggttcgg gctccagacg gcacggattg tatcaaattc agtcgtcgcg gcgggaggaa
     8521 atcacgcggc cggtacgggc atcgacaacg actttgtatt cctgtccgtt tttgacgatt
     8581 tcgacatcat agtgcggacg gccgtcgtcg tgttcgagat cgatgtcggt gattttgccg
     8641 ccgacacgcg cccaagccgc tttttcggct tgggcgcggc tgatgatttt gtcttgtttg
     8701 ccgtgttggt gtgcggcgtg tccgtggtcg tcatcgccgt gtccgtcgtg gtgggcgagt
     8761 gcgggggcgg aaatgcccaa cagtgcggtt gcggcggcgg tcaagagaag gtgtttgatg
     8821 ttcatatttg cccttgtaaa tcaggggttg aaaaatgggg atattaataa ggtatcgaat
     8881 aaccgtcaac cggaggtcag taccgcccga accataccgc gtgcctgcgc ttcggcttcg
     8941 gcggcgcgtt cctgcgaggc aaacgggccc attttgacaa cgtattcgta acggcgtttt
     9001 tcaaccgaga ggttcgggct tgatgacgaa gcggcgaaat tttgggcggc ttggttcaga
     9061 taggcttgtg cttcgtgttc cgtaccgaaa gatttcaagt cgataaagat gtctttgttt
     9121 tcggcaaccg gtgcggattg gcccgggacg atttgttcga ttttgacgtg tgccgtccct
     9181 tggctgacaa agcccaattt ttgcgcggcg gctttggata cgtcgatgat gcggttgccg
     9241 tggaaggggc cgcggtcgtt gacgcggacg atgacgcttt tgccgttttt ggtgttggtt
     9301 acgcgcacat ggctggggat gggcagggtt ttgtgggcgg cggtaaaggc gttcatatcg
     9361 tagcggtctc cgccggaagt tttgcgcccg tgaaacctgc cgccgtacca cgaggcgttg
     9421 ccggtttgcg tgaattcggc gactttgtag ctgcggttgg cggaggcgtg cagtttttcc
     9481 gccttgacca ctgcgtcggc ggatgccgtc tgaagggagt gtgtgccgaa cgcggcggtg
     9541 aggaggaaaa gggtttttcg ggttaaagtc aaaatgtgtt ccgttcttga gttgaagacg
     9601 gatgggcatt atgccctacg gacgcgttcc gaaccgccgc acgctgcggc agcggttcgg
     9661 aatgtgtccg aacggttttc agacggcatg aacctgcgtt caaacgccgc ctgcgtaacc
     9721 gtgttgccgc cacgcttcaa agagaatcac ggagacggtg ttggaaaggt tcatactccg
     9781 gctgccgggc cgcatcggca ggcggatttt ttgcgcggcg ggcaggctgt cgaggatgtc
     9841 ggcaggcagc ccgcgcgttt ccggcccgaa cagtaaaacg tcgccttttt gaaacgcggt
     9901 ttcatcgggg cgcgccgtgc ctttggtggt cagggcgaaa atacgtcggc ctgccagcga
     9961 cttgaggcag tcgtcgaagt tttcgtgcac cgtcaggctg gcgaattcgt ggtagtcgag
    10021 cccggcgcgt ttcattttgg cggaatccaa tgggaagccg agcggtttga caaggtgcaa
    10081 atccgcgccg gtattggcgc acaggcggat gatgttgccc gtgttcgggg ggatttccgg
    10141 ctgatataaa acgatggtaa gcataaatat caatcactta taggcgcgta accttgccat
    10201 aaggcggatg gggtgtcaaa aaatttagtt attttttcat tggcgtgcgt gccagcgtcc
    10261 agcagcagat tcggtttgcg cccgattttt tcagcgtctt tgccaattcg tccagcgtcg
    10321 cgccggtggt aaagacatcg tcgattaaca aaatattaca gttttccggt atcggtgtgc
    10381 ggatttcaaa ggcgtttttg atgtttcgcc gccgttcgcc gcctttgagc gtgctttgcg
    10441 gcgggcggtg gtgtcggaat acggtgtgtc ggggcagtat ctgccagccg tagcgttgcg
    10501 ccaacaaccc gacgatgctc tcgctttggt tgaacccgcg ttgcagcagc cgctccctgc
    10561 ttagcggaac gggtaggacg aaatcgaaac attcgtctga aagccggtcg ggcggattct
    10621 gcatcgtcag gtctgccagc ggctgcgcca tgcccaaatc agccaagtgc ttcagcgcgc
    10681 gtatcatatt gctgacgggc ggttcgtaat gcagcgatgc ccacatccgg tcgaatgcgg
    10741 gcggtttttt ctgacatccg ccgcacaccg cgccgccttg aacgtgcctg aaacacaggg
    10801 ggcagctgtt tgccgcgtcg gtgcggtatg ccgccaaatc ggtattgcag ccggcgcaga
    10861 tgccgtctga aacgccggac gaaccgtggc ataatacgca acgcctgata gtgggcgcgt
    10921 ctgcgatgcg ccgccaacaa gagagaaaat tcatgcctga tgctgccaaa aaagtttacc
    10981 tgatacacgg ttggggggcg aaccgccacg cgttcgacga tttgatgccg cgcctgcccg
    11041 caacgtggcc ggtgtccgcc gtcgatttgc ccggacacgg ggacgcgccc ttcgcgcaac
    11101 ccttcgatat tgaggcagct gccgacggca ttgccgctca aatcgatacg tcggccgaca
    11161 ttctcggctg gtcactcggc ggattggtcg cgctgtatct ggcggcgcgc catcccgaca
    11221 aagtccgttc gctctgcctg acggcgagtt tcgcacggct gacggctgcc gaagactatc
    11281 ccgaagggct tgccgcgcct gcactgggca aaatggtcgg cgcgttccga acggattatg
    11341 ccaaacatat caaacagttt ctacaactcc agcttctgca cacgcctgat gccgccgaaa
    11401 tcatcggcag aatcctgccc gatttggcgc gctgcggcac gcctcaagcc ttacaggaag
    11461 ctttggacgc ggcggaaagg gcggatgcgc ggcatttgtt ggacaagata gatgttccgg
    11521 tactgctggt gttcggcggc aaagacgcga ttacaccgcc gcgtatgggc gagtatctgc
    11581 atcggcattt gaaaggaagc aggctggttg tgatggaaaa ggcggcacac gcgccgtttt
    11641 tgagccatgc ggaagtgttt gccgcgctgt gccgcgactt tgtcgaaggg ggtttgacat
    11701 gaatccgcag gacaaatgct ggcaggttca ccgccatctt gccgaacata ccgaccaacg
    11761 cctgacactc gtccgcaacg cgcccgggca tatcctgctt gccggtgcgg atgcggacat
    11821 cagccgcagc ctgttggcga agcgctatcc gccggcggta tttgaagaat acgattcccg
    11881 tgcggatttt ttggcggctg ccgcagccgc gcgcaagggc ggtttctggc aaaaactgac
    11941 gggcaggggc gtggtgcagc actgccaatc cccgaccgtg ccgctgcccg aagcgtgtgc
    12001 cgatatgttg tggtcgaacc tcggactgtt ggcggcggaa caaatccttc ccgtgctgca
    12061 caactgggcg cgcgcgctga agacggacgg gctgctgttt ttcacctgct tcgggcgcga
    12121 taccttggcg gaactgaaat cccgtctgaa agaaaacggc attgaaagcc gcagcgtgat
    12181 gtttcccgat atgcacgact tggccgatat gctcgccgaa aacggctttt acgatccagt
    12241 taccgatacg gcgaagctgg tgttggacta caaaaaggcg gaaacgtttt gggcggatat
    12301 ggacacgctg ggcgtttggc gggcggtggc gtgggacgac gaaaacgccg cgcgttcgtg
    12361 tgtcggggcg atatttgaac gggaaggcgg tttgggcatt acgctggaaa cggtgtacgg
    12421 acacgccgtg aaaaaactgg tgctgccgca gggggagaac gtggtgcgtt tttttccgaa
    12481 gagatgatgt gcagatgacg tctgaagccg tttccaagtt tcagacggca tttgtctgtg
    12541 aaaaccgaca gaaataaagg aaatgccgat gtatagtgaa ttaaatttaa accggtacgg
    12601 cgttggctcg ccttgccgta ctatctgtac tgtccgcggc ttcgccgcct tgtcctgatt
    12661 taaatttaat ccactatgtg ccgatgccgg agacgtatat tgcgtctata acatcagact
    12721 gaagcagtac actgcctgcc aggttacccg agttgaagaa cacggtggca aaaaaacaca
    12781 tgcgaccctg ctggctttgg actggcgggg caacaaaccg cttggggcgg cggagctggc
    12841 ggatttgaaa ccgctttaca aagactttat gtattgggaa cgcggtctgc acatgtataa
    12901 ggcaagtgcc gtcgtgccga cgggatatgt acgggttggg aataccgcgc cgctgtgcgg
    12961 cgaagacacg cagcggtatg cctctttttg gggcgacggc tacgacgtgt accgtcagtt
    13021 gagatggcgg cagatacccg aaaaacagag aaaggcattc aaaaaagccg ccaaaagcaa
    13081 aaataccgtg atgtttgccg gacgggaata cggcatatcc aaacagaatt tgagcgatgt
    13141 ttgggatgat tttgaagacg cgatggaact gaaggcgttt ccctgcctgt cttcgctgtt
    13201 tctgaccaag tggcataaaa atctatatga atatctggag gaatatccgt ttatcacccg
    13261 attgtgtctg gaaaaccacg gtcagaccgt gctggatttc agcaatacgc gcataaccga
    13321 cctttctgtc gatatgaccg gcgtggaatc gctttatctg aacgaaggct tggacagcct
    13381 gaacctgaaa ggcgaaatca aggaaaactg caaggtctgt accgccggaa agggcgcggg
    13441 tctgattttg gaagtgggca aaagcgttcc caaagtgcgg ggtttggaaa acctgaccgc
    13501 cgtcaacgtc atgggcattg ccgatttcga tatgcaaaac ctgtcggaaa cgtatcccaa
    13561 gctcaaaacc atacggctgt ggggcaaacc gggcaatatc gccaattttt ccgccgtatc
    13621 gggatttgag gatttggaag tgttcactgc cgtagatttg ttcggtttcg gcgcggacga
    13681 catccctcat cccgaccggc tgccgaagct gcacaggctg tggatgagca gcctgcccga
    13741 agaggcggcg aaggcagtga agaaacttta taagaaacgg aaggaagacg ggctggacct
    13801 gtggatagaa aaagcccgaa aacccgaatg gctggcgcaa aatttcgaca accccttccg
    13861 cgattgggac ggcgcggagc atatcccgaa aagccatgcc aaaaaagcgg cggagctgta
    13921 ccggaaaacc cgtgccggcg tggtcaaact gctcggcaat ccgcctgaaa acacagggga
    13981 ggggctggca gaggcggtca aagcctatac cggaggtttc aacaaaatgg acaaaaaaca
    14041 ctttatcgac acggtagagc gggaagatat tgccgaggcg ttggaaacga tattggacct
    14101 gataccggat gggtcttgtg ccgacaagga aaaactgttt gaaatatttg ataaaaacag
    14161 gaatttttaa acagaggcaa tgccgtctga aacttggtaa cgggcttcag acggcatccc
    14221 gttccaacac cgccaacacc gccgcaccgt aacgtgcggc tttttcttcg cctacgccgt
    14281 atacggcggc aagctccgcc aaaccttccg gctgtttggc ggcaatggcg cgcagggcgg
    14341 ctttgctgag aatgcggtag ggttcggact gttcgtgttt tgcggtttcg ttgcaccatt
    14401 gaatcagggc gcgcatcagg cagcgtttgt gtttggcggt ttcatcgatg ccgtctgaaa
    14461 acggacggca gacggcgagg atgtcccgtc cgtatttggc ggcgcgtacg ctgcccaagc
    14521 cgtgtacggc ttcgaggtcg gtttcggttt cgggcgtggc ggcaagcata tcggcaaggc
    14581 tttcgtcgga gaggacggta tgcagggcgc agttttccgc ccttgcctgt tcataccgcc
    14641 aggcttcgag tttttgacgc agttgttgtt cgcgttcggt ttgcggacgg atgacggcat
    14701 cgtggctaaa gtcggcagcg ttttggcaga ctttgagtat accgtgtccg aaacgttcgg
    14761 ttttggcttc gcccaagccg tagatgtcgt gcagcccgtt gaggttttgc ggcatttttt
    14821 cgacaaggtc gcgcagggtt ttgtcgccga aaatcatata ggcggggatg ccttcggctt
    14881 cagcctgttt catgcgccaa acgcgcaatg cctgccacag gcgttcttcg cgttcggtac
    14941 gcagccagtt gtctttgagg gtgcgggtgg cgggcttgtc gcgcttgagc gggcgcagca
    15001 tcacttcggt ttcgcctttg aggacttttt tggcggcttc ggtcagttgc aatgcctgat
    15061 atcgggcaat gttgacggtg aggtagccga ggctgatgca ctggcggatg acgctgcgcc
    15121 attctttgtc ggacaattcc gcgccgatgc cgaatgtgga cagttgctcg tgccggttgc
    15181 cgcgtatcca atcgtcgctt ttgccgcgca aaaggttggt gatgtaaccg gcggcaaagc
    15241 gttgtccggc gcggtacacg cagctgagta atttttgcac caacaccgtg ccgtcaaacc
    15301 gtacgggcgg atgcaggcag ttgtcacaat gtccgcaggg ttcggatgct tcgccgaaat
    15361 gtttgagcag cagtacgcgg cggcaggcgg cggtttcgca gacggaaagc atggcatcga
    15421 gtttttgtat ttcgatttgc ttttgcacct cgccgctgtt gccttcggca atccgttcgc
    15481 gcagcaacac ccaatcgttc aagccgtaac acagccaact cacggcaggc agcccgtccc
    15541 ggccggcgcg ccctgattcc tgatagaaat gttcgacact ctggggcata tcgagatggg
    15601 cgacaaagcg cacgtcgggt ttgtctatgc ccatgccgaa cgccacggtc gccaccacga
    15661 taatattgtc ttcatgcgta aagcggcgtt ggttttcctc gcgcacgtcc atgctcaaac
    15721 cggcatgata cggaatcgcg tttaatccgt tttcacgcaa aaactgcgcc gcatcttcaa
    15781 cctttttgcg gcttaggcaa tacacaatgc cgctttgccc cgtcatttct ttgcggatga
    15841 aatccagcaa ttgttttttg ccgttgtttt tttcgataac ctgataataa atattcgtgc
    15901 ggtcaaagct ggagacaaat tcggacgcgt cgtccaagtg cagataatgc ttgatgtcgg
    15961 cgcgcgtggc ggcatcggcg gtggcggtca gggcgatgcg cgggatgttc ggatagcgtt
    16021 cggcaagcat accgagctgt tgatattcgg ggcggaaatc gtgtccccac cggctgacgc
    16081 agtgcgcttc gtcaatggcg aacaggctga cggtttgttg gtcgagaaaa cgtaaaaagc
    16141 ggtcggtaac caagcgttcc ggcgcgacat aaagcagctt cagacggcct tgggcaagct
    16201 tgtcggcaat ctcgcgcgcc tcgtctgccg atgtgccgct gttgactgcc gccgcttcaa
    16261 tcccggccac atgcaggctg gccacttggt cgttcatcag cgcaatcagc ggcgatacga
    16321 caaccgccac gccttcgcgc atcagcgccg gaatctggta acacaaagac ttgcccccgc
    16381 ccgtcggcat cagcaccgtc aaactgccgc cgcctgccaa agtattgatg acatcctcct
    16441 gcctgccgcg aaattcggga tagccgaata cttcgtgcaa aatctgtctg gcggtgggtc
    16501 ggtgcgtcat tgttccgtgt ccggtaaggg tgttggtcgg tcggcggcaa tatgccgtct
    16561 gaaatcggga ttttagaaga gtttgcccac ttccgcccca atatcgtcgg cacgcataaa
    16621 cgtttcgccg atcaggaagg tatgcacgcc gcgcgcccgc ataaattcca catccgcctt
    16681 gcctgtgatg ccgctttcgg taacgacggt tttgccttcc agcgcgggca gcagcgacag
    16741 ggtttggtcg agggagactt caaaagtccg caggttgcgg ttgtttacgc cccgcaacgg
    16801 cgtggtcagg ttgcggcatt tttccaattc ggtttcgtcg tgcagctcga gcaggacggt
    16861 catgcccaat tcgtgcgcca gcgcctcaaa gcgttccaat tgtccctgtt ccagtgcggc
    16921 ggcaatcagc aggacggcat ccgcccccca tgcgcgcgcc tgataaacct ggtattcgtc
    16981 gatgatgaag tctttgcgca gcacgggcag caatacggct tcgcgcgcct gtttgaggta
    17041 ttcgggcgaa ccttggaaat agggttcgtc ggtcagtacc gacaaacacg ccgccccggc
    17101 gttttcatag gcgcgggcaa tctcggcagg gcggaagtcg gggcggatta accctttgct
    17161 cgggcttgcc tttttgattt cggcaatgac ggcgggcagg tttaggcggt gtttgccgcg
    17221 tatcgaatcg atgaagctgc ggacgggcgc ggcttctgcg gcaagtgcgc ggatgtgttc
    17281 ggcgttgacg gcggcttttt gggcggcaac ttcctgtgcc ttggtggcaa ggattttatt
    17341 gaggatgtcg gtcatgtcgt gttccgtatt tgtccgggga aagggggaat attagcatca
    17401 aaccgttaac gcctgtttgt gcggaagctg tcaaaatagg acaggacggt ctgcggcagc
    17461 cattgcaggt gcagcctgcc gccggtgctg ctgacaaagc cggcgtgccc gccgtgtgca
    17521 ggttggaaca gggtaacggc ttcggacgct tcgtccgcac ggggcagggc ttcgggcggc
    17581 aggaaggggt cgttggcggc attgagcagg agcagcggtt tggcaacgtg tttgagcagc
    17641 ggtttgcagg aagtttggcg gtagtagtcg tgccggtcgg caaagccgtg cagcggtgcg
    17701 gtgaaacggt cgtcaaactc gcccagtgtt ttgcaccctg cggcaaatgc cgtctgaaaa
    17761 ccttggagcg aacgtgcttt gggtatcagt gtgcggagga agtagcgcgt gtagagcagc
    17821 cgcgtgatgc cgctgtcgaa gcggctgcct gccgcctctg catcaacggg ggcggatacg
    17881 gcggccgagg cgtgcggcaa tgcctttttg ccctgttcgc ccaaatattt tgccggcgcg
    17941 ttgccgccca gcgatacgcc gacggcgtat atttcacggt aacgcgcggt gagcgtgtcc
    18001 aaagcaaagg cgatttcggc ggtatcaccc aagtggtaga acaccggggc ggtgttcgct
    18061 acgccgccgc agctgcggaa atggacgact gcgccgtgcc aaccccgatt gcgtaccgcg
    18121 agcatcagtt cgaccgcgta atggctgcgg ctgcttcctt ccaaaccgtg aaacagcacg
    18181 accagcggcg catcgggcga aatgccgcct gctgaaaagt cgtaggcggt tttggtttta
    18241 cccgtgctgt cgggaagcat ctcgcggcgg tatgcgggtg cggggtgttg caggaatttg
    18301 gcggcaatcg tgtcggcatt gccgttgcgg aggaaaaagg gcgtgtccgg cggtgtcaaa
    18361 atcataaggt atcggttttt ctgttttcag acggcattgg tgatgcggca gcccgtccgg
    18421 ccggtgcgga cgcgggcgat gcgcgcccgg atataggcgc ggaaaaagcg ttttccgaaa
    18481 aaggatatcg gcatcggtca gctttccacg cgtttgaaat ggcgcggacg gaagcccaaa
    18541 gccgccagag atgcgaaata cagtccgccg ccgacggcaa tcaggatgca gagctgcccc
    18601 gctttccgca ttccgccggc gtgcgcccat tcgaacggca ggcaagcctg cgccgcccac
    18661 agtccgccgc acatcacggc gagcgcgagc agcattttcg ccaagaacgc cgcccaaccc
    18721 ctgccgggcc ggtaaatacc gtgtttgcgc aacaggaaga acaacaatcc ggcgttgatg
    18781 cacgcgccca ggccgatggc gagcgaaagc ccggcgtgtt tcaacggacc gataaaggcg
    18841 aggttcatca actgcgtgca gatgagcgtg aagatggcga ttttgacggg cgttttgatg
    18901 ttttgccgcg cataaaagcc ggatgccaac actttaatca taattaaacc gattaaaccg
    18961 aaagaatagg caatcagcgc gtgttgcgtc atttgtgcgt caaacagcgt gaattctcgg
    19021 tacataaaca gcgtcgccac cagcgggaac gacaataccg ccagtccggc cgccgccggc
    19081 agcgtcagca gcatgcacag gcgcaaaccc cagtcgagca gggcggaaaa ctgttccgta
    19141 tcttggtttg ccgagtgttt ggacaaagtc ggcagcaaaa ttgtaccgag tgcagccccc
    19201 agcacgccgc cgggcagctc catcatgcgg tcggcgtaat acatccatga aacgctgccc
    19261 gattgcagat aagacgcgaa aatcgtgttg ataaccaaag aaatttgcgc cacgctcacg
    19321 cccaaaatcg caggcgccat ctgtttcatg acgcggttga ccgccgcatc tttgaaattc
    19381 agtttgggca gtttcaaaaa gcccagtttc gccagccacg gcagttggaa accgagctgc
    19441 aaaataccgc cgacaaaaac cgcccacgcc agcgcggtaa cgggcggatc gaaatacggc
    19501 acgaaaaaca gtgcgaatac gataaaagag atgtttaaaa acgtgggcgt aaacgcggga
    19561 atgccgaact tatggtagga attgagtatc gatccgacaa aagaagacaa agaaatcaat
    19621 aatatataag gaaacgtaat ccgcagcagg ctgatggaaa gttggaactt gtccgcgtct
    19681 ttggtaaagc cgggcgcgga aacataaatc acccaaggcg cggcaagtat gcccagcgcg
    19741 gtaacgacga tcagcacaaa cgacagcatt cccgcaacgt ggcggataaa agcctccgtc
    19801 gcctctttag aacgcgtttc cttatattcc gccaaaatcg gcacaaacgc ttgggcaaac
    19861 gccccctccg caaacacgcg gcgaagcagg ttgggcagtt tgaacgcgac aaaaaacgca
    19921 tccgtcgcca tacccgcgcc gaatgcccgc gcaatgaccg tatcgcgcac aaatcccaaa
    19981 acgcgcgaca ccatcgtcag gctgccgact tttgccaaag ctccaagcat attcatcgtg
    20041 tttccttttc ggctgaaacc ccgcccttta gggcggcagg atcagacttt atagtggatt
    20101 aacaaaaatc aggacaaggc ggcgaagccg cagacagtac aaatagtacg gcaaggcgag
    20161 gcaacgccgt accggttttt gttaatccac tatatttgaa agggatgtaa cccttccaaa
    20221 tcagggcaac gcatagggcg gtgctttatg tgccgtcctg tgtgttgaaa catcattgtt
    20281 ccccaacagc cgtatccgtc cggggcggcg cgtattgtac gacagaaacc gcttcggatg
    20341 gcatcgggtt tgatgccgtc tgaagcggtt tcccgaaacg aaaacgtcct ttttcggcgg
    20401 caaactgtat caacacgcga aaatacaata aaataccaat atccgattta tttccaacat
    20461 cacggagagc cgtatgaaat ccagacacct cgccctcgcc ctcggcgttg ccgccctgtt
    20521 cgcccttgcc gcgtgcgaca gcaaagtcca aaccagcgtc cccgccgaca gcgcgcctgc
    20581 cgcttcggca gccgccgccc cggcaggact ggtcgaaggg caaaactaca ccgtccttgc
    20641 caacccgatt ccccaacagc aggcaggcaa ggttgaagtg cttgagtttt tcggctattt
    20701 ttgtccgcac tgcgcccgcc tcgaacctgt tttgagcaaa cacgccaagt cttttaaaga
    20761 cgatatgtac ctgcgtaccg aacacgtcgt ctggcagaaa gaaatgctgc cgctggcacg
    20821 cctcgccgcc gccgtcgata tggctgccgc cgaaagcaaa gatgtggcga acagccatat
    20881 tttcgatgcg atggtcaacc aaaaaatcaa gctgcaagag ccggaagtcc tcaaaaaatg
    20941 gctgggcgaa caaaccgcct ttgacggcaa aaaagtcctt gccgcctacg aatcccccga
    21001 aagtcaggcg cgcgccggca aaatgcagga gctgaccgaa accttccaaa tcgacggtac
    21061 gcccacggtt atcgtcggcg gcaaatataa agtcgaattt gccgactggg agtccggtat
    21121 gaacaccatc gaccttttgg cggacaaagt acgtgaagaa caaaaagccg cgcagtaggc
    21181 ccgtttgaaa aatgccgtct gaaacttggt tttcagacgg cattttgatt gggtttagaa
    21241 cgtaaagccc gtttccagtt cttcatcgcc gaccagttcg accaagagcg cgtagagcgg
    21301 ggcgagttcg gcataacggc gcgatacgcg gcgcagatag tttaagaaac gcgggatttc
    21361 cggacggtat ttgtctttgc cgtcgcggta gtacaggcgt gcgaagatgc ctgcaacctt
    21421 caagtgccgc tgcacgccca tccattcgaa ccggcggtaa aactcgtcaa actcggcagg
    21481 gacaggcaag ccggcagccc gcgccttttc ccagtagcgg ataaccaaat ccaaaacaaa
    21541 ctcttcttcc cactcgataa aggcatcgcg caacagcgac accaaatcgt aggaaatcgg
    21601 gccgtaaagc gcgtcttgga agtctaaaac gcccggcctg ccgcgcgtca gcatcaggtt
    21661 gcggacgata aagtcgcggt gcacgtagac tttgggctgc gccaacaagg gcggcagcag
    21721 cgtatcggcg gtttgctgcc aaagttggcg ttgtttgaat gttaattcgc gccccaattc
    21781 ttttgcgaca aaccattccg ggaacaggtt gatttcgcgc agcatcgttt cacggtcata
    21841 ttcgggcaaa accccttcac ggcttgcctt ctgcaatccg accagctcgc cgatggcctc
    21901 cagcaacagg gctttgtgtg ccgcttcgcc ctgctcctga agcatcgcgg tcaaaaacgt
    21961 cgtattgccc aagtcgttca ataccacaaa ccccaaatcc gtgtccgcgt gcaatacctg
    22021 cggcacattg accatgtcaa acagcttctg caccttcaaa taaggcgcga cactcatctt
    22081 gtcgggcggc gcatccatac agacgacgct gccgccgtct gaaaacgccg cacggaaata
    22141 gcggcggaaa tcagcatccg ccgccgcgaa ggacagatcg aagtcccgtt cgggataaac
    22201 ggtctgaagc caatttttca gttcggtttg ccgttgcata acagtatccg ggcatttcgg
    22261 gttacaataa acactattct aaccggtaaa ccgacttgag gggcgatttt ggctcgttta
    22321 ttttcactca aaccactggt gctggcattg ggcttctgtt tcggcacgca ttgcgccgcc
    22381 gataccgttg cggcggaaga ggcggacggg cgtgtcgcag aaggcggtgc gcagggcgcg
    22441 tccgaatccg cacaagcttc cgatttgacc ctcggttcga cctgcctgtt ttgcagtaac
    22501 gaaagcggca gccccgagag aaccgaagcc gccgtccaag gcagcggcga agcatccgtc
    22561 cccgaagact atacgcgcat tgttgccgac aggatggaag gacagtcgca ggttaaggtg
    22621 cgcgcggaag gaagcgttat catcgaacgg gacggcgcag tcctcaatac cgattgggcg
    22681 gattacgacc agtcgggcga caccgttacc gtaggcgacc ggttcgccct ccaacaggac
    22741 ggtacgctga ttcggggcga aaccctgacc tacaatctcg atcagcagac cggcgaagcg
    22801 cacaacgtcc gtatggaaac cgaacaaggc ggacggcggc tgcaaagcgt cagccgcacc
    22861 gccgaaatgt tgggcgaagg gcgttacaaa ctgacggaaa cccaattcaa cacctgttcc
    22921 gccggagatg ccggctggta tgtcaaggcc gcctctgtcg aagccgatcg gggaaaaggc
    22981 ataggcgttg ccaaacacgc cgccttcgtg ttcggcggcg tccccctttt ctatacgcct
    23041 tgggcggact tcccgcttga cggcaaccgc aaaagcggac tgctcgtccc gtccgtatct
    23101 gccggttcgg acggcgtttc cctttccgtc ccctattatt tcaaccttgc ccccaacttc
    23161 gatgccactt tcgcccccgg cattatcggc gaacgcggcg cgacgtttga cggacaaatc
    23221 cgttacctgc gtcccgatta cagcggacag accgacctga cctggctgcc gcacgataag
    23281 aaaagcggca ggaacaaccg ctatcaggca aaatggcagc accggcacga catttccgac
    23341 acgcttcagg cgggtgtcga tttcaaccaa gtctccgaca gcggctacta ccgcgacttt
    23401 tacggcggcg aagaaatcgc cggcaacgtc aacctcaacc gccgcgtatg gctggattat
    23461 ggcggcaggg cggcgggagg cagcctgaat gccggccttt cggttcagaa ataccagacg
    23521 ctggcaaacc aaagcggcta caaagacgaa ccttacgcca tcatgccccg cctttctgcc
    23581 gattggcata aaaacgcagg cagggcgcaa atcggcgtgt ccgcacaatt tacccgcttc
    23641 agccacgacg gccgccaaga cggcagccga ctggtcgtgt atcccggtat caaatgggat
    23701 ttcagcaaca gctggggcta cgtccgcccc aaactcgggc tgcacgccac ttattacagc
    23761 ctcgacagtt tcggcggcaa agcatcccgc agcgtcgggc gcgttttgcc cgttgtcaat
    23821 atcgacggcg gcacaacctt cgaacgcaat acgcgcctgt tcggcggcgg agtcgtgcaa
    23881 accatcgagc cgcgcctgtt ctacaactat attcctgcca aatctcaaaa cgacctgccc
    23941 aatttcgatt cgtcggaaag cagcttcggc tacgggcagc ttttccgcga aaacctctat
    24001 tacggcaacg accgcatcaa cgccgccaac agcctttcca ccgccgtgca gagccgtatt
    24061 ttggacggcg cgacggggga ggagcgtttc cgcgccggta tcggtcagaa attctatttc
    24121 aaggatgatg cggtgatgct tgacggcagc gtcggcaaaa atccgcgcag ccgttccgac
    24181 tgggtggcat tcgcctccgg cggcataggc gggcgtttca ccctcgacag cagcatccac
    24241 tacaaccaaa acgacaaacg cgccgaacat tacgccgtcg gcgcaggcta ccgccccgcc
    24301 cccggaaaag tgttgaacgc ccgctacaaa tacgggcgca acgaaaaaat ctacctgcag
    24361 gcggacggtt cctattttta cgacaaactc agccagctcg acctgtccgc acaatggccg
    24421 ctgacgcgca acctgtctgc cgtcgtccgc tacaactacg gttttgaagc caaaaaaccg
    24481 atagaaatgc ttgccggtgc agaatacaaa agcagttgcg gctgctgggg cgcgggcgtg
    24541 tacgcccaac gctacgttac cggcgaaaac acctacaaaa acgccgtctt tttttcactt
    24601 cagttgaaag acctcagcag cgtcggcaga aaccccgcag gcaggatgga tgtcgccgtt
    24661 cccggctaca tccccgccca ctctctttcc gccggacgca acaaacggcc ctgaccgtcg
    24721 gaaacccggc aggagcaccg ttcctgcaca agatagcatt ccaccgacaa ccccaaaccc
    24781 gccatcaaag gcaggattca aacgataagg aaagaatgat gaaaatcaaa gccctgatga
    24841 ttgccgccgc attgctggca gcagccgatg tccacgccgc accgcaaaag gcaaaaaccg
    24901 cgcccgccaa agcggtcaaa gctgccgcca cggcgcaaaa agaagccgca cccgcacaac
    24961 agcagggcgg tatccgcttt tcagacggca ttgccgccgt tgccgacaac gaagtcatca
    25021 ccaaccgccg gcttgccgaa gccgttgccg aagccaaagc caccctgccc gaagacgcgc
    25081 agataagtga atccgagctg tcccgacagg tgctgatgca gcttgtcaac caatccctga
    25141 ttgtacaggc gggcaaacgc cgcaacattc aggcaagtga agcggaaatc gatgccgtcg
    25201 tcgcacaaaa tcccgccctc aaaaacctca gccccaccca acgccgcgag cttgccgaca
    25261 acatcattgc cgaaaaagtc cgccagcagg cagtgatgca aaacagccgc gtgagcgaag
    25321 ctgaaattga tgccttcctc gagcaggcgc aaaaacaagg catcaccctg cccgaaggcg
    25381 caccgttgcg ccaataccgc gcccaacaca tcctgattaa agccgacagc gaaaacgccg
    25441 ccgtcggcgc ggaaagtacc atccgcaaaa tctacgacca ggcgcgcaac ggcacggatt
    25501 tcgcaggttt ggcacgccga tattcccaag acgcaagcgc gggcaatggc ggcgacttgg
    25561 gctggtttgc cgacggcgta atggttcccg cctttgaaga agccgtccac gcgctcaaac
    25621 ccggacaggt cggcgcgcct gtccgcaccc aattcggctg gcacatcatc aaattgaacg
    25681 aagtgcgcga tgccggcacg ccggaggaac gtatccgcaa ttccgtgcgg caatacatct
    25741 tccaacaaaa agccggacag gcaaccgtca acctgttgcg cgacctgcat tccggcgcgt
    25801 atgtcgacat ccgctaaggc ggtttgaatc caaaagtcat accgatcggg caaaagtccg
    25861 ggcggtatgg cttttttgaa tttcgagtta cttttacacc gccattcgtc attcccgcgc
    25921 aggcgggaat ctagcaacga aaagtaacag gaatttatcg ggaatggccg gagtttaaag
    25981 gtctggattc ccgccttcgc gggaatgacg attcagaagt tacacgaaac tcaaaaaaaa
    26041 aaacgaaacc gaacgaaccg gattcccgct tttacgggaa tgacggcata tcggtttccg
    26101 tgaggacaaa cctagattcc cgcctgcgcg ggaatgacgg gattttagat tgcgggtatt
    26161 tatcgggaat ggcgatttaa aaattaccta aaactaaact taaaagcaac tgaaacttaa
    26221 aaaactaaaa tttcgcctgc gtgggaagga tgggatttca gatttctgtt tttgtgggaa
    26281 tttgccgtat cgggcttcag acggcattgc ctgccgtttt gcccccgggt gcggctgcct
    26341 tgatgtagtt gagcgagaca aactgcttct cggcatccaa ttcggtgatt ttaaacaatg
    26401 cctgcgattt gggcagcgcg tcaaacggaa taccggtcgc gcgcgttgtc agtggcagac
    26461 cttcgatgcg gacgaggtct tctttcagaa tcgtcgcggt cagttcgctg atgccttgtt
    26521 gttgcaggta cacgaggctc cagtaggctt ccatctgccg ttggaagtcg gcgtaggcgg
    26581 cgtaggcggt gtcgaaatcg cgcagggcgg cgaagagcgc ggcatcgctt ttttgataca
    26641 gcggctcggc agtgtcgtcg atcaggctga tcagctgctt ttggttgatg tagtcggcgg
    26701 cgcggcgcag cggcgaggta aaccagccgt aatgctgcac gcccatgccg atgtgcggct
    26761 cggattgggt gctcatgcgc actttgcctg ccggttggac gcggaaaagg ccgggcagcc
    26821 cgttttcgtc tagcatttgc gcccaagtgc tgttggcaag aatcatcatc tcgctgacca
    26881 gcgtatcgat gggcgaaccg cgttcgcggc ggacgacgga gacgttgcct tcttcatcca
    26941 attcgatgct gtaatcgtat tgcggcgcgc ggtcgggttc gtatttgccg cgcgcttttt
    27001 gcagggcggt ggcgaattga tagaaccaaa tcaggtcttg atggtgggcg aacatcattt
    27061 cgcctgcttg gtccaagccg gtttctgcgt tgaaatgcgg ctcgatggct tggatacgca
    27121 ggtttgcggc gatgttgacg gcttcgattt tgcaggtcgg ctcgccgacg ttgaactcgc
    27181 cgtccacatc gaaataaatg ctgacggcag ggcggtatgc gcctgcatcg aggctgaacg
    27241 cggtaatcca gttttcgggc agcatcgtga ttttgccgcc ggggaaataa accgtactca
    27301 accgctgcat aatgatttgt tccattccgc cgccttgtcg gacggcaagc gacggcgcgg
    27361 cgatgtggat gccgacgcgc ttcgtgccgt tgcccaaatc ggtcaggctc aaggcatcgt
    27421 ccacttcggt ggtcgattcg tcgtcaatgg aaaaggcggt aacgtcggcc ttgggcaggt
    27481 cgggcatttc gggaagggag aggtcgggga aacctgttcc tttggggaag tatttgattt
    27541 caaagccgtc ttgcaggtat tgcggaatgg acgtaatgcc gcccgttttt ttcgccagtt
    27601 cgtaggcgga ggttttcagt gcgtcggcgg ctttggtaaa ggctttgtag gtcagcgact
    27661 gtttgtcggg cgcgtgtaag atggttctca aatccgccgc gatttcagac ggcatctcgc
    27721 cgcgtttcaa ggcttccgcc caagcgtcga tttgcgcgtc ttgctgtttt ttgcgttcga
    27781 tggcggcaag cgcttgtttc aaagtttctt cgggcgcggc tttgaacacg cctttggctt
    27841 ttttgtagaa atacaccggc gcggcgtaca gcgcaatcaa agtcgccgcc agctcggttt
    27901 tggtcggcgc atggccgtaa tattcttcgg cgatggcttc ggcggtaaac tccccttcgc
    27961 cgcatacttc ccacaataaa tcggtgtcga tgtccgccgc ctgcgcctgc gcgttttcca
    28021 aaaacgccgc catatcgccg tcaaactcgg caaagacatt gtttgccttc actttggtgc
    28081 gtttgccgtg ttgggtatcg acttggtagg tagcgtcgtt tttttggacg acgacggcaa
    28141 ctttgaactg gccggactct tcgtaaaaaa tattcatttt tcggattttt ctgtggaaac
    28201 tcaagcgggc gattttagca gattaccgaa aatgccgtct gaaaaaaggt tgggggaagg
    28261 cgggtgcggc tttgcggtgc ttgcgttgcg tttttgacgg ggtacaatcg ccgtttttga
    28321 acggaggacg gaatggagaa tgtaaaccgc gtgccggagc aggcacgtta tgatgccgaa
    28381 cgcaggcagg cagacgaagc attggcggac gtgtttccgg cagtcagtat tttcggcagc
    28441 gcgcgcacgc cgcagaatca tacggattat gcgtttgcct gccgtctggc gcggcggctg
    28501 tcggattcgg gtattgccgt catttcgggc ggcgggccgg ggattatgga ggcggcaaac
    28561 aagggcgcgt ttgccgggaa gtcggtttcg gtagggctga acattgccct gccgcacgag
    28621 cagaaaccga atccgtatca ggacatcgcc ttgcggtttt cccgttttgc cgaacgcaag
    28681 gcagtgtttt tccgctattc ccaagcatat gtcgtgatgc cgggcggctt cgggacgctg
    28741 gacgaattgt ttgaaatcct gaccttggtg cagacgggca aagtgccgcc gcgtccggtc
    28801 gttttggttg gaaaggcgtt ttggtcgggc ttggcggagt ggataaacgc gcagcttttg
    28861 gcgcgcggta tgatttccga aggggccgct tctttgttct ccatatcgga cgacgaagac
    28921 gaaatcattg cgtatctgtc ggaacacggg cttcagacgg catagcgtcc tgagagtgat
    28981 gtataattgc aaacaatttg tcaatttttg atgtcttttc cgaacaggat gccgatatga
    29041 tcaaccccat cgcctcgctt tcccccctag acggccgtta tgcccaatcc gttgaagcat
    29101 tgcgcccgat tttttcagag tacggactga tgaaggcgcg cgtcaaagtc gaattaaact
    29161 ggctcaaagc cctggccgcc gagccggaga ttgccgaagt gccgcccttc agtgccgaaa
    29221 cgcttgccga aatcgacaaa gtcatcgaaa acttttcatt agaagacgcg gccgccgtca
    29281 aagccatcga agccacgacc aatcatgatg tcaaagccat cgaatattgg ctgaaaaaac
    29341 gttttgccga agtgccggaa gtcgccgccg tgagcgagtt catccacttc gcctgcacca
    29401 gcgaagacat caacaacctg tcccacgccc tgatgttgca gcaagcgcgc gaaaccgtca
    29461 tcctgcccaa actggcagaa atcatcggaa agctcaccga tatggcgcac gagcttgccg
    29521 ccgtcccgat gatgagccgc acccacggcc agcccgccac gccgaccact ttgggcaaag
    29581 aaaccgccaa tgtcgtgtac cgcctgcaac gccagttcaa aatccttcag gcgcaagaat
    29641 ttctcggcaa aatcaacggc gcggtcggca actacaacgc ccacatggcc gcctatcccg
    29701 atgtggattg ggaaacacac tgccgcaact tcgtcgaaat cagcctcggc ctgaccttca
    29761 acccctacac catccaaatc gagccgcacg actatatggc ggagtttttc caaaccctca
    29821 gccgcatcaa cacgattctc atcgacttca gccgcgacgt ttggggttat atttcattgg
    29881 gttatttcaa acaaaaagtc aaagcgggcg aagtcggctc ttccaccatg ccgcacaaag
    29941 tcaaccccat cgactttgaa aactccgagg gcaacctcgg catggcaaac gccgtattgg
    30001 gctttttggc ggaaaaactg cccgtctcac gctggcagcg cgatttgacc gacagcaccg
    30061 tattgcgcaa tatgggcgtg ggcgtgggct atgccgtgtt gggtttcgcc gcccacctgc
    30121 gcggtctgaa caagctcgaa cccaaccctg ccgcgcttgc cgccgatttg gatgtcactt
    30181 gggagctgct cgccgagccg attcaaaccg taatgcgccg ttacggtgtc gccaatcctt
    30241 acgagaagct gaaagacctg acgcacggta aagacggcat tacgcccgaa gtgttgaaac
    30301 tctttatcga atcgttggaa attccggcag aagccaaagc caaattgctt gagctgaccc
    30361 ctgcgttgta tgtgggcaag gctgaagcgt tggcgaaacg gatttgagtg cttattgaaa
    30421 ccgatgccgt ccgaacgcgc gttcagacgg catttttaag ataacgggac atacggggcg
    30481 atatttatgc aagctgtccg atacaggcct gaaattgacg gattgcgggc cgtcgccgtg
    30541 ctatccgtca ttattttcca cctgaataac cgctggctgc ccggaggatt cctgggggtg
    30601 gacattttct ttgtcatctc gggattcctc attaccaaca tcattctttc tgaaatacag
    30661 aacggttctt tttctttccg ggatttttat acccgcagga ttaagcggat ttaccctgct
    30721 tttattgcgg ccgtgtccct ggcttcggtg attgcctctc aaatcttcct ttacgaagat
    30781 ttcaaccaaa tgcggaaaac cgtggagctt tctgcggttt tcttgtccaa tatttatctg
    30841 gggtttcagc aggggtattt cgatttgagt gccaacgaga accccgtact gcatatttgg
    30901 tctttggcag tagaggaaca gtattacctc ctgtatcctc ttttgctgat attttgctac
    30961 aaaaaaacaa aatcgctacg ggtgctgcgt aacatcagca tcatcctgtt tctgattttg
    31021 actgccacat cgtttttacc aagcaggttt tataccgata ttctcaacca acccaatact
    31081 tattaccttt cgacactgag gtttcccgag ctgttggcag gttcgctgct agcggtttac
    31141 gggcaaacgc aaaacggcag acggcaaaca gaaaatggaa aacggcagtt gctttcatta
    31201 ctctgtttcg gcgcattgct tgtctgcctg ttcgtgatcg acaaacacga tccgtttatc
    31261 ccgggaataa ccctgctcct tccctgcctg ctgacggcgc tgcttatccg gagtatgcaa
    31321 tacgggacac ttccgacccg catcctgtcg gcaagcccca tcgtatttgt cggcaaaatc
    31381 tcttattccc tatacctgta ccattggatt tttattgcct tcgcccatta cattacaggc
    31441 gacaaacagc tcggactgcc tgccgtatcg gcggttgccg cgttgacggc cggattttcc
    31501 ctgttgagct attatttgat tgaacagccg cttagaaaac ggaagatgac cttcaaaaag
    31561 gcatttttct gcctttatct cgccccgtcc ctgatgcttg tcggttacaa cctgtattca
    31621 agagggatat tgaaacagga acacctccgc ccgctgcccg gcgcgcccct tgctgcggaa
    31681 aataattttc cggaaaccgt cttgaccctc ggcgattcgc acgccggaca cctgcggggt
    31741 tttctggatt atgtcggcgg cagggaaggg tggaaagcca aaatcctatc cctcgatccg
    31801 gagtgtttgg tttgggtgga tgcgaaactg gcagacaatc cgttatgccg gaaataccgg
    31861 gatgaagttg aaaaagccga agccgttttc attgcccaat tctatgattt gaggatgggc
    31921 ggccagcccg tgccgagatt tgaagcgcaa tccttcctga tacccggatt ccaagcccga
    31981 ttcagggaaa ccgtcaaaag gatagctgcc gtcaaacccg tctatgtttt tgcaaacaac
    32041 acatcaatca gccgttcgcc cctgagggag gaaaaattga aaagatttgc tataaaccaa
    32101 tacctccggc ctattcgggc tatgggcgac atcggcaaga gcaatcaggc ggtctttgat
    32161 ttggttaaag atattcccaa tgtgcattgg gtggacgcac aaaaatacct gcccaaaaac
    32221 acggtcgaaa tacacggccg ctatctttac ggcgaccaag accacctgac ctatttcggt
    32281 tcttattata tggggcggga atttcacaaa cacgaacgcc tgctcaagca ttcccgaggc
    32341 ggcgcattgc agtagcctgc cttcttgtcg gatattgcct ttggcagcct atgccgctgt
    32401 ttgccctttg aggcggcttt tattttgccg ttttgaggcc ggagtcggga ataaccgttt
    32461 tttgatgatt ttccctcccc ggctgtgtca tcaaattcct agttgccttt ccaaactctc
    32521 caccagattg tcatccagtt tcaaagcctg cgacaggcgg gcgaggaaga cggtttcttt
    32581 ccgcgacaaa tcggcacaga ccaaccttgc cgccagatag gcctccgccg ccaacgcctc
    32641 atcgttgccg acggcggcgg cgatgtcccc gatgcttgcg ggcaggcggt attcggcggc
    32701 gagccatgcg gcagtttcgg ggtctgtgcc gctttcctgt tcgatagtcc ggcgttcggc
    32761 ttcgtctatc atgccgtctg aagcggcggc ggctatcatg gtacgcaata cggtgcggct
    32821 gtatgtttct tcggtttttc cggcaggttg gaaatcgctt tgtgttacgg ttgcccgccc
    32881 tttgttttgc tgccacatct gatagccccg gtaggcgagg tagcccaaag cggcggtcga
    32941 accgattttg gtgatggttt tgcggttttt accgttcagc agcatggagg cgacaccggc
    33001 aaccagcgcg cctccgccga atgaattgag cgggctgccg gagaatgtgc tgcctttttt
    33061 ttgaaccgtg cttaagactt ggttgagcaa ccgggtgaag ttcatgattt ttcctttctg
    33121 ttgcgggaag ggcggtatgt ttaccctatc cttttaaacg gtggcaggcc ggccaataat
    33181 tgttggccgt accgctgcgt tttgatgcgg ttgtcgagga tggttacgcg gccgtagtct
    33241 tgttcggtgc ggatgaggcg gccgacggcc tggatgagtt tgatgccggc ttcggggacg
    33301 gtgatttcga tgaaggggtt gccgccgcgt tgttctatcc aacggttttg ggttttttcg
    33361 atggggttgt cgggcatggc gaaggggagt ttggcgatga tgacttgcac gcaggcggtg
    33421 ccgggcaggt cgagcccttc ggcgaagctg tcgagtccga agatgatgct ggctttgcct
    33481 tcttctatgg cttggtggtg tttttgcagg aggacggctt tgggtaattc gccttgtacg
    33541 agcaagagcg gcaggtagtc tccgggcagg tgcagggcga catcctgcat ttgtttgcgc
    33601 gaggaaaaca ggacgagtgt gccgatggct tcggtgggcg aaatcagctt gggcagccat
    33661 tcgatgacgg cggcggtgtg ggcttcgggg tctttggggc tggcgtatat ggaggggatg
    33721 tagagttcgc cctgtttttc aaagtcaaag gggcttttga gggcgagggt ggtggtttcg
    33781 ggcagccaca gcaggccggt ttggcgcaaa atcaagttga agctgccgag cgattgcagg
    33841 gtggccgaag tcagcaccgc gcctgccgcg cgccgccaca ggctgttggc aaggtgggac
    33901 gcgctgctga tggggctggc attgaaaata tagtcgtttt tgtcgtcggc acggcgggct
    33961 atccatttcg ccaacggctc ctcgccctca atggaaacag tggagagcaa atcccaaacc
    34021 gcgctgattt gttcgatacg ggcgataaaa aggccgaact cgccggtcag gcggtcgatg
    34081 agcgcaccgt cctgttcttt ttcgcggcgt gcggcggaaa gcgcatcgtt cagcccgaca
    34141 acgtgtttga gcaggctgcg tgcagcaatg gccgtattgg aaacggtggt ttcgaggcct
    34201 tcggggattt tgccgtcttc ccacagccaa gtcggttcgc tgttggttcg tctgtcgttt
    34261 tcagacagcc ccatacttaa agacggctct tccgccaaat ggaattgcca ttcgtgcagg
    34321 ctgtcgagca aggatgcggc ggcttcgtcg gcaaggttgg caagttcggc tttatcggta
    34381 agcgcggcaa ttttgccggt aagctgcggc agtttttcca gcgtccaaac ggcaatattc
    34441 catgaatgtt cggcggcaaa acggctgagg gcttttttgg gcaggtggtg cgcttcgtct
    34501 atgcaataga aactgttttc gggcgcaggc agaatcacgc cgccgcccat gctgatgtcg
    34561 gcaagcagaa gatcgtggtt ggcaacaacg acatcgacgg tttccaacat atcgcgtgcc
    34621 aggtaaaaag ggcattccgg acggttggga caggcggctt tcaggcagcc gtggcggtcg
    34681 ttggtcactt tgagccaaat cgcgtcatcg attttttccg gccaagcgtc gcggtcgccg
    34741 ttgaaccgtc gggcggaaaa ttcgtcggcg atgtcgcgca gcagcttcaa ttcttccggc
    34801 ttgggtttgc tgtcccacaa gacggcgggg gcttcaaagc cgagcaggtt ttgctgggcg
    34861 ttgctttgcg tcagttgata gagtttgtag gggcagagat agcggccgcg ccctttggca
    34921 agtgcgaagg tcagttccaa accgcttttt tcgaccagaa acggcaggtc gcggtctacc
    34981 aactgctcct gcaaggcaac cgtcgcgctg ctcacaatca gccgcttgcc gcgtgtttgc
    35041 gccatgatgc cgcccgcaag caggtaggca agcgatttgc ccacgccggt cggcccttcg
    35101 attacggcaa tgctttcgcc ctcgcgcttg ggcggctcgc cgccttcttc gcgcgtcaac
    35161 gtccgcgaaa aagcgttggc aaccgccgca atcatttccc gctgcgaagc acgcggacgg
    35221 aaaccgggca ggtttttgcc gatattttgg taatggtcgc ggatggcgtt tttttctaaa
    35281 tcggtgagca tagtatcggt gggcggatga tttggggtca ttttaacatt gcgcggatgc
    35341 ggtacggtat cgttgtcgga cggtggttcg ggcatatctg attattgaaa gtaaaaaaaa
    35401 cggaagatat tgggtcatcc gtacaaaatg ccgtctgaag cgggaaacgg gcttcaggcg
    35461 gcattgccgc gcttatacgc cggcgacggg gcgggcggga tagccgtggg tatcgaccga
    35521 acaggcaaac cgccaaggcg tgtggacggt gtcggcggac aggtgggcga gttcgggaat
    35581 gtgccgtttg ataaaagtac cgtccgggtc ggtacggtat gaggcggcgg caatgtcggg
    35641 gcaggtgtgc cgtgaggcgg caagccgcca gttgccttgg ttgattgccg catcgaaatc
    35701 ggtcagctgc cgggcaaacc atatctcgcc ttcgcggcgg gggaggttta aaacgtggca
    35761 gaaaaaatcc gcgctcaagc gtctcagggc ggggtggagg ctgccggttt tgtgcaaaca
    35821 gcgcatcgcg gcatcgataa tcggaatgcc ggtccggccc tgctgccaaa gcgtcaggcg
    35881 cagggtgtgt tccggattgc cgtctgaagg gtcgtcatcc gcgtgctgca aggcaagttg
    35941 aaggaaaaaa tcgcggcgga tgatgttgtc cgcccacgcg ttcagacggc gttcgaggct
    36001 ttcccgcgcg agcaggcgcg gcgagatgca gccgacactc aaatacgcgc ccatcagcga
    36061 agtgtttttg cgcgaaggga aatcctttaa aacggagtag gaagccgcct gttcgagaaa
    36121 ccgccgccac tgccgccaag ccgccgtttc gccgccgttt tgcggcagga agatgccgtc
    36181 tgaaagcgcg gcaggcggcg gggcgggcag gttttcgggg aagggttggc ggtatgccgc
    36241 gaataggtcc gaaccggcgg ggggctgctt ggaaaagcgg tcgagccata cttcgcggta
    36301 gcggttgaaa tcggtgtgtg ccgtaccgtt gcctggtgtc aggtcggttt tgccgaaaac
    36361 ggaacggtcg ttgacgaagg ttaacgcgat gccgtgtttg tccaattcgt gccaaagggc
    36421 gttgtcggcg agtttgtcgg caaaagtatg ggattcgtcg gcgatgacgg cgcggatatt
    36481 gaggcggacg gcgagccgga caagcccggc aggcgatgcc gccgtgtaga gcgggatgcc
    36541 gcgccttgcc agcccttggg cgagttcggc ggcggattgg cggtagaacg cggcgcggcg
    36601 cgggttgtct gtttcggcat cgtcaatcca aatgccgata acgggcgaac cttcggcaac
    36661 ggcggcgcat aaggcggcgt tgtcgcggat gcggaggttt tggcggaacc agacgagcgt
    36721 gtgcgcggcg cgcgtgtccg cataaagggg gagggcggtt tcagacggca tttcggcagc
    36781 ctttcctgct ggcgattttt tcgttcagaa aatcgatgaa actgcggact ttcgcactca
    36841 aaaatgccct gtccgcataa acggcgttca gccggtcggt cgggacggcg tatccgggca
    36901 gcagcctcac cagcgggccg cagcgcaaat cgtgttccgc cgcccaaagc ggctgataac
    36961 cgatgcacgc gcccgcctta atcatttcgc gcatcatcag cgtgttgtcg gtacggatga
    37021 cgggggtcag ttcaagccgg tatttcttgc cgtccgattt gcgggtgagg tcgagtttct
    37081 gctggttggt gtaggtcggc aggacggcag gcagccccgc cacttcttcc ggtgtttccg
    37141 gcacgccgtt gcgcctcagg aagtcgggcg aggcaagcag ggcaaattcg atttccgcca
    37201 gcgggcgcgc aatcagcgaa ggggaaaggg tttgggaaac gcgcaacgcc aaatccacgc
    37261 cttcggcaat caaatcgacg tggcggttgt ccaaaatcag ttccaacgcc acttcgggat
    37321 aacgttcgcg gtattccgcc agccagttgc atatctggct gccggcaaac cacagcggca
    37381 tcgttacgcg cagcagcccc tgcggttttt ccgtcccccc ggcggctttt tgcgcggcat
    37441 cgtcgagcgt gtcgagcgcg taactgcatt gccggtagta ttcttccccg gcttcggtca
    37501 ggctgaggtt gcggctgttg tggtgcagga gtttggcttg gacggtgttt tccaagtgac
    37561 tgacgtgttt gcttgccatt gcggtggaga tgccgagcgc gtcggcggcg cgggtgaagc
    37621 cgccgctttg gacgacttgg cggaaaactt tgaggctgaa cagggtgtcc atattttctt
    37681 gtgtggaaaa gttgtatcaa taaaagcagt atatatttga aaaagggaaa catctatact
    37741 ctgccgcctg aaatgaagac aaatatcaaa ggagctttta tgtccgattg ctgcaaccgt
    37801 atccaacctg ttttgctttc tgttttgcgt atcgtaaccg cctacctgtt tttgttgcac
    37861 ggtacgtcga aaatcttcgc cttccccatt gaaatgggca gcggttcgtc cggcgggctg
    37921 ttgctgcttg ccggtatttt agaaattgtc ggcggcattt tgctggtgtt gggcctgttt
    37981 gcgcgccctg ccgcgtttgt tttgtccggc cagatggcgg ttgcctattt tatggcacac
    38041 gcttccggaa atgctttgtt cccgattgcc aacggcggcg agtccgcagt gctgttctgc
    38101 ttcgtatttc tctatatcgc ggcagcgggc ggcggagcat ggtcgctgga caggctgttt
    38161 ttcaagcgta aagcctgaac cggactgcct aaagtgtatt ttgttgaatg tttttgagga
    38221 aaagaaatga gccgtcaatc cctgcaacag gctgccgaaa gccgccgttc cgtttattcg
    38281 ttaaataaaa acctgcccgt tggcaaagat gaaatcgtcc aaatcgtcga acacgccgtt
    38341 ttgcacacac ctttttcgtt caattcccaa tctgcccgcg tggtcgtgct gtttggcgaa
    38401 gagcatgacg agatactact ttaattgaca acagcatctt tacaattcat tttcaaccca
    38461 ttgaatttca atatttgaaa attca
//
LOCUS       DAXGCP010000009        37076 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.009, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000009 DAXGCP010000000
VERSION     DAXGCP010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 37076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37076
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.009"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(114..329)
                     /gene="rpmE"
                     /locus_tag="ACFJCW_000398"
     CDS             complement(114..329)
                     /gene="rpmE"
                     /locus_tag="ACFJCW_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HFC4150642.1"
                     /translation="MKQGIHPNYREVNVTCSCGNKFVTKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
     gene            464..874
                     /locus_tag="ACFJCW_000399"
     CDS             464..874
                     /locus_tag="ACFJCW_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HFC4150643.1"
                     /translation="MESKFFFLLLRFAGSVLPPSHMRGIGIIGRRVLGFLARRISPHI
                     GRGAYVFPDTVLGDGSGRGAYVFPDTVLGDGSGIGANCEICRGLVVGKNVMMGPECLL
                     YSTNHKFDREKNALRATRKSVRLRWRTMSGRGAG"
     gene            880..1008
                     /locus_tag="ACFJCW_000400"
     CDS             880..1008
                     /locus_tag="ACFJCW_000400"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HFC4150644.1"
                     /translation="MAGVTVGRGSVVGAGAVITKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(1089..1577)
                     /locus_tag="ACFJCW_000401"
     CDS             complement(1089..1577)
                     /locus_tag="ACFJCW_000401"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HFC4150645.1"
                     /translation="MKKILTAAAVALIGILLATVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKVIKTANDYKNKDFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVIYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(1574..1957)
                     /locus_tag="ACFJCW_000402"
     CDS             complement(1574..1957)
                     /locus_tag="ACFJCW_000402"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC4150646.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFLEEARWAFFEKRGLMHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGMRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            complement(1957..2319)
                     /locus_tag="ACFJCW_000403"
     CDS             complement(1957..2319)
                     /locus_tag="ACFJCW_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HFC4150647.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            complement(2444..3271)
                     /locus_tag="ACFJCW_000404"
     CDS             complement(2444..3271)
                     /locus_tag="ACFJCW_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HFC4150648.1"
                     /translation="MKKTAYAILLLIGFASAPAFAETRPADPYEGYNRAVSKFNDQAD
                     RYIFAPAARGYRKVTPKPVRAGVSNFFNNLRDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGVPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYPPKNIVFHTPAGRWGTTAAAAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAEPAVHEDSVSETQAEAAGEAETQPGTQP"
     gene            complement(3268..3546)
                     /locus_tag="ACFJCW_000405"
     CDS             complement(3268..3546)
                     /locus_tag="ACFJCW_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HFC4150649.1"
                     /translation="MHTELKNGTLHIGGDITVKTLTGDAFGRFRQQCRLKETIAVDFG
                     GVKRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            complement(3597..4187)
                     /locus_tag="ACFJCW_000406"
     CDS             complement(3597..4187)
                     /locus_tag="ACFJCW_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HFC4150650.1"
                     /translation="MKKSSFISALGIGILSIGMAFASPADAVGQIRQNATQVLTILKS
                     GDAASARPKAEAYAVPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKFKNATVNVKDNPIVNKGGKEIVVRAEVGIPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGIDGLIAELKAKNGGK"
     gene            complement(4218..4712)
                     /gene="mlaD"
                     /locus_tag="ACFJCW_000407"
     CDS             complement(4218..4712)
                     /gene="mlaD"
                     /locus_tag="ACFJCW_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HFC4150651.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNAEGGNAE
                     KAAE"
     gene            complement(4763..5539)
                     /gene="mlaE"
                     /locus_tag="ACFJCW_000408"
     CDS             complement(4763..5539)
                     /gene="mlaE"
                     /locus_tag="ACFJCW_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HFC4150652.1"
                     /translation="MNFIRSVGAKTLGLIQSFGSITLFLLNILAKSGTAFARPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTGQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVSWLGLDSGIFWPQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCIPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            complement(5587..6387)
                     /locus_tag="ACFJCW_000409"
     CDS             complement(5587..6387)
                     /locus_tag="ACFJCW_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC4150653.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILNDINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTQLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            6560..7475
                     /locus_tag="ACFJCW_000410"
                     /pseudo
     CDS             6560..7475
                     /locus_tag="ACFJCW_000410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            7583..9014
                     /gene="aldA"
                     /locus_tag="ACFJCW_000411"
                     /pseudo
     CDS             7583..9014
                     /gene="aldA"
                     /locus_tag="ACFJCW_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(9096..10026)
                     /gene="ppk2"
                     /locus_tag="ACFJCW_000412"
                     /pseudo
     CDS             complement(9096..10026)
                     /gene="ppk2"
                     /locus_tag="ACFJCW_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688308.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
     gene            10194..12068
                     /locus_tag="ACFJCW_000413"
     CDS             10194..12068
                     /locus_tag="ACFJCW_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HFC4150654.1"
                     /translation="MPYFALFDDAVSGRAKLYQNHVESRFFRPEELDALDGALQSGWQ
                     KGLHSVLFADYEFGLPLMGMESERGGNIALHWFADCADTDAESWLARHSDGIPAGIST
                     PQSSVSETDYLDRIRQIHEAIRRGDTYQINYTTRLHLQAYGNPVSLYRRLRQPVPYAV
                     LSHLPDEAGQSAWTLCFSPELFLNIASDGIISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIRAQALPDTSF
                     ADTLRAAFPCGSITGAPKKMSMQIIESLETEARGLYTGSIGYLNPCSGGLGFEGAFNV
                     VIRTLSLKPVSDGIVSGIGGTDSNAQARTAGQGGETPHPFEANPPYRGVYGVGSGIVI
                     DSDPAAEYRECGWKARFLNELRPDFGIFETLRAENRQCALLDRHLCRLKTSAQALNLP
                     LPDGCENQIKQYIADLPDGAFRIKALLASDGISLSHAVLNRLTDKQRVIISPTILPAQ
                     NYLRRFKTTHRAIFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKHRGQWLTPS
                     LDLDILNGIMRQAVSDEPQKYLHTNQVIETHITQKTLQGAEEIRLSNALRGVFAAVLA
                     "
     gene            complement(12129..13745)
                     /locus_tag="ACFJCW_000414"
     CDS             complement(12129..13745)
                     /locus_tag="ACFJCW_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC4150655.1"
                     /translation="MMRRVRRAWGLRRFCRRRPAVFFKEGKLKDSVYRVCRLCAALCV
                     WGAVGAYAAGLPDVRDDAAALRAQRAAAEGWAGMPPEGDSAANGGSRVIDGDFLLSRP
                     QLLEHVLRDALNGNQADLIASLADLYAKLPDYDAVLYGRARALLAKLAGRPAEAVARY
                     RALHRDNAADERVLLDLAAAEFDDFRLKSAGLHFAEAAKLDLPAPVLENVGRFRKKTE
                     GLTGWHFSGGISPSVNKNANNAAPQYCLQGGGSRICSVTGPVRAAGLDYEAGAEKLTA
                     LADNHYLLFRANVGGTSYYFSRKSAYDDAFGRAYLGWQYKNARQTVGVLPFYQAQLSG
                     SDGFDAKTKPPADRRLAPYMLAHGAGVQLAHSYRLSRRSQLSVSLERYRQRYREQGRA
                     ERNDGWQDGLYVSLARRLGGSATVFGGWQFARFVPKRETVGGAVNNAAYRRNAVHIGW
                     AQEWGGTGGLNSRIAASYAHRNYKGIAAFSTEAQRNREWNVSLALSHDKLSYKGIVPT
                     LNYRFGKTESNVPYAKRRNSEVFVSADWRF"
     gene            13988..15071
                     /gene="hupA"
                     /locus_tag="ACFJCW_000415"
                     /pseudo
     CDS             13988..15071
                     /gene="hupA"
                     /locus_tag="ACFJCW_000415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupA"
     gene            15099..17528
                     /gene="hupB"
                     /locus_tag="ACFJCW_000416"
     CDS             15099..17528
                     /gene="hupB"
                     /locus_tag="ACFJCW_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemoglobin-haptoglobin-utilization protein HupB"
                     /protein_id="HFC4150656.1"
                     /translation="MPIPFKPVLAAAAIAQAFPAFAADPAPQSAQTLNEITVTGTHKT
                     QKLGEEKIRRKTLDKLLANDEHDLVRYDPGISVVEGGRAGSNGFTIRGVDKDRVAINV
                     DGLAQAESRSSEAFQELFGAYGNFNANRNTSEPENFSEVTITKGADSLKSGSGALGGA
                     VNYQTKSASDYVSEDKPYHLGIKGGSVGKNSQKFSSITAAGRLFGLDALLVYTRRFGK
                     ETKNRSTEGDVEIKNDGYVFDPANPSPSRYLTYKATGVARSQPDPQEWVNKSTLFKLG
                     YNFNDRNRIGWIFEDSRTDRFTNELSNLWTGTTTSAATGDYRHRQDVSYRRRTGVEYK
                     NELEHGPWDSLKLRYDKQRIDMNTWTWDIPKNYDTNGINGEVYHSFRHIRQNTAQWTA
                     DFEKQLDFSKAVWAAQYGLGGGRGDNANSDYSYFAKLYDPKILASNQAKITMLIENRS
                     KYKFAYWNNVFHLGGNDRFRLNAGIRYDKNSSSAKDDPKYTTAIRGQIPHLGSERAHA
                     GFSYGTGFDWRFTKHLHLLAKYSTGFRAPTSDETWLLFPHPDFYLKTNPELKAEKAKN
                     WELGLAGSGKAGSFKLSGFKTKYRDFIELTYMGVSSDDKNNPRYAPLSDGTALVSSPV
                     WQNQNRTAAWVKGIEFNGTWNLDSIGLPKGLHTGLNVSYIKGKATQNNGKETPINALS
                     PWTAVYSLGYDAPSKRWGVNAYAARTAAKKPSDTVHSNDDLNKPWPYAKHSKAYTLFD
                     LSAYLNIGKQVTLRAAAYNITNKQYYTWESLRSVREFGTVNRVNNKTHAGIQRFTSPG
                     RSYNFTIEAKF"
     gene            17536..17691
                     /locus_tag="ACFJCW_000417"
     CDS             17536..17691
                     /locus_tag="ACFJCW_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150657.1"
                     /translation="MCQCRLKPDDLGFRRHFLRSHRRPLSGLYQAQSRNSPSFPQLSV
                     IPREVGI"
     gene            complement(18421..19767)
                     /gene="mnmE"
                     /locus_tag="ACFJCW_000418"
     CDS             complement(18421..19767)
                     /gene="mnmE"
                     /locus_tag="ACFJCW_000418"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HFC4150658.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAQALCGKTPEP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMEMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASGRSAARLALRSLKGDFSRRIHGLV
                     EGLITLRMLVEAALDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGLNEKTRMILDTLPSDLKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLCEAGWQGESEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            20205..24599
                     /gene="app"
                     /locus_tag="ACFJCW_000419"
     CDS             20205..24599
                     /gene="app"
                     /locus_tag="ACFJCW_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HFC4150659.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQARAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALAGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTNGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYADLNKYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKDWFYDEIFAGDTHSVFYEPHQNGKYFFND
                     NNNGAGKIDAKHKHYSLPYRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDKGKGELILTSNINQGAGGLYFEGNFTVSPKNNETWQGAGVHISDGSTVTWK
                     VNGVANDRLSKIGKGTLLVQAKGENQGSVSVGDGKVILDQQADDQGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNGHSLSFHRIQNTDEGAMIVNHNQDKEST
                     VTITGNKDITTTGNNNNLDSKKEIAYNGWFGEKDATKTNGRLNLNYQPEEADRTLLLS
                     GGTNLNGNITQTNGKLFFSGRPTPHAYNHLGSGWSKMEGIPQGEIVWDNDWIDRTFKA
                     ENFHIQGGQAVVSRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTSCTEK
                     TITDDKVIASLSKTDIRGNVSLADHAHLNLTGLATLNGNLSAGGDTHYTVTRNATQNG
                     NLSLVGNAQATFNQATLNGNTSASDNASFNLSNNAVQNGSLTLSDNAKANVSHSALNG
                     NVSLADKAVFHFENSRFTGKISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITLNS
                     AYRHDAAGAQTGSAADAPRRRSRRSLLSVTPPTSAESRFNTLTVNGKLNGQGTFRFMS
                     ELFGYRSGKLKLAESSEGTYTLAVNNTGNEPVSLEQLTVVEGKDNTPLSENLNFTLQN
                     EHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAGETEAALTAKQAQLAAKQQAE
                     KDNAQSLDALIAAGRDATEKAESVAEPARQAGGENAGIMQAEEEKKRVQADKDTALAK
                     QREAETRPATTAFPRARRARRDLPQPQPQPQRDLISRYANSGLSEFSATLNSVFAVQD
                     ELDRVFAEDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGILFS
                     HNRTGNTFDDGIGNSARLAHGAVFGQYGIGRFDIGISAGAGFSSGSLSDGIRGKIRRR
                     VLHYGIQARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLAFNRYRAGIKA
                     DYSFKPAQHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIKGF
                     TLSLHAAAAKGPQLEAQHSAGIKLGYRW"
     gene            24737..24847
                     /locus_tag="ACFJCW_000420"
                     /pseudo
     CDS             24737..24847
                     /locus_tag="ACFJCW_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(24839..25534)
                     /locus_tag="ACFJCW_000421"
     CDS             complement(24839..25534)
                     /locus_tag="ACFJCW_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC4150660.1"
                     /translation="MFPDKYKLSLEENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     INGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVNISLLKRINNIVAKDDSLVPV
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMAGGCGILEISEMQMPRFNEKLSAFYRTGDDTDISKFVYQNC
                     ISGIDYFGADEDI"
     gene            complement(26096..28888)
                     /gene="polA"
                     /locus_tag="ACFJCW_000422"
     CDS             complement(26096..28888)
                     /gene="polA"
                     /locus_tag="ACFJCW_000422"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HFC4150661.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMGQNLTAPDGAPTGALYGVLNM
                     LRRLRSEYPHDYCAVVFDAKGKNFRHQMFEEYKATRPPMPDDLRPQAEALPDLVRLTG
                     WPVLVIGQVEADDVIGTLAKQGAEHGLRVIVSTGDKDMAQLVDERVTLVNTMSGETLD
                     IEGVKAKFGVRPDQIRDYLALIGDKVDNVPGVEKCGPKTAVKWLEAYGSLQGVMEHAP
                     EIKGKVGENLQAALPQLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLAVDFK
                     RWGFRTWLKEAESNMNTGSTDDLFGSDSIGEQAALNAEIPSEKRAEKATAPEKLDYQA
                     VTTEAQFAALLDKLAKADTIGIDTETTSLDAMNAELVGISIAFQAGEAVYIPVGHSLT
                     AAPEQLDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNNIAGDAMLASYI
                     IESHLGHGLDELSGRWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALR
                     LEARLRAQMDDKQLEMYEKMELPVAQVLFEMECNGVQIDRAELARQSAELGAELMKLE
                     QEAYAAAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPL
                     PKIILQNRSLAKLKSTYTDKLPEMISPRDNRVHTTYAQAVAITGRLASNNPNLQNIPI
                     RTAEGRRVRRAFTAPPGSVIVSADYSQIELRIMAHLSGDKTLIAAFQSGEDVHRRTAA
                     EVFGTAPENVSPEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLSAKNFIDRYFARYPG
                     VAEYMQRTKEQAAAQGYVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDL
                     IKRAMINVRNWLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDV
                     PLVAEVGVGENWEEAH"
     gene            complement(29033..29539)
                     /gene="luxS"
                     /locus_tag="ACFJCW_000423"
     CDS             complement(29033..29539)
                     /gene="luxS"
                     /locus_tag="ACFJCW_000423"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HFC4150662.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCIPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGAGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVLNVKDQSKIPELNEYQCGTYLMHSLAEAQQIAQNVLARKVAVNRNGDLA
                     LDESLLNA"
     gene            complement(29561..29980)
                     /locus_tag="ACFJCW_000424"
     CDS             complement(29561..29980)
                     /locus_tag="ACFJCW_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HFC4150663.1"
                     /translation="MAQLPLYRTAEIGNFTVGTPKVLESFSKHIPYGVVFEDDGNTGY
                     FYAASQEGILDALHIYNVEDVSDKHIPNHVLILWDGACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAGGEWVKVENRVLDDELLDKILSRKPT"
     gene            complement(30013..30336)
                     /gene="cyaY"
                     /locus_tag="ACFJCW_000425"
     CDS             complement(30013..30336)
                     /gene="cyaY"
                     /locus_tag="ACFJCW_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HFC4150664.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAGD
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDSRDFYDVLNEALSAASGEAV
                     EIAEL"
     gene            30407..30577
                     /locus_tag="ACFJCW_000426"
     CDS             30407..30577
                     /locus_tag="ACFJCW_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HFC4150665.1"
                     /translation="MKYGVFFAAATALLLSACGYKGGLYLPKEGDTARFGVIQTGLQL
                     QGKPQSAPPTQK"
     gene            30588..31808
                     /gene="lysA"
                     /locus_tag="ACFJCW_000427"
     CDS             30588..31808
                     /gene="lysA"
                     /locus_tag="ACFJCW_000427"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HFC4150666.1"
                     /translation="MTLFCEQVPYPRLAEEFGTPLYVYSQSALTGAFENYQTAFAALN
                     PLVCYAVKANGNLSIIKHFASFGSGFDIVSGGELARVLAAGGDAAKTIFSGVGKSEAE
                     IEFALNAGVKCFNMESIPEIDRIQKIAARLGKTAPVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYKDEGVPDLGAYARAVQKLMGTRRLKLILEPGRSLVGNAGA
                     LLTRVEFVKHGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKNIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNTRNRAAEVLVDGGGYKLIRRR
                     ETLEQQMANELACL"
     gene            32002..32424
                     /locus_tag="ACFJCW_000428"
     CDS             32002..32424
                     /locus_tag="ACFJCW_000428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC4150667.1"
                     /translation="MKHAPIILLLTASSAALLSAGCTALPSDRPPLRTLPKSAPIQPA
                     NPYSRPPSGTPDGAFSTRASNGRVLKSIVKNGVFDRFVDIYHPNGKLHSHTPVENGVA
                     QGYTEQGILRTRILYRDGHIVRAQTLDASGKVEREWQP"
     gene            complement(32476..32568)
                     /locus_tag="ACFJCW_000429"
     CDS             complement(32476..32568)
                     /locus_tag="ACFJCW_000429"
                     /inference="COORDINATES: protein motif:HMM:NF028261.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HFC4150668.1"
                     /translation="MSTSAIVMMVAAIAVIWGGLLLSLLRLPEE"
     gene            complement(32565..34100)
                     /locus_tag="ACFJCW_000430"
     CDS             complement(32565..34100)
                     /locus_tag="ACFJCW_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC4150669.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIIGGRLPELRRHLNALSSIRVGGLWTACVVFTVVMLGYMLYQ
                     DTAGLLEKNYGDYPDGFLNIFGWGMSAALIMFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     GEK"
     gene            complement(34757..36391)
                     /gene="groL"
                     /locus_tag="ACFJCW_000431"
     CDS             complement(34757..36391)
                     /gene="groL"
                     /locus_tag="ACFJCW_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HFC4150670.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAGLDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLDDLGQAKRIEIGKENTTVID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIGMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEEKPAVPDMGGMGGMGGMM"
     gene            complement(36484..36774)
                     /locus_tag="ACFJCW_000432"
     CDS             complement(36484..36774)
                     /locus_tag="ACFJCW_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HFC4150671.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
BASE COUNT         8766 a        10461 c         9761 g         8088 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta tatagataag aagtcagtgt gccaaatatt
       61 aaaaagccct gccatcgaaa tgatggcagg gcttaattct tgcaaagcgg caatcagcgt
      121 ttgaacaggt tgccgaattt gttgttgaat ttgtccacgc ggccggtggt atcgacgatt
      181 ttttgggtgc cggtatagaa cgggtggcac agggagcaaa cctcgatgtt aaagttttct
      241 ttttccattg cggatttggt tacgaatttg ttgccgcaag agcaggtaac gttaacttcg
      301 cggtagttcg ggtgaatacc ttgtttcatt tgatttcctt tcaaaaaagc gggcataggg
      361 gatgtaccta tgcctcagac aagctcggca ttctcgctat tttctgttgt ttcgtcaaga
      421 ggatattcga taaaatgtaa aaagttcttt tgaggaaggt ttgatggaat caaaattctt
      481 tttcctgctg ctgcgttttg ccggttcggt gctgccgccg tcgcatatgc gcggcatcgg
      541 catcatcggc agacgggtgc tcggttttct ggcgcggcgg atttcgccgc atatcggacg
      601 cggggcgtat gtgtttccgg atacggtttt gggcgacggc tcgggacgcg gggcgtatgt
      661 gtttccggat acggttttgg gcgacggctc gggcatcggg gcaaactgtg aaatctgccg
      721 tgggctggtg gtcggcaaaa atgtgatgat ggggccggaa tgcctgctct attcgaccaa
      781 ccacaagttt gaccgtgaaa aaaacgcttt gagggctaca cggaaatccg tccgattacg
      841 ttggaggacg atgtctggcc ggggcgcagg gtgattgtga tggcgggcgt aaccgtcgga
      901 cgcggctcgg tcgtgggcgc aggcgcggta attacaaaag acattccgcc ctactctttg
      961 gcggcaggca atcctgcggt ggtaaaaaag aatctgccgg aaggttgaat gccgcctgaa
     1021 cgtgtcgggg cggatgatct gaaaaaacag gaacatcgtt tctgtttttt gcgcttcaga
     1081 cggcatcgct attgcgccag cgcggtatcg atttcttggt agagtttgcc gaaatcgggt
     1141 tctccgacgt aggttttgag aatttcgcct tttttgccga taaggacgga agtcggataa
     1201 acctgtgtgc cgaatgcctg tccgacggct ttgtccgcat cataaatgac ggtaaacggc
     1261 agtccgtagt ctttgacgta ttggcggacg ctttctatcg gatcgatggg ctgggcaacg
     1321 gcgaggactt ggaaatcttt atttttgtag tcgtttgccg ttttgatgac tttgggcatt
     1381 tcgctcacac aacccggaca ggagggaaac caaaaattaa tcagggtgac tttgccttgc
     1441 aggtcggcgt tggaaacggt ttttccgtgc aggtcgggca gggagaaggc gggcgcggtt
     1501 ttactgtcgg ggatgaggac ggtggcaagg aggatgccga tcagtgcgac ggcggcggcg
     1561 gtgagtattt ttttcattcg gacaaggctt ccagtgcgcg ggcaagggtg gcgggcaggc
     1621 tgacggtgcg ttgtgtggcg gcgtggacgg gcatcagggt gatgtcggct tctgcggcgg
     1681 ttttgccgtt tggcagtgta atcgtctggg tcagcacaat gcggcgcatg ccgggggttt
     1741 tcaggcggca tgaaaactgc aatacgtcgc cttcgacggc gggacggctg tatcggatgt
     1801 cgatgcgggc gacaatcagt atgaggcctg ccaactcgtg catcagtccg cgtttttcaa
     1861 aaaacgccca gcgcgcttcc tcgagaaatt cgaggtagcg tgcattgttg acatgaccgt
     1921 agccgtcgag atggtaattg cggacggtca gcttcatcag ttcaggttga tgggttggaa
     1981 ggcttcgcgg gcaagcggtt cgtgttcgag gtcggtgatg acggtagaaa gctggatgtc
     2041 gaaccattcg ttgaaaatgt cggcatcgag tgcgggccac tcgcgttcgt cttcgcacca
     2101 gtcggcaagt tcggcggcga aaatgtcttc gaaacgggct tcgatttcgt cccatacttc
     2161 gtcggcggtt tcgcacgggc ggacaaggta ggaattggca tcggcttgga tgtcttcgag
     2221 ggtcagtccg tcgaggtggt tgcccggcag ggtttgcagc cagttccaaa aaggttctaa
     2281 agggatgagg acgaatacgc tgcggttgac ttcgtacatg gtttttcctt tgctgtcgcg
     2341 cggtatgcgc aaaaaaggga ttatagccca atctgtagtg tcggactgtc cgttccgacg
     2401 gaagggaatg ccgtccgaac acggattttc agacggcatg gctttagggt tgtgttccag
     2461 gttgcgtttc ggcttcccct gctgcttctg cctgtgtttc ggatacggaa tcttcgtgaa
     2521 cggcgggctc tgccgcgccg gtttcggcac tttcgaccaa ttcgtcgatg tcgatgttat
     2581 cttccgtacc ttcggcaggt gttgcaccgg tctgccgtgc gcggactttc atatagaggt
     2641 cgcgcgtgta gctgtatttg tcgatggcgg cttcgtccag actgtcggtc aaatcgagca
     2701 ggccttcgcg cgtactgacg gcggcagcgg cagtcgtgcc ccagcgtccg gcaggggtat
     2761 ggaaaacgat attcttgggc ggataaacag aggtaatgcc cgtgccgagc gcgtcgcgga
     2821 cggtggacgg gcctaagacg ggcaacacga aataattgct gtttttccag ccccacgagg
     2881 caaacgtgtc gcccaaagtg tttttattgt cgggaacgcc gcccgcgccg gcaatatcaa
     2941 tgagcccgcc caaaccgaag gtggtattga tgccgacgcg gacgaggtct tcgcttgcgc
     3001 gtttgatgtc caaacgcaag atattgctgc cgaaactgac cacgtcgcgc aggttgttaa
     3061 aaaaattgga cacgccggcg cggacgggtt tcggcgtaac tttgcggtag ccgcgcgcgg
     3121 caggggcgaa aatgtagcgg tcggcttggt cgttgaattt ggaaacggcg cggttgtagc
     3181 cttcataagg gtcggcgggg cgggtttctg caaatgcagg ggcggaagcg aacccgatca
     3241 gcaggaggat ggcgtaggcg gtttttttca tgatttcagc cagtctttga tttcgtacag
     3301 ttcggacagc gcgcgcacgg attcgggaat gccggtcagc ctgacgctgc ctttgcagcc
     3361 gcgcagcact tcgagcagca gcgacacgca ggcggaatcg gcacgtttga cacctccgaa
     3421 atcgacggca atggtttctt tcagacggca ttgttgccgg aaacgcccaa atgcgtcccc
     3481 ggtcagggtt ttgacggtga tgtcgccgcc gatgtgcagt gttccgtttt tgagttctgt
     3541 atgcatagcg tttgttcgaa aaacccatac cgccctcgga cggtatggtt tgtcggttat
     3601 ttgccgccgt ttttggcttt caactcggca atcagcccgt cgatgccttt ggctttgatg
     3661 atttcgccga attggttgcg gtacacggta accaggctcg cgccttcgat ggcgacgttg
     3721 taggtacggt atttgccgcc gctttggtag gtggtaaagt ccatattgac gggcttctga
     3781 ccggggatgc cgacttcggc acggacgacg atttccttgc cgcccttatt gacgatggga
     3841 ttgtctttga cgttgacggt cgcgtttttg aatttcagca tcgtgccgga ataggtgcgg
     3901 atcagcaggg tttgaaattc tttggccaac gcttgttttt gcgcgtcgga cgcggtacgc
     3961 caagggttgc cgaccgccaa tgcggtcata cgttggaaat cgaaataggg aaccgcatag
     4021 gcttcggctt ttgggcgtgc agaagccgcg tcgccgcttt tgaggatggt caaaacctgt
     4081 gtggcgtttt ggcggatttg tcccactgcg tcggccgggg aggcaaatgc catgccgatg
     4141 ctcaaaatac cgatgcccaa tgcgctgatg aaggaggatt ttttcatgat gtctttcctg
     4201 aaaatggatg tgtatgttta ttctgcggct ttttccgcat tgccgccctc agcgtttttc
     4261 tcggcgaagc tggtcatgaa tttaccgatc aggttttcca gaaccattgc agaactggtt
     4321 acggagatgg tgtcgccggc agcaaggttt tccgtatcgc cgccctgctg cagcccgatg
     4381 tactgttcgc ccaaaagtcc cgaagtcagg atttgcgcgg aaacgtcgct gctgaactga
     4441 tacttgccgt ccaaatcaag gcgcaccctc gcctgatagg atttcgggtc aagcccgata
     4501 gcgccgacgc gcccgaccaa tacgcctgcg gatttgacgg gggcattgac cttcaaaccg
     4561 ccgatgtcgc cgaaatcggc ataaacggcg taagttttgt ccgaaccgcc gaacgccgcg
     4621 ccgcccgcca cgcggaaagc gagaaaggca accgccgccg cgccgatcag gacgaacagt
     4681 ccgacccaaa attccaatat gttctttttc attaaagttc cttgaatatc cgatgttccg
     4741 cgtttcgtct tcagacagtc tgtcaatctg taaacatcca cgcggtcaat ataaaatcga
     4801 ccgccaaaat cgtcagggcg gacgaaacca ccgtgcgcgt gctggcgcgc aaaatgcctt
     4861 ccgaagtcgg gatgcagtgg aagccctgat gcacggcaat cagcgttacc gccacgccga
     4921 acgcggcgga tttgatcaaa ccgttgatta catcgtaatg tatcgtaatg ttgttctgca
     4981 tctgcggcca gaaaataccg ctgtccaaac ccagccagct cacgccgacc aaatacgcgc
     5041 cgaaaatgcc cgcgacgttg aaaatcgaag ccaaaagcgg catagaaaac acgcccgccc
     5101 aaaaacgcgg ggcaaccaca cgggcgacgg ggttgaccgc catcacgttc atcgcttcga
     5161 gctgtccggt cgttttcatc aaaccgattt cgctggtcat cgcaccgccc gcgctgctgg
     5221 caaacagaat cgccgccaac acgggaccca gttcgcgcaa cagagaagcc gcgaccatat
     5281 agcccaaaat atcggcggat ttgaatttcg acaactgcgt atagccctgc aaacccaaaa
     5341 ccataccgac gaacagcccc gaaacggcaa caatcagcac cgacagcacg ccggcaaaat
     5401 acacttggcg cacgctcagg cgcggacggg cgaaagccgt gccggatttc gccaaaatgt
     5461 tcagcagaaa cagcgtgata ctgccgaagg attgaataag gccgagggtt ttcgccccga
     5521 cggaacggat aaaattcata aatttctata tgtaaggttc aacggtttca gacggcacct
     5581 gctcatttac ccgagcaaat cctgctgcaa cgacgtttgc gccggatagc ggtatgccac
     5641 ggggccgtct gccagcccgc cgacaaactg gcgcacccaa ggcgaatcca gttcgcgcat
     5701 ttcctgcggc gagccggaga acataatttc gccgtgcgcc aagaaaatta cctgatcgac
     5761 gatttccaaa gatttttcaa tgtcgtgcgt taccataatg ctggtcgaac gcaaggcctt
     5821 gttgacgcgg ctgatcaagt gggcaatcac gcccaaggaa atcgggtcga ggccggtaaa
     5881 cggttcgtcg tacaacataa tttcggggtc gagcgcgatt gtgcgtgcca gcgcgacgcg
     5941 gcgcgacatc ccgccggaca actcggacgg catcaggttt tccacgccgc gcagaccgac
     6001 cgcgttcaat ttcaacaaaa ccaaatcgcg aataaccgct tccggaagtt gcgtcagttc
     6061 gcgcatcgga aaagcgatat tgtcgaatac cgacaaatcg gtaaacagcg cgccgtgttg
     6121 gaacaatacg cccatacggc ggcggtgttc gtagagttcg tcagccgaaa aacccgccaa
     6181 atcccgtcct tcaatcaaaa cctgcccgga ctgcggacga atctgtcctg taatcagcct
     6241 catcagcgtg gttttgccgc tgcccgaacc gcccatcacg gcggcaaaat tgccttgcgg
     6301 aatgctgaaa ttgatgtcgt tcagaatcgg gcggtcgcca tacgcgaagg cgacgtcttt
     6361 catttcgata aagggggatg ggctcatgta cgggcggacg gtaggtttga cggcgtgtat
     6421 tttaaggctt atcgggaaga cgggcaattt tcagacggca tacggacggc aagtgttgtg
     6481 aaaatgcctt tgtcggcggc ggattgtttg ctgtggcgaa aaatgttatc tttcaaatga
     6541 taacctttat cagaaaacta tggaaaaagc agaacatttg aacagcagcc ggttcgtcaa
     6601 tctggtcaaa agcggcggcg gcttatgtgg agggcagcta ccgtttcgat actttgtcca
     6661 acggcatttc catccacggc ggtacggtaa cggcacggtg cgatttttgc agcagccgcc
     6721 tcgccgaacc ttatgtgtcg ttcgtgctgt tgctggaagg gcgtttggac ttcggcatca
     6781 accgccgccg cttccgcatc gatgcggacg gcggcaagat tgtcctaatt gccgtcgggg
     6841 aagaagtcct gttcagccgc tatctttatc gcggcggcaa aacggtcaaa atgaccatta
     6901 aaggtatgga acaatggctg ccgcgtccgg aatacgcgcg tttcgcaccc ctgctttacc
     6961 gcgaaccggt caggatatgg gatttgcccc caaacctgcg cggcttggcg gcatcctgcc
     7021 tgcaaaccgt cccaaagggg catttgggcg aaacattgcg ccgcgaggcg gacgtgttgc
     7081 ggctgctgtc ggatttgtgg gacacggttt cagacggcat cgagccggcg gcggggcaaa
     7141 cggcggaagc agacgctatg ccgtctgaag acttcagccg caccctgaat gccgcgttcg
     7201 acggcggcgc acaccaagtc aaccggctga cagccgcgct gaacatcagc gaaaggacgc
     7261 tgcaacgccg tatgcgcgac catttcggca ttacggcaag cgagtggctg caccacaaac
     7321 aaatgcagca cgcgctctat ctgttgcaaa acgggggcaa aaacgtgggc gaaaccgcgt
     7381 atttgtgcgg ctagcgccac gtttccagct ttattcaggc attcaggcaa tatttcggca
     7441 gcacgcctgc ggaaactaaa aaagaaaacc ggtaagccgt atttgacttg aaacccaaaa
     7501 tccgcgtgta aagaaacttg tacggtaatt tatttgggaa taaaccaaaa ctacatccga
     7561 ctacaaaact ggagggcccg aaatgaaaca attggccatg tacatcaacg gacgctttga
     7621 aaacgatttc aacggcgaat ggcgcgacgt attgaacccg tccaccgaag aaaccatcgc
     7681 ccgcgaaccc aaaggcggca gggcggacgt tgaccgcggc gcgcgcggcg caaccggctt
     7741 gggagcgtct gcctgcggtc gaacgcggcg cgtatttgcg taaaatcgcc caaggcatac
     7801 gcggacgcgc cgacgagctg accgacacca tcgttgccga aggcggcaaa accaaagact
     7861 tggcgcgtgt ggaagtgatg ttcactgccg actatctcga ttaccaagcc gaatgggcgc
     7921 gccgttacga aggcgaaatc atccaaagcg accgcccgcg cgaaaacatt ttatcgttca
     7981 aacgtccgct gggcgtgatt gccggcattt tgccgcggaa cttccccttc ttcctgatcg
     8041 cccgcaaaat gggcccggat ctggttacgg gcaacaccat cgtcgtcaaa cccagcagcg
     8101 taaccccgat caactgccac atcttcgccg aaatcatcga tgcggtcgga ctgcccgcag
     8161 gcatgttcaa cgtggtggac ggtccgggtg cggaaatcgg caacgccttg tccgcccatc
     8221 cgcaagtcga tatggtcagc ctgaccggct cggttgaagc gggtcgccaa gtgatggaag
     8281 ccgcttccgc caacatcacc aaagtctcgc tggaactcgg cggcaaagcc cccgccatcg
     8341 tgttgaaaga cgcggatttg gatttagcgg tgaaatccat cttggcttcg cgcgtcggca
     8401 acaccggtca aatctgcaac tgcgccgagc gcgtctatgt ccacagcagc ctgaaagacg
     8461 cgttcattga aaaaatgacc gccgcgatga aaggcgtgcg ctacggcaac cctgccgaag
     8521 ccgaagcagg cgcgccggaa atgggcacgc tgattgaaga gcgcgccgtc aaagccgttg
     8581 ccgaaaaagt ggaacgggcc gtcaaacaag gtgcgaaatt ggtttgcggc ggcaaacgca
     8641 ccgaaggacg cggctatttc ttcgagccta ccctgctgac cgacaccgac aacagtatgg
     8701 acattatgaa agaagaaact ttcggcctcg tgctgcccgt ttccgctttc gacacgctcg
     8761 accaggtcat cgccctggca aacgactgcg aattcggtct gaccagctcc gtgtacacca
     8821 ccaacctgaa cgaagccttc tacgttaccc gccgcctgca attcggcgaa acctacatca
     8881 accgcgaaaa cttcgaagcc atgcagggct tccacgcggg ctgggaaaaa tccggcatcg
     8941 gcggcgcgga cggcaaacac ggtttggaag aatacctgca aacccaagtc atttatctgg
     9001 aaaccgacat ctgatgccgg tttgacacac ggatagaaaa tgccgtctga acctgaaatc
     9061 gggttcagac ggcattttta ttacttcacc ggcaatcagt catgaccgac atcgatggtt
     9121 ttctctttgt aacgcgtatc gggaacaaga acgattttat cgtccacttt gccgatggct
     9181 ttcacgtctt tacccgggta gtccaactgg tgcaggaagt agcggataca gttcaaacgg
     9241 gcgcgttttt tgtcgtccga acggatgatg acccaaggcg cgtcgccggt gtgggtgtgg
     9301 aagaacatcg cgtttttggc ttcggtgtag tcgtcccagc ggtcgagcga ctggatgtcc
     9361 acgggggaaa gtttccagtg tttcagggcg tcgtcgcggc gggagatgaa gcggcgcagt
     9421 tgttcttcgc gggatacgga gaaccagaat ttgaacaggt ggatgccgct ggcgacaagc
     9481 atacgttcca actcaggggc ttggcgcata aagagcatat acttcgttgg gttcgcagaa
     9541 gcccgtcacg cgttccacgc cggcgcggtt gtaccacgag cggtcgaaga ataccatttc
     9601 gcccgcagtc ggcaggtttt ggatgtagcg ttggaaatac cattgtccgc gttcggtgtc
     9661 agtcggtttc tccaaagcga ccacgcgcgc gccgcgcggg tttaaatgtt ccataaagcg
     9721 tttgatggcg ccgcccttgc ctgccgcgtc gcggccttca aacaggctga cgatgcgctg
     9781 gccggaatct ttgacccagc tttgcacttt cagcaattcg atttgcagtt tggctttttc
     9841 ggcttcgtag gcggcgcgga gcatacgttt gcggcagggg tagttttcgg gcagcggggc
     9901 cgtgccggaa tcttcggcag aacctttgcc ttcatgttcc aaaacagctt tttcaaatac
     9961 ctggagctgg tcttgctttt cgcctaattc tacgttttca aacggttgca actggcggtc
    10021 tgccataaag gtctcctatt gtatttcagg ttggaaatga aagtccgttt tcacaatttt
    10081 acactttcgc caccgctttc tctacataaa attacatttt gcccgaattt gccccgccgt
    10141 ctggaaatcc gtgtaaaagg ggcgtataat caaaacattt gccccgaatt gccatgcctt
    10201 atttcgccct gtttgacgat gccgtaagcg gccgcgcaaa actctatcaa aatcatgtgg
    10261 aaagccgttt tttccgtccc gaagaactcg atgctttaga cggcgcgctg caatcgggat
    10321 ggcaaaaagg gctgcattcg gtgttgtttg cagactacga attcggtttg ccgctgatgg
    10381 ggatggaatc cgaacgcggc ggcaacattg ccctgcactg gtttgccgac tgcgccgaca
    10441 ccgatgccga aagctggctt gcccgacatt cagacggcat ccccgccggt atttccacgc
    10501 cgcaatcctc cgtatccgaa accgattacc tcgaccgcat ccgccaaatc cacgaagcca
    10561 tccggcgcgg cgacacctat caaatcaact acaccacccg cctgcacctg caagcctacg
    10621 gcaaccccgt cagcctctac cgccgcctgc gccagcccgt cccctatgcc gtattgtccc
    10681 acctgcccga tgaagccggg caatccgcgt ggacgctgtg tttctcgccc gaactcttcc
    10741 tcaacatcgc ttcagacggc atcatcagca ccgaaccgat gaaaggcacc gcgccgattt
    10801 tgggcgacgg acaagacgaa cgccgcgccg ccgagttgca agcagacccg aaaaaccgcg
    10861 ccgaaaacgt gatgattgtc gatttgctgc gcaacgacct cggcaaaatc gcccaaaccg
    10921 gtaaagtatg cgtacccgag ccgtttaaag tatcgcgttt cggcagcgtc tggcagatga
    10981 ccagcaccat ccgggcgcaa gccctgccgg acacctcgtt cgccgacacc ctccgcgccg
    11041 ccttcccctg cggcagcatc accggcgcgc ccaaaaaaat gagtatgcag attatcgaat
    11101 cgctcgaaac cgaagcgcgc gggctttata cgggcagcat cggctatttg aacccgtgtt
    11161 ccggcggctt ggggtttgaa ggcgcgttca acgtcgtcat ccgcaccctg tcgctcaaac
    11221 ccgtttcaga cggcattgtt tcaggcatcg gcggcacgga ttcaaacgcg caagcccgaa
    11281 cggcaggaca aggcggggaa acgccgcatc cgtttgaagc caatccgccg tatcggggcg
    11341 tgtacggtgt cggttccggc atcgtcatcg acagcgaccc cgccgccgaa tatcgcgaat
    11401 gcggctggaa agcccgattc ctcaacgaac tgcgccccga tttcggcatt tttgaaaccc
    11461 tgcgcgcgga aaacaggcaa tgcgccctgc tcgaccgcca cctatgccgt ctgaaaacct
    11521 ccgcccaagc cctcaacctg cccctgcccg acggctgcga aaatcaaatc aaacaataca
    11581 ttgccgactt gcccgacggc gcgttccgca tcaaagccct gctcgcttca gacggcatca
    11641 gcctgtccca cgccgtttta aaccgtctga ccgacaaaca gcgcgtcatc atttcgccga
    11701 ccatcctgcc cgcacaaaac tacctgcgcc gcttcaaaac cacacaccgc gccatcttcg
    11761 accaagcgtg gcaaaccgcc gaaacgcaag gcgcgttcga cagcctgttt ttcaattcgg
    11821 acggcatcct actcgaaggc ggcaggagca acgtgttcgt caaacatcgc ggacaatggc
    11881 tcacgccctc tttagattta gacattttaa acggcataat gcgccaagcc gtgtcggacg
    11941 aaccgcaaaa atatttgcac acaaatcaag tgattgaaac acacatcaca caaaaaacac
    12001 tgcaaggggc cgaagaaatc cgcctctcca acgccttgcg cggcgtattt gccgccgtcc
    12061 ttgcctgaac gcgcaaaaat gccgtccgaa cctgctgccg caaagttcgg acggcattat
    12121 cccaccattc aaaaccgcca atccgccgac acaaacacct cgctgttgcg gcgttttgca
    12181 tacggcacat tgctttccgt cttaccgaag cggtagttca acgtcggcac gatgcctttg
    12241 tacgacaact tgtcgtggct caaagccagc gagacattcc attcgcggtt acgctgcgcc
    12301 tccgtcgaaa atgccgcaat gcctttgtag ttgcggtggg cgtaagacgc ggcaatccgg
    12361 ctgttcaaac cgcccgtccc gccccactcc tgcgcccaac cgatatggac ggcgttgcgg
    12421 cggtaggcgg cattgttgac cgcgccgccc accgtttcgc gtttcggcac aaaccgcgca
    12481 aactgccagc cgccgaacac ggttgccgag ccgcccaacc gccttgccag cgacacataa
    12541 agcccgtcct gccaaccgtc gttgcgttcc gcccggcctt gttcgcggta gcgttggcgg
    12601 taacgttcca gcgacaccga aagctgcgac cggcggctca ggcggtaaga atgcgccaac
    12661 tgcacacccg ccccgtgcgc cagcatatac ggcgcaagcc ggcggtcggc aggcggtttc
    12721 gttttcgcat caaagccgtc gctacccgac aattgcgcct gataaaacgg caaaaccccc
    12781 accgtctgcc gcgcattttt atactgccag cccaaataag ccctgccgaa agcatcgtca
    12841 taagccgatt tgcggctgaa ataatagctt gtgcccccga cattggcgcg gaacagcaga
    12901 taatggttgt ccgccagcgc agtcagcttt tccgccccgg cctcataatc caaccctgcc
    12961 gcacggacag gtccggtaac gctgcatatc cggctgccgc cgccctgcag gcagtattgc
    13021 ggcgcggcat tgttggcgtt tttgttcaca gaagggctga tgccgcccga aaaatgccag
    13081 cccgtcagcc cctccgtttt tttccggaaa cgccccacat tttccaaaac cggcgccggc
    13141 aaatccaatt ttgccgcctc cgcaaaatgc agccctgccg acttcagccg gaaatcgtca
    13201 aactccgccg ccgccaaatc cagcaaaacc cgctcgtctg ccgcattatc cctgtgcaac
    13261 gcccgatagc gcgccaccgc ctccgccggc cttcccgcca atttcgccag caaagcccgc
    13321 gccctgccgt acaacaccgc atcataatcc ggcagcttgg catacaaatc cgccaacgaa
    13381 gcgatcaaat ccgcctgatt gccgttgagc gcgtcgcgca aaacgtgttc caacaactgc
    13441 gggcgcgaca gcaggaaatc cccgtcgatt acgcgcgaac cgccgtttgc ggcagaatcc
    13501 ccttccggcg gcattcccgc ccaaccctcc gcagccgcac gctgggcgcg caacgccgcc
    13561 gcatcgtccc gaacgtcggg caagccggcg gcatacgcgc cgaccgcacc ccaaacacac
    13621 agcgcggcac acagccggca tacccgatac acactatcct tcaatttgcc ttccttaaaa
    13681 aacaccgccg gacggcggcg gcagaaacgc cgcaagcccc acgcgcggcg gacgcggcgc
    13741 atcatatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata
    13801 gtacggcaag gcgaggcaac gccgtaccgg tttttgttaa tccgctataa aaaacaaagg
    13861 tagaaacgcg gcagacaaac gcaggcacgt ccgatttccg cgccgcccca taaaacagtt
    13921 gacatcatat aacatttaaa ctgataatca aaactattat taacacatca tcaagattga
    13981 gtatgcgatg aaatacaaag ccctgtcctt actgccgctt gccgccgccc ttgccgcctg
    14041 tgccgggggg gggggtagcc gaaccgcacg tccccgtgtc catccccacc gccacgccgc
    14101 tgcccgccgg cgaggtaacg ttatcaagcg ataacggcaa tatcgaaaac atcaacaccg
    14161 ccggcgccgg aagcgcatcc gacgcgccga gccgcagcag acgctcgctc gatgccgccc
    14221 cgcaaaacac atccggcatt tccattcggc agcgggaagt agaaaaagac tatttcggct
    14281 ataaatcaaa agaaacatca ttcatcttca aaacacccgg cggcgcgcaa tacgcccttt
    14341 catcctacgc cgaccccata accgtcagct actcctcccc cgatttcaaa attcccgacc
    14401 gccacgcagg gcagcggctc gccgacggca gccgcatctt tatctgctgc agcgactccg
    14461 gggctacttc gtatgcggaa attaccaaac aagattatat gaaattcggg gcgtggatag
    14521 gtcccaacgg cgaaatcgac ctcttcgccg gcggcttccc cgtcggcaaa acgccgcctc
    14581 ctgcgttctc ctacggcagc agcacgcccg aaaccgcatt gtcaaagggt aaaatcactt
    14641 atcaggtttg gggcatccgc gtcagaaacg ggcaatttgt tacttcctct tatacgccgc
    14701 cgaaaagcgg ttcttattat gggacacttg ccaatacccc cgtcctttcc tttatcaccg
    14761 ccaatttcaa cagcaacaca ctggcaggca aaatcctcgg caacagcgat tacgggccgg
    14821 atgtggatat tcaaaacgca acgattaccg gtccgacctt ttccggcgat gccacgtccg
    14881 gcgggaaaag cggcaaattg gaaggcaagt tttttggcaa gttcgccagc acccgcagca
    14941 gcgaagtcag cataggcggc aaaatcacct ttgacggcga ccgctccctc gataccgtat
    15001 tcggcggtgt gagttatgaa aaaaaacttg atgacaccag tcaagatacc aaccacctta
    15061 ctaaacaata aaccacctca tccctgcaaa ggtttcttat gcccattccc ttcaaacccg
    15121 tattggctgc cgccgccatc gcccaagcgt ttcccgcctt tgcggcagac cccgcgccgc
    15181 agtccgccca aacgctgaac gaaatcaccg ttaccggcac gcacaaaacc caaaaactcg
    15241 gcgaagaaaa aatccgccgc aaaaccttag acaagctctt ggccaacgac gaacacgacc
    15301 tggtgcgcta cgaccccggc atttccgtcg tcgaaggcgg cagggcgggt tctaacggct
    15361 ttaccatacg cggcgtggac aaagaccgcg tcgccatcaa cgttgacggg ctggcgcagg
    15421 cggaaagccg ctcttccgaa gccttccaag aattgttcgg cgcgtacggc aacttcaacg
    15481 ccaaccgcaa cacttccgag ccggaaaact tttccgaagt aaccatcacc aaaggcgcgg
    15541 actcgctcaa atccggcagc ggcgcattgg gcggcgcagt caattaccaa accaaatccg
    15601 caagcgacta tgtttccgaa gacaagccct accatttggg gataaagggc ggcagcgtcg
    15661 gcaaaaacag ccaaaaattc agcagcatta ccgccgccgg caggctcttt ggtttggatg
    15721 ccttattggt ttatacccgc cgcttcggca aagaaaccaa aaaccgctcg accgagggcg
    15781 atgtcgaaat taaaaacgac ggatatgtct ttgacccggc caacccctcg cccagcagat
    15841 accttaccta caaagccaca ggggttgctc gctcccaacc cgacccgcaa gaatgggtaa
    15901 acaaaagcac cctgttcaag ctgggctaca atttcaacga ccgcaaccgc atcggctgga
    15961 tttttgaaga ctcgcgcacc gaccgtttta ccaacgagct gtctaatttg tggacgggta
    16021 cgaccacgtc tgccgcaacg ggcgactacc gccaccgcca agacgtgagc taccgccgcc
    16081 gcaccggcgt cgaatacaaa aacgaattgg aacacggccc gtgggacagc ctcaagctgc
    16141 gctacgacaa gcagcgcatc gatatgaaca cttggacttg ggacatcccg aaaaattacg
    16201 atacaaacgg catcaacggc gaggtttacc attcgttccg gcatatccgc caaaacaccg
    16261 cgcaatggac tgccgatttt gaaaaacaac tcgacttttc caaagccgtt tgggcggcgc
    16321 aatacggctt aggcggcggc agaggggaca atgccaactc ggattacagt tatttcgcaa
    16381 aactgtacga ccccaaaatc ctcgcttcca accaagccaa aatcacgatg ctgatcgaaa
    16441 accggtcgaa atataaattt gcctattgga acaatgtgtt tcacttgggc ggcaacgacc
    16501 gcttccgcct gaatgcgggc atacgctacg acaaaaacag cagcagcgcg aaagacgatc
    16561 cgaaatacac caccgccatc cgggggcaga ttccccattt gggttcggaa cgcgcgcacg
    16621 cgggcttcag ctacggcaca gggttcgact ggcggtttac caagcatctg cacttgttgg
    16681 caaaatacag caccggcttc cgcgcaccga cttcggacga aacctggctg ctgttcccac
    16741 accccgattt ctacctgaaa accaatcccg aactgaaagc ggaaaaagcc aaaaactggg
    16801 aattgggcct ggcgggcagc ggcaaagctg gcagcttcaa gctttcgggc ttcaaaacca
    16861 aataccgcga ctttatcgaa ttgacgtata tgggcgtttc gtcagacgat aaaaacaacc
    16921 ccagatacgc cccgctttca gacggcacgg cattggtcag ctcgcccgtt tggcaaaacc
    16981 aaaaccgcac cgccgcctgg gtgaaaggca tagagtttaa cggcacttgg aacctcgaca
    17041 gcatcgggct gcccaaaggg ctgcacaccg gcctcaacgt cagctacatc aagggcaagg
    17101 caacgcaaaa caacggcaaa gaaacgccca tcaacgcgct ttcgccgtgg acggcggttt
    17161 acagcctggg ctatgacgcg ccttccaaac gctggggcgt caacgcctac gccgcgcgca
    17221 ccgccgccaa aaagccgtcc gacaccgtcc acagcaacga cgacttgaac aaaccgtggc
    17281 cttatgccaa acacagcaag gcctatacgc tgttcgacct ttccgcctac ctcaacatcg
    17341 gcaaacaggt tacgctccgc gccgccgcgt acaacattac caacaagcag tactacactt
    17401 gggaatcttt acgcagcgtc cgcgagttcg gcacggtcaa ccgcgtcaac aacaaaaccc
    17461 acgccggcat ccaacgcttt acctcgccgg gcaggagcta caatttcacc atcgaagcga
    17521 agttctaagc tcctgatgtg ccaatgccgt ctgaaacccg atgatttggg tttcagacgg
    17581 cattttttac ggtcgcaccg ccgccccctt tcaggcttgt accaagccca atcccgcaac
    17641 tctccgtcat tcccgcaact ctccgtcatt cccagggaag tgggaatcta gaaacgcaaa
    17701 gccacaggaa cttatccgaa acaacagcaa cctaaaattc gtcattccca cgaaagtggg
    17761 aatccagttc gttgagtttc agttatttaa aataaatttt gaaactttaa tcccatcatt
    17821 cccgcgaaag cgggaatccg gaacgtaaaa tctaaagaaa ccgttttatc cgataagttt
    17881 ccgtaccgac ggggctggat tcccgcctgc gcgggaatga cggcggagcg gtttctgttt
    17941 tttccgataa attcctaaaa cttaaaattt catcattccc acaaggacag aaaaccaaaa
    18001 acagaaacct aaaattcgtc attcccgcaa aagcgggaat ccagttcgtt gagtttcagt
    18061 tatttagaat aaattttgaa actttaatcc cgtcattccc gcgaaagcgg gaatccggaa
    18121 cgtaaaatct gaagaaaccg ttttcccgat aagtttccgt gccgacgggg ctggattccc
    18181 gcctgcgcgg gaatgacgat atttcagttt tctgtttttg atttttttgt ttttacagga
    18241 atgacggggc tttcagtatt gaaaaaagtt gccgtaccgc gccgataatt tccgcctgcg
    18301 cggaatgaag atttaagcgt tgcccgaaat tcaaaaaacc aaaaccgaac ggatcggatt
    18361 cccgttttta tgggataacg gaatgttcag ccggacaccg ccacaatgcc tccggcccgc
    18421 ttattttccg atgcaaaacc tcgaaaaaat cacgccgagc aggtcgtccg ccgtaaattc
    18481 ccccgtaatt tcgccgcacg cgacctgagc cagccgcaag tgttcggcaa acagctcgat
    18541 ttgatggttg ccgcacaaag cggccagcga caattcttcc tgcgccgcct tgagtgcgtt
    18601 gacgtgccgc gtccgcgcca aaaacagccc ttcgctttcg ccctgccaac cggcctcgca
    18661 caacagcgtc cgtttcagcg cgtccaagcc gtcgccggtt ttcgccgaca gcgcgatgac
    18721 ggtttccgcg cccgtaccga acccgcctgc cgcgtgtgcg tgcaaatcgg atttgctgtg
    18781 gatttcaatg cgtttcaaat ccgacggcaa cgtatccaaa atcatccgcg tcttttcatt
    18841 caaaccctcg cgcggatcga ccaacaccag cgcgacatcg gcttcggata cggctttgcg
    18901 gctgcgttcg atgccgatgc gttcgaccac gtcgtccgtc tcgcgcaaac ctgccgtatc
    18961 gacaatatgc accggcacgc cgtcaatcag gatacgttcc ctgaccgcgt cgcgcgtcgt
    19021 tccggcaata tcggtaacaa tcgccacttc gtcgcccgcc agcgcgttca acaggctgga
    19081 cttgccgaca ttcggcgcac cgaccaatac gacattcaga ccttcgcgta aaatcgcgcc
    19141 ctgctgcgcg ttggcaagca catcatccac ggcgcggcgc aagccgtcca gtttgccgcg
    19201 tgcgtccgcc gcttcgagaa aatcgatgtc ttcctcggga aaatccagcg ccgcttcgac
    19261 cagcatccgc aaggtaatca agccttcgac caaaccgtgt atccgccgcg aaaaatcgcc
    19321 cttgagcgag cgcaacgcca gacgcgccgc cgaacggccg gatgcgtcaa tcaaatccgc
    19381 cacgccttcc gcctgtgcca agtccagttt gtcgtttaaa aacgcacgtt tggtaaactc
    19441 gcccggctcg gcaaggcgcg cgcccagttc caaacagcgg ttcagcagca tctccatcac
    19501 taccggcccg ccgtgtccct gaagctcgat gacatcttcg cccgtaaaac ttgccggcgc
    19561 ggcaaaaaac agtagcagcc cgctatcgat tgcctgtccg tccgcgtccg taaaatcagc
    19621 ataggttgcc acgcgcggct cgggcgtttt cccacacaaa gcctgcgcca tcggcaacag
    19681 gtttttcccc gatatgcgta tcacgcccac gccgccgcgt ccgggcgcgg tcgcgactgc
    19741 cgcaatcgtt ggaacgttat ccgacataaa acccccgaaa attcaaaaca gccgcgatta
    19801 tagcaaatgc cgtctgaagt ccgacggttc ggctttcaga tggcattgcc ggcttgtgta
    19861 aaacgatatt ccgacaccgc acggcacaaa accctgcccc gcattccgcc tccggtcggt
    19921 ttttaccgcc gaaaacggcg gggttccgac cgaaaaggaa cggggataaa gtaaagtgtg
    19981 atatgatttc gtattcaaaa tgatgccttt atgtgcaacc catcgattgc tccggcgagt
    20041 tgataaaaat cccctttttt tccttcccgc ccttccctgc accatctccg aacagaagcg
    20101 gcaaaatacg ccgaaccgca catatagcca catcccgcgc gccgcccgga agcggaagcc
    20161 gcgccctccc aaacaaaccg aatcccgtca gataaggaaa aataatgaaa acaaccgaca
    20221 aacggacaac cgaaacacac cgcaaagccc ctaaaaccgg ccgcatccgc ttctcgcccg
    20281 cttacttagc catatgcctg tcgttcggca ttctgcccca agcccgggcg ggacacactt
    20341 atttcggcat caactaccaa tactatcgcg actttgccga aaataaaggc aagtttgcag
    20401 tcggggcgaa agatattgag gtttacaaca aaaaagggga gttggtcggc aaatcgatga
    20461 cgaaagcccc gatgattgat ttttctgtgg tatcgcgtaa cggcgtggcg gcattggcgg
    20521 gcgatcaata tattgtgagc gtggcacata acggcggcta taacaatgtt gattttggtg
    20581 cggagggaag caatcccgat cagcaccgct tttcttacca aattgtgaaa agaaataatt
    20641 ataaagcagg gactaacggc catccttatg gcggcgatta tcatatgccg cgtttgcaca
    20701 aatttgtcac agatgcagaa cctgttgaga tgaccagtta tatggatggg tggaaatacg
    20761 ctgatttaaa taaataccct gatcgtgttc gaatcggagc aggcagacaa tattggcggt
    20821 ctgatgaaga cgaacccaat aaccgcgaaa gttcatatca tattgcaagc gcatattctt
    20881 ggctcgtcgg tggcaatacc tttgcacaaa atggatcagg tggtggcaca gtcaacttag
    20941 gtagcgaaaa aattaaacat agcccatatg gttttttacc aacaggaggc tcatttggcg
    21001 acagtggctc accaatgttt atctatgatg cccaaaagca aaagtggtta attaatgggg
    21061 tattgcaaac aggcaacccc tatataggaa aaagcaatgg cttccagcta gttcgtaaag
    21121 attggttcta tgatgaaatc tttgctggag atacccattc agtattctac gaaccacatc
    21181 aaaatgggaa atactttttt aacgacaata ataatggcgc aggaaaaatc gatgccaaac
    21241 ataaacacta ttctctacct tatagattaa aaacacgaac cgttcaattg tttaatgttt
    21301 ctttatccga gacagcaaga gaacctgttt atcatgctgc aggtggggtc aacagttatc
    21361 gacccagact gaataatgga gaaaatattt cctttattga caaaggaaaa ggtgaattga
    21421 tacttaccag caacatcaac caaggcgcgg gcggtttgta ttttgagggt aattttacgg
    21481 tctcgcctaa aaacaacgaa acgtggcaag gcgcgggcgt tcatatcagt gatggcagta
    21541 ccgttacttg gaaagtaaac ggcgtggcaa acgaccgcct gtccaaaatc ggcaaaggca
    21601 cgctgctggt tcaagccaaa ggggaaaacc aaggctcggt cagcgtgggc gacggtaaag
    21661 tcatcttaga tcagcaggcg gacgatcaag gcaaaaaaca agcctttagt gaaatcggct
    21721 tggtcagcgg cagggggacg gtgcaactga atgccgataa tcagttcaac cccgacaaac
    21781 tctatttcgg ctttcgcggc ggacgtttgg atttgaacgg gcattcgctt tcgttccacc
    21841 gcattcaaaa taccgatgaa ggggcgatga ttgtcaacca caatcaagac aaagaatcca
    21901 ccgttaccat tacaggcaat aaagatatta ctacaaccgg caataacaac aacttggata
    21961 gcaaaaaaga aattgcctac aacggttggt ttggcgagaa agatgcaacc aaaacgaacg
    22021 ggcggctcaa tctgaattac caaccggaag aagcggatcg cactttactg ctttccggcg
    22081 gaacaaattt aaacggcaat atcacgcaaa caaacggcaa actgtttttc agcggcagac
    22141 cgacaccgca cgcctacaat catttaggaa gcgggtggtc aaaaatggaa ggtatcccac
    22201 aaggagaaat cgtgtgggac aacgattgga tcgaccgcac atttaaagcg gaaaacttcc
    22261 atattcaggg cggacaagcg gtggtttccc gcaatgttgc caaagtggaa ggcgattggc
    22321 atttaagcaa tcacgcccaa gcagttttcg gtgtcgcacc gcatcaaagc cacacaatct
    22381 gtacacgttc ggactggacg ggtctgacaa gttgtaccga aaaaaccatt accgacgata
    22441 aagtgattgc ttcattgagc aagaccgaca tcagaggcaa tgtcagcctt gccgatcacg
    22501 ctcatttaaa tctcacagga cttgccacac tcaacggcaa tcttagtgca ggcggagaca
    22561 cgcactatac ggttacgcgc aacgccaccc aaaacggcaa cctcagcctc gtgggcaatg
    22621 cccaagcaac atttaatcaa gccacattaa acggcaacac atcggcttcg gacaatgctt
    22681 catttaatct aagcaacaac gccgtacaaa acggcagtct gacgctttcc gacaacgcta
    22741 aggcaaacgt aagccattcc gcactcaacg gcaatgtctc cctagccgat aaggcagtat
    22801 tccattttga aaacagccgc tttaccggaa aaatcagcgg cggcaaggat acggcattac
    22861 acttaaaaga cagcgaatgg acgctgccgt cgggcacgga attaggcaat ttaaaccttg
    22921 acaacgccac cattacactc aattccgcct atcgacacga tgcggcaggc gcgcaaaccg
    22981 gcagtgcggc agatgcgccg cgccgccgtt cgcgccgttc cctattatcc gttacgccgc
    23041 caacttcggc agaatcccgt ttcaacacgc tgacggtaaa cggcaaattg aacggtcagg
    23101 gaacattccg ctttatgtcg gaactcttcg gctaccgcag cggcaaattg aagctggcgg
    23161 aaagttccga aggcacttac accttggctg tcaacaatac cggcaacgaa cccgtaagtc
    23221 tcgagcaatt gacggtagtg gaaggaaaag acaacacacc gctgtccgaa aatcttaatt
    23281 tcaccctgca aaacgaacac gtcgatgccg gcgcatggcg ttatcagctt atccgcaaag
    23341 acggcgagtt ccgcctgcat aatccggtca aagaacaaga gctttccgac aaactcggca
    23401 aggcgggaga aacagaggcc gccttgacgg caaaacaggc acaacttgcc gccaaacaac
    23461 aggcggaaaa agacaacgcg caaagccttg acgcgctgat tgcggccggg cgcgatgcca
    23521 ccgaaaaggc agaaagcgtt gccgaaccgg cccggcaggc aggcggggaa aatgccggca
    23581 ttatgcaggc ggaggaagag aaaaaacggg tgcaggcgga taaagacacc gccttggcga
    23641 aacagcgcga agcggaaacc cggccggcta ccaccgcctt cccccgcgcc cgccgcgccc
    23701 gccgggattt gccgcaaccg caaccccaac cgcagcgcga cctgatcagc cgttatgcca
    23761 atagcggttt gagtgaattt tccgccacgc tcaacagcgt tttcgccgta caggacgaat
    23821 tggaccgcgt gtttgccgaa gaccgccgca acgccgtttg gacaagcggc atccgggaca
    23881 ccaaacacta ccgttcgcaa gatttccgcg cctaccgcca acaaaccgac ctgcgccaaa
    23941 tcggtatgca gaaaaacctc ggcagcgggc gcgtcggcat cctgttttcg cacaaccgga
    24001 ccggaaacac cttcgacgac ggcatcggca actcggcacg gcttgcccac ggtgccgttt
    24061 tcgggcaata cggcatcggc aggttcgaca tcggcatcag cgcgggcgcg ggttttagta
    24121 gcggcagcct ttcagacggc atcagaggca aaatccgccg ccgcgtgctg cattacggca
    24181 ttcaggcaag ataccgcgca ggtttcggcg gattcggcat cgaaccgcac atcggcgcaa
    24241 cgcgctattt cgtccaaaaa gcggattacc gatacgaaaa cgtcaatatc gccaccccgg
    24301 gccttgcatt caaccgctac cgcgcgggca ttaaggcaga ttattcattc aaaccggcgc
    24361 aacacatttc catcacgcct tatttgagcc tgtcctatac cgatgccgct tccggcaaag
    24421 tccgaacgcg cgtcaatacc gccgtattgg cgcaggattt cggcaaaacc cgcagtgcgg
    24481 aatggggcgt aaacgccgaa atcaaaggtt tcacgctgtc cctccacgct gccgccgcca
    24541 aggggccgca attggaagcg cagcacagcg cgggcatcaa attaggctac cgctggtaac
    24601 cgccggatat gccgaaaggg gtttgacgat gccgccgtgc actgtcaaac ccctttttct
    24661 gccaccttgt gcctactcca tcgtctgata accgtcaaat tgatttttag cccatgttcg
    24721 gcgagtcggg gaaatctata gtggattaaa tttaaatcag gacaaggcgg cgaagccgca
    24781 gacagtaaaa atagtacggc aaggcgaggc aacgccgtac cggtttaaat ttaatccact
    24841 atatatcttc gtccgcgccg aaatagtcta tgcccgatat acaattttga tacacaaact
    24901 tggaaatatc ggtatcgtcg ccggtgcgat agaatgcgga tagtttttca ttgaatcgcg
    24961 gcatctgcat ttcggagatt tccaggatac cgcagccccc cgccatcatc aggccgttgg
    25021 caaatagggt tgccgtccgt ttgttgccgt cccaaaaaac ctgctgccgc atacaataga
    25081 gcatgaaacg aacggctgct tccgtcgtcg aaccgctttg cagtccgata ttttgcaaca
    25141 cgcgggccac ttcaatttcc ttcaccggat tcggggcatg acgggaaccg tccaatagcg
    25201 ttacgccgac cgaaccggta cggaaatcca cgggtaccaa agaatcgtcc ttggcaacaa
    25261 tgttgttgat tcttttaagg agtgaaatat tgaccggttc gccgtttgaa atatgcgaaa
    25321 tcacatattg ataggcacgt ttcaggttca agatggtttg gatgtcttcc agtgacgcgg
    25381 aggctacatt tttgccattg ataatttgct cggtctgcaa caaggtcgtc tgacaattct
    25441 caaaacggct gaggttgtga atttgagcaa ccaatacttt ctttgccaga aaaatatttt
    25501 cttccaaact caacttgtat ttgtcgggaa acacgataat tccttaaata attaaagcag
    25561 tacgttaaat catcatctta tcatcacttt cggggtttat gttgcgtgcg tccgttttct
    25621 aatacggttt cccatcccgc gaaacgcggc ggaagcctgt gcaaaaaacc tgttcacgaa
    25681 attttccgca taaagatacg ctgaaaatgc gctaaaaatg gctgtgtttg aatatcggtt
    25741 gatttcatcc gtttgtgtaa cctcgcgccg gttttgtcat gattttgcat tatttttgtt
    25801 atgcggatat ttcacgggat gacaaaacgg gcgcaaaaaa gcccgattgg aaaatccgaa
    25861 tcaggctttt ttgtgatgtt ctgttcgatt tgtgcgctaa ctgccgaccg gagcgtccgc
    25921 gcccggtttg gcaggtcgga ttctcgaatc cgactgctat ttgagatggc aggcttttgt
    25981 cggatacaag tatccgacct acggcttgct attgatttcc aatcattcga atcgggtatt
    26041 ttacttcctt aaattttgat aaatcaaaac gtaacagttc aatacttgtg cattctcaat
    26101 gtgcctcttc ccaattctcc cctacgccaa cctcagccac cagcggtaca tccaataatc
    26161 cgccgtccac tttcgccata atctgcggca gtttttcttt gacaaaatcc agttcggttt
    26221 caacgacttc cagcaccagt tcgtcatgca cctgcatgac cagtttgctg ccgatgccgt
    26281 ctgaaagcca gtttcgcacg tttatcatgg cgcgtttgat gaggtcggaa gcggtgcctt
    26341 gcatgggggc gttgatggcg gcacgctcgg ctcctgcgcg ggcgttggcg tttttgttgc
    26401 ggatgtcggg caaatagagc cttctgccga acagggtttc gacgtagcct tgggcggcgg
    26461 cttgttcttt ggtgcgctgc atgtattcgg cgacgccggg ataacgggcg aagtagcggt
    26521 cgataaagtt tttggcggaa aggttgtcga tgcccaatga ttttgccaaa ccgtattgcc
    26581 ccataccgta gattaagccg aagttgatgg ttttggcgta gcggcgttgc tcgggcgaga
    26641 cgttttcggg cgcagtgccg aacacttcgg cggcggtgcg gcggtgtacg tcttcgccgc
    26701 tttgaaatgc ggcaatgagg gttttgtcac cggagaggtg cgccataatg cgcagctcga
    26761 tttgggaata gtcggcggaa acgatgacgc tgcccggcgg tgcagtgaag gcgcggcgca
    26821 cgcggcggcc ttcggcggtg cgaatgggga tgttttgcag gttggggttg ttgctggcga
    26881 ggcggccggt aatggcgacg gcttgggcat aggtggtatg cacgcggtta tcccggggcg
    26941 aaatcatttc gggcagtttg tcggtgtagg tggatttgag tttcgccagg ctgcggtttt
    27001 gcaggatgat tttgggcagg gggtagtcgg gcgcgagctg ttcgagcacg gcttcgttgg
    27061 tggaaatgcc gcctttggcg gtttttttca gcccttttgt cgggatgccc attttgtcga
    27121 acaggatttc ttgcagctgt ttgggcgagt tgaggttaaa cggttgacct gcagcggcgt
    27181 aggcttcctg ttcgagcttc atcagctccg cgccgagttc cgcgctttgg cgggcgagtt
    27241 cggcgcggtc gatttgcacg ccgttgcatt ccatttcaaa caatacctgc gcgacgggaa
    27301 gctccatttt ttcatacatt tcaagttgtt tgtcgtccat ttgcgcgcgc aggcgcgctt
    27361 cgaggcgcag ggcgaaatcg gcatcttggg cggcgtattc ggtcgcctgc ccgatggcga
    27421 catcggcaaa actgatttgc ttcgcgcctt tgccgcacag cgattcgtag gtaatggttt
    27481 ctaaaccgag ccagcgtccg gacaattcgt ccaagccgtg tccgagatgg ctctcgatga
    27541 tgtaggaagc gagcatcgcg tcgccggcaa tgttgtttaa cgcgatgccg tagttggcga
    27601 aaacgtgttg gtcgtatttg aggttttgac cgattttttt cagggcgggg ttttccaaat
    27661 gcggcttcag acggcctaat acgtcttgca aatcaagctg ttcgggcgcg gcagtcaggc
    27721 tgtggcctac ggggatgtaa accgcttcgc ctgcttggaa cgcaatgctg atgccgacca
    27781 gctcggcatt catcgcatct aatgacgtgg tttccgtatc aatgccgatt gtgtccgcct
    27841 tcgctagttt gtccaacaag gcggcaaact gagcttcggt ggtaacggct tgataatcca
    27901 gtttttcagg ggcggtggct ttttcagctc gtttttcaga cggtatttcc gcattcaaag
    27961 ccgcctgctc gccgatgctg tcgctaccga acaaatcatc ggtcgagccg gtattcatgt
    28021 ttgattccgc ttctttcagc caagtacgga agccccagcg tttgaaatca accgcaagct
    28081 gcgcccattt cggcgcggta cggcgcaggc tttcgatgcc gtctgaaagc tcggtgtgca
    28141 agtccacatc ggttttaatc gtgaccaaat catacgacag cggcagttgg ggcagcgcgg
    28201 cttgcaggtt ttcgccgacc ttgcctttga tttccggagc gtgttccatc acgccttgca
    28261 acgaaccgta ggcttccagc catttcaccg ccgttttcgg gccgcatttt tccacgcccg
    28321 gtacgttgtc caccttgtcg ccgatcagcg cgagataatc gcggatttgg tcggggcgaa
    28381 cgccgaattt tgccttcacg ccttcaatat ccagcgtttc tccgctcatc gtgttcacca
    28441 gcgtaacgcg ctcatccacc aactgcgcca tatccttatc gcccgtcgaa acaatgactc
    28501 gcaaaccatg ttccgccccc tgtttcgcca gcgtgccgat cacatcgtcc gcctccactt
    28561 gcccaatcac caataccggc cagcccgtca ggcgcaccaa atccggcagg gcttccgcct
    28621 gcgggcgcaa atcgtccggc atcggcgggc gcgtcgcctt gtattcttca aacatttgat
    28681 ggcggaaatt tttgcctttc gcatcaaaaa ccaccgcgca ataatcgtgc ggatattccg
    28741 accgcaaacg gcgcaacata ttcaatacgc catacagcgc acccgtcggc gcaccgtcag
    28801 gcgcagtcag gttttgcccc atcgcgtgat acgcgcggta gagataggaa gagccgtcaa
    28861 cgaggaggag tgtaggtctg ttggacataa aaaacccgct tgaaaccgat aagggacaga
    28921 aaaaataggg aaggacgatg ccggcttaaa acccgccccc gtacaacccc ggattataac
    28981 ggaaaaggca aatgccgtct gaaacccttg ttcagacagc atttgcggcg gattaagcgt
    29041 tcagcaggct ttcatccaaa gccaaatcgc cgtttcggtt aaccgccact ttgcgcgcca
    29101 acacgttttg cgcgatttgt tgcgcttcgg cgagcgagtg catcagataa gtgccgcatt
    29161 ggtattcgtt caactcgggg attttacttt ggtctttgac attcaaaaca tcctgcatcg
    29221 aagccaacca cgcatcggca acctgctgtt cggaaggcgt gccgataagg ctcatataaa
    29281 aaccggtgcg gcagcccatc ggggaaatgt cgatgatttc cacgccggcg ccgttcaagt
    29341 ggtcgcgcat aaagccggca aacaaatgct ccagcgtgtg gatgcctttt tcgggcagga
    29401 tttctttatt ggggatgcaa aagcgcaggt cgaatacagt aatggtgtcg cctttgggcg
    29461 tggtcatggt tttcgccacg cgtacggcag gggcgtgcat acgggtgtga tcgactttga
    29521 aactgtctaa caggggcatt tgggtatcct tttgtgcggg ttatgtaggt tttcgggata
    29581 ggattttgtc cagcaattca tcgtccaaga cgcggttttc gacttttacc cattcgccgc
    29641 ctgcttcagg gaagccgttg cggcaatatc ctgcctgttc gacaaaatca tagacggcat
    29701 ggatgtagtc gttgatacac aatgcggcta tggtgcaggc gccatcccat aaaatcaaga
    29761 catgattggg gatatgtttg tcggatacat cttcgacatt gtagatgtgc aaggcatcca
    29821 aaatcccctc ttgcgaagcg gcatagaagt agcccgtgtt gccatcatct tcaaagacaa
    29881 caccataagg gatatgtttg gaaaatgatt ctaaaacttt aggcgtgccg acagtaaaat
    29941 ttccgatttc ggcagtccga tatagaggta attgtgccat tgggtaacaa tctttttata
    30001 tcgaaaattg aatcacaatt cggcaatctc aaccgcttcg cccgaagccg cgctcagggc
    30061 ttcgtttaaa acgtcgtaaa aatcgcggct gtcgcgcgtt gccagccatt tgccgttttg
    30121 ttcggcgaaa tggtagccgc cgctttttgc ggcaatccac aattcttggt tgggcgtgtg
    30181 gcggttgacg atgatttgcg tgccgtctcc ggcttcgatg gtcaggacgt ttccggcaaa
    30241 ccggcagtcg aaatcccagc cgttttcgtc gatttggtct tcgatgtgtt caaataatgc
    30301 ttcgctcgcg cggataaact cgctttcggt catcatagct ttttgcatgt tttttgttta
    30361 agatgccgaa tcttgccaca ttcgcgctta tgaaggaagt ttaccgatga aatacggcgt
    30421 attttttgcg gcggcaaccg ccctcctgct ttccgcctgc ggttacaaag gcggcctcta
    30481 cctgcccaaa gaaggcgata cggcgcgttt cggcgtgatc caaaccggtt tgcagcttca
    30541 aggcaaaccg caatccgccc caccaaccca aaaatgaaaa cgaaaatatg accctgtttt
    30601 gcgaacaagt cccctacccc cgccttgccg aagaattcgg cacgccgctt tatgtgtaca
    30661 gccaatccgc gctgaccgga gcatttgaaa actatcaaac cgcctttgcc gctttgaacc
    30721 cgcttgtctg ctacgccgtc aaggcaaacg gcaacctgag cattatcaaa cactttgctt
    30781 cttttggcag cggttttgac attgtgtcgg gcggcgaatt ggcacgcgtt ttggcggcag
    30841 gcggcgatgc ggcgaaaacg attttttccg gcgtaggcaa aagcgaggcg gaaatcgagt
    30901 tcgcgctgaa tgccggcgta aaatgcttca atatggaaag catccccgaa atcgaccgca
    30961 ttcagaaaat tgccgcgcgt ttgggcaaaa ccgcgcccgt ctccctgcgc gtcaatcccg
    31021 atgtcgatgc aaaaacccat ccctacatct ccacaggtct gaaagccaac aaattcggca
    31081 tcgcctacgc cgacgcgctc gaagcctacc gccatgccgc acaacagccc aatttgaaaa
    31141 tcatcggcat cgactgccac atcggttcgc aactgaccga cttaagccca ctggtcgaag
    31201 cctgcgaacg cattttgatt ttggttgacg ctcttgccgc cgaaggcatt gttttggaac
    31261 atttggactt aggcggcggc gtcggcattg tttacaaaga cgaaggcgtc cccgatttgg
    31321 gtgcgtatgc ccgagcggtt caaaaactga tggggacacg ccgtctgaaa ctcattcttg
    31381 agccaggccg cagcttggtc ggcaacgcag gtgcattgct gacgcgcgtc gaatttgtca
    31441 aacacggtga agagaaaaac tttgtgatgg tcgatgcggc gatgaacgat ttgatgcgcc
    31501 cagccctata cgatgcctac caccacatcg aagcggttga aaccaaaaac attgagcctc
    31561 tgaccgccaa catcgtcggc ccgatttgtg aaaccggcga cttcctcggc aaagaccgca
    31621 ccatcgcctg cgaagaaggc gatttgctgc ttatccgcag cgcgggcgca tacggggcca
    31681 gtatggctag caattacaac acgcgcaacc gtgcggcgga ggtgttggtt gacggcggcg
    31741 gatacaaact catccgccgg cgcgaaacct tggaacagca aatggcaaac gaactcgcct
    31801 gcctataagc cgaacatcaa aatgccgtct gaagccttca gacggcattg tccgtttaaa
    31861 gtgacatctt ggcggaatat tcaaacacag cctgttttca aatgacgacg caacaaatcc
    31921 ccgtctcgcc cgactgacga agggaattgt tgaaaaaaat tacgcgcccc ttttatgggg
    31981 tgcaatatct aaggaattga aatgaagcac gctccgatta tcctcctgct taccgcttcg
    32041 tccgccgccc tactttcggc gggctgcacc gcccttccct ctgaccggcc gccgcttcgc
    32101 accctgccga aaagcgcgcc catccaaccc gccaacccat acagccggcc gccttcaggc
    32161 acgccggacg gcgcattcag cacccgcgcc tcaaacgggc gcgtcttgaa aagcatcgtc
    32221 aaaaacggcg tgttcgaccg ctttgtcgat atttaccatc caaacggcaa actgcattcg
    32281 cacacgccgg ttgaaaacgg cgtggcgcaa ggctataccg aacagggcat attgcggacg
    32341 cgcatcctgt accgggacgg gcatatcgtc cgagcgcaaa ctttggatgc gtcgggcaag
    32401 gtggaacgcg aatggcagcc gtaaaacaaa tgccgtctga agcggttcag acggcatttt
    32461 taacgttcta aaggcttact cttccggcag ccttaacagg gaaagcagca gcccgcccca
    32521 aatcaccgcg atggcggcaa ccatcatcac aatggcggaa gtactcattt ttctcctcct
    32581 tgttcatgtt cgtgttcgtc tttgacatta aaatcctgac cgtgtttcca aggcagcagc
    32641 gacagcagca gcccgaacat gattaacgcc gccgacatcc cccagccgaa aatattgagg
    32701 aaaccatccg gataatcgcc gtagtttttt tccaacaatc cggcggtgtc ctgatacagc
    32761 atatagccga gcatcacgac ggtaaacacg acgcaggccg tccacaagcc gccgacgcgg
    32821 atggaggaca aggcgttcag gtgcctgcgt aattccggca acctgccgcc gatgatgatg
    32881 gcggcaacat aaacaaagcc ggcggcaaca atgccgtagg tgttgacgaa tttgtccatc
    32941 acgtccaaaa caggcagccc cgtcgccgta ccgaacagca gcgtggaaac aatgcccatc
    33001 ggaatgcaga ccagcagcgt ggcgttgacg cgcccgatgt tcagcttgtc ctgaatcgcc
    33061 gccacaatca cttcaaggat ggaaatcatc gacgtaacgc cggcgaacac cagcgaaccg
    33121 aaaaacaata tgccgatcag ccagcccatc ggcgcctggt tgataatggt cggaaaggcg
    33181 ataaacgcca aaccgatgcc gccggaggca acctcgttga ccgccttgcc gcccgcctgc
    33241 gccataaagc ccaatgcggc aaacacgccg atgcccgcga gcagttcgaa gctgctgttg
    33301 gcaaaaccga ccaccagccc cgttccgccc aagtcggttt ttttcttcaa ataagaagaa
    33361 taggtaacca taatgccgaa gcagatggaa agcgaaaaga aaatctgccc gtatgccgcc
    33421 acccagacct tggaatcggc gagtttcgac cagtcgggcg taaacaatgc gtccaagccc
    33481 tttgccgcac ccggcagcgt cagcgaaatg ccgaccataa tcaaaaacat caccaaaagc
    33541 agcggcataa agaacgacga ggcgcgcgcc acgccctttt gcacgcccaa agccataatg
    33601 gcggcggtaa aaacccacac gcccgccaaa gggccggcga ctttgccgac aaaatccaaa
    33661 cccaaggctt ccgggcccgc catttgcagg aagtccttaa agaaaaaacc ctgcggatcc
    33721 gcaccccagg cggcgttgac cgaataatag gtatagcttg ccgcccaacc gataatcact
    33781 gcgtaataga tgcagatgac gatattggtc atcacgttcc accagccgac cggctcgaac
    33841 cagcgtccga ggcggcggaa agccaagggc gcagaacccc ggtaacggtg gccgatggca
    33901 taatcgagca gcagcagcgg gatgcccgcc gtcagaagcg cgaccagata gggcaggatg
    33961 aacgcgccgc cgccgttttc aaaagcaata taggggaaac gccaaatatt gcccaagccg
    34021 acggcggacc cgatggcggc aatcataaac gcgcggcgcg tgccgaatgt ggcgcgttct
    34081 ttcgttttgg aatcagacac gttgatacct cttgaattat ttattaaaaa caagccgtta
    34141 taggcaaaca tatatagaaa cagcgtctga cagggataat gtcttctgaa aaaacaaacc
    34201 ggcttgtggc cgattgttta caatctatgt gcttatcgta aaaaatttta acgccgatgg
    34261 caagcggtga aggcttgaaa acgaaaaatt ttttatccaa atacaaaaac cactccataa
    34321 gaaacaaccg ccaacttccc cgtcattccc gcgcaggcgg gaatccagac ccccaacgcg
    34381 gcaggaatct atcggaaata accgaaaccg gacgaaccta gattcccgct ttcgcgggaa
    34441 tgacggcgga gaggtgctgt ttttccgata aattcctgcc gctcttcgtt tttgggatgg
    34501 cgggaaatat agcggattaa caaaaatcag gacaaggcgg ccagccgcag gcagtacgaa
    34561 tggtacggaa ccggttcgcc cggtgcttgg gcgccttagg gaatcgttcc ctttgagccg
    34621 gggcggggca acgccgtacc ggtttttgtt aatccgctat aattttaagg tttgcgcctt
    34681 agccgcactt attcgcaaaa aaaccgcacg gcgttgaccg tgcggcttgt tgtctgaagg
    34741 tttcagacgg cattgcttac atcatgccgc ccataccgcc cattcccccc atatcgggca
    34801 cagccggttt ttcttcaggg atttcggcaa tcatgcagtc ggtcgtcagc atcagaccgg
    34861 cgatagacgc ggcgtgttgc agcgcggaac gggttacttt ggcagggtcg agtacgccca
    34921 ttccgatcat gtcgccgtat tcgccggagc ctgcgttgta accgtagttg cctttgcctt
    34981 ccaacacttt gttcaccacc acgctgggtt cgccgcctgc gttggcaacg atttggcgca
    35041 gcggagactc aacggcgcgc aatacgattt gtacgcctgc gtcttggtcg gcattgccgg
    35101 tgtgcaggtt ttccaaagcg gcgcgggcgc gcaacagggc tacgccgccg cctgcaacca
    35161 cgccttcttc aacggctgcg cgggtagcgt gcagcgcgtc ttccacgcgg tcttttttct
    35221 ctttcatttc gacttcggtc gccgcgccga ctttgatcac tgccacgcct cctgccagtt
    35281 tggcaacgcg ctcttgcagt ttttctttgt cgtaatcgct ggtcgcggtt tcgatttgtt
    35341 ggcggatttc ggcaacacgc gcttcgattt gggctgcgtc gccgaagccg tcgatgacgg
    35401 tagtgttttc tttaccgatt tcgatgcgtt tggcttgacc caagtcgtcc aaagtcgctt
    35461 tttccaaaga caggccgact tcttcggaaa tcactacgcc gccggtcagg atggcgatgt
    35521 cttgcagcat cgctttgcgg cggtcgccga agccgggggc tttgacggca acggttttca
    35581 ggatgccgcg gatgttgttc acgaccaaag tcgccaaggc ttcgccttct acgtcttcag
    35641 cgataatcaa cagcgggcgg ctggctttcg ccacttgttc caacacgggc agcaggtcgc
    35701 ggatgttgct gatttttttg tcgaacagca aaacaaacgg attgtccaga ccggcgattt
    35761 gtttttccgc gtcgttgatg aagtaagggg acaggtagcc gcggtcgaac tgcatacctt
    35821 caaccacgtc cagctcgttt tccaaagatt tgccatcttc aacggtaatc acgccttctt
    35881 tgccgacttt ttccatcgct tcggcgataa tcgcgccgac ttgttcgtcg gagttggcgg
    35941 aaatcgagcc gacttgggcg atttctttgg aagtatcgca aggtttggcg atgtttttca
    36001 gctcgtcaac caaagcggca acggctttgt cgatgccgcg tttcagatcg gtcgggttca
    36061 tgccggcggt aacgtatttc atgccttcgg caacgatgga ttgtgccaat acggtggcgg
    36121 tagtcgtacc gtcgccggct acgtcgttgg ttttggacgc gacttctttc accatttgcg
    36181 cgcccatatt ttcaaacttg tctttcagtt cgatttcttt ggcgacggtt acgccgtctt
    36241 tggtgatgtg cgggccgccg aaagcgcggt caaccaccac gttgcggcct ttggggccca
    36301 aggttacgcg cacggcgttt gccaaaatat tcacgccgtt taccattttt tggcggactt
    36361 cattgccgaa ttgtacgtct tttgctgcca tttcaattct ccaaaaatca ttaaaactgt
    36421 ctgataaaac cgtttatgcc gtctgaaggc ggtttgccgt ttcagacggc atcgtgtccg
    36481 tatttatttt tcaacgatgc cgaaaatatc ttcttcgcgc attaccaaca gctcttcgcc
    36541 gtcggctttt acggtttggc cgctgtattt gccgaagatg attttgtcgc cgactttgac
    36601 atccagcgga cggcgcgcgc cgtctttgcc gattttgccc gcgcccacgg cgatgacttc
    36661 gcccatatcg ggtttttcgg cggccgcacc cggcaggacg atgcccgatg cggttttttc
    36721 ttcagcttcc aagcgtttga cgacgacgcg gtcgtgtaaa ggacggatgg tcatatttat
    36781 gctccgataa atggtttgaa aacaatcatc tgcccgaacg gttcggacaa attgaagtgg
    36841 aaaccgggct gccgcctaac ggcccgcccg tacaagtcgg caaaattagg gtgtgtgcgg
    36901 gaaaattcaa gtgaggcgga aaaaaattta tttccgccgt tttttatagt ggactaaatt
    36961 taaaccggta cggcgttgcc ccgccttagc tcaaagagaa cgattcccta aggtgctgaa
    37021 gcaccgagtg aatcggttcc gtactatttg tactgtctgc ggcttcgccg ccttgt
//
LOCUS       DAXGCP010000010        36694 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.010, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000010 DAXGCP010000000
VERSION     DAXGCP010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 36694)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36694)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36694
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.010"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(44..535)
                     /gene="dtd"
                     /locus_tag="ACFJCW_000433"
     CDS             complement(44..535)
                     /gene="dtd"
                     /locus_tag="ACFJCW_000433"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HFC4150672.1"
                     /translation="MRAVIQKTVGAKVDVVSEAGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADAASGRRPSFSQAAP
                     AEQAQRLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(609..1367)
                     /locus_tag="ACFJCW_000434"
     CDS             complement(609..1367)
                     /locus_tag="ACFJCW_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC4150673.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQRPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAGMNRGDVTRNPVKLGERYYLFKLGAVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDALLEENGVKP"
     gene            complement(1437..2303)
                     /locus_tag="ACFJCW_000435"
     CDS             complement(1437..2303)
                     /locus_tag="ACFJCW_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC4150674.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKDALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEVKAVYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKRTGAPDGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(2352..2630)
                     /locus_tag="ACFJCW_000436"
     CDS             complement(2352..2630)
                     /locus_tag="ACFJCW_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC4150675.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGLSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(2630..2920)
                     /locus_tag="ACFJCW_000437"
     CDS             complement(2630..2920)
                     /locus_tag="ACFJCW_000437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HFC4150676.1"
                     /translation="MEYFMLLATDGEDVHEARMAARPEHFKRLETLKSEGRLLTAGPN
                     LLPDNPERVSGSLIVAQFESLDAAQAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(2923..3453)
                     /locus_tag="ACFJCW_000438"
     CDS             complement(2923..3453)
                     /locus_tag="ACFJCW_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HFC4150677.1"
                     /translation="MKFVSDLLSVILFFATYTVTKNMIAAAAVALVAGVVQAAFLYWK
                     HKRLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPTVLFWCGALFLLGSHLAGKNGLK
                     ASIGREIQLPDAVWGKLTYMWVGFLIFMGIANWFVFTRFEAQWVNYKMFGSTALMLFF
                     FIIQGIYLSTYLKKED"
     gene            3761..6076
                     /gene="tspA"
                     /locus_tag="ACFJCW_000439"
     CDS             3761..6076
                     /gene="tspA"
                     /locus_tag="ACFJCW_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HFC4150678.1"
                     /translation="MKLIAASIAVAASFQAHARLGGLNIRSNLDEPFSGSITVTGEEA
                     KALLGGGSVTVSEKGLTAKVHKLDDKAVIAVSSAQAVRDPVLVFRIGAGAQVREYTAI
                     LDPVGCSPKTKSALSDGKTHRKTAPKAESQENQNAKALRKTDKKDSANSAVKPAHNGK
                     THTVRKGETLKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHIPNLNRI
                     KAAAPKKIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPIEKPVEKPVEKPEAKVAA
                     PEAKAEKPAVRPEPKPAVSETPASATERQPGPVPAANTAASETAAESAPQEAAASAID
                     TPTDETGNTVSEPVAETASEVAAEPVAEPVEQVSAEEETESGLFDGLFGGSYTLLLAG
                     GGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIKITFAEVETPATPEPA
                     PKNDVNDTLALGGESEEELSAKQTFDVETDTPSNRIDLDFDSLAAAQNGILSGALTQD
                     EETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESVAQTAENKPETVDTD
                     FYNNLFSNNHIGTEETASAKPAAPSGLAGFLKASSPETILEKTVAEVQTPEELHDFLK
                     VYETGAVAETAPETPDFNAAADDLSALLQPAEAPAVEENAAEITLETPDSNTSEADAL
                     PDFLKDGEEETVDWSIYLSEENIPNNADTGFPSESVGSDAPSEAKYDLAEMYLEIGDR
                     DAAAETVQKLLEEAEGDVLKRAQALAQELGI"
     gene            complement(6249..6665)
                     /gene="gloA"
                     /locus_tag="ACFJCW_000440"
     CDS             complement(6249..6665)
                     /gene="gloA"
                     /locus_tag="ACFJCW_000440"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HFC4150679.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGL
                     MKHGTTVIAFVEDPDGCKIEFVQKKSGDDSVAYANT"
     gene            complement(6690..7859)
                     /gene="lapB"
                     /locus_tag="ACFJCW_000441"
     CDS             complement(6690..7859)
                     /gene="lapB"
                     /locus_tag="ACFJCW_000441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HFC4150680.1"
                     /translation="MDNELWIILLPIILLPVFFTMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVVDGRPQSYDLNLTLGKLYRQRGENDKAINIHRTMLD
                     SPDTVGEKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETAQLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHVYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDLDP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(7870..8184)
                     /locus_tag="ACFJCW_000442"
     CDS             complement(7870..8184)
                     /locus_tag="ACFJCW_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HFC4150681.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINMDAVTFSYLPGQSVNLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENSRLRAEVKKSARLSGQKLTAPPIQNAAESAK
                     QP"
     gene            8494..9492
                     /gene="ilvE"
                     /locus_tag="ACFJCW_000443"
     CDS             8494..9492
                     /gene="ilvE"
                     /locus_tag="ACFJCW_000443"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HFC4150682.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLTLAPGA
                     HALHYGSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALVE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWLLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKNQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(9737..10522)
                     /gene="fabI"
                     /locus_tag="ACFJCW_000444"
     CDS             complement(9737..10522)
                     /gene="fabI"
                     /locus_tag="ACFJCW_000444"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HFC4150683.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(10677..11498)
                     /gene="dapD"
                     /locus_tag="ACFJCW_000445"
     CDS             complement(10677..11498)
                     /gene="dapD"
                     /locus_tag="ACFJCW_000445"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HFC4150684.1"
                     /translation="MSLQNIIETAFENRADITPTTVAPEVKEAVLETIRQLDSGKLRV
                     AERLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNAVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGAIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSLPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(11708..13351)
                     /gene="pgi"
                     /locus_tag="ACFJCW_000446"
     CDS             complement(11708..13351)
                     /gene="pgi"
                     /locus_tag="ACFJCW_000446"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC4150685.1"
                     /translation="MDAFTRAWYALERHYQDTCHILLRDRFAAEPDRFERMHERLDGM
                     LFDYSKNRFGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYADGRDVLPEIRRELNRALKFAHSLDDGLYQGITGKRIADFVHIGIGGSDLGPAM
                     CVQALEPFRRQISVHFVSNADPACLDEVLCRLNPETTMFCVASKSFKTPETLLNAEAV
                     KAWYRGAGFSESETARHFCAVSADTEAAQSFGIAAERVFAMYDWVGGRYSVWSPVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPAWLNQLDMESLGKSRASDGSPAACKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGAEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPCNLGMLMAAYEHKTFVQGAIWNVNPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGGGAA"
     gene            13861..15093
                     /gene="pilG"
                     /locus_tag="ACFJCW_000447"
     CDS             13861..15093
                     /gene="pilG"
                     /locus_tag="ACFJCW_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HFC4150686.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGQVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPPLTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLFAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            15167..16027
                     /locus_tag="ACFJCW_000448"
     CDS             15167..16027
                     /locus_tag="ACFJCW_000448"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HFC4150687.1"
                     /translation="MSDLSVLSPFAVPLAAVLGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKEHLNLPLTDDESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYSSLWLLCAVYKLLTGKTGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGRHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVR"
     gene            16024..16656
                     /gene="coaE"
                     /locus_tag="ACFJCW_000449"
     CDS             16024..16656
                     /gene="coaE"
                     /locus_tag="ACFJCW_000449"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261706.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HFC4150688.1"
                     /translation="MTAWVGLTGGIGSGKSAAAQYFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFNTQGLLRRDILRKEIFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFISLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLREKTMLLHAFYSGIFASKPTQGKHNG"
     gene            16649..16858
                     /locus_tag="ACFJCW_000450"
     CDS             16649..16858
                     /locus_tag="ACFJCW_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HFC4150689.1"
                     /translation="MAESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSGQTESLPEISEPDGAYR"
     gene            complement(16944..18620)
                     /gene="pilB"
                     /locus_tag="ACFJCW_000451"
     CDS             complement(16944..18620)
                     /gene="pilB"
                     /locus_tag="ACFJCW_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HFC4150690.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIAVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVGILDVAYKEGMVDLRRAGILKIMQGITSLEEVTANTND"
     gene            complement(18866..18937)
                     /locus_tag="ACFJCW_000452"
     tRNA            complement(18866..18937)
                     /locus_tag="ACFJCW_000452"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18902..18904),aa:Arg,seq:cct)
     gene            complement(18958..19404)
                     /locus_tag="ACFJCW_000453"
     CDS             complement(18958..19404)
                     /locus_tag="ACFJCW_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HFC4150691.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITVSATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGCG
                     VPLMGRQPVLVTGLLIGTVIGVAFMGGIPVGPLIAADILSFVAGKV"
     gene            complement(19408..20382)
                     /locus_tag="ACFJCW_000454"
     CDS             complement(19408..20382)
                     /locus_tag="ACFJCW_000454"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HFC4150692.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIRVIQYKTAKLFEAAAQVGAILGKASPGHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRGYFEKIRDYV
                     VRSDALAYSIGEARKAVDCAVAALDALSDSEVKDAMIQLAKESLVRVS"
     gene            20606..20914
                     /gene="rplU"
                     /locus_tag="ACFJCW_000455"
     CDS             20606..20914
                     /gene="rplU"
                     /locus_tag="ACFJCW_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HFC4150693.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAQLDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            20939..21211
                     /gene="rpmA"
                     /locus_tag="ACFJCW_000456"
     CDS             20939..21211
                     /gene="rpmA"
                     /locus_tag="ACFJCW_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HFC4150694.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKIDGYVEFKTKGALNRKTVSIRPYTGSEE"
     gene            21446..22630
                     /gene="ubiM"
                     /locus_tag="ACFJCW_000457"
     CDS             21446..22630
                     /gene="ubiM"
                     /locus_tag="ACFJCW_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HFC4150695.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEIVSQLDNVSILTDTAVKEVKTSDNEAQVFLENGDILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEKRLTNTVITVDTDKINSVQNLSPEELAASVKEQLKGRLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(22819..22974)
                     /gene="rpmG"
                     /locus_tag="ACFJCW_000458"
     CDS             complement(22819..22974)
                     /gene="rpmG"
                     /locus_tag="ACFJCW_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HFC4150696.1"
                     /translation="MRDKIKLESGAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(23006..23239)
                     /gene="rpmB"
                     /locus_tag="ACFJCW_000459"
     CDS             complement(23006..23239)
                     /gene="rpmB"
                     /locus_tag="ACFJCW_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HFC4150697.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(23489..25012)
                     /gene="farB"
                     /locus_tag="ACFJCW_000460"
     CDS             complement(23489..25012)
                     /gene="farB"
                     /locus_tag="ACFJCW_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HFC4150698.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFSVANAVSVPLTGFLAKRIGEVKLFTAAAAGFVIASWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRMLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKHRETATVRTPTDYVGLTLMMVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSAWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGVGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDGQTLGIINNTITQQGFIIGSNEIFLAGSILFIVLIPIVWLAKPPFHSGGGGH"
     gene            complement(25036..26190)
                     /gene="farA"
                     /locus_tag="ACFJCW_000461"
     CDS             complement(25036..26190)
                     /gene="farA"
                     /locus_tag="ACFJCW_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HFC4150699.1"
                     /translation="MEAHTDETKLQNTQVKRKRRLTALTLLFALSAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RTAVSQAQAAVKAALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
     regulatory      26431..26475
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
     gene            26479..26952
                     /gene="queF"
                     /locus_tag="ACFJCW_000462"
     CDS             26479..26952
                     /gene="queF"
                     /locus_tag="ACFJCW_000462"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HFC4150700.1"
                     /translation="MSRNNEELQGISLLGNQKTQYPTGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIVIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAVHPFANYGKAGTEFEALARKRLFEHDAQ"
     gene            27027..27713
                     /locus_tag="ACFJCW_000463"
     CDS             27027..27713
                     /locus_tag="ACFJCW_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HFC4150701.1"
                     /translation="MYALTAAQQQKALFRLVLFHILIIAASNYLVQFPFRIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     QFNTFVGRIALASFAAYALGQILDIFVFDKLRRLKAWWIAPAASTVIGNALDTLVFFA
                     VAFYASSDEFMAANWQGIAFVDYLFKLTVCTLFFLPAYGVILNLLTKKLTALQTKQAQ
                     DRPVPSLQNP"
     gene            complement(28063..29355)
                     /locus_tag="ACFJCW_000464"
     CDS             complement(28063..29355)
                     /locus_tag="ACFJCW_000464"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HFC4150702.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTEGTERVRPQRV
                     EQKLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGSAREVQFFTDEDGERNLVALEKKGGIWRRSASDADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLLYDSLYFHGQQ
                     VAAGDILAAEVVKGGTTHQAFYYRSDKEGGGGGNYYDEDGRVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            29432..30400
                     /locus_tag="ACFJCW_000465"
     CDS             29432..30400
                     /locus_tag="ACFJCW_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150703.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSPHRQSCTASA
                     FYARYLWCGRLAQRPAQSLNMPSETVALATPVWQKMGLHQANVLTAEYLDVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPRAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLNAHPVNHNRKKRGLPELNGLWLWDSLHGSAQGGTLFADTVWSRFH
                     PNRRALPDSFRAYAETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRTGKIKRLDIATDGQHGGTLTFKPTDRRKFWRCTKTFDGIW"
     gene            complement(30601..32070)
                     /locus_tag="ACFJCW_000466"
     CDS             complement(30601..32070)
                     /locus_tag="ACFJCW_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC4150704.1"
                     /translation="MVIFYFYFCGKTFMPARNRWMLLPLLASAAYAEETPREPDLRSR
                     PEFRLHEAEVKPIDREKVPGQVREKGKVLQVDGETLLKNPELLSRAMYSAVVSNNIAG
                     IRVILPIYLQQARQDKMLALYASGILAQAEGRVKEAVSHYRELIAAQPDAPAVRMRLA
                     AALFEDRQNEAAADQFDRLKTEDLPPQLMEQVELYRKALRERDAWKVNGGLSVTREHN
                     INQAPKQQQYGNWTFPKQVDGTAVNYRFGAEKKWSLKNGWYTTAGGDVSGRVYPGNKK
                     FNDMTAGVSGGIGFADRRKDVGLAVFHERRTYGNDAYSYANGARLYFNRWQTPRWQTL
                     SSAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWTGGLDFYRERNPADRGDNFNR
                     YGLRFAWGQEWGGSGLSSLFRLGVAKRHYEKPGFFSSFKGERRRDKESDTSLSLWHRA
                     LHFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            complement(32312..32569)
                     /locus_tag="ACFJCW_000467"
     CDS             complement(32312..32569)
                     /locus_tag="ACFJCW_000467"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC4150705.1"
                     /translation="MRAKTRFALRNGVNLQPFAAFNVLHRSKSFGMEMDGEKQTPAGR
                     TALEGRFGIEAGWKGHMSARIGYGKRTDGDKEAALSVKWLF"
     gene            32495..32656
                     /locus_tag="ACFJCW_000468"
     CDS             32495..32656
                     /locus_tag="ACFJCW_000468"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150706.1"
                     /translation="MQNIKSGKRLKIDTVTQSKTGFCPNAGADLPLTAAEQPDRRPSL
                     SVKPPFTPK"
     gene            complement(32753..33166)
                     /locus_tag="ACFJCW_000469"
     CDS             complement(32753..33166)
                     /locus_tag="ACFJCW_000469"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150707.1"
                     /translation="MSFDCFGAFSYQPGSDTRPTNVGDTADFSFSDKPANGVFHYFSS
                     GKTDQKSSEALYDEINITDNYRTDLKQAVKKQLQDLYKTRPEAWEENKKRVREEIIKQ
                     FGISEDVFNKLQQKMPQKINFLIEEQVLTPYILRP"
     gene            complement(33697..33942)
                     /locus_tag="ACFJCW_000470"
     CDS             complement(33697..33942)
                     /locus_tag="ACFJCW_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150708.1"
                     /translation="MLKSIELNSHIRNRLAAYLKGRGLDFQTAMQEEEGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            34054..34482
                     /locus_tag="ACFJCW_000471"
     CDS             34054..34482
                     /locus_tag="ACFJCW_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HFC4150709.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDAPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGRWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            34494..34969
                     /locus_tag="ACFJCW_000472"
                     /pseudo
     CDS             34494..34969
                     /locus_tag="ACFJCW_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
     gene            complement(34999..35487)
                     /locus_tag="ACFJCW_000473"
     CDS             complement(34999..35487)
                     /locus_tag="ACFJCW_000473"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HFC4150710.1"
                     /translation="MLKITIIAACAENLCIGAGNAMPWHIPEDFAFFKVYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETVASLEVALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPEIDRTHWKEAERTERRVSSKGVAYTFVHYL
                     KG"
     gene            complement(35555..36610)
                     /gene="aroG"
                     /locus_tag="ACFJCW_000474"
     CDS             complement(35555..36610)
                     /gene="aroG"
                     /locus_tag="ACFJCW_000474"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HFC4150711.1"
                     /translation="MIHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDRRLLVIIGPCSIHDPKAALEYAERLLKLRKRYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAVEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIADQLEQDGGNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANTKRMARAG"
BASE COUNT         8670 a        10493 c         9120 g         8411 t
ORIGIN      
        1 tattgtcgtt cattgtcgat atttcatcat tgcggactca atttcaatcc ggaacaacct
       61 tcatttttgg ggaaatccgc gtcatgaaag agtccagcag tatggttacc ggcccgtcgt
      121 tgcagagcga cacctgcata tgcgtgcgga aacgccctgt ttcgacatga atcccgtgtc
      181 cgcgtaacag ctccgccgtt cgcaggtaaa gccgttgcgc ctgttctgcc ggcgcggctt
      241 gggaaaacga aggccgccgc ccgcttgccg cgtcggcata aagcgtaaac tgcgacacca
      301 gcagcaccgc gccgccgaca tctttcaaag acaggttcag cttgcccgct tcgtcttcaa
      361 acacgcgcaa atgtgcgatt ttgtcggcga tatagcgtgc atctttttct gtgtcgctat
      421 gcgttacacc gagtaacacg acaaacccgc cgtcgatttt gccgcaggtt tccgtgccgg
      481 cttcggacac gacatccacc tttgcaccta ccgttttctg tatgaccgca cgcataagcc
      541 gtcctcctta cctgaacgtg caatgccgtc tgaaaaggct tcagacggca tcggtatcgg
      601 aaatgccatt acggtttgac accgttttct tccaaaaggg catcgatttt caagcgggct
      661 ttttcctgcc tcaaaccttg ttccaactgg tttctgacca actcgaaagg ctgcgcgtcg
      721 gggtttttcc cgaccgcgcc gagtttgaac aggtaatagc gttcgcccaa tttgaccgga
      781 ttgcgggtaa cgtcgccacg gttcataccg gcaaactgcg aagccagcgg ctcgggaagc
      841 tgctgcgcca taatgaaacc gtcgaacgcc tgctcgtcgt tcggataacg cttcatcagc
      901 ccttcaaaag acagcccttt gagcaggagc tgctgcgcct gacgcgcctc ctcttcggtt
      961 gcgaagctga cctgctgcaa tttgatcatg cggatttgcc gctcataaaa ctgacgcagt
     1021 gcgctttcgg aaaccgtttc cgaacgttcc agaaaacgga cgtactcctc ggcataaaaa
     1081 gacgcttcgg cgattttaaa gcggttttgg acatccttat ccttatccaa accttccttc
     1141 aatgccctgt ttttcaaaac ttccaaagtt tgcagccggc ggacggcatc gtttcggatt
     1201 gcctgcccgt ccggtctttg ggactgctcc gcatgccggt ctgcctgctg catgatctgc
     1261 gccaccagcg tatccaccaa agccgggtcg atttcgggtg ctttggctgc cgcaaaacct
     1321 gccaacattg cagcaataac tgcggcagcg gtctttttct gtttcatggt attccctgtc
     1381 ctgcgcggcg gcaaaacgcc tgtatgaacg tcttgccgcc gtatcccgtt ttcagattat
     1441 tttgcaggtt tgatgtttgc cttacccaac agcgcaccga cggcacggtc aatccgttcc
     1501 gcctgaaggt tgccggcaat ctgtcctttc atttcgtcaa aagaaggcac tttcacctcg
     1561 cggctgtcgt tgacataata aacgccgtag aaatcgccgt ttttcagcgg cgttgccgta
     1621 aattcgcctt ttttcaagtc cttaattgcc tgataaagcg gcggaacacc ctgttccaaa
     1681 tctttcagcg gcacatatcc gtccggcgcg ccggtccgtt tggtgcggtc gttgagcgag
     1741 tattgtttca aaacggcatc aaaacctttt ttcgccttca aatcggcaac cgcttttttc
     1801 gcattttctt ccttgtcggt caggatttcg cccaactgga cttcctgcgt gcctttataa
     1861 aaaccgctga tattgtcgta aacggctttt acttcctgct cggaaaccgg ttgggttttg
     1921 gcgatatgca gtgcgtatgc ctcgccgttc aagccatatt ttaccgcctg ccaaacggtt
     1981 ttgaaggacg gtttcttgtc gtcgcccgac tttttcgctt cggcacgcaa tttggcaagc
     2041 gcatctttaa actctgccga ccggtcgagt ttcaggcgtt tcacttcctg tgcgaccacg
     2101 gtgttgacca cttcgttttc cagcagggat tggcgcagtt gcggcgtgtc ttcggcacgg
     2161 ctgttttccg cacggaatgc ggcaacctgc gcatcgatga cggaactgtc gattttctga
     2221 ccgttaacgg ttgccagcgt ttgggcaaac aggctgccgg aacaggcaag cagcgcaacg
     2281 gaagtcagga tttttgcttt cataatcttc tctctttaaa ttttaaattg aaatattcag
     2341 gcagacttca ttcagtccgc cgtatggaaa tactcgtcag gggtagccgc ccggatgccg
     2401 agcgcgtgaa tcatgccgcc tgaaaataaa tctttgagca gcgatttgac cgttttctga
     2461 cggttcagac ggcttaaacc ttcaaaacgg ccgctgacga ccaaaacggc ataatgtccg
     2521 ccgccggtat tgcccgcgtg tcctttgtgc agatggctct catcgccgat ttccaacacc
     2581 agaggatcga gcgtctgcag gcgttcgcgg atcaaatcga cagccggcat tatttgaaca
     2641 ccgctttaaa cggcttgatc agcacttcgc tgtacacgcc ggcatgaaca tagggatcgt
     2701 cttcagccca agcctgcgcc gcatccaaag actcgaactg tgccacaatc aagctgcccg
     2761 aaacacgttc gggattgtcc ggcagcaggt ttgggcctgc cgtcagcaga cggccttccg
     2821 atttcagtgt ttccagccgt ttaaagtgtt cgggacgtgc cgccatacgc gcttcatgca
     2881 catcctcccc gtctgttgcc agcaacataa aatattccac agtcaatcct cctttttcag
     2941 ataggtactc agataaatac cctgaataat aaagaaaaaa agcatcagcg cagtcgaacc
     3001 gaacatctta tagttaaccc attgcgcttc aaacctagta aacacaaacc agttggcaat
     3061 acccataaaa atcagaaaac cgacccacat atatgtcaat tttccccata cggcatccgg
     3121 aagctgaatc tccctgccga tactcgcttt caagccgttt ttacccgcaa ggtggctgcc
     3181 cagcaggaat aacgccccgc accagaacaa tactgtcggc ttccacataa tgaagcggct
     3241 gtcgcccaaa acaatggttg cgccgccgaa tacgacaatc agcaccagtc cgacccactg
     3301 catcgtatcc agccttttat gcttccaata caggaaagcc gcctgaacca cgcctgcaac
     3361 caaggcaacc gccgcagcgg caatcatatt tttggtaacg gtataagtag caaaaaacaa
     3421 gatgacggac aaaaggtcgc tgacaaattt catatccaaa tgagaaagca aatcaaataa
     3481 acgctaatca tacaggcaga accctatctt tgcacctgca aaaccaacaa attttgtttt
     3541 gattaatgca aatatgcaca gatgtttttg aaaaaagatg gaaatatgtc ataatttata
     3601 aaattggctt taaaatacag cttcggccgg aacctctgcc tatccgcacc ctatcgtccg
     3661 tattgcctat gcctgatgac gaaatttaca gactgtacgc ggtcaaaccg tattcagccg
     3721 ccaacccaca ggggatacat cttgcaaaaa caacagacaa atcaaactga ttgccgcctc
     3781 catcgcagtt gccgcatcct ttcaggcaca tgcgcgactg ggcggactga atatccggtc
     3841 caaccttgac gaaccctttt ccggcagcat taccgtaacc ggcgaagaag ccaaagccct
     3901 gctaggcggc ggcagcgtta ccgtttccga aaaaggcctg accgccaaag tccacaagtt
     3961 ggacgataaa gccgtcattg ccgtttcttc cgcacaggca gtccgcgatc ccgtcttggt
     4021 gttccgcatc ggtgcaggcg cgcaggtacg cgaatacacc gccatcctcg atcctgtcgg
     4081 ctgctcgccc aaaaccaaat ctgcactttc agacggcaag acacaccgca aaaccgctcc
     4141 gaaagcagag tcccaagaaa atcaaaacgc caaagccctc cgcaaaaccg ataaaaaaga
     4201 cagcgcaaac tcagccgtca aaccggcgca taacggcaaa acccataccg tccgcaaagg
     4261 cgaaacgctc aaacagattg ccgccgccat ccgtccgaaa cacctgacgc tcgaacaggt
     4321 tgccgatgcg ctgctgaagg caaacccaaa tgtttccgca cacggcagac tgcgtgcggg
     4381 cagcgtgctt cacattccga atctgaacag gatcaaagcg gcagcaccca aaaaaatcaa
     4441 agcggaacaa cccaaaccgc aaacggcgaa acccaaagcc gaaactgcat ccatgccgtc
     4501 tgaaccgtcc aaacaggcaa cggtagagaa accgatagag aaacctgtcg aaaaaccggt
     4561 tgaaaaacct gaagcaaaag ttgccgcgcc cgaagcaaaa gcggaaaaac cggccgttcg
     4621 acccgaaccc aaacccgcag tgtccgaaac tccggcttcg gcgacagaac gccaacccgg
     4681 acctgtaccc gctgcaaata ctgccgcatc ggaaaccgct gccgaatccg ccccccaaga
     4741 agccgccgct tctgccatcg acacgccgac cgacgaaacc ggtaacaccg tttccgaacc
     4801 tgttgcggaa acagccagtg aagttgccgc cgaacccgtt gccgaacctg tcgaacaggt
     4861 ttctgccgaa gaagaaaccg aaagcggact gtttgacggt ctgttcggcg gttcgtacac
     4921 cttgctgctt gccggcggag gcgcggcatt gatcgccctg ctgctgcttt tacgccttgc
     4981 ccaatccaaa cgcgcgcgcc gtaccgaaga atccgtccct gaagaagagc ctgaccttga
     5041 cgacgcggca gacgacggca taaaaatcac ctttgccgaa gtcgaaactc cggcaacgcc
     5101 cgaacccgct ccgaaaaacg atgtaaacga cacacttgcc ttaggtgggg aatctgaaga
     5161 agagttatcg gcaaaacaaa cgttcgatgt cgaaaccgat acgccttcca accgcatcga
     5221 cttggatttc gacagcctgg cagccgcgca aaacggcatt ttgtccggcg cacttacgca
     5281 ggatgaagaa acccaaaaac gcgcggatgc cgattggaac gccatcgaat ccacagacag
     5341 cgtgtacgag cctgagacct tcaacccgta caaccctgtc gaaatcgtca tcgacacgcc
     5401 cgaaccggaa tctgtcgccc aaactgccga aaacaaaccg gaaaccgtcg ataccgattt
     5461 ctacaacaac ctgttctcaa acaaccatat cggcacagaa gaaacagctt ccgcaaaacc
     5521 tgccgcaccc tccggactgg caggcttcct gaaggcttcc tcgcccgaaa ccatcttgga
     5581 aaaaacagtt gccgaagtcc aaacaccgga agagttgcac gatttcctga aagtgtacga
     5641 aaccggtgcc gtcgcggaaa ctgcgcctga aacgcccgat ttcaacgccg ccgcagacga
     5701 tttgtccgca ttgcttcaac ctgccgaagc accggccgtt gaggaaaatg cagcggaaat
     5761 cactttggaa acgcctgatt ccaacacctc tgaggcagac gctttgcccg acttcctgaa
     5821 agacggcgag gaggaaacgg tagattggag catctacctc tcggaagaaa atatcccaaa
     5881 taatgcagat accggtttcc cttcggaatc tgtaggttct gacgcgcctt ccgaagcgaa
     5941 atacgacctt gccgaaatgt atctcgaaat cggcgaccgc gatgccgctg ccgagacagt
     6001 gcagaaattg ctggaagaag cggaaggcga cgtactcaaa cgtgcccaag cattggcgca
     6061 ggaattgggt atttgattcc caactgccct ttcgcagatc aaggatgccg tttcagacgg
     6121 catctttttt tgccttatcg gtgtaacgga taaagtttga accggcacag gctcaaacag
     6181 caggccgacg gcaacaaaat gccgtccgaa acccctaaag gcttcagacg gcattggcgg
     6241 cggcggtatc aggtattcgc ataggcaacc gaatcgtcgc cgcttttctt ttgaacgaac
     6301 tcgattttgc atccgtcggg gtcttctacg aaggctatca cggttgtgcc gtgtttcatc
     6361 aggccggctt cgcggacgac gtttccgccc tgccgcttca cgcgttcgca ggcttcgtag
     6421 gcatcgtcca cttcaaccgc gatgtgtccg taggcgttgc ccaagtcgta tcgttccgta
     6481 tcccagttgt gcgtcagttc caaaaccgtg ctgtcggttt cgtcgccgta accgacgaag
     6541 gcaagggtaa atctgccttc gggatagtct tttcggcgga gcagtttcat acccaaaacg
     6601 ttttggtaga aatcgaggga tttttcgaga ttgcccacgc ggagcatagt atggagtaag
     6661 cgcatttttc gtgttcctct cggtggtggt taaacttcga ttttattcgg cgtaaacgtc
     6721 tgccatttgt tgcaggcggg acagtgccag aaaaagactt gggatttgaa gtggcagttg
     6781 cggcaacggt acatcacgct gcgctggagc tgccgtccga taaccgaacg catcatgtcg
     6841 gcatcggctt tccaagccgg atccaaatcg ctgagtttca aaccgagcag gcggtacacg
     6901 ccgttaaggt cgggcttgcg gcggacaagc tcgacggcgg tttgcgcggc ttctttctcg
     6961 cccttaagca gcagggattt ctcgtacacg acattgatca ggtcaagttc gggaaacgtc
     7021 tgcatatatc ctgtcagacg gttcaagcct tcttcaggtt ttccctgcgc ggcataggct
     7081 tcgtaaagct tctcgccgac catgctcaag tatacatggt tttgctgctc gatggcggca
     7141 taggcttcga cggcggcagg gaaattgcct tgtcggtgtt caatgtcgcc caaaatcatg
     7201 ttggcgcggg tgcatttttt gttggcttcg agtgccttgc cgacattgaa acgcgcggca
     7261 tcgaaattgg acttgaacag cgcggcttgg gcaagttcgc aataaaactg tgcaatctca
     7321 aactgatatg tctgttcgtc gtgactaaga agttgggcgg tttcaaccgc tttttcccaa
     7381 tccctgtcct gctggtagat attgagcagg tgctgtctgg cttcacgcgc catttcaccg
     7441 tcttgcagcc ccaaaaaaat ctgttcggca cgatcgacca aacccgcact ttggtagttt
     7501 tgcgccaatt caaacaggac gcgcgcgcgc ttttcgccga ccgtatcggg agaatcgagc
     7561 attgtccggt gtatgttgat ggctttgtcg ttttcgccgc gctgacggta aagtttgccg
     7621 agggtaaggt tcaaatcata cgattgcggc cggccgtcga cgacttccgc caactccctt
     7681 gccgcgcgcc cgctgttgcg gtcgaccaaa gcgtccaggc ttttataaaa tcccgaaggg
     7741 atgctttttg cctgcttcaa tacggttttc atatccacgc gggcggcaaa ccagcccatc
     7801 gtgaagaaga cgggcaaaag gataatcggc agcaggataa tccacaattc gttgtccata
     7861 tcggctttct taaggctgtt tggcagattc ggcagcattt tgtatcggcg gtgcagtcaa
     7921 tttctgtccg ctcaagcgcg cacttttctt cacttccgca cgcaggcggc tgttttcgcc
     7981 gcgcaaggac agcagccgcc cgaacagggc aaacattccg aacacgatgc cgacgacaaa
     8041 cgcgccgaac aatacgacaa tcagcggcag attgacactc tgccccggaa gataggaaaa
     8101 ggtaacggca tccatattaa tgacggcaag cagcaggaag agcagcagga taatgatttt
     8161 gatgacggta tagataagtt tcatgtttgc tccgtaaata aaaacgccgc acggacagct
     8221 tcgcactctg aaccaagatt gcgttagttt aaacgatttg cacggtttcg gatagaatgc
     8281 ggcagcgtgt tcggacggca tacggagtat gcgattgccg acaattttac caaatacacc
     8341 gctcctttcc atttgaaaaa taacggattg gacaccgcat cgacagaaaa acccgccgcg
     8401 cacttgtcaa aaccctgttt gcaggcgtat ctttacaacc ttcaaattca aaccgttcat
     8461 tgaaacatat cagaataaga aaggctttac atcatgagca gacccgtacc cgccgtattc
     8521 ggcagcgttt ttcacagtca aatgcccgtc ctcgcctacc gcgaaggcaa atggcagccg
     8581 accgaatggc aatcttccca agaccttacc cttgcacccg gcgcgcatgc cctgcattac
     8641 ggcagcgaat gctttgaagg tttgaaggcc ttccgtcagg cagacggtaa aatcgtgctg
     8701 ttccgtccga ccgccaatat cgcgcgtatg cggcaaagtg cggacatttt gcacctgccg
     8761 cgccccgaaa cccaagctta tctcgatgct ttggtcgaac tggtcaaacg tgccgccgac
     8821 gaaattcccg atgcgcctgc cgcgctgtac ctgcgcccga ccttaatcgg taccgatccc
     8881 gttatcggca aggccggttc tccttccgaa accgccctgc tgtatatttt ggcttccccc
     8941 gtcggcgact atttcaaagt cggctcgccc gtgaaaatct tggtggaaac cgaacacatc
     9001 cgctgcgccc cgcatatggg ccgcgtcaaa tgcggcggca actacgcttc cgccatgcac
     9061 tggttgctga aggcgaaagc cgaatacggc gcaaatcaag tcctgttctg cccgaacggc
     9121 gacgttcagg aaaccggcgc atccaacttt atcctgatta acggcgatga aatcattacc
     9181 aaaccgttga cagacgaatt cctgcacggc gttacccgcg attccgtgct gactgtcgcc
     9241 aaagatttgg gctataccgt cagcgaacgt aatttcacgg ttgacgaact gaaagctgct
     9301 gtggaaaacg gtgcggaagc gattttgacc ggtacggccg ccgtcatctc gcccgttact
     9361 tccttcgtca tcggcggcaa agaaatcgaa gtgaaaaacc aagaacgcgg ctatgccatc
     9421 cgtaaggcga ttaccgacat ccagtacggt ttggcggaag acaaatacgg ctggctggtc
     9481 gaagtgtgct gatgctttaa ataaaaaaat gccgtctgaa acccgtttgg cgtttcggac
     9541 ggcattttcg cgttcggacc gtttccgccg cacctgcagc aagtcggtac aaaggcaatc
     9601 ggttaaaaca agcgtccgca tttcccatcc cgcctgccgc aagtcgggca tttccctgga
     9661 aatacgcttc aaacggcaaa ccgccgcccg aaaccgatac tcggcacgga cggcgcacgg
     9721 atttgaaaac ggcggattat ccctcggtgc tcaaggcatt gatgctgtaa ccgccgtcaa
     9781 cataagtgat ttcgccggta atgccggacg acaggtcgga cagcaggaag gcggcagtat
     9841 tcccgacttc ttcgatggta acgttgcggc gcagcgggtt gtgggcggcg acgtgtccca
     9901 agagtttgcc gaaatcggcg atgccggagg cggcgagcgt tttgatcggg ccggcggaaa
     9961 tgccgttgca gcggatgccc tctttaccca gacaggcggc ggtaaagcgg atgcctgcct
    10021 caaggctggc ttttgccata cccatcacgt tgtaattcgg aatcgcgcgt accgcgccca
    10081 agtagctaag ggcgacgatg gcggagtttc tgccgcgcat catcggacgg gcggcttttg
    10141 ccaatgcggg caggctgtat gcggaaattt cgtgtgcggt gttgaacgct tcgcggctga
    10201 tgctgtcgag gaagtcgccg ctcaaggctt ctttcggcgc gaagccgatg gaatgcacca
    10261 aaccgtccaa gccatcccaa tgtttgccta agtcggcgaa cacttggttg atttcgtcgt
    10321 cgctggcgac atcgcagcgg aatacgagtt cggaatctaa ttccgccgcc attttgcgga
    10381 cgcgctcttc cagtttgtcc acaacgtagg taaacgccag ttccgcgccc tgttcgcggc
    10441 aggctttggc gatgccgtaa gcgatggaac gctcggaaat catgccggta atcagaattt
    10501 ttttgccttg cagaaaaccc attttgtatc cttcaaatag tgttcggttc gttctaaacc
    10561 gttgattata gcaaattgtc cctgtttctg tgttttcacg ttgcagcgtg cagacggcaa
    10621 tgccgtccga agcggatttc agacggcatt ggacgtttca aatacggttt aaggcatcag
    10681 atgccgcgca agagttcgtt cacgctggtt ttggcgcggg tttgcgcgtc cacgcgtttg
    10741 acgatgacgg cacagtaaag gctgtggctg ccgtctttgg aaggcaggct gccggacacg
    10801 acgaccgaac ctgccggtac gcggccttgg tagatttcgc ctgtggtgcg gtcgaagatt
    10861 ttggtggatt gaccgatgaa cacgcccatc gaaatcacgc tgccttcttc gacaatcgcg
    10921 ccttcgacga tttcggaacg cgcgccgatg aagcagttgt cttcaatgat ggtgggtgcg
    10981 gcctgcaggg gctcgagtac gccgccgatg ccgacaccgc cgctcaagtg gacgtttttg
    11041 ccgatttgcg cgcaagagcc gacggtcgcc caagtatcga ccatcgcgcc ttcgtcgacg
    11101 tatgcgccga tgttgacgta agacggcatc agcacggcgt ttttggcaac aaagctgccg
    11161 cgtcgggcaa ccgcacccgg aactgcgcgg aagcctgcgt ttttgaactc gtcttcagac
    11221 cagtcggcaa atttggtcgg cactttgtcg aagtatttgt tcacgccgtc gttgaggact
    11281 tcgttgtctt ggatgcggaa ggacagcaac acggcttttt tcgcccattc gttgactttc
    11341 cactcgccca cgcccaagcg ttcggcgacg cgcagtttgc ctgaatcgag ttggcggatg
    11401 gtttccaaca cggcttcttt gacttcgggg gcaacggtgg tcggagtgat gtccgcgcgg
    11461 ttttcaaagg cggtttcgat aatgttttgc aaagacataa tgtttccttg gttcgagata
    11521 tttcgggacg cttgccggta ttgttcagac ggcatggcgg ttggaacaaa cgtgctattg
    11581 tgccatacaa acgcccgccc gtcagccgcg ccgcaggctt gccggatgcc ggcgtttcgg
    11641 aatcgggcgg gcggcaggca tatgtctttt tccgcgcccg aatcaataca gaaaggcggc
    11701 ggtactttta tgccgcgccg ccgcctttca gacggcattc gcggtaaaac gccatcagcc
    11761 cttcggtcga ggcatcgtgt acggacgtgc cgccttccaa ttcgccgatg atggtttttg
    11821 ccaactgttt gccgtactca accccccact gatcgaaggg gttgacgttc catatcgcgc
    11881 cttggacgaa ggttttgtgt tcgtaagccg ccatcagcat acccagattg cagggcgtga
    11941 ggcggtcgag caggatgctg ttgctggggc ggttgccggg gaactctttg tgcggcgcga
    12001 ggcgttcgcg ttccgcttcg ggcaaatctg ccagttcggc gcgtgcttcg tctaaggttt
    12061 tacccttcat cagggcttcc gcttgggcaa aggcgttggc aacggtaaaa cggctgcgtc
    12121 cgtcctccgc gccctgcgcc gtcatcggga cgataaagtc gcagggaatc aggcgcgtgc
    12181 cttggtggag cagttggaaa taggcgtgct ggcagttgac cccttcaccg ccgaacacga
    12241 tgccgcccgt tttgcacgcg gcgggactgc cgtctgaagc gcggcttttg cccaaactct
    12301 ccatatcgag ctggttcagc cacgccggca gcaggcgcag gttgtggctg tacggaacgg
    12361 cggtctgccc gtccgcgtgc tggaaattgt tataccacac ggcaatcagt gccatcagaa
    12421 cgggaatgtt gcgacgcggg ggcgtgtgga aaaaatggct gtccatcgcg tgcgcccccg
    12481 ctagcagttc gcggaaacgc gccccgccaa ccgcaaccat cacgggcaaa ccgacgggcg
    12541 accagacgga atagcgtccg cccacccagt cgtacatcgc aaacacgcgt tccgccgcaa
    12601 tgccgaaact ttgcgccgct tccgtatcgg cagacaccgc gcaaaaatgg cgcgccgttt
    12661 cggattccga gaaccccgca ccgcgatacc acgccttgac cgcctctgca ttgagcaggg
    12721 tttccggtgt tttaaaggac ttgctggcaa cgcaaaacat tgttgtttcg gggttcagac
    12781 ggcataagac ctcatccagg caggcagggt cggcattaga aacaaaatgg acggaaatct
    12841 gccgtctgaa cggctcgagc gcctgcacgc acattgccgg cccgaggtcg gatccgccta
    12901 tgccgatgtg gacaaaatcc gcaatccgtt ttccggttat cccctgatat aaaccgtcgt
    12961 ccaaactgtg tgcaaacttc aacgcacgat ttaactcgcg gcggatttcg ggcaacacgt
    13021 ccctgccgtc cgcataaacg gcatccgcac cgtcgggcag gcgcaaagcc gtatgcagcg
    13081 cggcacgccc ctcgctgccg ttgactttcg cacccgtccg caaagcacgc attttccctt
    13141 ccaaatccgc cgtctccgca agacggcaga gcagttgcag cgtatcttcg ccaaaacggt
    13201 ttttgctgta atcgaacaac atcccgtcca aacgctcatg catacgctca aaacggtcgg
    13261 gttcggcagc aaagcggtcg cgcaaaagga tgtggcacgt atcctgataa tggcgttcga
    13321 gcgcatacca tgcacgggta aaggcatcca tctgttttcc ttgatttttc agaaccggat
    13381 taaaatatag cagaatgtag tctaacaaac ggcagacact ttagcgaatc tcaggaacac
    13441 cgcccgccgc gtccaataac accttatttc catatggcga aaatatagtg aattaacaaa
    13501 aatcaggaca aggcggcggg ccgcaggcag tacggatagt acggaaccgg ttcgcttggt
    13561 gcttcatcac cttagggaat cgtcctcttt gagccggggc ggggcaacgc cgtaccggtt
    13621 tttgttaatt cactataccc tccggccggc atttgacccg caacaatatc ctgcaagatt
    13681 tattgtgtgc gcataaatgc cggacagccg cctaaattaa ggtataatcg catccgattc
    13741 tgtcccgttt gccgcccgca ggcgggatgt cggcggtttt catcttaccg ggaacacgcc
    13801 gatactgttt tttaacgatg tttcttacat tttattccaa ttactttacg gggctagaat
    13861 atggctaaaa atgggggatt ttctttgttc gcaaagaaag aaaaacgctt tatctttgaa
    13921 ggcaggcatt ctgcctccga caaactggtc aacggcgaag tatccgcgtt taccgaagaa
    13981 gaggcacgca aaaaactggc aaaacgcggc atccgcccgt tgcagattac ccgtgtgaaa
    14041 acaagctcca agcgcaaaat cacacaagaa gacattaccg ttttcacccg ccagctttcc
    14101 acgatgatta aagcgggcct gccgctgatg caggcatttg aaatcgtggc gcgcggacac
    14161 ggcaacccgt ctatgacgga aatgctgatg gaaatccgag gccaagtgga acagggcagc
    14221 tcgttgagcc gcgcattctc aaaccacccg aaatatttcg accgcttcta ctgcaacctg
    14281 gttgcggcgg gcgaaacggg cggtgtattg gaaagcctgc tggacaaatt ggcaatttac
    14341 aaggaaaaaa cccaggccat ccgcaaaaag gtaaaaaccg cgctaaccta tccggtatcc
    14401 gtcatcgccg tcgccatcgg tttggtattc gtgatgatga ttttcgtact gcccgccttt
    14461 aaagaagttt acgccaatat gggcgcggag cttcccccac tgacccaaac agtgatggat
    14521 atgtccgact ttttcgtctc atacggctgg atggtgctga tcgcactggg ctttgccata
    14581 tacggcttcc ttaaattgaa ggcgcgttcg attaaaatcc aacggcgtat ggatgccata
    14641 ctgctgcgta tgccgatttt cggagacatt gtccgcaaag ggacgattgc ccgctggggc
    14701 aggacgacgg caacgctgtt tgccgccggc gtgcctttgg tcgatgtatt ggactccact
    14761 gccggcgcgg cgggcaattt aatctatgaa gaagccaccc gggaaatccg tacgcgcgtc
    14821 atccaaggtc tgtctatgac ttcggggatg cgtgcgacgg aactgttccc caatatgatg
    14881 ttgcagatgt cctccatcgg cgaggaatcg ggttctttgg acgatatgct caacaaagcc
    14941 gccgaatttt acgaagacga ggtggacaat gcggtcggca ggctgtccgc tatgatggag
    15001 ccgattatta ttgtgatttt gggcttggtc atcggtacgc ttctggtcgc tatgtatctg
    15061 ccgctgttca acttgggcaa cgtggtcgcc tgatttgccg cacagatccg gcgcggattg
    15121 gttctgcgcc ggtttgtttt tgctttgaat atatcaagga caaaatatgt ctgatttgtc
    15181 tgtattgtcg ccgtttgccg tgcctttggc agcagttttg gggctgctgg tcggcagctt
    15241 cctgaatgtc gtcatttacc gcgtacccgt tatgatggaa cgcggctgga cggtatttgc
    15301 caaagaacat ttaaacctgc cgctgaccga cgatgaaagc cgtaccttca acctgatgaa
    15361 gccggattcc tgctgtccca aatgccgtgt gccgatacgc gcgtggcaga acatcccgat
    15421 tgtcagttac ctgctcctgc gcggcaaatg cgcttcctgc caaaccaaaa tcagcatacg
    15481 ttatccctta atcgagctgc tgaccggcgt attgttcggg ctggtcgcct ggcaatacgg
    15541 ctggtcttgg attacgctgg gcggtttgat actgaccgcg tttctgattt ccctgacctt
    15601 tatcgatgcg gacacccaat acctgcccga ctcgatgaca ttacccttga tctggctggg
    15661 gctgatattt aatttggacg gcggcttcgt gcctttgcag tctgccgttt taggtgcggt
    15721 tgccggctat agttcattat ggctcttatg tgcagtgtat aaactgctca caggaaaaac
    15781 cggtatgggc aacggagatt tcaaactgat tgccgcattg ggcgcgtggc tcggcatatc
    15841 cgcattgccc gtgctgattt ttgtttcctc tctgatcggt ttggtcgcgg caatcgttat
    15901 gcgcgtcgcc aaggggcggc attttgcctt cggccccgca ctgacagttt cgggctggat
    15961 aatttttacg gcaaacgatt ccgtatggcg ggcggtcaac tggtggctga cccatccggt
    16021 gagatgacag catgggtcgg actgaccggc ggaatcggca gcggcaaatc ggcagccgcg
    16081 caatattttg ccgatttggg cgtgccgcgc atcgatgcgg acgcggcggc gcactcgctg
    16141 acggcttcag acggcatcgc cctgccggaa atcaggcggc tgttcggcga caccgttttc
    16201 aacacacagg gtttgttgcg gcgcgacata ttgcgtaaag aaatctttgc ctccccatcg
    16261 cgcaaagcct tgctcgaatc cgtgatgttg ccgctgattt tctcagaaat caaaaaacag
    16321 caagaaacct ttaccgatgc ggtttacggc attgtcgaaa ttccgctgct gacggagaag
    16381 cgtcaattta tcagcctgat acggcgtgtc ctgaccataa gcgcaccttt ggaaaaacgt
    16441 atcggcaggg taatggcacg cagcgggctg acgcgcggcg aggtcgcgga catcatcagc
    16501 catcaggcat ccgaatccga acgcctgctg cttgcagacg atgtactgct caatgacggc
    16561 agcctcaaaa gcctacgtga gaaaacaatg ctcctgcacg cgttttattc agggattttc
    16621 gcctcaaaac caacacaagg aaaacacaat ggctgaatcg cggcaaacac gccttcaagt
    16681 caaatgtccg acctgtcaaa cggcagtagt atggaaaccg gaaaacgcat tccgcccgtt
    16741 ctgttcgcaa cgctgcaaac tgatcgactt gggcggatgg gcagacggga aatatacggt
    16801 ttccggccaa acggaaagtt tgccggaaat atccgaaccc gacggggcat accgctgacc
    16861 gccccgcctt cccggcaaac accctgaaag gtcaaatgcc gtctgaaaca aacacgcttc
    16921 agacggcatt ttcattctca aacctaatcg ttggtatttg ccgttacctc ttccaatgaa
    16981 gtaatgccct gcataatttt caaaataccg gcccggcgca aatccaccat accctcctta
    17041 taggcaacgt ccaaaatacc cacttccgta ccgttgttca taatcacacg ctgcatttct
    17101 tcgctgatgg gcataacctc atacacgccc gcacgcccct tataaccctg cccccggcaa
    17161 cggtcgcaac cgacggcgcg gtaaagtttc caatcttttg caagatcctc atcggtgaaa
    17221 ccgacttcct tcaaagcaga ggcagacggg cgttccactt cctgtttgca gctcgaacac
    17281 agcctgcgta aaagacgctg cgccataatc aggctgaccg aactggcaat attaaacggc
    17341 gcgacaccca tattcagcat acgcgacaac gtcgccggcg cattattcgt gtgcagtgtg
    17401 gaaaacacca tatgccctgt ttgtgccgcc ttaatcgcaa tatcggcagt ttccaaatca
    17461 cgaatctcac cgaccataat gatgtccggg tcctgacgca ggaaagactt caaagcagcg
    17521 gcaaaagtca gaccctgctt atcattgacg ttaacctgat tgatgcccgg caggttaatc
    17581 tcggcagggt cttccgccgt tgcaatattt accgactccg tattcaaaat attcaaacag
    17641 gtatagagcg acaccgtctt acccgaaccc gtcgggccgg ttaccagcac catcccgtaa
    17701 ggacggtgaa tcgcttccaa caacaatttt ttctggaacg gctcaaaacc gagctggtcg
    17761 atgttcaaag acgcggcatc ggaattcaaa atccgcatca cgaccttttc gccaaacagc
    17821 gtcggcaatg tgctgacacg gaaatcgaca ggcttgccgc ccttttgaaa ggtcagctgc
    17881 atcctaccgt cctgcggtat ccgtttttcg gaaatgtcca aacgcgacat taccttaatc
    17941 cgggaagcaa gctgccccct taccgcaatg ggcggctgaa ccacctcgcg gagctgcccg
    18001 tccacacgga aacggatacg cgcattgtgt tcgtaaaact cgaaatggat gtcggatgcc
    18061 ccgctacgca aggcatccga caaagtttta tggataaacc tcggaacagg gccgtcttct
    18121 gcctcctcgt tgtcgatata cagggtgtgg ctttcctctt cctcttgccc ctccccaagc
    18181 tcctgaagca gcgatgtcga acgcgaaccc acccaatcga gcaaacccgc caactggtca
    18241 tcctcgacaa tgaccaactc aaccgcaatc cctgcggcag aaacggtttt ctgaatttgc
    18301 ggcatctggg tcggatcgga aaccgcaaaa aatactttgt cgccccgacg gaaaaccggc
    18361 acacagtgga actccaccat ctgctcctcc gtcaacaccc ccatcagcac cctgtggcgc
    18421 ggataatgac gcaaatcaag aatcgaataa ctgaacaccc tcgcaatcaa tgccgcaagc
    18481 gacttgggcg aaatgacacc gtctgaaaac agcatcggca acacttcctt acccgcctgc
    18541 gactcattgt agtaatgctc ggcctgctca acagtaacca cctggttttg aaccagaatc
    18601 ctcagcaaac ctacgctcat acgaccttat ccccaaattt attcattgtt atacctgtac
    18661 agattttatc ataaaacaac agatttccaa gcctgaacat cttttacgaa gcctgaaaat
    18721 catttcacga ttctgccgtc ctaaaggtcg gtttttcaag caggaagaaa aagttttcag
    18781 atggcaaaaa agccctccag cactgaaagg ccttatatcg gaaacttccc gcaacacggg
    18841 aaacagacaa atgcaaaccg tcaaacctcg ccaacaggaa tcgaacctgt attttacgct
    18901 taggaggcat acgttctatc cgttgaacta tggcgagccg aaatgaaaag ggagatttta
    18961 aacctttccg gcaacaaaag acaagatgtc ggccgcaatc agcggcccga cagggatacc
    19021 gcccataaat gccaccccga tgaccgtacc gatcagcaag cccgttacca ataccggctg
    19081 ccgtcccatc aaaggcacgc cgcatcccgc cagccaagcc acgaaaatac cgataaaaac
    19141 ggcggatatc attttaaaat tcaaaaattc ggcaacagga ggaacctgcg cctttcctga
    19201 aaccaacgga ctcaaaaccc ctatggtcaa aagaatgata ccgaggttca acccgtgctt
    19261 ctcgaccaac gggacaaact gtaccaatgc cgtctgctgc atcagcagca atatggttgc
    19321 cgagacggta atcgaattgt tgttgctgac cacccccaac agaatcagcg taaccagaaa
    19381 caggggaaca aaactgaaat tcatcggtta cgacaccctg accaaagatt ccttcgccag
    19441 ctgaatcata gcatccttca cttcgctgtc ggacagggca tccaacgcgg caacggcaca
    19501 atcgactgct ttgcgcgcct cgcctatcga atatgccaaa gcatccgaac ggacgacata
    19561 atcgcggatt ttttcaaaat agccgcgatc tgcattttcc aaagcagtac gcacatcgtt
    19621 cgcaacctgt tcggaaccct gacgcatcag ataaatcaaa ggcagggtcg gttttccttc
    19681 cgccaaatcg tcgccgacgt ttttacctgt ttcttcggtt tcccccgaat aatccagcac
    19741 atcgtcaata atctggaatg ccgtaccgac gtacataccg tagtctttca aggcctgttc
    19801 gtgcccgggg gaagctttgc ccaaaattgc gccgacttga gcggcagctt caaacaattt
    19861 tgccgtttta tattggatga ctcggatata ttgttcttcg gtaatgtccg tattgccgat
    19921 gttcatcagc tgcatgacct ctccctcggc aatgatgttg gtcgcatccg ccatcacttc
    19981 caaaacgcgc atactgcccg aggcaaccat cagttgaaat gcacgggtat ataaaaagtc
    20041 gccaaccaac actgccgccg cattgccgaa cagattgttt gccgttgccc gtccacggcg
    20101 caaatcgctt tcatcgacga catcgtcgtg caggagtgtg gaagtgtgga taaactcgac
    20161 catcgctgcc agcgaataca gtttctcgtc atcataaccg accgccttac ccgccaaaat
    20221 cgtcataatc ggacgcaggc gtttgccgcc cgcgctgatg atatatgtac cgatttgcga
    20281 aatcagtgcg acatcggatt gcaccgcacg gttgatgact tcattgactt tggcaaggtc
    20341 ttcaggcaga tgtcgctgga aatagggcag attctcgagc atggcagact ctcaggttta
    20401 cgtttccgtc aaacggcaga taccgcttga aagctgattc aaatagcggg caattatatc
    20461 agcaaagcca tcagggtaca tcttttcaga cggcatatga ttgcccgaac cgcgcaaact
    20521 ttgacaaaac aggcaaataa caatacaatg cccaatttcg cacaatggtg tgcggatatt
    20581 aaccataacc cttatggagt tgagtatgta cgcggtcgta aaaaccggcg gcaaacagta
    20641 taaagtttcc gtcggcgaaa aattgaaagt agaacagata ccagcccaac tcgacagcca
    20701 aatcgaactg accgaagttt tgatgattgc tgacggcgaa tctgtaaaag ttggcgcacc
    20761 ctttatcgaa ggtgcaaaag taacggctaa agtagtggca cacggtcgtg gcgaaaaagt
    20821 ccgcatcttc aaaatgcgcc gccgcaaaca ctaccaaaaa cgccaaggcc accgccaaaa
    20881 tttcacccaa atcgaaatcg tggcaatcgc ctaaccttaa aacttaggag cattacaaat
    20941 ggcaagtaaa aaagcaggcg gcagcacccg caacggtcgc gattcagaag ccaaacgctt
    21001 gggcgttaaa gcctacggca acgagctgat tcccgcaggt tccatcatcg tacgccaacg
    21061 cggtaccaaa ttccacgcag gcgacaacgt aggtatgggc aaagaccaca ctttgttcgc
    21121 caaaattgac ggttatgtcg aattcaaaac caaaggcgcg ctgaaccgta aaactgtcag
    21181 catccgtcct tacaccggtt ctgaagaata attcaaccga tacctgaagc cgcatctttt
    21241 cacgatgcgg ctttttacat accccatacc cgatttgata cacattaagc tgaaagtaaa
    21301 aatccgcata caccctcccc tgcatatttc ttcaacaacg ggttttgata taatcgccta
    21361 tctgttacag atagttcaaa cggcattcaa acccttacaa atgccgtctg aaatcatcgg
    21421 catccgccta tgcaaaggat attttatgag tttacacagc gacatcctcg tcgtcggcgc
    21481 aggcccggcg ggtttaagtt ttgcagccga acttgccggc agcggtttga aagttactct
    21541 gatcgaacgc agcccactga ctgttctgca aaatcctccc tatgacggac gcgaaatcgc
    21601 cctgacccat ttttcccgcg aaatcatgca gcgtttgggt atgtgggaca aaattcccga
    21661 aaacgaaatc taccccttgc gcgatgccaa agtgctgaac ggacgttccg actaccagct
    21721 ccactttccc caaccgactg aagcgcgcgg cgagcctgcc gactgtttgg gctatctgat
    21781 ttccaaccac aatatccgcc gcgccgccta tgaaatcgta tcacaactcg acaatgtcag
    21841 cattctgacc gatacggccg ttaaagaagt caaaacatct gataatgaag cgcaagtctt
    21901 tttggaaaat ggagacattc taaccgcgcg tctccttttg gcagcagaca gccgtttctc
    21961 acaaacccgc cgacaactcg gtatttcttc agatatgcac gactacagcc gaaccatgtt
    22021 cgtctgccgc atgaaacata ccctttccaa ccaacatacc gcttacgaat gcttccatta
    22081 cggacgcacc atcgcactgc tgccactgga aaagcgcctg accaataccg tcattacagt
    22141 cgataccgat aaaatcaaca gcgttcaaaa cctttcgccc gaagaattgg cggcaagcgt
    22201 aaaagaacag ctcaagggca ggctcggcga catggaactg gtcagcagca tccaccatta
    22261 cccccttgtc ggcatgattg ccaaacgttt ctacggcaaa cgcagcgcgc tgatcggcga
    22321 tgcggctgtc ggtatgcacc ccgtaacggc acacggcttc aacctcgggc tttccagcgc
    22381 ggatattctg gcaaaactga tactcgaagc cgaacagcgc ggtcaagaca tcggcgcggc
    22441 ttccttgttg gaaaaataca gcagcaaaca tatgctgcac gcccatccgc tttatcacgg
    22501 caccaatatg atgctgaaac tgtttaccaa cgaaaccgcg ccggcaaaac tgttgcgcgg
    22561 tttggtatta cgagccggca acaacttccc gccgctgaaa aagctgatta ccaaacaact
    22621 gaccggttga aaactgccga aatgccgtct gaaacgtttc agacggcatt tttgtattat
    22681 gaaccgtttt gcggtttcca tatccttggc agacggtttg cagcagattc gcatacggca
    22741 gatgtttcaa gcagaaagga aacacaataa aaataaaaaa gcctccgaac agtcggaggc
    22801 tttgctttca aactgaaatt atttcagttt ggtttctttg tacactacgt gtttgcgggc
    22861 aaccggatcg aattttttga tttccagttt gccgggcata gtgcgtttat ttttggtagt
    22921 ggtgtagaag tggccagtac ctgcaccgga ttccagtttg attttatcgc gcattgcagt
    22981 aatccttaat taaatagtgt ttaaattaag cttcgccgcg agcacgcaaa tcagccaata
    23041 cgacatcaat gcctactttg tcgatggtac gcaatgcagc gttggaaacg cgcaggcgaa
    23101 cccagcggtt ttcactttct acccaaaaac gacgtgattg caagttgggc aaaaaacggc
    23161 gtttggtttt gttgttggcg tgcgatacgt tgttgccgga catcgggcgt ttaccggtca
    23221 ctttgcaaac tcgtgccata atcagtctcc aaacttctaa aatagtaaaa cgcgatttat
    23281 accacgaaaa acaatgccgt ttcaagtgtt ttaaagaaaa acagatgttt tgcgcgggta
    23341 agccgcccga gtgccgcatc tgcggaacgt ttgcaggtgc gaaacagatg gggcgcgatt
    23401 atagcggatt tcgggagctt ctgcattcaa aatgccgtcc gaacatattt ccagtatttt
    23461 cagacggcat ttcaagtttt caaatccctc aatgtccacc gccgccgctg tggaacggcg
    23521 gtttcgccag ccagacaatg ggaatcagga cgataaacaa aatgctgccg gcgaggaata
    23581 tttcgttcga tccgatgatg aagccctgtt gcgtaatggt attgttgatg atgcctagag
    23641 tttgaccgtc ggaaatgcct tgttgggaca aatgcgccgc cgtttcgtgc aatgttgcgg
    23701 aatagggcgt gatgtgttcg gcaaaacgcg tgtggtgcaa cgcttcgcgc cgttcccaca
    23761 gggtgctgac gacggatacg ccgacaccgc ccatcagcac gcgcaggaaa ttcgacaggc
    23821 tgccggcggc ggcaatctgt ccgcccttca tgtgcgacag tgtgatggtg gtcagcggca
    23881 ggaagaacat ggcaacgcct accccctgcc aaaactgcgg ccagatgacg ttgccgatat
    23941 ccatgtcggc ataaaaatca gtgcgccaat aaaaagtgaa ggcaaaggtc aggaagctgg
    24001 cggttacgag caggcgcata tcgattttat tgccgaacct gccgattaac ggagatagga
    24061 agacggggag gatgccgacg ggcgcggcag caagccctgc ccacgcggag gtatagccca
    24121 agttggtctg caacactaac ggcagcaggg tcagcgtccc catatacacc atgaaaccca
    24181 acgaggtggc aattacgccg acggtaaaat tccgatcttt aaacagcgat aaatcgacaa
    24241 tcggatattt ttctcccaat tcccaaacaa taaaatacga caagcacacc agtgcgacta
    24301 cgcccaaggt aatgatttct ccagaggcga accagtcaag ttccttaccc ctgtccagca
    24361 tcatctgtaa cgcgccgata ccgaccatca tcagcgtcag cccgacatag tcggtcggcg
    24421 ttctgacggt tgccgtttcg cggtgtttca aatgtttcca tgtaatccat gccgatatga
    24481 tcccgatggg gatattaatg aagaaaatcc aaccccaatg ccagtttccg gaaatccaac
    24541 cgccgagtat cggcccgagg acaggggcga caacgacggt cattgcccac aatgccagtg
    24601 ccagcatccg ttttgcgggc ggataggatg ccattaacag gctttgcgac aggggaatca
    24661 acggcccggc gataaagccc tgcaaaatgc ggaaaacaac cagcgactga aggttgggcg
    24721 cgatgccgca cagccacgat gcgatgacga aaccggcggc ggcggcggta aacaatttga
    24781 cctcgccgat acgttttgcc aaaaagcccg tcagcggcac ggaaacggcg tttgccacgg
    24841 aaaaagaagt gatgacccac gtcccctgcg tggttgccgc accgaggttg ccggcaatga
    24901 cggggacggc gacgttggcg atggtcgtat ctaaaacctc cataaatacg gcaagcccca
    24961 aagacagcgt aacccacgcc aatgccgcac ccttaagcgg tggataatcc attgtgtcct
    25021 ccgtttcaga cggcatcagg gcgcggattg cccgaggatt tcatcgaccg tccgatcgac
    25081 ttccgaccag tcggtacttt ccatttccgg caatgccgca cccggcgttt ttgaaacagg
    25141 cgcgcctgcg gcggaagtat ccactttaac cgtcatcgac aaaccgatac gcaacggatg
    25201 cctgtccaca tcttcgcggt tcagcacgat acggacgggg acgcgctgca ccactttaat
    25261 ccagttgccc gttgcgtttt gcgccggaat cagcgaaaac gcgctgcccg tacctgccga
    25321 aaaccctgcc accctgccgc gataaacaat ttgtttgccg tacaaatcgg acaccagctc
    25381 ggcaggctgt ccgattttca tatgccgcaa ctgcgtctct ttaaaattgg catccaccca
    25441 cacatccgac agcggcacca ccgccatcag cggcgcgcct gccgccacct gctgcccgac
    25501 ctgcaccgaa cgcttcgcca cctgaccgtc cgccggcgcg cggacttgcg tccgccgaag
    25561 gttcagccac gcatctttca acctgccgat tgccgtctga acctccggct gttcgcgcaa
    25621 agaaacatct ccgcccaaag ccgcgcgtgc cgaagattct tccgccaaag ccgccttaac
    25681 cgccgcctgc gcctgagaca ctgccgtacg ggcgtgtgcc agctcttcgg cggacaccgc
    25741 acccgattcc gccaaagcgg accggcggcg caaatcatcc tgcgcgcgcg ccaaatccgc
    25801 acggcgcaag gcaacctgcg cccccgcctg cgaagtggcg gcattttgcc ggcggttttg
    25861 gcgcaccgcc tgaaccaact cgttttttgc ccgctcgtaa gccagcacat cattatcgtc
    25921 atccaacacc gccagcacgt cgcctttttt cacggcatcc gtatcgtcgt gcaaaacctt
    25981 ccgcaccgtg ccgccctttt gcggcgtaac ctgaaccacg cgtccggcaa cataagcgtc
    26041 ttccgtttcc tcttcgtgct gccaccataa aaaaaacgcc gatccggcgg ctgcggcgga
    26101 aagcgcgaac agcagcgtca atgccgtcag gcggcgtttg cgtttgactt gcgtgttttg
    26161 aagttttgtt tcgtctgtgt gcgcttccat aagattgggt tccgaatttc ctgatttcat
    26221 ataaacaata ttctttcaat aggaaataga ttttatatcc gcgcaataac gcaatcaagt
    26281 cagtatttta gatgcaatat tcaaaaaaca acgcttcagg cggcaaaact gaaaatatat
    26341 ttcgtttata tatgacatgg caaacaccgc cgcccgcacc atgccgtctg aagaaaacta
    26401 cacaaatacc gccgcttata ttacaatcgc cgccccgtgg ttcgaaaacc tcccacacta
    26461 aaaaactaag gaaaccctat gtcccgcaac aacgaagagc tgcaaggcat ctctcttttg
    26521 ggtaatcaaa aaacccaata tccgaccggc tacgcgcctg aaattctcga agcattcgac
    26581 aacaaacatc ccgacaacga ctatttcgtc aaattcgtct gccccgaatt caccagcctc
    26641 tgcccgatga ccgggcagcc cgacttcgcc accatcgtca tccgctatat cccgcacatc
    26701 aaaatggtgg aaagcaaatc cctgaaactc tacctcttca gcttccgcaa ccacggcgat
    26761 tttcatgaag actgcgtcaa catcatcatg aaagacctca tcgccctgat ggatccgaaa
    26821 tacatcgaag tgttcggcga gttcacaccg cgcggcggca tcgccgttca tccgtttgcc
    26881 aactacggca aagcaggcac agagtttgaa gcattggcac gcaaacgcct gttcgagcac
    26941 gacgcacaat aaaccatcct tcccatattt cagacggcat tccttcgata cggtatgccg
    27001 tctgaacgcc tttccgaaag gtttttatgt acgcattgac cgccgcacag caacagaagg
    27061 cactcttccg gctggtgctt ttccatatcc tcatcatcgc cgccagcaac tatctggtgc
    27121 agttcccctt ccggattttc ggcatccaca ccacttgggg cgcgttttcc tttcccttca
    27181 tcttcctcgc caccgacctg accgtccgca ttttcggttc gcacttggcg cggcggatta
    27241 tcttttgggt gatgttcccc gcccttttgc tttcctacgt cttttccgtt ttgttccaca
    27301 acggcagttg gacgggcttg ggcgcgctgt cccaattcaa cacctttgtc ggacgcatcg
    27361 cgctggcaag ttttgccgcc tacgcgctcg gacaaatcct tgatattttc gtattcgaca
    27421 aattacgccg tctgaaagcg tggtggattg ccccggccgc atcaaccgtc atcggcaatg
    27481 cactggacac gttagtattt tttgccgttg ccttttacgc aagcagcgat gaatttatgg
    27541 cggcaaactg gcagggcatc gcttttgtcg attacctgtt caaacttacc gtctgcaccc
    27601 tcttcttcct gcccgcctac ggcgtgatac tgaatctgct gacgaaaaaa ctgacggccc
    27661 tgcaaaccaa acaggcgcaa gaccgccccg tgccctcgct gcaaaatccg taaaacagct
    27721 ctgtagggaa tcgggacggt tgggttttct tttatttgca aacactgccg gaacggataa
    27781 atccggattc ccacccactt cgtcattccc gcgaaagcgg gaatccggtg cgttggggtt
    27841 cagtcatttc cgataaactc ctgccgcatt gtatttctag attcccgctt tcgcgggaat
    27901 gacggcggat gggtttccgt gccgtggtgt ccggattccc gccggtacgg gaatgacggc
    27961 agcgcttcct tggcttagtt ttattttaag ccactataaa tgccgtctga aaacctgttt
    28021 gcagattttc agacggcatt gttttcgtcg ccggttcaaa cttcaatccg attgcgacac
    28081 ggtaaccggt atgccgcgca agcgcgcaag cagcgcgtcc gccttctgtt tctgcgcggc
    28141 aaacgccgct ttgtccgcct gcgtcaattc gggtgtcggc aatgcgaccg aaacaggatt
    28201 gacgggctgc ccgttgatgc gcgcctcgta atgcaggtgc ggcccggtcg aacgccctgt
    28261 cgaaccgaca aaaccgatga cctcgccgcc gcgcacattg ccttgtgcct gcgaaaacgc
    28321 gctcaagtgc gcgtacagcg tttccacacc gttggcgtgg cgtatcatca ccgcgttgcc
    28381 gtatccgccc ttccggcctt taaaggtaat cacgccgtcg gcggaagccc tgaccggcgt
    28441 tccctgcggt gcggcataat cgatgcccgt gtgcagccgc catgtgtgca ggatggggtg
    28501 catacggtag ccgaacggcg aagaaatgcg cgtatagacc agcggctcga tgttgaagcc
    28561 gcctttttcc tgcaacaccc tgccgtcttc atcgtaataa ttgccgcccc ctccgccttc
    28621 cttgtccgaa cggtaataga acgcctgatg ggttgtgccg cccttgacaa cttccgccgc
    28681 caaaatatcg cccgccgcca cctgctgccc gtggaaatac aggctgtcgt aaagcaggcg
    28741 cacggcatcg ccttccttca aaccgtcaag gctgaagcgg ccggcaaaaa tcccgcttaa
    28801 ggattcgcgg atttcgacgg gcacttccgc ccgcgccagc gaaccgcgcg ccgacgtttt
    28861 gaccacgacc gaacgcagtg tcggcaaaac cttcatatcc gcatcagaag ccgaccgccg
    28921 ccatatgccg cctttttttt ccaaagcgac cagattgcgc tcgccgtctt cgtcggtaaa
    28981 aaactgcact tcgcgcgcac tgccgtcgcc gccgaccaaa acatgaaccg actggtcggc
    29041 acgcaaatgc cgcaaatcgg cttcgccgcc atatttttcc gtgattcggg caatctcgtc
    29101 ccgcgccata cccgaacgcg ccagcacgtc cgccagcgag tcgcccggct gcaccgcctc
    29161 ctgcacccaa tatgccgtct gaacgccgct gccgccccaa gacagcggcg gcagtttttg
    29221 ttccacgcgc tgcggtctga cgcgctccgt cccctctgtc gaagcaatgt atgccgccga
    29281 caccagaata atcgaaacgg caagcgcgcg cagcgcgtat ttccgatgtt ttgccgaaag
    29341 tgggaagaca gccatattgt tcctttttga cggcgtttgc gccgaatcct ctataatatc
    29401 cgcccgatcc tcatttgtca ggcatcaaac gatgaaactc accctcgccc tcccctcgct
    29461 caatttggat gaagacgaaa tccgaatacc tctatgcctg cccgccttca acaaaatcct
    29521 gcaatacggc tcgccgcacc gccaaagctg cacggcttcg gcattttacg cacgttattt
    29581 gtggtgcgga agactggcac aacgcccggc gcaaagcctg aatatgccgt ctgaaaccgt
    29641 cgcgctcgcc acgcccgtct ggcaaaaaat ggggctgcat caggcaaatg tgctgacggc
    29701 ggaatatttg gatgtcggta cggatgaagc ggaacggctc tgccgcgatc tgtcggcgtt
    29761 ttacggcgac attccgtggc gtttcgttcc cgtcctgccc gaattatggc tggtttccct
    29821 tccccgcgcg taccgctggg gcgcgaagcc cgttttggac ttgggcggac tgttgggcgc
    29881 ggacgatcag ccggacgggg aagacgcgtt ggaatggctg cgcgtccaaa ccgaaatcca
    29941 aatgtggctg aacgctcacc ccgtcaacca caaccgcaaa aaacgcgggc tgcccgaatt
    30001 gaacggctta tggctttggg acagtctgca cggaagcgca caaggcggca cgcttttcgc
    30061 cgatacggtt tggagccgtt ttcacccgaa ccgccgagca ttgcccgaca gcttccgagc
    30121 ttatgcggaa acggcggcac acctgcccga tacgcaccac atcctgttta tggacgattt
    30181 gcgcctgacc gccctgacag gggacaggga gcggtatgcg gcaatattgc agcagtggga
    30241 agaacgctgg ttcgcaccgc tttacgaagc cgtccgcacc ggcaaaatca aacggctgga
    30301 catcgccacg gacggacaac acggcggtac gctgaccttc aaacccacag acaggcggaa
    30361 gttttggcgc tgcacgaaaa cctttgacgg aatctggtaa acccgcccgc cgcaaccgcg
    30421 acaatgccgt ctgaagcccg aatcgggttt cagacggcat tttaccccgc atcgccgtta
    30481 tgccggaaaa accggaatac gtttccgcac acgcggcggc acgcaaaaca ccgcccgaaa
    30541 gccgccgatg cccgccgtga caccgccgcc ggcagggttt ccgccgaaaa ggaacagcaa
    30601 tcagaacgtt ttgttaaact cgacaaacgc cctgtttttc tcgtattcgt taaacacatc
    30661 gttgctccac gtttcgcggt gcgacagcgt caggcgcggc gtgatgcctt tgaaatgcaa
    30721 tgcccggtgc caaaggctca aggatgtgtc cgattcttta tccctgcgcc tttccccttt
    30781 aaaactgctg aagaagccgg gtttttcata atgccgtttc gccacgccga ggcggaacag
    30841 cgaagacagg ccgctgccgc cccattcctg cccccaggca aagcgcaggc cgtaacggtt
    30901 gaaattgtcg ccacggtcgg cggggttgcg ctcgcggtaa aaatccaaac cgcccgtcca
    30961 atattggcgc gcattccggt aaaacaccag cgaattggaa atttgcaaat gggtattgtc
    31021 ggaacgcgcc cggcgcgtat tcttcaaacg cccccactcc gccgaagaca gcgtttgcca
    31081 tctcggggtt tgccaacggt tgaaataaag gcgtgcgccg ttggcgtaag aataagcgtc
    31141 gttgccgtag gtgcggcgtt cgtggaacac tgccagcccg acatctttac gccggtcggc
    31201 aaaaccgatg ccgccggaaa cacctgccgt catatcgttg aatttcttat tccccggata
    31261 aaccctgccg gacacgtcgc cgcccgccgt cgtgtaccag ccgtttttca gcgaccattt
    31321 tttctccgcg ccgaaccggt aattgaccgc cgtgccgtcc acctgtttcg ggaaagtcca
    31381 attgccgtac tgctgctgtt tcggggcttg gttgatattg tgttcgcggg taacgctgag
    31441 accgccgttt accttccacg catcgcgttc gcgcaatgcc ttgcggtaca gctcgacctg
    31501 ctccataagc tgcggcggca gatcttctgt tttcaggcgg tcgaactggt ctgccgccgc
    31561 ctcgttctgc ctgtcttcaa acaatgccgc cgccaaacgc atacggacgg cgggcgcgtc
    31621 gggttgggcg gcaatcaatt cccggtaatg ggaaaccgcc tccttcaccc tgccctctgc
    31681 ctgcgccaaa atccctgatg cataaagtgc caacatctta tcctgccgcg cctgttgtag
    31741 gtaaatcggc aaaatcacgc ggataccggc aatattgttt gagaccactg cggaatacat
    31801 ggcacgcgac aacaattcgg gatttttcag cagggtttcg ccgtcaacct gcaaaacttt
    31861 tcctttttcc cgcacctgcc ccggtacctt ctccctgtcg atcggtttga cctccgcttc
    31921 atgaagcctg aactcgggac ggcttctcaa atccggttcg cgcggtgttt cttcggcgta
    31981 tgccgcgctt gccaataaag gcagcagcat ccatctgttt cgtgcaggca taaatgtctt
    32041 cccacaaaaa taaaaataaa aaataaccat tatcaaccgg cggattgtat cagtttttta
    32101 tgccgctgtt ccaaaccctg ccgcccgatg ccgcgacaat gccgtctgaa gccagaatcg
    32161 ggtttcagac ggcggcaaaa aaccggcggt tttccgccgg tttcatcatt atgccccgcc
    32221 cttcggggcg gcagggttcg gatcggtttg cggggcggcg cacggggccg tgcaggtgtg
    32281 ccgcctgtgt gtcaaaacat ttcccggcgc atcaaaacaa ccatttgacc gacaatgcgg
    32341 cttctttgtc gccgtccgtc cttttgccgt atccgatgcg tgcggacata tggcctttcc
    32401 aaccggcttc aatgccaaac cgcccttcga gcgccgtcct gcctgccggc gtctgttttt
    32461 cgccgtccat ttccatgccg aaagattttg acctgtgcaa aacattaaaa gcggcaaaag
    32521 gctgaagatt gacaccgtta cgcaaagcaa aacgggtttt tgcccgaatg ccggcgcgga
    32581 tttgccactg accgctgccg agcagcccga ccgccgcccc tcgctgtcgg taaagccgcc
    32641 gtttacgccc aagtaggtaa actgcgcctg cggttgcagg taaaactgca tattactgcc
    32701 ttatatattg cgtccctaag aaggggcgat taacaaaaat taacgcccct tcttagggac
    32761 gcaatatata aggagtgagt acctgttctt ctattaaaaa attaatcttt tgaggcattt
    32821 tctgttgaag tttattaaac acatcttcag aaattccaaa ctgctttatt atctcttccc
    32881 taacccgttt tttattttct tcccaagcct cgggtcttgt tttgtataaa tcctgtaatt
    32941 gctttttaac tgcctgcttt aaatcagttc ggtaattatc tgtaatattg atttcgtcat
    33001 acaaggcttc agatgatttt tgatcggttt taccgctgga gaaataatgg aaaacaccgt
    33061 ttgccggctt gtctgaaaat gaaaaatcgg cagtatcgcc aacatttgta ggacgagtat
    33121 ccgaaccggg ctgataactg aaagcaccga agcaatcaaa agacacactg cacgggccgc
    33181 gccaaacgtg ggaatttctg tcttccgccg cttctaaaat aaatttgttt ttaatctcgg
    33241 cttctttgac gggatcgtac gcatccgaac cccaagcata tggcgtgcaa aacagcgata
    33301 aaacagataa tgttaataga ttaacccgac cgcttgcttg cttgctttca gtgtcatgag
    33361 aaattttcct ttgtcaagtg ttaaagttat aatgattata tactatatca cactacatcg
    33421 caatgaaaaa tcgggaaaaa caaaaaaccc ctccgccgtc attcccgcaa aagcgggaat
    33481 ctagaatttt aatgcggcaa gaatttatcg gggatggccg gggtttaaag gtctgggttc
    33541 ccgcctgcgc gggaatgacg gtttagaaat cacccgaaac gagaaaaaga accgaaaccg
    33601 gacaagtcgg attcccgcgc gggcgggaat gacgataagc gtaatttcaa tccgccatat
    33661 tgtcttttca cttgcctgaa aacagatttc agccgcctat ccctgcatcc ggcggctgat
    33721 gtagtcggca atcaaatccc gcttttccca aaaaaacttc tgcatttttt gttcggaata
    33781 cagtttgcgg accagagtgg gcagaccgct gtggacgatg gcggcgattt ctttgttgcc
    33841 ttcttcttcc tgcattgccg tctgaaaatc caaacccctg cctttcagat atgctgcaag
    33901 gcggttgcgg atgtgtgaat tgagttcgat ggatttgagc attttgcctc cgttttgcgg
    33961 taaggattta ttcgatttgt ttatccgcct gattttatca cgtttcccaa gcggtttgcc
    34021 tgtacaatac cgcttttcgg aagggtgtgg gcgatgatgt tttcttggtt caagctgttt
    34081 cacttgtttt ttgtcatttc gtggtttgca gggctgtttt acctgccgag gattttcgtc
    34141 aatatggcga tgattgatgc gccgcgcggc aatcccgagt atgtgcgcct gtcggggatg
    34201 gcggtgcggt tgtaccgttt tatgtcgcct ttgggtttcg gcgcggtcgt gttcggcgcg
    34261 gcgataccgt ttgccgccgg ccggtggggc agcggctggg ttcacgtcaa actgtgtttg
    34321 ggcttgatgc tcttggctta tcagttgtat tgcggcgtgc tgctgcgccg ttttcaggat
    34381 tacagcaatg ctttttcaca ccgctggtac cgcgtgttca acgaaatccc cgtgctgctg
    34441 atggttgccg cgctgtatct ggtcgtgttc aaaccgtttt gacggagcat cttatgccga
    34501 tagaaatcga acgccgtttt ttgattgaaa cgacaaatgg cggcaatacg ccgatgagcc
    34561 gctgctgctg aaacagggct acctgtctgt tgaaaaagaa cgcaccatcc gcatccgcat
    34621 tgccggaaaa cgggcgtggc tgacgctgaa aggctatatt tcggaaatca gccgcagcga
    34681 gttcgaatac gaaatcccgc ttgccgatgc ggaaaagatg atggaaacga tgtgcccgtt
    34741 taagatggaa aaacggcgtt atccggtcag atggggcggc agcctgtttg aagtcgatgt
    34801 tttccttggc gaaaactcgc ctttggtcgt cgcggaaatc gagttgcccg ccgaaaatgc
    34861 cgattttgac cgtccggact ggctggggcg cgaaatcact tcagacggta tgtttaccaa
    34921 tgcctatttg agcaaacatc cgttctcaag ctggaaaaat gccgtctgaa gcggcttcag
    34981 acggcatctg ccttgcggtt atcccttgag gtaatgcacg aatgtatatg caacgccttt
    35041 gctgctgaca cggcgttccg tccgctctgc ttctttccaa tgcgtccggt ctatttctgg
    35101 gaaaaatgca tctccttcca cagacaaatc cacttcggtt atccgcaaat cggtcgctaa
    35161 tggcatcgct tgtccgtata tctgcgcgcc gcccataatg acggcttctt ccgcgccggc
    35221 gcacaatgcc aatgccacct ccaaacttgc caccgtttcc gcgcctgccg cgcaataatc
    35281 cgcctgccgg ctgatgacga tgttcctccg tccgggcagg ggtttgacgg gcagggattc
    35341 ccacgttttc cgccccataa tgacgggttt gcccaaggta tagactttga aaaatgcgaa
    35401 atcttcgggg atgtgccaag gcatagcatt gcccgccccg atgcacaggt tttccgcaca
    35461 cgccgcaatt atggttattt tgagcatatt ttctccacaa aaatgccgtc tgaacgcttc
    35521 agacggcatt ttatgacatt ctgcgtcaaa aatctcaacc tgcgcgcgcc atacgttttg
    35581 tgttcgcacc cgccaacaat gccaacaatt cttcagtcgc gccccaaccg atacacgcat
    35641 cggtaatgct cttgccgtac acttccggct tgtcctgcct gccttcgacc aaatggcttt
    35701 ccaccatcac gcccatgata ttgccgccgt cctgttccaa ttggtcggca atgtcttgtg
    35761 ccacttccat ctgccgggtg taatccttgc ggctgttggc gtggctgcaa tcgatcatca
    35821 gcttgtcggt tacccctgcc gcacgcagtt gttccaccgc ctcgctgacg tgtcccgcat
    35881 cataattcgg ctcttttccg ccgcgcaaaa tgacatgaca gtcgggattg ccgccggtat
    35941 ggacaatggc ggaatgcccg gccttggtta cagacaagaa atgatgcgaa tggctcgccg
    36001 caccgattgc gtcgatcgca atcttcaaat tgccgtccgt accgttttta aagccgacgg
    36061 ggcaggacag accgcttgcc aattcgcggt ggacttggct ttcggtcgtc cgcgcgccga
    36121 ttgcccccca agaaatcagg tcggcataat actggggtgt aatcatatcc aaaaattcgg
    36181 tagaggcagg catgcccata ttattcaggg acaacaacag actgcgcgcc tgacgcaaac
    36241 cgaaattgat gtcgaacgta ccgtccaaat gcgggtcgtt aatcaaacct ttccaaccca
    36301 ccgtcgttct cggcttctcg aaataaacgc gcatcacgat caaaagctcg ttttcatacc
    36361 gcttgcggag tttcaacaga cgttccgcat attccaacgc cgctttcgga tcgtgaatcg
    36421 aacacggccc gataatgacc aacagccgcc tgtccctgcc gtgaaccaaa tcggaaattt
    36481 cctgacgggt gcggtgaacc aagcccgaag cctctttgga aatcggcagc tcgtaaagat
    36541 gggcaatcgg cggcaacaac tctttaactt ctttaatctt aatatcgtct gtggggtaat
    36601 ggtgtatcat cttgcatctt tcctgatggg tttttatacg ctgcttaggt tacatcgttt
    36661 accttgcaca aacaagtgca acatattact acaa
//
LOCUS       DAXGCP010000011        32468 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.011, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000011 DAXGCP010000000
VERSION     DAXGCP010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32468
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.011"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(153..950)
                     /gene="truA"
                     /locus_tag="ACFJCW_000475"
     CDS             complement(153..950)
                     /gene="truA"
                     /locus_tag="ACFJCW_000475"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HFC4150712.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGVPTVQAALETALARI
                     AGESVATTVAGRTDTGVHAAAQVVHFDTTAARPQQAWVRGVNAHLPEGIAVLHARQVA
                     PGFHARFDASGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAALLVGEQDFS
                     SFRAAGCQAKSPVKTIYRAGLTQSAGLIRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPGAYGIVRPQIPEWL"
     gene            1617..1742
                     /locus_tag="ACFJCW_000476"
                     /pseudo
     CDS             1617..1742
                     /locus_tag="ACFJCW_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(1792..2256)
                     /locus_tag="ACFJCW_000477"
     CDS             complement(1792..2256)
                     /locus_tag="ACFJCW_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150713.1"
                     /translation="MKRFILPVLLSATTALASPIVGTWHCIGTDENIHSDTKVKYLQD
                     GSFRGDAILKIDDDGNILAYRVVGEGKWRFANNALTQSQIKYGEVSRQHSPETLAWLE
                     KSEDARLLESMMYTGLVAQMDKPGKDDVYQLDKSGKLVSEDGTSREACTKVE"
     gene            complement(2333..5170)
                     /locus_tag="ACFJCW_000478"
     CDS             complement(2333..5170)
                     /locus_tag="ACFJCW_000478"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HFC4150714.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFRPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     DLGREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDGVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESMEEQGSMWHIRYPLADNPTEAVIVATTRP
                     ETLLGDAAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLINVFDLEAKVLANAEVFNFKGEAQPGFSLPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKPHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGSEPDNEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQAEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKAVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIGLDKLLMKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGHSFPDMWIIGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPETDGGEIVQTAFGQ
                     MTVLQDLIGAVRNLRGETGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEARQVAAL
                     PESGDAPVAVCNGARLMLKVEIDKAAETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQNQLAKLKD"
     gene            complement(5275..6534)
                     /locus_tag="ACFJCW_000479"
     CDS             complement(5275..6534)
                     /locus_tag="ACFJCW_000479"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HFC4150715.1"
                     /translation="MKVLVLGAGVAGVSSVWYLAEAGHEVTVIDRTEGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKRLFKSHPPLLFRPDGGLYQIEWLWRMLQNCTATRYQ
                     INKERMVRISEYSREMFRRFEAQTDMNFEGRKKGTLQIFRQTEEVEAAKQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIVGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     YFNQTISRIDHNGLRIKAVETETGRFETDAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYETKLPEKRRETLAL
                     VVNDLFPEGGDLSQALSWSGLRPMTPDSTPLIGRTRFENLFLNTGHGTLGWTMSPGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQKL"
     gene            complement(6613..8004)
                     /locus_tag="ACFJCW_000480"
     CDS             complement(6613..8004)
                     /locus_tag="ACFJCW_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC4150716.1"
                     /translation="MQVFLDNLKAFFETVSSWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGAGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIVINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPELSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAALYRVGYVSSVMPGTVLSLDLVWLASDTFNGLMALPNLTALLLMAKVIVNETR
                     DFKQKITNGELPH"
     gene            8204..8350
                     /locus_tag="ACFJCW_000481"
     CDS             8204..8350
                     /locus_tag="ACFJCW_000481"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150717.1"
                     /translation="MGMWRAAEIINAADCHTFEIYSGLNLNRYGVASPCRTSCTVCGF
                     VALS"
     gene            complement(8467..9243)
                     /gene="lpxA"
                     /locus_tag="ACFJCW_000482"
     CDS             complement(8467..9243)
                     /gene="lpxA"
                     /locus_tag="ACFJCW_000482"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HFC4150718.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVRIGANTEIGPHA
                     VINGHTTIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVVGNHTIFANNASLAGHVTVGDYVVLGGYTLVFQFCR
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFQDFFAQSTRGIIR"
     gene            complement(9286..9966)
                     /locus_tag="ACFJCW_000483"
     CDS             complement(9286..9966)
                     /locus_tag="ACFJCW_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Abi family protein"
                     /protein_id="HFC4150719.1"
                     /translation="MERYKNAVRKDKAAELYLLNLSLSRELFHVVSIFEIVLRNKIDI
                     CFRQEFKDRNRLYDSIQPQTNPALKYQGCFLRNGTKESAELIKVALSKIQNNSGGKFD
                     HNQLVAGLGFGFWRYLFAGGKDAQFDAAGKVLMKVFPKKPKSTPSVQYNQKWIFRELS
                     NINNFRNRLAHHEPICFKGAIKDTGYARNIYQSIFELLNYMDVDTASVFSHFSDQVIA
                     VCDEIDKL"
     gene            complement(10173..10622)
                     /gene="fabZ"
                     /locus_tag="ACFJCW_000484"
     CDS             complement(10173..10622)
                     /gene="fabZ"
                     /locus_tag="ACFJCW_000484"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HFC4150720.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAVIMCAKRVV"
     gene            complement(10658..11701)
                     /gene="lpxD"
                     /locus_tag="ACFJCW_000485"
     CDS             complement(10658..11701)
                     /gene="lpxD"
                     /locus_tag="ACFJCW_000485"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HFC4150721.1"
                     /translation="MIPATCTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAIIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANAYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRHVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGDDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHIAGIFPMSEHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDSKDTQ"
     gene            complement(11734..12234)
                     /locus_tag="ACFJCW_000486"
     CDS             complement(11734..12234)
                     /locus_tag="ACFJCW_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HFC4150722.1"
                     /translation="MTRLTRAFAAALIGLCCTAGTHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDGEFSARQDELQKLQREGLDLERQLAGGKLKDAKKAQAEEKWRGLVEAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQDVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(12300..14678)
                     /gene="bamA"
                     /locus_tag="ACFJCW_000487"
     CDS             complement(12300..14678)
                     /gene="bamA"
                     /locus_tag="ACFJCW_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HFC4150723.1"
                     /translation="MKLKQIASALMMLGISPLAFADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSDRFDRQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDIYGKAFDPRKASTSVKQYKT
                     TTAGGGVRMGIPVTEYDRVNFGLAAEHLTVNTYNKAPKRYADFIKQYGKTDGADGSFK
                     GLLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMLGGEVGIAGGYGRTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGRTYTAAENGNNKSVYSENAH
                     KSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(14735..16075)
                     /gene="rseP"
                     /locus_tag="ACFJCW_000488"
     CDS             complement(14735..16075)
                     /gene="rseP"
                     /locus_tag="ACFJCW_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HFC4150724.1"
                     /translation="MQTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARTGFQSGDKIQSVNGVSVQDWSSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPIASWQEWANLTRQSPGKKITLTYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTVEWIRGKPLGERVQNIGLRFGLALMMLMMAAAFFNDVTRLIG"
     gene            complement(16110..17345)
                     /gene="ispC"
                     /locus_tag="ACFJCW_000489"
     CDS             complement(16110..17345)
                     /gene="ispC"
                     /locus_tag="ACFJCW_000489"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HFC4150725.1"
                     /translation="MPSENASDGIRYKVILIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAAQCQTFRPEYAVVADAEHAARLEALLKRDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAAGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAIFQVLPRDYTDRLNEHGIDSIILTASGGPFLTTDLSTFDSITPE
                     QAVKHPNWRMGRKISVDSATMANKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGKLDFGALSALTFQKPDFGRFPCLKF
                     AYETINAGGAAPCVLNAANETAVAAFLDGQIKFTDIAKTVAHCLAQDFSNGMGDIEGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(17350..18147)
                     /locus_tag="ACFJCW_000490"
     CDS             complement(17350..18147)
                     /locus_tag="ACFJCW_000490"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HFC4150726.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALTALWEYA
                     RMAGLCKTETNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAVMPLWLRFKWRLN
                     GGWQVYAVGWLLLMPFWFALVSLRPHPDDALPLLAVMGLVWVADVCAYFSGKALGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAIMSVLN"
     gene            complement(18150..18896)
                     /locus_tag="ACFJCW_000491"
     CDS             complement(18150..18896)
                     /locus_tag="ACFJCW_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HFC4150727.1"
                     /translation="MKSSTQTILEHTAIPRHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDET
                     ALDAAVASFQKRERRFGRTSEQLPIGQQRN"
     gene            complement(18952..19509)
                     /gene="frr"
                     /locus_tag="ACFJCW_000492"
     CDS             complement(18952..19509)
                     /gene="frr"
                     /locus_tag="ACFJCW_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HFC4150728.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYIAEADKVLAAKEEDLMAV"
     gene            complement(19651..20643)
                     /locus_tag="ACFJCW_000493"
     CDS             complement(19651..20643)
                     /locus_tag="ACFJCW_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4150729.1"
                     /translation="MKIISLFSGCGGLDLGFEKAGFEIPAANEYDKTIWATFKANHPK
                     THLIEGDIRKIKEEDFPEEIDGIIGGPPCQSWSEAGALRGIDDARGQLFFDYIRILKS
                     KQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMANAKDYGVAQERKRVFY
                     IGFRKDLEIKFSFPKGSTVEDKDKITLKDVIWDLQDTAVPSAPQNKTNPDAVNNNEYF
                     TGSFSPIFMSRNRVKAWDEQGFTVQASGRQCQLHPQAPKMEKHGANDYRFAAGKETLY
                     RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTLER"
     gene            complement(20648..21484)
                     /locus_tag="ACFJCW_000494"
     CDS             complement(20648..21484)
                     /locus_tag="ACFJCW_000494"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoPII family restriction endonuclease"
                     /protein_id="HFC4150730.1"
                     /translation="MNIIDAIINLANNPVVGVESHSQSNNRANQAGDALEEYVKDLFS
                     GSFNLNETQRIARHAKVFSYLGNNSNPPDAMLRNGDAIEVKKIESKDSALALNSSHPK
                     SKLSVDDSMLTKACKDAEKWEEKDIIYIVGVVDKKKNLKHLAMVYGIDYCADAECYLK
                     IKNQIKEGIGNIGGIQFAETKELGRVNRIDPLNITYLRVRGMWGIENPWFVFNYIYQR
                     NMEKSFNFMAIINEDKWNSFNNTDKLLAIQDSKLAISDIKIKNPNNPARLRNAKLITY
                     HL"
     gene            complement(21593..22720)
                     /locus_tag="ACFJCW_000495"
     CDS             complement(21593..22720)
                     /locus_tag="ACFJCW_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HFC4150731.1"
                     /translation="MNSSQRKRLSGRWLNSYERYRHRRLIHAVRLGGAVLFATALARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTIGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWLDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLADCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPSMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTAALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(22790..22865)
                     /locus_tag="ACFJCW_000496"
     tRNA            complement(22790..22865)
                     /locus_tag="ACFJCW_000496"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(22830..22832),aa:Thr,seq:cgt)
     gene            22972..23451
                     /locus_tag="ACFJCW_000497"
     CDS             22972..23451
                     /locus_tag="ACFJCW_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150732.1"
                     /translation="MFVNEKYPYATLFAGLVFLTLPFALAVHDAFACAFGRAGLLVSV
                     SDGGFGRRGGWDGTVWFVFGVLAFLNVVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAVAWIFKLLLGSAALGGLSGEAVSEYAFAVWLVSMLTLPKRLTRAPVQPVVFHRKK"
     gene            23546..24169
                     /gene="rsmG"
                     /locus_tag="ACFJCW_000498"
     CDS             23546..24169
                     /gene="rsmG"
                     /locus_tag="ACFJCW_000498"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HFC4150733.1"
                     /translation="MERKERLRAGIAAMGPDISETAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPYIEGAQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLRQAAIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTAHLLKDG
                     GYWAAMKGVYPQGEIGRLPQDVCVEKVQRLDVPGLDAERHIVILSKR"
     gene            24269..25042
                     /locus_tag="ACFJCW_000499"
     CDS             24269..25042
                     /locus_tag="ACFJCW_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC4150734.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVQSAAVRSKEGGYGVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
     gene            complement(25789..26373)
                     /gene="rnhB"
                     /locus_tag="ACFJCW_000500"
     CDS             complement(25789..26373)
                     /gene="rnhB"
                     /locus_tag="ACFJCW_000500"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HFC4150735.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPETFDLPGLTDSKKLSE
                     KKRDALAEMIKEQAVAWHVAASTPEEIASLNILHATMLAMKRAVYGLAARPEKIFIDG
                     NRIPEHLGIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRRPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQALF"
     gene            complement(26441..28336)
                     /gene="mnmG"
                     /locus_tag="ACFJCW_000501"
     CDS             complement(26441..28336)
                     /gene="mnmG"
                     /locus_tag="ACFJCW_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HFC4150736.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRSQA
                     DRILYKASIREMLENQENLDLFQQAVEDVTLEGERISGVITAMGAEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELKLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIEGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVRGQDPLLLRREQAYLGVLVDDLITKGLNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAVEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSENLSAEVIEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPDGIDYGRVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
     gene            complement(28509..29936)
                     /locus_tag="ACFJCW_000502"
     CDS             complement(28509..29936)
                     /locus_tag="ACFJCW_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC4150737.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDCDNHHFRGGPAYYITHGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVNQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
     gene            30095..31087
                     /gene="pdxA"
                     /locus_tag="ACFJCW_000503"
     CDS             30095..31087
                     /gene="pdxA"
                     /locus_tag="ACFJCW_000503"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HFC4150738.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKHLLRA
                     RAEALGKSVVLRDFDPESGGAHGEGGLEVLHIPAAEAVEAGWLNPANAAYVLQLLDTA
                     LAGISDGIFDGIVTAPLHKGIINAARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLR
                     VALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGH
                     LGHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKY
                     HSFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            complement(31317..>32468)
                     /locus_tag="ACFJCW_000504"
     CDS             complement(31317..>32468)
                     /locus_tag="ACFJCW_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HFC4150739.1"
                     /translation="PTAAPEKKTSWWDSFKAWLKRIFGGSETQAVPAAETSEKRSTAN
                     RSGSRANNRRRNPRRSKREGSKIEVREAAGKTAGQKARADKAETRNNGNRRRNERGDR
                     ATERANEAEIQSRNVQPAAPVADAAPPETEGQTGKRRRNGSRNERGQTAPETAAVAET
                     AVQTAENTPPEPYTAEDKGSKPKSERNRRERDSRDAKERRERNNQRDRRQNGKKRNIP
                     SAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPLIATPVQTASSAVSNG
                     DALIYDAAEKIRRAAADILPEGAAPKAAAQEMPSETATFTAAAEQARETAQTGGLVLI
                     ETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEAATVPAEEMIQVETRQG"
BASE COUNT         6466 a         8283 c         9646 g         8073 t
ORIGIN      
        1 cgcccaagca ccgggcgaac cggttccgta ccatttgtac tgtctgcggc ccgccgcctt
       61 gtcctgattt ttgttaatcc actatagtgt caacattgaa aaagattgcc tgacagtttg
      121 tccgatttca aaatctccgc gacaagaatg ttttaaagcc attcggggat ttgggggcgg
      181 acgatgccgt atgccccggg atagtcgacg ccggtcaggt aaagcccgtc gggcatgaag
      241 gtcggtgggg ctttgaggcg gctgcgttct tgaatcagtg cggcgaagcc ttcgacgctg
      301 agcctgccgc tgccgacata aacgagcgcg cccatgatgt tgcgtaccat gtggtgcaaa
      361 aaggcgttgc cgtgcaaatc gaggcggatc agtcctgcgc tttgggtaag cccggcccgg
      421 tagatggttt tgacggggga ttttgcctgg cacccggcgg cgcggaagct ggagaagtct
      481 tgttcgccga ccaataaggc ggcagcccgg cgcatcggtt cgatgtcgag tttgaggtgt
      541 gtccagcccg ccctgttttt caacagcggc gaacggacgg gggcggattc gagcaggtag
      601 cggtagtgcc gtccggatgc gtcgaagcgg gcgtgaaatc cgggtgcgac ctgtcgggcg
      661 tgcaaaacgg caatgccttc gggcaggtgg gcatttacgc cgcgcaccca tgcctgttgg
      721 ggacgggcgg cagttgtgtc aaagtggacg acttgggcgg cagcgtgcac gccggtgtcg
      781 gtcctgccgg caactgtggt ggcgacagat tctcctgcga ttcgggcgag tgcggtttcc
      841 aatgccgcct gaacggtcgg tacgccgccc gcctgtttct gccagccgta aaagcggctg
      901 ccgtcgtagg atagggttat tgcccagcgt tgtttttgtg cggtatccat cgggtttggg
      961 attcggataa atgttcagac tgcattgtat cgcagatttt gcagggaaac ggcaaacgcc
     1021 cggggcgcgc agcgttgttt ggggagttgt tcgggggttg gatgcagttg ctacgaatcg
     1081 ctatcctgtg aattcaccct gtcaggagtg cccgaaccgt cattcccgcg caggcgggaa
     1141 tctaggatgt ggaatctaag aaaccgtttt atccgataag tttccgcacc gacaggtctg
     1201 gattcccgcc tgcgcgggaa tgacggcggc ggattcggcg gagttggtgg atttggcggg
     1261 ctgaagcccg cccttgtata tcggaacttc cgtatcatag cgacaaaccg cccggccgcc
     1321 acccgcgccc gcccaaggca gacaaccgtt gcgtagctca gggagcggca gggcaaccca
     1381 tcggcacaac cggacagttg ccggacaaca caaccgaatg caaggcaggt tgatgatgag
     1441 tacccgatac cattacgcag gtatagcgga ttaacaaaaa ccggtacggc gttgccccgc
     1501 cccggctcaa agggaacggt tccctaaggt gatgaagcac cgggcggatc ggttccgtac
     1561 catttgtacc gtctgcggcc cgccgccttg tcctgatttt tgttaatccg ccatacaagg
     1621 gtaagccgta taaggttgcc gttacggcat gtatgcgcaa actgccgacg atatcgaatg
     1681 cccggatgcg tgattatttt gccgcaaacg ataccgccga aaacggtatt cggacggctt
     1741 gatttgagtt ttggtatttt tgcccgacgg ggtggaaaat acagttgctt ttcactccac
     1801 tttcgtacat gcctcacggg aagttccgtc ttcggacact aatttgcctg atttatccag
     1861 ttgatacaca tcatcttttc cgggtttgtc catctgcgcg accaatccgg tgtacatcat
     1921 gctttccaag agtcgtgcat cctccgactt ttctaaccac gccagcgttt cggggctgtg
     1981 ctgtcgtgaa acttcaccgt acttgatttg gctttgagtt aaggcattgt tcgcaaaacg
     2041 ccatttacct tcaccgacaa cacggtatgc caagatattg ccgtcatcat cgattttgag
     2101 tatagcatcg ccacggaagc tgccgtcctg aagatatttg acttttgtat cactgtgaat
     2161 gttttcatca gtgccgatgc aatgccatgt accgacaatc ggagaagcca aggcggttgt
     2221 tgcggataaa agcaccggca gaataaagcg tttcatctat ttcctttttt aaaggaggcc
     2281 gtctgaaaac cccggtttca ggttttcaga cggccttgtc tattcaatca aatcagtctt
     2341 tcaacttcgc caactgattt tgcacttttg ccattttgtc ttccaattcc gccaaatcgg
     2401 ctttgtcttt ttccaccaga tgcgccgggg ctttttcggt gtagccgggt ttggagagtt
     2461 tggcattgag tttgtccaag gctttttgca gcttctcggc ttctttgctc aaacgggcgg
     2521 tttcggcggc tttgtcgatt tcgactttca gcatcaggcg cgcgccgttg cagacggcga
     2581 cgggcgcgtc tccgctttcg ggcagggcgg cgacttgccg tgcttcggtc aggcgggtca
     2641 tcatcggcag gtatttgagg tagtccgcca agtcgtccgc gctttcgaca aacagcgggg
     2701 ctttcacgtt gggctggatg cccgtttcgc cgcgcaggtt gcggactgcg ccgatcaaat
     2761 cctgcaacac ggtcatttgc ccgaatgccg tctgaacaat ctcgccgccg tcggtttcgg
     2821 ggaagcgggc gagcatgatg ctgtcggcgg ttttggcatc gcacatgggg gcgacggttt
     2881 gccacagttc ttcggtgatg aacgggataa tcgggtgcag caggcgcagg gcggcttcga
     2941 gtacgcgcaa taaggtatgg cgtgtggcgc gctggcggct ggcgcagccg gtttggagct
     3001 gcactttggc gagttccaga taccagtcgc aataatcgtt ccatacgaag ctgtacaggg
     3061 tttccgccgc caaatcaaag cggtaggttt cgtaggcttg cgtaacctgc tcgatggtct
     3121 gattcagacg acctatgatc cacatatcgg ggaaggaatg gccgcgcggt tcggcagcgg
     3181 ttgcgccgta gccgcagtct tggttttcgg tgttcatcaa gacgaagttg gtggcgttcc
     3241 agattttgtt gcagaagttg cggtagcctt cggcgcgttt gaagtcgaag ttaaccgaac
     3301 ggcccaagct ggcgtagctc gccatggtga agcgcaatgc gtccgcgccc atgctgggga
     3361 taccttcggg gaagagtttt ttcgtggctt cttccacttt cggcgcggtt tcgggtttgc
     3421 gcaggccggt cgtacgtttc atcagcagct tgtccaagcc gataccatcg atcaaatcca
     3481 cagggtcgat gacgttgcct tcggatttgg acattttttt gccttcgtgg tcgcgcacga
     3541 tgccgtggat gtacacggct ttaaacggta ctttgccggt gaagtgggtg gtcatcataa
     3601 tcatgcgcgc cacccagaag aagatgattt catatccggt aaccaagacg ttggacggca
     3661 ggaaggcttt gagctcgtcg gtttcagacg gccagccgag cgtggagaac ggcacgagcg
     3721 cggaggagaa ccatgtgtcc aatacgtctt cttcgcgggt caaacctgtt ttgccggctt
     3781 gtttttcggc ttcagcctga ttgcgggcga cgtaaacatt acctgcttcg tcgtaccacg
     3841 cggggatttg atgcccccac cacagttggc gcgaaataca ccagtcttgg atgttgttca
     3901 tccattggtt gtaggtattg acccagtttt cagggataaa gcgcaccgcg ccgctgtcga
     3961 cggctttttt ggctttgtcg gcaaggctca agcctttgaa ttcgttgtca ggctcgctgc
     4021 cgttcggtgt ggcggacatg gcgacaaacc attggctggt cagcatcggc tcaatcactg
     4081 aacctgtgcg gtcgcctttc ggcgtcatca gcgtgtgcgg tttgatttcg accaagaagc
     4141 cttgctcctg caaatcggca accatttgtt tgcgcgcggc aaagcggtcc aagcctgcgt
     4201 atttttcagg cagggaaaag cctggttgcg cttcgccttt gaagttgaac acttcggcgt
     4261 ttgccagcac tttggcttct aagtcgaaca cgttaatcag gcgcgtgtcg tggcgtttgc
     4321 cgacttcgta atcgttgaaa tcgtgcgcag gcgtgatttt cacgcaaccg gtaccgaagt
     4381 ctttttcaac gtattcgtcg gcgataaccg gaatggtgcg accggtcagc ggcaggatta
     4441 attctttgcc gattaagtgg gtgtaacgtt catcttctgg attgacggca acggccgcgt
     4501 cgcccagcaa cgtttcagga cgggtggtcg ccacgataac ggcttcggtg ggattgtcgg
     4561 ccagcggata gcggatgtgc cacatagagc cttgttcttc catgctttcc acttccaaat
     4621 ccgataccgc cgtgccaagc acgggatccc agttcaccaa gcgtttgccg cggtaaatca
     4681 agccctgttc atacaggcgc acgaacactt cggtcacggt ttcggcgcgt acgccgtcca
     4741 tcgtgaaata ctcgcgcgtc cagtcggcgg agcagcccac gcggcgcatt tgctgggtaa
     4801 tcgtgccgcc ggaaacttct ttccattccc acactttttc caagaatttt tcgcggccca
     4861 agtcatgacg ggacacgttt tgcgcggcaa gctgacgctc gaccacgatt tgcgtggcga
     4921 tgcccgcgtg gtcggtaccg ggaatccagg cggtgttgca gcctttcatg cggtagtagc
     4981 gggtcaggcc gtccatgatg gtttggttga aggcatgacc catgtgcagc gtgccggtta
     5041 cgttgggcgg cggcagttgg atggaaaaag acggtttggt caaatccata tcgggccgga
     5101 aatagccttg gctttcccag ttttgatagt gtttggattc gatttcggcg ggggagtatt
     5161 tgtctaacat atgaagccct gagaaataag atgatttgat ggtttgaatt atagcgcaaa
     5221 tgccgtctga aacgctttcg gggtttcaga cggccttaaa tttaaatatt gcctttacag
     5281 tttttgatag cgcgacaggc tcaaatcgtc gctgcggatt tcggtgtctt tgccgctcac
     5341 gatatcggcg gtcaattttg ccgaacccgg cgacatggtc cagcccaaag taccgtgccc
     5401 ggtattcaga aacaggtttt caaagcgggt gcgcccgatt aacggcgtac tgtcgggcgt
     5461 catcggcctg aggccgctcc aggacaatgc ttggctcaaa tcgccgcctt ccgggaacaa
     5521 gtcgttgacg accaaagcca aggtttcgcg gcgtttttcg ggcagtttgg tttcgtagcc
     5581 ggacaattcc gccattccgc cgacgcggat tctgttgtca aaacgcgtga tggcgacttt
     5641 gtagctttca tctaaaacag tggacaccgg tgcgccgtcg gaatttgtga ccggcagggt
     5701 caaggaatag cctttgacgg gataaatggg cagattgaga tccaactgcg ccaacacagt
     5761 cctgctgaag cagccgagcg cgcagacaac ggcatctgtt tcaaaccgcc ctgtttcggt
     5821 ttcaacggct ttgatgcgca gcccgttgtg gtcgatgcgg ctgatggttt ggttgaagta
     5881 gaaccgtacg cccttctctt gacacaattt gtacaggttt tcggtgaaga ggcggcagtc
     5941 gccggtcgca tccgcaggca ggtgcagacc gccgacaatt ttggcggtaa cgcgtgccag
     6001 cgcaggctcg aattctgcgc attcttcggg cttcagacgg cggtacggca cgccgtagcg
     6061 ttccaaaacg gcaatgtctt gttttgccgc ttcgacttct tcggtttggc ggaaaatctg
     6121 caacgtccct tttttgcgtc cctcaaaatt catgtcggtt tgcgcttcaa aacggcggaa
     6181 catttcacgg ctgtattcgg aaatcctgac catgcgctct ttattgattt gatagcgcgt
     6241 tgccgtgcag ttttgcagca tccgccacag ccattcgatt tgatacaggc cgccgtcagg
     6301 gcggaacagt aaaggcggat ggcttttaaa cagccgtttc agtgctttgg tcggaatacc
     6361 gggtgcagcc caaggcgtgg tatagccgta agaaagctgg cctgcattgg caaaactggt
     6421 ttccatcgcc acaccctcgg tgcggtcgat gaccgttact tcatgtccgg cctctgccag
     6481 ataccacacg gaggatacgc cggcaacacc cgcacctaaa acaagcactt tcatgtttcc
     6541 ccctccggct ttttcaaaac aggcttaata tgccgtgccg tctgaatatt cggattcaga
     6601 cggtctcgga tattaatgcg gcaattcgcc gtttgtgatt ttttgtttga agtcgcgtgt
     6661 ttcattgacg atgactttcg ccatcaacaa aagcgcagtc aggttgggca atgccatcaa
     6721 gccgttgaat gtatccgaag ccagccatac caaatcaagg ctcaacacgg tacccggcat
     6781 gacggaagaa acataaccga cgcggtacaa agcggcaaac ttctcgccga agacgtaaac
     6841 cgcgcatttc tcgccgtaat aacaccagcc gagaatggtt gagtaggcaa agaaaatcag
     6901 gccgatggtc acaatccagc cgccgatgcc gggcagcatt ttttggaaag tgacggttgt
     6961 cagcgccgcg ccgctcaatt caggtttcac aaactcgccg cctgcgccga gcagacccat
     7021 gaccaacacg ataccggtaa tcgagcagac aacaatggtg tccaaaaaag taccggtcat
     7081 ggaaaccaaa gcctgacgaa cggggtggtc ggttttcgcg gctgcggcgg caataggcgc
     7141 agaacccata cccgcctcat tggagaacac gccgcgcgcc acgccgtagc ggatgaccgt
     7201 accgatagcg ccgcctgcta cggcctgcgc gctgaacgca tcggagaaaa tcagcttgac
     7261 ggcaggcatc agtgcatcgg aattaatgac gataatggaa agaccgccca acacataaaa
     7321 caccgccata gcaggcacga tgaaagaagc ggctttggcg atgcctttaa taccacctaa
     7381 aacgacaacg gcagtcagaa cggtcaacgt aatgccggta taggcaggtt cgataccgaa
     7441 gctggtttgc acagcctgtg caaccgagtt ggactgcacc gagctgccga taccgaagga
     7501 agcgaatgtg ccgaacagcg caaatgcaac ggccatccat ttccagtttt tgcccaagcc
     7561 tttttcgatg taatacatcg ggccgccgga catttcgcct ttggaattgt tgacgcggta
     7621 tttcaccgcc aacacgcctt cgccgtattt ggtggccatg ccgaaaatag cggtcatcca
     7681 catccaaaat accgcgcccg ggccgccggt taccactgca gtcgccacgc cggcgatgtt
     7741 acccgtaccg atggtggcgg acagcgcggt catcaacgcc gcaaaatggg aaatatcgcc
     7801 ttcgtggcct gcgccgcctt catacttctt tgacggcaca aacgcctgtt tcagcgcata
     7861 gcccaacata gtgaactgca agcctttcag cataacggtc agcacaatgc cggtgccgac
     7921 cagcagcatc aacataacag atccccaaac ccagctgctg acggtttcga aaaaggcttt
     7981 gagattgtct aaaaatactt gcatggcttt ctcctttgtc tgttttattt ttaaaacacc
     8041 acttttgtag tgtccggtaa tttcagcaca gaatattcaa taagacaata tgttcttttg
     8101 aaaaatactt ttggtttttt caccgaagac aggccggttc aagctgcgga aattgtttgc
     8161 aattatttaa aagcagaggc ggaggtcaca atgaaatgtc cgaatgggga tgtggcgggc
     8221 ggcagaaatc atcaatgctg ccgactgcca tacttttgaa atctatagtg gtttaaattt
     8281 aaaccggtac ggcgttgcct cgccttgccg tacttcttgt actgtctgcg gcttcgtcgc
     8341 cttgtcctga tttaaattta aaccactata caaaatgatg catcgatcaa acaacatacc
     8401 gctttaaaaa aaaccgatgc cgtctgaaac gctttcgggg tttcagacgg cattgaaagg
     8461 gtgcggtcag cggatgatgc cgcgcgtcga ttgtgcgaag aagtcttgaa atacggcaag
     8521 ctcggcttgg gtttcggcgc ggcggagaat gtccgccttg gcttcttcaa acggaatgcc
     8581 gcgatggtag agggttttgt atacgtcttt gacggcggaa atctgttctg cggtaaaacc
     8641 gttgcggcgc ataccttcgc tgtttaggcc ggccggttcg gcgcggtagc ccgatgccat
     8701 aaagtagggc ggcacgtctt tgtgtacgcc tgcggcgaag gcggtcatgg cgtagtcgcc
     8761 gatgcggcag aattggaaga ccagcgtgta gccgcccaaa acgacgtagt cgccgacggt
     8821 aacgtgtccg gcaagcgagg cgttgttggc gaaaatggtg tggttgccga ccacgcagtc
     8881 gtgcgcgagg tggcagtacg ccataatcca gttgtcgtcg ccgatacggg tttcgccgat
     8941 gccggttacc gtgcctaaat taaaggtggt gaattcgcgg atggtgttgc cgttgccgat
     9001 aatcagcttg gtcggctcgt cgcggtattt tttgtcctgc ggaatttcgc cgaggctggc
     9061 aaattggaaa atgcggttgt tttcgccgat ggtggtgtgg ccgttgatga cggcgtgcgg
     9121 accgatttct gtattcgcac cgattcggac gttggggccg atgacggtgt acgcgccgac
     9181 tttgacgccg gagtcgagtt cggctttggg gtcgatgacg gcggtcgggt ggatgagggt
     9241 catgttttga atactccgct gcttgttaag acaaataata gaaaatcaca gtttgtcgat
     9301 ttcatcgcag accgcaatca cttgatcgct aaaatggcta aatactgaag cagtatctac
     9361 atccatgtaa ttaagcagtt caaaaataga ttggtaaata tttctagcgt agccggtatc
     9421 ttttattgca cctttaaaac aaatcggttc gtgatgtgcc aaacgattac ggaaattgtt
     9481 aatattggaa agttctcgaa aaatccattt ttggttatat tgcacacttg gtgtagattt
     9541 gggctttttt ggaaaaactt tcatcaatac ttttcctgca gcatcaaatt gagcatcttt
     9601 ccctcccgca aacagatacc gccaaaaacc gaatcctagt cctgcaacca attggttgtg
     9661 gtcaaacttt cctccgctat tattttgtat tttagataat gcaaccttga ttaattcagc
     9721 agattctttc gtaccatttc ttaaaaagca accttgatat ttcaatgcag gattcgtttg
     9781 tggttgtatg ctatcatata accggtttct gtctttaaac tcctgccgaa agcaaatatc
     9841 aattttgttt cttaaaacga tctcaaatat agaaacaaca tgaaaaagtt ctcttgataa
     9901 agataaattc aataaataca attcagctgc tttgtctttc ctaacggcat ttttataccg
     9961 ttccattctg aaatcagaaa aaatactaca gcattcctta taattcacgc taacccttga
    10021 ttctttattt ttaaattgac gtttcaaact atatttgata tagttagata aaactaatcc
    10081 ccaccgtgtc cctgggtttg aataaaccta aaccggtggg ttttcttttt attaggtcgt
    10141 ctgaaacttt cagacgacct ttttccgaac gctcaaacca cgcgtttggc gcacataatc
    10201 acggcttcga cggcgacttg tccgtccact ttggcaacgg cgttgaattt gccgatgccg
    10261 cgccggctgg tcaggagttc gacttcaaag acgagttggt cgccggggat gacttggcgt
    10321 ttgaaacggg cttcgtctat gccggcgaag aagaaaaatt cgttttcctt gcgcccgcct
    10381 tcgctcaaaa tcgccaacgt gccgcacgcc tgcgccatcg cttcgatgat gagtacgccg
    10441 ggcataacgg gcaggtcggg gaaatggcct tggaattggg gttcgtttat ggttacgttt
    10501 ttgatggcgg tcagggtttt catcggctcg aaggcggtga tgcggtcgag ctggagaaac
    10561 gggtagcggt gggggatgag tttttggatg tctttggctt cgatggggag ttgtacgtcc
    10621 atgtctgtcg tattccttga ataaagtcgg tttggattta ttgcgtgtct ttgctgtctg
    10681 aaagctgctg ttccagcgtt ttgaggcgtt tgttcatttc gcttaagcgg tggatgtaaa
    10741 cggcgttgcg tgcccattct ttatgctcgg acatcgggaa gatgccggcg atgtgtttgc
    10801 cgctttcggt aatgctgtgg gtgacggacg tgccgccgcc gatggtggtt ttgtcggcga
    10861 tttcgatgtg tccgaccgta ccgacgccgc cgccgatgat gcagtagctg cctatggtta
    10921 cgctgcctga gatgccggtt ttggcggcga tgacggtgtg cgaaccgatt ttgcagttgt
    10981 gtccgatttg gacttggttg tcgattttgg tgccgttgcc gacggtggtg tcgctcatcg
    11041 cgccgcggtc gatgttggtg ttcgagccga tttctacgtc gtcgcccagc gttaccgcgc
    11101 cggtttgcgg gattttgaac cacgaatcgc cggcgaaggc gagtccgaaa ccgtccgcgc
    11161 cgatgaccgc gccgctgtgg atttcgacgt gtctgccgag tgtgcagccg taataaacga
    11221 cggcgttggg atgcaggacg acttcgtcgc ccagtttgca atcgtgttgg acgacggcgt
    11281 ttgccaagat gcggcagcct tcgccgagca cggtgttcgc gccgatgtag gcgttcgcgc
    11341 cgatttcaca gcttgcggga acggtcgcgc ccggttcgac gacggcggtc ggatggatgc
    11401 cgccgcgcgc tttgacgacg ggtgaaaaca ggcgcgcgac tttggcgaaa tagagatagg
    11461 gatcgtcggc gacaatcagg ttgcgccctt caaatccgtc tgctgctttg gcggaaacga
    11521 tgatcgcgcc cgcgctgctg tcgtggactt cggctttgta tttcggattg gcgaggaagc
    11581 tgatgtgttc cgcctgcgcg tctgcgagcg ggcgcacggc ggtaacggaa atgtcctcgc
    11641 cgcgccattc gccgccgagc cgcgcggtga tttgggacag ggtgcaggtg gccggaatca
    11701 tggttttcct gtttggtatg ccgtctgaaa gggttagcgg gcgttcattt ctttaatgac
    11761 gctgtcggta acgtcgtatt gggtgttgac gtaaatcacg tcctgcaaaa tgacatcgta
    11821 accttcctgt ttggcgattt tgacgatgac gcggttggcg ttttgctgga gggaggcaaa
    11881 ctcttcgttg cggcggaggt tgtagtcttc ttcaaactgc gcctgttttt tgcggaacgc
    11941 ttcgaccagc ccgcgccatt tttcttcggc ttgcgccttt tttgcgtcct taagtttgcc
    12001 gccggcgagc tgcctttcca aatccaagcc ttcgcgttgc agtttttgca attcgtcctg
    12061 acgggcggaa aattcgccgt ccagtgtttt ttgaatcttg cgcgcctgct tggattcgag
    12121 gtagatgcgc tcggtgttga taaagccgat tttttggaag gtgtcggcgt gcgtgcctgc
    12181 ggtgcagcac aaaccgatca gggcggcggc aaacgcgcgg gtcaaacggg tcatggtaaa
    12241 actccttcgg atgttgccgc gaaatgccgt ctgaagggct tcagacggca tttgcgggat
    12301 tagaacgtcg tgccgagctg gaattggaag cgttggattt cgtcttccgg ttttttcttc
    12361 agcgggtagg cgtagctgaa tttcatcggg cccaaaggcg agagccaggt aaccgcgccg
    12421 ccggcggaat agcgcaattc gttggtaaag gtggatttat gcgcgttttc cgagtaaacc
    12481 gatttgttgt taccgttttc ggcggcggta taggttctgc cgtcccacac gctgcctgcg
    12541 tcggcaaaca ggctcaggcg gacggtgcgt gcgtctttcg caccgggcat cgggaagagc
    12601 agctcggcgg agacgttggc ttttttgttg ccgccgtagc tgattttttc gccgtattcg
    12661 tcatacactt tcgggccgag cgtgccgctt tcgtagccgc gcaccgaacc caggccgccg
    12721 ccgtagaagt tttcaaagaa ggggatttct ttggttctgc cgtagccgcc cgcaatgccg
    12781 acttcgccgc cgagcatcag cgtgaaggtt ttgcttaagg ggaagaacca ggtttggttg
    12841 tgggtggcgg agtagtattg cagtttgctg ccgggcaggg cgatttcggc atttacgccg
    12901 gtcaggtagc cgcgcgtcgg ccataaggcg ctgtcggtct tgttgcgccc ccagccgaca
    12961 gtgcctttgt acagcaggcc tttgaagctg ccgtctgcgc cgtcggtttt gccgtattgt
    13021 ttgataaagt cggcatagcg tttgggtgct ttgttgtagg tgttgacggt caggtgttcc
    13081 gccgccagcc cgaaattgac gcggtcgtat tcggtaacgg ggatacccat ccttacgccg
    13141 ccgccggcgg tggtggtttt atattgtttg acgctggtcg atgctttgcg cgggtcgaag
    13201 gcttttccgt aaatatcgta gcccaggctg accccgtctg ccgtgaagta cgggtcggta
    13261 aacgacagcg agccgttgag cgtggttttg cttcgcgagg cgcgcagggc ggccgacttg
    13321 cccgtaccga acaggttgtc ctgcgatacg ccggcggaca tgaccaagcc ggtatcctga
    13381 acccagcccg cgctcaagtc gagcgagccg gtggaacgtt cggtcaggct catgttcaaa
    13441 tcgactttgt cgggcgtacc ggcaagcggg acggcatcaa actgtacgtt gtcgaagtag
    13501 cccaaaagct cgacgcgctc tttggaacgt tgcagcttgg aggtgtcgta aggcgcggat
    13561 tccatttggc gcaattcgcg gcggacgact tcgtcgcggg ttttgttgtt gccggtgatg
    13621 tggatttcgt tgacgtagat tttccggccc ggttcgatgt gcaggacgaa atcgacggtt
    13681 ttggtttcgg cgttcggcag cggctgtacg ctgatttcgc tgtatgcgta gcctgccgag
    13741 cccatgcggt tctgaatctc acccaaaacg gcggtcatct gctggcgttc gtaccatttg
    13801 ccgggcttca tggtcagcag tttttccagt tcggccttgg ggacttcgtt ggtgtcgcct
    13861 tcaatcgaca ctttgcccca gcggaaacgt ccgccttcgt ggacggtgat tttgatggtc
    13921 tgcttggttt tgtcttcgtt ggtttggatg tcggtatcga ggatacggaa atcgaagtag
    13981 ccgttgttct ggtagaagtc ggttactttt tccatgtctt gggcgaattt ctggcggtcg
    14041 aaccggtcgc ttcgtgtcag ccatgtccaa atgccgcctt cggtcagcga catctgccgc
    14101 atcagtttgc ggtcggaata gacttggttg ccttcaaatt cgatgtcggt gattttggcg
    14161 gatttgccct cgtcaatcgt gatgtcgatg tcgacgcggt tgcgggcgag tttggttact
    14221 ttgggcgtga tttggatatt gagtttgccg cgcccgaggt attcttcttt caggccggcg
    14281 actgcctggt tgagtgtcgc ctgattaaag tattgcgact gcgccagccc gaacgattcg
    14341 aggtttttct tgatggcgtc gttttgcagc attttggcgc cggtgatgtt gagcgagccg
    14401 atggtggggc gttcgataac ggtcagcaga agctgcccgt ccgcagtttc gactcgtacg
    14461 tcgtcaaaga aaccggtggc gtacaggctt ttgatgatgg cactgccgtg tgtgtcgttg
    14521 taggtgtcgc cgactttgac gggcaggtag ttgaatacgg tgctcggctc ggtacgctgc
    14581 aagccttcga cacggatgtc ttggatggtg aagtcggcaa atgccaaagg cgatatgccc
    14641 aacatcatca gtgcggaggc aatctgtttc agtttcatcg taagttcctt gtggtgcgga
    14701 atgcggtttc agactgcatt ccgaaacgta aaatctaacc gatcagccgg gtaacgtcgt
    14761 tgaagaaggc ggccgccatc atcagcatca tcagggcgag cccgaagcgc aaaccgatgt
    14821 tttggacacg ttcgcccaaa ggtttgccgc gtatccattc gacagtataa aacacgaggt
    14881 gcccgccgtc caaaacgggg acgggcagca ggttcagcac gccgaggctg atgctgacca
    14941 acgctaaaaa ttccaaataa ctttgcaagc cgagttcggc ggactgtccg gcaatgtcgg
    15001 caatggtcag cggcccggaa atatggctga cagaggcgtt gccgctgatt agtttgccga
    15061 aaaatttgag ggttgtccac gagtgggaaa cggttttttc ccagcccatg ccgaatgcgc
    15121 ggacaacaga cggacggtag ctgcggcgga tttgcgcgtc ccacgccctg tccggctgcg
    15181 gacggaggcc gacgcgcccg atcagggtgt ggtcgggctg ttcgacagta tcggggcgga
    15241 tgtcggcggt atgggtttgt ccggcgcgtt cgtaggtcag ggtgattttt ttgcccgggc
    15301 tttggcgggt caggtttgcc cattcctgcc atgaggcgat gggtttgccg tcggcggcag
    15361 tcagcctgtc gcccggtttc aggcctgctt tttcggcggg gctgcctttt tccacgccgc
    15421 cggcaacggt tgtgatttta aagggcatca gtccgatgta gccttggttt tttgcgattt
    15481 taccggcttc cggcgtgcct gcggcatcga tggtgcggac ggtttgcgcg cccgatgccg
    15541 tctgaacgcc gacggcgact ttgccggctt cgaggttgag gacgatttcg gtttgcgcgc
    15601 tgctccagtc ttggacggaa acgccgttga cggattgtat tttgtcgccg ctttggaagc
    15661 cggtgcgggc ggcaatggtg tcgggttcga ctgtgccgac atagggccgc agttcggtta
    15721 cgccgaagga aaagctcagt ccgtacagca aaaccgccag tgcgaggttg gtcagcggac
    15781 cggcggcgac gatggcgatg cgcttggcgg ggtgttgttt gtcaaaagcg tagggtaaat
    15841 cggcttctga tacttcgcct tcgcgcgtat cgaccatttt gacgtagccg cccaacggaa
    15901 tcggggcgag gcaccattcg gtgtcgccgc gctttcgggt gaaaaacggt ttgccgaagc
    15961 cgacggaaaa acgcacaacc ttgacgccgc acaacctggc gacgatgtag tgtccgaatt
    16021 cgtgcaggct gaccaaaatc aggatggcga agataaaagc tagaagggtt tgcaaatggt
    16081 tttcctttga taacggtgtt cggacggtat cagcgcagtg tgccgataaa tgcccgcgct
    16141 tgtgcgcgtg tccgggcatc ttgcgccaac agtccttcta tatcgcccat gccgtttgaa
    16201 aagtcttgtg caagacagtg ggcgacggtt ttggcaatgt cggtaaactt aatctgtccg
    16261 tccaaaaagg cggcgacggc ggtttcgttg gcggcgttca atacgcaggg cgcggctccg
    16321 cctgcgttta tggtttcata ggcgaacttc aggcagggga agcggccgaa gtcgggcttt
    16381 tggaaggtca gcgcggacaa tgcgccgaaa tcgagtttgc cgacacccga atcgatgcgc
    16441 tcgggcaagc ccaaacaata ggcgatgggc gttcgcatat cgggattgcc cagttgcgcc
    16501 agcacggagc cgtcgcggta gcgcaccata ctgtgtatca cggattgggg atggatgacg
    16561 acttcgagtt tgtcgggcgg acagttgaac agccaatgcg cttcaatcag ttccaagccc
    16621 ttgtttgcca tagtggctga atcgacggag attttgcgcc ccatacgcca attggggtgt
    16681 ttgaccgcct gctcgggcgt aatgctgtcg aacgtgctta aatcggttgt taaaaacggg
    16741 ccgccggaag cggtcaggat aatcgaatcg atgccgtgtt cgttcagacg gtctgtgtaa
    16801 tcgcgcggca aaacttggaa aatggcgttg tgttcgctgt cgacgggcaa cactgccgcg
    16861 ccgtttgcgc gggcggtttc cataaacaac gcgccggaaa ccaccagcgt ttctttgttt
    16921 gccagataaa tggttttgcc tttttgcgcc gctgcgagcg cggaaggcag ccccgccgcc
    16981 ccgacgatgg cgcacatgac gccgctgact tcgtcggcag acgcaacgtc aaccaatgcc
    17041 tgcgcgccgt gtaaaacctg agtcgccgtg ccgtcgcgtt tcaacagggc ttcaagccgg
    17101 gcggcgtgtt cggcatcggc aacgacggca tattcggggc ggaacgtttg acattgagcc
    17161 gccagtttct cgacctgctt atgccctgcc agcgcgaata cgcggaattt ttcgggatgg
    17221 cgggagacaa cgtccagcgt gctttcgcct atgctgccgg tactgcctaa tatggtcagg
    17281 acttgtggtg tcataatgag gataacttta taccggatgc cgtctgaagc gttttcagac
    17341 ggcatagaat caatttaaaa ccgacattat cgccgcatag acgctgataa cggcaatcag
    17401 gctgtcggta cggtcgaaca cgccgccgtg tccgggcagc aggttgctgc tgtctttgat
    17461 gcctgccgcg cgcttgagcc agctttccaa caggtcgccg catacgctga caacggtcaa
    17521 caccaaaccg attaacacgg tatcgaacca gcctgtatcg aatgccagcc agccggcact
    17581 tcgtacggca gtcatgtaca ctgccacgca aaccgcaccg ccgattgcgc cttcccagct
    17641 cttgccgggg ctgattgccg gtgcgatttt gtgtttgccg agcgccttgc cgctgaaata
    17701 cgcgcaaacg tcggcaaccc agaccaaacc catcacggcg agcagcggca gggcatcatc
    17761 gggatgcggg cgcagggata cgagcgcgaa ccaaaacggc atgagcaaaa gccagccgac
    17821 ggcataaacc tgccaaccgc cgttgagcct ccatttgaat ctcaaccaca aaggcataac
    17881 ggcgagccaa aatgccaaaa caacatacca aaccaaatta ggcagcatcc agccgcccgc
    17941 ataggcaact acgccgaaaa ccaaggttgc ggcgaggtaa tggttggttt cggttttgca
    18001 caaaccggcc atacgggcat actcccacaa ggcggtcagg gcaatcagcc cgcaaaatgc
    18061 agcccacagc cattgcggcg cgtaaaacag catgcccagc atcagcggca gcagccacat
    18121 agcggttatt acccgttgtt tcagcatatt cagttccttt gctgtccgat aggcagttgc
    18181 tcggaagtgc gtccgaaccg ccgttcgcgt ttttggaacg aagcgacggc ggcatctaag
    18241 gcggtttcgt cgaaatcggg ccacaggatg tcggtgaaat acagttctgc atacgccatc
    18301 tgccagagca ggaaattgct gatgcgcgtt tctccgcccg tgcggatgaa caaatccggt
    18361 tccggcgcgt cgcccagcat caagtgtttg gccagcgtgt cttccgtaat ctcggatacg
    18421 ccttcggcaa tcagtttgtt tgccgcctgc aaaatatccc agcggccgcc gtaatccgca
    18481 gcaatgctca gggtcagacc ggtattattt gccgtcaagg cttccgcctc ttcgatacct
    18541 tgcagaatct gccgattaaa gcgttcgcgg ctgcccaata ttttcaggcg catattgttt
    18601 tcgtgcaggc ggcgtacctg tttttgcaaa gcctgtaaaa acagccccat caggaacgaa
    18661 acttcgtctt cggggcgacg ccagttttcg gttgaaaagg caaacacggt cagatattgc
    18721 acgcccagtt tggcgcaatg cttcaccata ttttccaacg cgtccaagcc gcgtttgtgt
    18781 cccattatac gcgggagaaa acgttttttc gcccaacggc cgttgccgtc cataattacg
    18841 gcgatgtgcc tcgggatggc ggtgtgttcc aaaatggtct gcgtgctgct cttcatatct
    18901 gcctttcgcg gttcggcgtt caaatgccgt ctgaacgccg cgccgtgaga tttaaaccgc
    18961 catcaggtct tcttctttgg cagccaaaac cttatcggct tcggcaatgt acttgtcggt
    19021 cagtttttga accgcctctt cgccgcgacg tgcctcgtct tcggaaattt ctttgtcttt
    19081 gaggagtttt ttgatgtggt cgttggcatc gcggcgcacg ttgcggatag agacgcgtcc
    19141 ttcttccgcc tcgccgcgca cgactttaat caggtctttg cggcgttcct cggtcagcat
    19201 gggcatcggc acgcggatca aatcgccgac agctgccggg ttcagtccca agtttgaatc
    19261 gcggatggct ttctcgactt tggccgccat attgccctca aacggtttca cgccgatggt
    19321 gcgcgcgtcc aaaagggtta cgttggcaac ctggctgacg gggaccatgc tgccccagta
    19381 ttcgacttcc acttggtcga gcaggccggt atgcgcgcgg ccggtacgca ctttcgccag
    19441 attttctttc agtacttcga ccgaacgctg catcttgcct tcggctgttt tttgaatatc
    19501 gttgatcata ttgttctttc ggtaagataa ggtaggcggg cagccgttcg aacgcgctcc
    19561 aagccgttca gacggcataa agaccgttaa ctgcgaatag taccgttatt cgggcatgac
    19621 gacaaggcag atgcctgtag gaagggtgtt ttacctttct agggtttttt taattgccgc
    19681 tgcaatttcg taggcaaggt tgacggggac ggcgttgcca atcattttgt atgcgtcgtt
    19741 gacattttga tagatgaatt tgaagttgtc gggaaagcct tggattcttg cgacttcgcg
    19801 taccgtcatc ctccgatata gtgtttcttt gccggcagca aaacggtagt cgtttgcccc
    19861 gtgcttttcc atctttgggg cttgcgggtg cagttggcac tgcctgcctg aagcttggac
    19921 ggtaaaaccc tgttcatccc acgctttaac tcggttccgg ctcataaaaa taggggaaaa
    19981 actgccggta aaatattcgt tgttgttgac tgcgtcgggg ttggtcttgt tttgcggggc
    20041 ggaaggtacg gctgtgtcct gcaaatccca aataacgtct ttcaatgtaa tcttgtcttt
    20101 gtcttcgacc gtcgaacctt ttggaaaaga aaattttatt tccaagtctt tacggaaacc
    20161 gatgtagaag acccttttgc gttcctgtgc tacaccgtag tctttggcgt tggccatagt
    20221 caaggttacg tcgtatccgc atccgtcaaa cattttcagc aggttttgta cggctccgtt
    20281 gtggcggttt gccagcattc cgctgacgtt ttccgctaaa aagaattttg gctgtttgct
    20341 tttcaaaata cggatgtagt cgaaaaacaa ctgtccgcgc gcatcgtcga tgccgcgcaa
    20401 agctcccgct tcagaccaag actggcaggg tgggccgccg ataatcccgt cgatttcttc
    20461 agggaaatct tcttctttaa tcttgcgtat atcgccttct atcaaatggg tctttggatg
    20521 gtttgccttg aaggttgccc aaatggtttt atcgtattcg ttggcggcgg ggatttcaaa
    20581 tcccgctttt tcgaaaccca aatccaaacc gccgcaaccg ctaaacaaac taatgatttt
    20641 cataggatta taagtggtag gtgatgagtt ttgcatttct taatcgcgcc gggttgttgg
    20701 gatttttaat tttaatgtcg gaaatggcca gtttggaatc ctgtatggca agcagcttgt
    20761 ctgtattgtt aaaactgttc catttgtctt cgttgataat ggccatgaaa ttgaaacttt
    20821 tttccatatt ccgttggtaa atatagttga agacaaacca tggattttcg attccccaca
    20881 taccccgtac tctcagataa gttatgttga gcggatcaat gcggttgacc ctgcccagct
    20941 ctttggtttc tgcaaactgt atgccgccga tgttgccgat tccttcctta atttgatttt
    21001 ttatcttcaa atagcattcg gcatcggcgc agtagtcgat tccgtaaacc attgccaagt
    21061 gtttgaggtt tttctttttg tcaacgacgc cgacaatata gataatgtct ttctcttccc
    21121 atttttccgc atctttgcag gcttttgtaa gcatgctgtc atcaacagag agctttgatt
    21181 ttgggtggct gctattcagc gccagtgcgg aatctttact ttcaattttc ttaacttcaa
    21241 tggcatcccc gtttcgcaac atggcatcag gagggttgga gttgttgccc aaatatgaga
    21301 atacttttgc gtgtcgggct atgcgttggg tttcatttag gttgaaactg ccggaaaaca
    21361 agtcttttac atattcttcc aaagcatcac ctgcctgatt ggcacgattg ttgctttgag
    21421 aatgggattc gaccccgaca acagggttgt tagccaaatt gatgatggca tcgataatgt
    21481 tcatggtttt tccttggggt tttgcggcag attatagcaa aaccgtcagg gtgtttatcg
    21541 gaccgatgcc gtctgaagcg gcaggcgttt cagacggcat cgtgtccggc cgtcagccgt
    21601 gttcccgtgt ttcaagcagg ctttggcgca ggtgttggcg ttcgtgggca tccagccatt
    21661 tgcggcgggt gcgttgcagc aggatgacga gggcggaaat ttcctgacgc atattggtgc
    21721 tgagccagag gaagccctgc cattggtagt ggaggtgttc ggcgagggct tccagttcgg
    21781 ggttgatggc ggtgtcgatg cggatgcggc gggcgtgtct gccgttgatg agggcggcgg
    21841 tttgttgcag gtcggtttgg agcagtgtga agtggcggtc gagcagccgg atttcgctgc
    21901 cgttgagttt gggagattgc agcttggcgg cggtggtcag gagcagctcg gtggtgttga
    21961 cgattttgcg gtgggcgtgc tgcatggctt ccatcatgga ggggctgatg cggctttcgc
    22021 ccgatgtggc ggcgaggtgg ctgcggcttt tgaccatgcg tgcgttgatt tggcgcattt
    22081 tgaccatatt ctgctccaaa cgttcgcgcg tcatacgcct gccgttgctg atttcggcaa
    22141 tcattttgct gcagtcggcc aggttgtcgg caagcatgaa acgccacatc agtgtggatt
    22201 tcagcggcag cagtttggcg gcggcaatgg cgatggcggc gccgatgagg acgttcatcg
    22261 cgcgcatcag gccgctgtcg agccattcgc tgccgttgtc gccgatgagc atgcacatcg
    22321 tcagccccgc cagcataggg acgtagccgt ttttgccgac cgccgcccag ccggccagtg
    22381 cgcttgccgt gccgatggtc aggtagaaga ggaggttgcc gtggaaataa tgctggttca
    22441 gccataaaac gcccaaaccc gcgcccagcc cgatgaccgt accgagcata cgttccaccg
    22501 ccttggagta aatcgcgcct tggaactgga gcatgccgag gacgacgaag acggtcatcc
    22561 ctatccattc gccgtgttgg aggtggagta gccgggcgag tgcggtggcg aacaggacgg
    22621 ctccgccgag ccgcacggca tgtatgaggc ggcggtggcg gtagcgttcg taggagttga
    22681 gccagcggcc ggaaaggcgt ttgcgttgcg aggagttcat atcggatgcc gtctgaagcg
    22741 gaaatgtgaa aaagcacagg cttcccgagg gagggtctgt gcttggtatt ggtgccggag
    22801 aagggaatcg aacccccgac cttcgcgtta cgaatgcgct gctctaccga ctgagctaca
    22861 ccggcgtttt tcgttatgat atatataaac ggttgtttgt gcaacttttc gggcgggcgg
    22921 caaggcggtg cgcggtataa tgcggcctgc ttcggaagag gggggacggc gatgtttgtg
    22981 aacgagaaat atccttatgc gaccctgttt gcggggctgg tgtttttgac gctgccgttt
    23041 gcgttggcgg tgcatgatgc ctttgcatgt gcgttcggac gggcggggct gctggtgtcg
    23101 gtgtcggacg gcggattcgg ccggcgtggc ggttgggacg gcactgtttg gtttgtgttc
    23161 ggtgtgcttg cgtttttgaa tgtggttgtg tcggcgggcc tgacgaaact ggcgtacaaa
    23221 aagatgatgc ggcggcattc gcgttacgcg ctgtttctgt cgggcgtggc ggcttgcgcg
    23281 gcggtggctt ggattttcaa gctgttgttg ggcagtgccg ccttgggcgg gctgagcggg
    23341 gaggcggtgt cggaatatgc gtttgccgtg tggctggtgt ctatgctgac gctgccgaaa
    23401 cgcctgacgc gcgcgccggt gcagcctgtg gtgttccaca ggaaaaaata ggacggaacg
    23461 gaaatgccgt ctgaaacccg atacgcggtt tcagacggca tgtttttccg ctaacattac
    23521 gcctgaatat ggacaggaag cagatatgga acgtaaagaa cgcctgcgtg caggcattgc
    23581 cgcgatgggg ccggatattt cggaaacggc gcaggacagg cttttggcct atgtggattt
    23641 gttgaaaaag tggaacaaaa cctacaatct gaccgccctg cgcgacgagg aaaaaatgat
    23701 tgtccatcat cttttggaca gcctgacgct gctgccctat atcgaaggcg cacagacgat
    23761 gctggatgtc ggttcgggcg gcggccagcc cggcattccg gcggcggtgt gccgtccgga
    23821 tgtgcagata accttgttgg atgcgaatac gaagaaaacg gcttttttgc ggcaggcggc
    23881 tatcgagttg gggttggaca atgtgcgcgt ggtgtcgggg cgcgtggagg cggtttcgga
    23941 cgtgcgtgcc gacgtggtta ccagccgtgc gtttgcggaa ctggcggatt ttgtgtcgtg
    24001 gacggcgcac ctgttgaaag acggcggcta ctgggcggcg atgaagggcg tatatccgca
    24061 gggggaaatc ggccgcctgc cgcaggatgt gtgcgtcgaa aaagtccaaa ggctcgacgt
    24121 gccgggcttg gatgcggaac gccatatcgt catcctgagc aagcgttgag cgcgcttcag
    24181 acggcatgaa tacctttttt gtgcggataa aggtaaaatt ccgcactgtt tttctttttt
    24241 tcaacatcag acgggacacg ggcgggacat gagtgcgaac atccttgcca tcgccaatca
    24301 gaagggcggt gtgggcaaaa cgacgacgac ggtaaatttg gcggcttcgc tggcatcgcg
    24361 cggcaaacgc gtgctggtgg tcgatttgga tccgcagggc aatgcgacga cgggcagcgg
    24421 catcgacaag gcgggtttgc agtccggcgt ttatcaggtc ttattgggcg atgcggacgt
    24481 gcagtcggcg gcggtacgca gcaaagaggg cggatacggc gtgttgggtg cgaaccgcgc
    24541 gctggccggt gcggaaatcg agctggtgca ggaaatcgcc cgggaagtgc gtttgaaaaa
    24601 cgcgctcaag gcagtggcgg aagattacga ctttatcctg atcgactgtc cgccttcgtt
    24661 gacgctgttg acgcttaacg gcttggtggc ggcgggcggc gtgattgtgc cgatgttgtg
    24721 cgaatattac gcgctggaag ggatttccga tttgattgcg accgtgcgca aaatccgtca
    24781 ggcggtcaat cccgatttgg acatcacggg catcgtgcgt acgatgtacg acagccgcag
    24841 caggctggtt gccgaagtca gcgaacagtt gcgcagccat ttcggggatt tgctttttga
    24901 aaccgccatc ccgcgcaata tccgccttgc agaagcgccg agccacggta tgccggtgat
    24961 ggcttacgac gcgcaggcaa agggtgccaa ggcgtatctt gccttggcgg acgagctggc
    25021 ggcgagggtg tcggggaaat aggtcaatcc aaatcgggct gcccgtgcct ttatgctgtt
    25081 tggccgggtg cgttaatatg gcggattaaa ataaaaatac ttatatcgtc atttatagcg
    25141 gattaacaaa aaccggtacg gcgttgcccc gccttagctc aaagagaacg gttccctaag
    25201 gtgcccaagc accaggcgaa ccggttccgt actatctgta ctgtctgcgg cccgccgcct
    25261 tgtcctgatt tttgttaatc cgctatatcg tcattcccgc aaaaacaaaa aaaatcaaaa
    25321 acagaaaact gaaatatcgt cattcccgcg caggcgggaa tctaggtctg tcggtacgga
    25381 aacttatcgg gaaaaacggt ttttccaatc ctgagactcc ggattcctgt tttcgcggga
    25441 atccggtttt ttgagtttca gtcatttttg ataaattctt gcagctttga gtttctagat
    25501 tcccgctttt gcgggaatgg cggtttggaa gttacctgaa attcaaaaaa aaaaacggaa
    25561 accggacgga ttggattccc gcctgcgcgg gaatgacgga ttttaggttt ttttgatttt
    25621 ctgtttttcg cgggaatgac ggttgggaag tttcccgaaa cttaaaaaca actgaaaccc
    25681 aaaaaactaa attaccgcct gcgggggaat gacggttcgg gttctttctc tttgaagttg
    25741 cgatgctgga aatgccgtct gaagttcaga cggcattttt gtgccggttt aaaacaaggc
    25801 ctgctgcgcg agcaggtttc tgacgggggc gaagtcgcgg cggtgttcgg gcagcacgcc
    25861 gtattgtttg agggcttcca gatgctgctt tgtgccgtaa cctttgtgtt tgtcgaaacc
    25921 gtattgggga cggcgttgcg ccagtgcgta catttccgca tcgcgtgcgg tctttgccaa
    25981 aacggatgcg gcggagattt cgatgatttt gctgtcgcct ttgacgactg cttcggcagg
    26041 gatgcccaaa tgttcgggaa tgcggttgcc gtcgatgaat attttttcgg gacgcgcagc
    26101 caaaccgtaa acggcacgtt tcatggcgag catggtggcg tgcaggatgt tgaggcttgc
    26161 gatttcttcg ggcgtggagg cggcgacgtg ccacgcgacc gcctgttctt taatcatttc
    26221 ggcaagcgcg tcgcgttttt tctcgctgag ttttttggag tcggtcagtc cgggcaggtc
    26281 gaatgtttcc ggaaggatga cggcggcggc aaacacgctg ccgaccaaag gtccgcgtcc
    26341 tgcctcgtcc acgccggcgg tcagtatgtg catgatgttt cctgtcggga tggtacgatg
    26401 ccgtctgaaa atggtttcag acggcatcgt accgatgtgt ttatttcgcg tctttaaacc
    26461 cgcgcttcaa atgcaccatc agcagtgcga cggcggcagg cgtaacgccg gaaatgcggc
    26521 ttgcctgccc gacggtttcg ggtttgtgct ggttgagctt ttgttgcact tcggccgaca
    26581 agcctttgac tctgccgtaa tcgatgccgt cgggcagctt taaggtttcg atgtcgcggc
    26641 ggctgtcgat ttcttcgttt tggcggtcga tatagccttg gtatttgact tggatttcga
    26701 cttgctcgat gacttcggca gagaggtttt cagacggcat cgcgccttcg agcgtcatca
    26761 gcgcggcgta atcgaggttc gggcggcgta acaaatcgtg caggttggct tcgcggctga
    26821 gtttttgtcc gaacacgcgg atttgttcgt cttcggcgag tttttgcggc gtgtaccacg
    26881 ttgttttcaa acgttggatt tcgcgttcga cggcttcgcg tttttcgttg aacatgcgcc
    26941 attgcgcttc acccaccaag ccgattttgt agccgtcttc ggtcaggcgc atatcggcgt
    27001 tgtcttccct gagttgcagg cggtattcgg cgcggctggt aaacatccgg taaggttcgt
    27061 tcaggccttt ggtgatgagg tcgtccacca atacgccgag gtaggcttgt tcgcggcgca
    27121 gcaggagcgg atcttgtccg cggacgtatt gcacggcgtt cgcgcccgcc agcaatcctt
    27181 gcgcggcggc ttcttcatag cctgtcgtgc cgttgatttg cccggcgaaa aacagtccct
    27241 caatggtttt ggtttcgagg cttgctttga ggttgcgcgg atcgaagtag tcgtattcga
    27301 tggcgtagcc ggggcgcagg atatgggcgt tttcaagacc cttcatactg cgcacgagcg
    27361 cgatttggat gtcgaacggc aggctggtgg agataccgtt ggggtagtat tcgtgcgtgg
    27421 tcagaccttc gggttcgagg aaaatctggt ggctgtcttt gtcggcgaag cggttgattt
    27481 tgtcttcgat agacggacaa taacgcggac ccacgccttc gattttgccg gtaaacatcg
    27541 ggctgcggtc gaagcctgag cggatgatgt cgtgggtttg cgtgttggta tgcgtaatcc
    27601 agcaggacac ttggcgcggg tgcatttcgg cgttgccgcg cacggacatg acgggaacgg
    27661 gcgtgtcgcc gggctgttcg gtaagttggg aaaagtcaat cgtgcgtccg tcaatacgcg
    27721 gcggcgtgcc ggttttcaga cggccttgcg gcagcttcaa ttcgcgcaaa cgtccgccga
    27781 gcgatttggc ggctgggtcg ccggcgcggc cgccttcgta gttttccaaa ccgatgtgga
    27841 ttttgccgga caagaacgtg cctgcggtca gcaccacggc gcgtgcttta aactccgcgc
    27901 ccatcgcggt gatcacgccg ctgatgcgtt cgccctcgag tgttacgtct tcgacggctt
    27961 gttggaaaag gtcgaggttt tcttggtttt ccaacatttc gcggatggag gctttataca
    28021 ggatgcggtc tgcctgcgag cgcgtggctc gtactgccgc gcctttgctg gcgttcaggc
    28081 ggcggaattg gatacctgat ttgtcggttg ccaacgccat tgcgccgccg agcgcgtcga
    28141 gttcgcgtac caaatgccct ttgccgatgc cgccgataga ggggttgcac gacatttgtc
    28201 cgagcgtttc gatattgtgt gtgagcaaaa gcgtctgcgc gcccatacgg gcggcggcaa
    28261 gcgcggcttc cgtgccggcg tgtccgccgc cgacgacgat gacatcgtag gttttggggt
    28321 aaatcatgtg ggtcatgtgt gtattgccta tcggtttttc agacggcatt ccaagcagga
    28381 tgccgtctga aaaacgaaac ggattcaaaa gtaaagggtt gggattgtac gcctgttcgc
    28441 cctgttttta cagtgcgcgg aaagggaaaa gccgcttcgc ggggaagcgg ctccggtaag
    28501 ggcgggattt accaaacatc ggatttgatg cggcgtttca ggcccggatg ttcggaaagt
    28561 ttgaactcgg ggtctttgcc cattttcagc ttggcggtgt aatcgcgcag cagcataaac
    28621 gccaatggcg agagcagcag gatggcgacg aggttgatcc acgccatgat gcccatcgcc
    28681 atatccgcca tatcccagac caaaggcaca ttggcaaccg cgccgaaata gacccacgcc
    28741 aaaaccagca tacggaaaac ggcggtaatc agccaatggc ttttgatgaa ttggacgttg
    28801 gactcggcat aggcatagtt gccgataacg gtggaaaagg caaacataaa caggatgacg
    28861 gcgaggaaac ccgcgcccca ttgccccact tggttgacaa tcgccgcctg cgtcagcgcc
    28921 gcaccgctca aatcgccata aggctgttgg taaatcaaga tgatgaaggc ggtgcaagaa
    28981 caaacgatga tggtatcgac aaacacgccc agcatttgaa tcataccttg cgaaacaggg
    29041 tgtttcactt cggcggcggc ggcggcgttc ggcgcggaac ccatacccgc ctcgttggaa
    29101 tacaggccgc gtttgatgcc catcatcatc gtttgcgaaa tcagaccgcc gagtaagccg
    29161 cctgctgccg cgtcgaattt gaacgcgccc gaaaaaatct gaccgaacac gtccggaatc
    29221 atcggaatat tggtcaaaat gatgaaaagc gcgataaaga ggtacaaaac cgccatcagg
    29281 ggcacgacga tttccgccgc tttggatatg cgcctgatgc cgccgaagat aatcggcgcg
    29341 gttaaaatca ccagggcgac gccgacataa tgaggctccc agccccacgc cgctttgacg
    29401 gtatcggcga tggtattggt ctgaaccgct tcaaacacaa aaccgaaaca gaaaatcagg
    29461 ctcagggcga acaacacgcc cagccatttc tgccccagac cgtgcgtgat gtagtaggca
    29521 gggccgcccc ggaaatggtg gttgtcgcag tcgcggactt taaagagctg cgccagcgaa
    29581 gattcgacaa acgccgaact catgccgatt aaggcggtta cccacatcca aaacaccgcg
    29641 cccggcccgc cgactttgat ggcgattgcc acgcccgcga tattgcccac gcccacgcgg
    29701 ctggcaaggc cggttacaaa tgcctgaaac ggcgtgatgc cgtgagggtc gtccccctgt
    29761 ttgcggccgc cgagcatttc tttgatgctg cgcccgaaca ggcggaattg gacaaagccc
    29821 gtggttacgg tgaagaaaag ccccgtaccc aaaagcatat aaaccaagta tgaccacatc
    29881 ggatcgttga tggcgccgac ccagccgtgc agccattcgg taaagttctc gttcatatcg
    29941 cttccttaaa gttgaaaccc gcacatatgg cggtatgcaa gcagggttta aattttgtaa
    30001 acgcccattc tagcagattg tcaacaaaat cagaaaaatt tacatcgccg cgcgcctgtg
    30061 gcgttagaat cgcgttttgt ttggagcaaa cacgatgaaa cagcctgttt ttgccgttac
    30121 ttccggcgag cctgccggca tcggccccga tatttgtttg gacttggcgt ttgcacgcct
    30181 gccctgccgc tgcgcggtat tgggcgacaa acacctgttg cgcgcgcgcg ccgaagcctt
    30241 gggcaaaagc gtcgtcctgc gcgacttcga tccggaatca ggcggcgcgc acggagaagg
    30301 cgggctggaa gtgctgcaca tccctgccgc cgaagcggtt gaggcagggt ggctcaatcc
    30361 cgccaacgcc gcctatgtgc tgcaactttt ggacaccgcg ctcgcaggca tttcagacgg
    30421 cattttcgac ggcatcgtta ccgcgccgct gcacaaaggc atcatcaacg ccgcgcgcgc
    30481 aagcacaggt tttttcagcg gacacaccga atatctggcg gaaaaaagcg gcacggggca
    30541 ggtcgtgatg atgcttgccg gcaaaggcct gcgcgtcgcc ctcgtaacga cccacctgcc
    30601 gctgaaagac gttgccgccg ccatcacgca accgctgatt gaaagcgtcg cacgcatttt
    30661 gcatcacgac ttaaaacaca aattcggcat caaaaatccc aaaatcctag tcgccgggct
    30721 caatccccac gccggcgaag gcggacacct cggacacgaa gaaaccgaca ccattatccc
    30781 cgcgctcgaa aacctgcgcc gcgaagggat aaacctcgcc ggcccgtatc cggcggacac
    30841 attgttccaa ccgtttatgc tcgaaggtgc ggatgccgta ttggcgatgt accacgacca
    30901 agggctgccc gtgttgaaat accacagctt cgggcagggc gtgaacatca cgctggggct
    30961 gccctttatc cgcacctccg tcgatcacgg caccgcgctc gatttggcgg caaccggcag
    31021 ggcggactcc ggcagcctga taactgccgt ggagaccgcc gtcgagatgg cgcgcggcag
    31081 cctttaaaga tgataaaaga cccgtcattc ccgcgcaggc gggaatccgg accttcgggc
    31141 ggcggcaata ttcaaaggtt atccgaaagt ttgaggttct agattcccgt tttcacggga
    31201 atgacgaaag gtggcgggaa tcacgggaat ggcgaagttt cagacggtat tgcaggtatc
    31261 cgaaaccatg caaaaagagg ttctgcggaa cagaacctct ttttgccgcc gtcggttcag
    31321 ccttgccggg tttcgacttg gatcatttct tcggcaggga cggttgcggc ttcagacggt
    31381 tttggctgtt cggaacggcg caaaccgcgt ccggcttgga cttcgggttg tgccgcccat
    31441 gccttcaatg cggcagggtc ggtttcgatc aggacgagtc cgccggtttg tgcggtttcc
    31501 cgtgcctgtt ccgccgcagc cgtaaaggtt gcggtttcag acggcatttc ctgtgctgcg
    31561 gctttcggtg ccgcgccttc gggcaggatg tcggcggcgg cacggcggat tttttccgcc
    31621 gcatcataaa tcagtgcgtc gccgtttgaa acggcggaag atgccgtctg aacgggtgtg
    31681 gcgatgagcg gatcggcaat gctgacggta atcggcgcgt ttgcgtcggt ttcgccgaaa
    31741 acgtgcgcgg cggcggaacg gactttgtcg gcggtgtcgt gaatattcag gtactgctcg
    31801 attttggcgg cagacgggat attgcgtttt ttgccgtttt gacggcggtc gcgctgattg
    31861 ttgcgttcgc ggcgttcttt ggcatcgcgg ctgtcgcgtt cgcggcggtt gcgttcggat
    31921 ttgggcttgc tgcctttgtc ttctgcggta tacggttcgg gcggcgtgtt ttccgctgtc
    31981 tgaacggctg tttcggcgac ggcggcggtt tccggtgcgg tttggccacg ttcgttgcgg
    32041 ctgccgttgc ggcggcgttt tccggtttga ccttcggttt cgggcggtgc ggcatctgca
    32101 acgggtgcgg caggctgtac gttgcggctt tggatttccg cttcgttggc gcgttcggtg
    32161 gcacggtcgc cgcgttcgtt gcggcggcgg ttgccgttgt tgcgcgtttc ggctttgtcg
    32221 gcgcgcgctt tctgtccggc agttttgccc gccgcttcgc ggacttctat tttgctgcct
    32281 tcgcgtttgc tgcggcgcgg gtttcggcgg cggttgttgg cgcggctgcc gctgcggttt
    32341 gccgtgctgc gtttttcgga ggtttcggca gcgggtacgg cttgggtttc gctgccgccg
    32401 aaaatgcgtt tgagccatgc tttgaagctg tcccaccagg aggttttttt ctcgggggcg
    32461 gcagtcgg
//
LOCUS       DAXGCP010000012        32308 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.012, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000012 DAXGCP010000000
VERSION     DAXGCP010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 32308)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32308)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32308
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.012"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(207..1046)
                     /locus_tag="ACFJCW_000505"
     CDS             complement(207..1046)
                     /locus_tag="ACFJCW_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HFC4150740.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADSAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1331..1406
                     /locus_tag="ACFJCW_000506"
     tRNA            1331..1406
                     /locus_tag="ACFJCW_000506"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1364..1366,aa:Arg,seq:ccg)
     gene            complement(1471..2664)
                     /locus_tag="ACFJCW_000507"
     CDS             complement(1471..2664)
                     /locus_tag="ACFJCW_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HFC4150741.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGRMP
                     VLESVSRAETARAAAPAPSPYLPMEGLDVYRSAVQHLLFGKGNPALAQGRIVTVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSERQWDEVLQIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMDLPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSSELYALWQNEVYMMRDRIRAMRQKLYGVLTARIP
                     DRDFTYFIKQRGMFGYTGLSVGQVRRLRDEFAVYLLDSGRMCVAGLNTSNITYVADAL
                     AEVLK"
     gene            complement(2684..3772)
                     /gene="trmA"
                     /locus_tag="ACFJCW_000508"
     CDS             complement(2684..3772)
                     /gene="trmA"
                     /locus_tag="ACFJCW_000508"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HFC4150742.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASLIRCDRFDAASEAVNCLMPELIAVAAQSAELRNHW
                     YAVEFLSTLSGEMLVTMIYHKRLDDEWMKAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLRVGDRDFHYRQIEGSFTQPNAAVCRKMLEWACRAAEGLGGDLLELYCGNGNFTL
                     PLSRYFRQVLATEISKTSVSAAQWNIEANWIGNIKIARLSAEEFTEAYTGKREFTRLK
                     ESGIVLTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLTETH
                     TVGRAALFDQFPFTHHIESGVLLKKKIL"
     gene            3919..5019
                     /gene="aroC"
                     /locus_tag="ACFJCW_000509"
     CDS             3919..5019
                     /gene="aroC"
                     /locus_tag="ACFJCW_000509"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HFC4150743.1"
                     /translation="MAGNTFGQIFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATAF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKKIRFEGSEHISQNPFFAANQSQIAELEHYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDICVNIAIKPTSSIATPRRSIDIHGNPVELATRGRHDPCVGLRAAPIAEA
                     MLALVLIDHALRHRAQNADVAADTPDISRSDK"
     gene            5110..5535
                     /locus_tag="ACFJCW_000510"
     CDS             5110..5535
                     /locus_tag="ACFJCW_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HFC4150744.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDSALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETPSVEAEAAESSAAE"
     gene            complement(5609..7594)
                     /gene="parE"
                     /locus_tag="ACFJCW_000511"
     CDS             complement(5609..7594)
                     /gene="parE"
                     /locus_tag="ACFJCW_000511"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HFC4150745.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATEIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVSVKRDGKVHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDGHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTSLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVSGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARIRSVKKIEKKKGSGVAILPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHAINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAQLDI"
     gene            complement(7661..8209)
                     /locus_tag="ACFJCW_000512"
     CDS             complement(7661..8209)
                     /locus_tag="ACFJCW_000512"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HFC4150746.1"
                     /translation="MNLTEGDTVLDREGYRPNVGIILINERNEVFWGKRVREHSWQFP
                     QGGIKPGESPETAMYRELYEEVGLLPQHVKIVGRTRDWLRYDVPNNWVRREWRGSYRG
                     QKQIWYLLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELS
                     SRFLRGMESYEDFAARQPSGNR"
     gene            8351..9646
                     /gene="serS"
                     /locus_tag="ACFJCW_000513"
     CDS             8351..9646
                     /gene="serS"
                     /locus_tag="ACFJCW_000513"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HFC4150747.1"
                     /translation="MLDIQLLRSNTAAVAERLARRGYDFDTARFDALEERRKSVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPPGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHMLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVAGSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYGALEEMVGHAENILKALELPYRVITLCTGDMG
                     FSAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRMKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVTKLEVK"
     gene            complement(9719..10717)
                     /locus_tag="ACFJCW_000514"
     CDS             complement(9719..10717)
                     /locus_tag="ACFJCW_000514"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HFC4150748.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDAKTAKMAEG
                     AEAACIFVNDDASRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEVEKLGGRYVDLDELYARSDIITLHCPATPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSAAAIEALKCRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10842..11918)
                     /gene="prfA"
                     /locus_tag="ACFJCW_000515"
     CDS             complement(10842..11918)
                     /gene="prfA"
                     /locus_tag="ACFJCW_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HFC4150749.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATSDMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKIDELDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRTDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREVQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(12008..12778)
                     /locus_tag="ACFJCW_000516"
     CDS             complement(12008..12778)
                     /locus_tag="ACFJCW_000516"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC4150750.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATCPQDW
                     QDVAELSEMPSEHGQIRIALGIHPWFSDGIAEQDFSGLEAVLVRYPRAWVGEIGLDFY
                     DKTQTPPQRERQIQVFSRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFTQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLENTV
                     NTPANILRIAEIAAEIRGTGAAEIAAITERNADSLLRP"
     gene            complement(12781..13773)
                     /locus_tag="ACFJCW_000517"
     CDS             complement(12781..13773)
                     /locus_tag="ACFJCW_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HFC4150751.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSAGLRPDTALVGQALAPFSDGMDFD
                     WHVCEPLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANMFALALQGL
                     DKPIVLTGSQWPYNAEGSDAPRNLVTAVAAFPLGLKQTLIAFDGKLYPAVGSSKISTE
                     TAAGFGNAHFGALAEWDETRGWHNVRIPNQDAADVSDGLEIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAQALILQSYGHGNTSAGEGFIRAVQDFTQQGKLLLNISQVPQGC
                     AAAVYAQGDALRRAGVVNGGKCNLETATALMTLAVSEGWGADGVKHELQRLGLV"
     gene            complement(13840..14523)
                     /locus_tag="ACFJCW_000518"
     CDS             complement(13840..14523)
                     /locus_tag="ACFJCW_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC4150752.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLAGDGVMFAAGRIWGQKILKFKLIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14713..16047)
                     /gene="glmM"
                     /locus_tag="ACFJCW_000519"
     CDS             complement(14713..16047)
                     /gene="glmM"
                     /locus_tag="ACFJCW_000519"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HFC4150753.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNTYSDNGIKFFAEGGVKLSDEVELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPGHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGNEPNGYNINEK
                     CGATHTKTLQAAVLQNEADYGIALDGDGDRLMMVDKNRQVYDGDSLIYVIAKARTREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLIGGEASGHILC
                     MDKHNTGDGIISALQVLAALQILNQDLAAVCADWQPYPQTMINVRIQKGQKWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIAAAIGGI"
     gene            complement(16177..17028)
                     /gene="folP"
                     /locus_tag="ACFJCW_000520"
     CDS             complement(16177..17028)
                     /gene="folP"
                     /locus_tag="ACFJCW_000520"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HFC4150754.1"
                     /translation="MARHVWQAGRFKIGLDKPKIMGIVNLTPDSLSDGGAYSQNAQTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSPEEEWARVEPVLAEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGALELLACQADTGICLMHMQGLPKNMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGL
                     PLLIGVSRKSMIGELTGEADAAARVHGSVAAALASVARGVQIVRVHDVKATADALKAW
                     EALGINL"
     gene            complement(17168..18061)
                     /locus_tag="ACFJCW_000521"
     CDS             complement(17168..18061)
                     /locus_tag="ACFJCW_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HFC4150755.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVRIAAEP
                     SVWSNADAVFLDPFFTSANLYDTLSADEGRGRCRRLAEQAASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLGHTKGHPYRLDVESIVKVRQISHLPVIANITGLWSRDMPQEILY
                     GLAKAAGACGIVGTCFEKAGG"
     gene            18152..20254
                     /locus_tag="ACFJCW_000522"
     CDS             18152..20254
                     /locus_tag="ACFJCW_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HFC4150756.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTMLLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIRRRLLPRPTVILKNLTITEPDGGRVAVSVKETKIGLSWK
                     NLWSDRIQVEKWVVSGADLALTRDRNGAWNIQDLFDGAKHSASVNRIIVENSTVRLNF
                     LQQQLILKEISLNLQSPDSSGQQFESSGILVWRKLSVPWKSRGLFLSDGIGTPEISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPALALK
                     NNSIKTGTVNGTFTAGGEYARWDGSFKLDKANLHSGIANIGNAEISGSFKTPRLQTNF
                     SLGSPLVWSRDNGLDAPRLHISTLQDTVDRLPQPRFISRLDGSLSIPNLQNWNAELNG
                     TFDRQPVAAKFKYTREGAPRLEAAAALQKLNPAPYLDEFRQQNGKIFPDILGRLSGNV
                     EAHLKIGSIQLPGLQLDDMETYLHADKDHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGENRKQLIRSLQGSLSLNISN
                     GAWHGIDMDSILKNGLSGKISGSTPFYRFTLNSEISDGISRHIDTELFSDSLYVTSNG
                     YTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRKEKQK
                     ILEDTLLEQWQWLKPKEP"
     gene            complement(20318..21796)
                     /gene="ubiD"
                     /locus_tag="ACFJCW_000523"
     CDS             complement(20318..21796)
                     /gene="ubiD"
                     /locus_tag="ACFJCW_000523"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HFC4150757.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDHFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMTGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATSKWPGETDREWGRVIKKDPAVTVKIDGIWGKLGL"
     gene            complement(21816..22331)
                     /locus_tag="ACFJCW_000524"
     CDS             complement(21816..22331)
                     /locus_tag="ACFJCW_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HFC4150758.1"
                     /translation="MHTCTSCGEKHEDMPATGFTAPYPYNQLSEEERIAYQAECDSDF
                     CIIRYSDQTDRFIRAALPIPIIGHEETLEYGVWVSVSEKSFNDYQSRFYDNSENAVYF
                     GMICNRLPPYESDTFGLHCNVVTQPDGQRPLLQLHQSGGHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22338..22655)
                     /locus_tag="ACFJCW_000525"
     CDS             complement(22338..22655)
                     /locus_tag="ACFJCW_000525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150759.1"
                     /translation="MYWYPVLVNLMMLAVFGSSLFAGQTVIEKLARLQQPDLPEKAVR
                     YTRRVTQVWCVFFIANGTLAALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLV
                     LKV"
     gene            22703..22810
                     /locus_tag="ACFJCW_000526"
                     /pseudo
     CDS             22703..22810
                     /locus_tag="ACFJCW_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(22968..23780)
                     /locus_tag="ACFJCW_000527"
     CDS             complement(22968..23780)
                     /locus_tag="ACFJCW_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
                     /protein_id="HFC4150760.1"
                     /translation="MPPIICRFHFDIADWRVSGSKMRDMAQWRQWAECPDFADGLPDV
                     RRELPFLPAMRRRRLSKAARLVCDAAWDIASAHPGSPVVYASHDGEMARSFDLWLELL
                     KSHTVSPTSFGLSVHNATAGQWSILRRDMSEQTALAVCADGVETALAEAASLLEEGCG
                     SVLVLAADDPLPEGYAVSATRAPFAYALAMVLTKGTRYSLTLSASDDMPSEAGMLPEA
                     YWSGLEWVRFLLNGSRECRRVYRNREWLWQPASCRLKISAMSAPSTTWYRRY"
     gene            23981..24417
                     /locus_tag="ACFJCW_000528"
                     /pseudo
     CDS             23981..24417
                     /locus_tag="ACFJCW_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244260.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thioester dehydrase"
     gene            24445..25174
                     /gene="fabG"
                     /locus_tag="ACFJCW_000529"
                     /pseudo
     CDS             24445..25174
                     /gene="fabG"
                     /locus_tag="ACFJCW_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
     gene            25168..26513
                     /locus_tag="ACFJCW_000530"
                     /pseudo
     CDS             25168..26513
                     /locus_tag="ACFJCW_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714702.1,RefSeq:WP_003777802.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-[acyl-carrier-protein] synthase"
     gene            26567..26642
                     /locus_tag="ACFJCW_000531"
     tRNA            26567..26642
                     /locus_tag="ACFJCW_000531"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26600..26602,aa:Ile,seq:cat)
     gene            26717..27475
                     /locus_tag="ACFJCW_000532"
     CDS             26717..27475
                     /locus_tag="ACFJCW_000532"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC4150761.1"
                     /translation="MKKVSVLIVAKNEANHIRECIESCRFDKEVIVIDDHSADNTAEI
                     AEGLGAKVFRRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVRTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGGSVQGKVHETVQTPYPERRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVSFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            27476..28540
                     /locus_tag="ACFJCW_000533"
     CDS             27476..28540
                     /locus_tag="ACFJCW_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC4150762.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     DELMRRRFSEVSSVFTTRLHTFNGLFSLYALTRFIRENHISHLMIHTGKIAALSVLLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRGVSASGAEPFVSFEGFTEKLASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVAARFTINHTADKLLDAI"
     gene            28774..30111
                     /locus_tag="ACFJCW_000534"
     CDS             28774..30111
                     /locus_tag="ACFJCW_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC4150763.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTVLVALPVQLAEFYIGRTGGKNAVDSFRVLRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAVRSLTLPDAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PNQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGAWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGAGSTVPRAVLLLWLNTLRYLAPIAIIIVFVNSLGIL"
     gene            complement(30286..31298)
                     /locus_tag="ACFJCW_000535"
                     /pseudo
     CDS             complement(30286..31298)
                     /locus_tag="ACFJCW_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703756.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
     gene            complement(31307..32101)
                     /locus_tag="ACFJCW_000536"
     CDS             complement(31307..32101)
                     /locus_tag="ACFJCW_000536"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HFC4150764.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRSWP
                     VPDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAVVSV"
BASE COUNT         7368 a         9232 c         8434 g         7274 t
ORIGIN      
        1 tataaaacaa atgggttaaa ccagtatcca tacatcagct tttttatcat cctacttttt
       61 attcatccga tcgggcagac agatttcaaa gatgaaaagc ctattctatt cacacccatt
      121 tgatgtcatt tccacacgga cgaacaaata aattcccata aaaaaacgga gcagatacct
      181 gccccgtttt ttaatttaat ccgaatttag aattttgcac cggattggtt tgccatatag
      241 tcaacagccg ctttgacttc gtcatcgctc aaacctgcat tgccgccttt ggccggcatc
      301 gcgttaaagc cttcaagggc atgtttgtgc aaggtttctt tgcctttttt gatacgcggt
      361 gcccaatcgt cttttttgcc tatgccggga ataccgggaa tcgaaccgcc gtggcacacc
      421 tgacaggttg cttcgaagac ttttttaccg tcaacgccga ccgcaggggc tgccgcaccc
      481 ttgtcttctg ccttcgcttc tgccggagct gcactatcgg caggagcaga agctgttcct
      541 gaagcggcat tgtcggcagg cgcagcctca tcaggattcg ggaaagaacc gccgctttta
      601 ttcgccatgt aggtaatcgc ccgtttgagt tcctgatcgg tcaggtctgc cgcaccgcct
      661 ttggcaggca tggcgttaaa gccgttcagc gcgtgttgga acaaggtatc gaagccttgc
      721 gcgatacgcg gcgcccagtc gccgttgtgt tccagtttcg gagcgttcgg cacattgctg
      781 tccgccgcgt ggcattggat acagattttg ccgaaaatct gttcgccttg gcgttcgccg
      841 acggggatgc cgtcacccat cgtcaattgt ccgacaggct ggatgcgggt ctgcgttgcc
      901 gcttccgtag tggcatcgac atcgccgaac gatccactgc ccgccagctt aatcaggaaa
      961 taaaggactg caataacaat aacgataccg ctcacaaggg taaacagtgc agagccttgg
     1021 gctttgttgt cgcggagttg tttcatttgg taggcctcgc cgtcaggtta ggttgtgctg
     1081 tagattatag tttggcgtgt taaacacagt taacaatatt ttgctggatt atactgaatt
     1141 cacagggtct ttccaatcgc tatcattgaa aatatgaaaa aatttgccaa tggtatctgt
     1201 acaaaacaaa taatccgttg aaaataccgg attatctcca agaaaactcc ccttgtgccg
     1261 ccatacgccg cctgccggcg caagataacc tttgccaatt tgcagaattt acgttaacct
     1321 tacgttttcc gcacccatag ctcagttgga agagtgtcag tttccgaagc tggaggtcac
     1381 aggttcgatc cctgttgggt gcgccaatta taaagaggcc gtctgaaaga taaatatttt
     1441 tcagacggcc ttttgactta cttcaaattc ttatttcaac acttcggcaa gcgcatcggc
     1501 gacataagtg atatttgatg tattcagccc ggcgacgcac atcctgccgg aatccagcag
     1561 gtaaacggca aattcgtcgc gcaacctgcg gacttgcccc acgctcaacc ccgtgtagcc
     1621 gaacattccg cgctgtttga tgaaataagt gaaatcgcgg tcggggattc gggcggtcaa
     1681 tacgccgtaa agtttctgcc gcatcgcacg gatgcggtcg cgcatcatat aaacttcgtt
     1741 ttgccacaag gcgtaaagtt cggagctgtt catcacgtcg gcggcgatat acgcgccgtg
     1801 cgcgggcggg ctggagtaga tgcggcggac ggtgaatttg agttgtccga acaccaaatc
     1861 cgcttcttct ttattggggc aaaccacgct taagccgccg acgcgttcgc cgtagagcga
     1921 caggtttttt gaaaacgaat tgctgacaaa cagcggcaaa tccatttcca ccgctttgcg
     1981 gacggcgtag gcatcgctgt ccaaatcgcc gccgaagcct tggtaggcga tgtccataaa
     2041 cggaatcagt ttgcgcgttt tgatgatctg caacacttcg tcccattgcc gttccgacat
     2101 atccacgccg gtcgggttgt ggcagcaggg atggaggatg aggacgctgt tttcgggcag
     2161 ggtgttgaaa aacgcggtca tttcgtcgaa tttcacgccg acagtggcag ggtcgtaata
     2221 tgggtaagtg ccgacctcga aacctgcgcc ttcaaaaatg ccgcgatggt tgtcccaagt
     2281 cggatcgctg acgtaggcgc gcgcttcggg aaaccagcgg tgcaggaaat ccgccccgac
     2341 tttgagcgcg cccgagccgc ccagagtctg tacggtaacg atgcgtccct gcgcgagcgc
     2401 ggggttgcct ttgccgaaca acaaatgctg caccgcgctg cggtaaacgt ccaaaccctc
     2461 catcggcagg tagggcgacg gcgctggcgc ggcggcacgg gcggtttcgg cacggcttac
     2521 ggattccaat acgggcattc tgccttcgtc gtcgaaataa atgcctatgc tcaaattgac
     2581 tttttcgggg cgcgggtcgt ttttgaaggt ttcgaccaaa ctcaaaatcg ggtcgccggg
     2641 atagtattcg atgtgtcggt acatagtcct taccttttgc ttttcaaagg attttctttt
     2701 tcaacagtac gccgctttcg atatggtgcg taaacgggaa ttggtcgaac agggcggcac
     2761 gtccgaccgt atgggtttcc gtcaaggtgt ccaaattggc gcgcagcgtt tcgggattgc
     2821 aggaaatgta gatgatgttg tcgaactgcg acaccagctt caaagtttcc tcatcgatgc
     2881 cggcacgcgg cggatcgacg aaaatagtgg aaaatgcgta atccgtcaaa acaataccgc
     2941 tctccttaag gcgtgtaaac tcacgttttc cggtataggc ttcggtaaac tcctcagcag
     3001 acaggcgggc gattttgatg ttgcctatcc agtttgcctc aatattccat tgcgccgcac
     3061 tgacggaggt tttggagatt tcggttgcca aaacctgtcg gaaatatcgg gacagcggca
     3121 gggtgaaatt gccgttgccg caatacagtt cgagcaggtc gccgcccaag ccttccgccg
     3181 cgcggcacgc ccattcgagc attttccggc atacagcggc attcggctgg gtaaagctgc
     3241 cttcgatttg gcggtagtgg aaatcgcggt cgccgacgcg cagggtttcc gtcacatagt
     3301 cctgttttaa gactattttc tgccccctgc tccgcccgat aacggaaata tccaactgtt
     3361 gctgtaacgc ttgcgccgcc ttcatccact catcatcaag ccttttgtgg taaatcatgg
     3421 taaccagcat ttccccgctg agcgtggaca gaaattcgac ggcataccaa tggtttctca
     3481 gttcggcaga ttgggcggca acggcaatca attcgggcat caggcagttg actgcctctg
     3541 aagcagcatc gaaacggtcg caacggatca ggcttgcccc gctagccttc tgcccttttt
     3601 caaacatggc gtaaaacatt tcaccgcctt cgtgccaaat gcggaattcg gcgcgcatgc
     3661 ggtagtgttt gtccggagat tcgtacactt cccactcagg aacatccaaa cctgcaaaaa
     3721 gggttttaag gtagtctttt ttaccttgaa gctgctgcgt gtagtcattc atatcgctat
     3781 cctgaaaaat caggccggat tataagccga ttttcctcgc cgcacgcaaa ctctttgact
     3841 gccgcccctt caatgacgga cgggcttttg tgctaaaatc cgccatcttt ccacactata
     3901 ccgataaagg gaaaaatcat ggcaggcaac actttcggac aaatcttcac cgtgaccacc
     3961 ttcggcgaaa gccacggcgc gggtttgggc tgcatcatcg acggctgccc gcccggcttg
     4021 gaattaagcg aagcggatat ccaatttgac ctcgaccggc gcaaacccgg caccagccgc
     4081 cacgttaccc aacgccgcga agccgaccaa gtcgaaatcc tctccggcgt attcgaaggc
     4141 aaaaccaccg gcacacccat cgccctccta atccgcaaca ccgaccagcg cagcaaagac
     4201 tacggcaaca tcgccaccgc cttccgcccc ggacacgccg actataccta ttggcacaaa
     4261 tacggtacgc gcgactaccg gggcggcggc aggagttccg cccgcgaaac cgcagcccgc
     4321 gttgccgccg gagccgttgc caaaaaatgg ctgaaagaaa aattcggcac ggaaatcacc
     4381 gcctacgtta cccaagtcgg cgaaaaaaaa atccggtttg aaggcagcga acacatttcc
     4441 caaaatcctt tttttgccgc caaccaaagc caaatcgccg aactggaaca ctatatggac
     4501 ggtgtgcgca aatccttgga ttccgtcggc gcgaaactgc atatcgaagc cgccaacgtc
     4561 cccgtcggtt tgggcgaacc cgttttcgac cgcctcgatg ccgaaatcgc ctacgcgatg
     4621 atgggcatca acgccgtcaa aggcgtggaa atcggcgcag gttttgacag cgtaacgcaa
     4681 cgcggcagcg aacacggcga cgaactgacc ccgcaaggct tcctgtccaa ccattcgggc
     4741 ggcatcctcg gcggcatcag caccgggcaa gacatctgcg tcaatatcgc catcaaaccc
     4801 accagctcca tcgccacacc gcgccgaagc atcgacattc acggcaaccc cgtcgaactc
     4861 gccacccgcg gcaggcacga tccctgcgtc ggcttgcgcg ccgcgccgat tgccgaagct
     4921 atgctcgcct tggttttaat cgaccacgcc ctgcgccatc gtgcgcaaaa tgcggatgtt
     4981 gccgcggata cgcccgatat ttcccgctcg gacaagtaaa aagatttagc caaaacacgg
     5041 gctttatact aaaataccga ccattgccgt gccgtctgaa cgcacgattc ttagaggaat
     5101 acaaccgaaa tgacacaaga aaccgctttg ggcgcggcac tgaaatccgc cgtccaaact
     5161 atgagcaaaa agaaacagac cgaaatgatc gccgaccaca tctacggcaa atacgatgta
     5221 ttcaaacgct tcaaaccgtt ggcgctcggc atcgatcagg atttgattgc cgctttgccg
     5281 caatacgatt ccgcactgat tgcacgcgtc ctcgccaacc actgccgccg tccgcgctat
     5341 ctgaaagcct tggcgcgcgg cggcaaacgt ttcgatttga acaaccgttt caaaggcgaa
     5401 gttacccccg aagaacaggc gattgcgcaa aaccatcctt tcgtgcagca ggctttgcaa
     5461 cagcagtccg cccaagctgc cgccgaaacg ccgtctgttg aagccgaagc agccgaatct
     5521 tccgcagcag aataaatccc caaacgaaat gccgtctgaa aaccgatttg gtttcagacg
     5581 gcattttttc gtatgcggca atcacggctc aaatatcgag ttgcgccgta tcgccttcgc
     5641 gttccatcca agcgcggcgg gcggcggctt cgcctttgcc catcagtttg acgaagatgt
     5701 cgcgcgtctc gtcatccgcg ccttcgggga tttgcacctg caacaggcgg cgggtgtcgg
     5761 ggtgcatggt ggtgtctttg agctggtcgg ggttcatctc gcccaagcct ttgaaacggc
     5821 tgatggaata ggcggtttct ttaacgcctt ctttttgcag ccgctctaaa atgccgtcaa
     5881 gttcgttttg gtcgagggcg tagaatttgc gggcgggttt gcttttgcct tgtgcgttga
     5941 catcgacgcg gaacagcggc ggctgggcga cgtagatgtg tccgtcggcg accagtttgg
     6001 ggaagtggcg gtagaacagg gtcaacagca aaacctgaat atgcgaaccg tccacgtcgg
     6061 catcggacaa gatggctatt ttgccgtagc gcaggccgct taagtcggga tggtcgttga
     6121 tggcgtgcgg atcgacaccg atggcgacgg aaatgtcgtg gatttcggcg ttgccgaaaa
     6181 gctggtcggg gtggacttca aagctattga gcactttgcc gcgcaggggc aggatggctt
     6241 gtgtggcttt gtcgcgggcg agtttggcgg agccgccggc ggaatcgcct tcgacgagga
     6301 agagttcgtt ttcgcggatg tcttcgcttt cacagtcggt cagcttaccg ggcaggatgg
     6361 cgacgccgct gccttttttc ttttcgattt ttttaaccga acgtatccgt gcctgtgcct
     6421 gacggatggc gagttcggcg atttttttgc cgaagtccac gttttggttc agccacaatt
     6481 ccaaaggatc gcccgatacg gcggcgacaa gtttcagcgc gtcgcggttg gtcagcttgt
     6541 ctttggtctg accttggaat tgcgggtcga ggacgcgggc ggagaggacg aaggcggttt
     6601 ttccgaacac gtcgtcgctt tgcactttaa cgccgcgcgg taagaggttg tgcaggttga
     6661 tgaaattgtt gacggcgttg aacacggctt gtttcaagcc tgcttcgtgc gttccgccca
     6721 gcgaggtcgg gataaggttg acgtagcttt cgttggcgca cgagccttct tccagccaag
     6781 tcaaagcaaa cgcggcacct tcgccaatgc tgaaatcgcc gttgtggccg tctgaaatgt
     6841 agttttcgca ggagaacagc ggcacggctt cctgtgcgtc ggcaatcagg tcggtcagat
     6901 agcttttcag accgtcgggg taatgccagg tttgggtgtg cgcttcgtct tcgcctttga
     6961 ccggacgggt cagggaaacg cgcacgcccg gcagcagcac ggctttggcg cgcaatagac
     7021 gctcgagttc gggaatgctg taattcgggc tttcaaaata tttgccgtcc ggccacacgc
     7081 gcacttcggt gccgctgtct ttgacggcgc atttgcccac ttgtgccaac ggttcgacca
     7141 catcgccgcc ggcaaacacg atgcggtgga ctttgccgtc tcgtttgaca ctgacttcaa
     7201 gtcgggtgga aagcgcgttg gtaacggata cgcccacacc gtgcaggccg cctgaaaagg
     7261 catacgcact gccgccgtct tttttgttga acttgccgcc cgcgtgcagg cgggtaaaca
     7321 cgagttcgac tacgggtacg ccttcttcag ggtgcaggcc gacgggaatg ccgcgcccgt
     7381 tgtcgcgcac ggaaagcgaa ccgtcttcat gaatttgcac gtcgatttca gtggcgaaac
     7441 cgcccaacgc ctcgtccgcc gcgttgtcga tgacttcttg gcagatatgt gtcgggctgt
     7501 cggtgcgggt gtacatgccg ggacgttctt tgaccggctc caagcctttg aggacggtga
     7561 tgctggattc gctgtattgg ttgtttttag ccataggaat aatctgaaag taagaaaaac
     7621 aacgctttca gacggcctga aagcgttgcg ttccgttgtt ttaccggttg ccggaaggtt
     7681 ggcgggcggc aaagtcttca taactttcca taccgcgcag gaagcgggaa gagagttctt
     7741 tcaacgcccc caaataaacg tcgcgtttga aatcaatcac ttcgtcaacg ggcgcccaat
     7801 attgatgcca acgccagccg tcaaattcgg ggtggcgggt ggcgcgcagg ttgacatcgc
     7861 aatcccggcc ggtcaggcgc aggagatacc aaatctgctt ctgcccgcga taagagccgc
     7921 gccattcgcg gcgcacccag ttgttcggca cgtcgtaacg cagccagtcg cgcgtccgcc
     7981 cgacgatttt gacgtgttgc ggcagaagtc cgacttcttc gtaaagctcg cggtacatcg
     8041 cggtttcggg gctttcgccg ggcttgatgc cgccttgcgg aaactgccaa gaatgttcgc
     8101 gcacgcgctt gccccaaaag acttcgttac gttcgttaat taggataata ccgacattgg
     8161 ggcgatagcc ttccctgtcc aacacggtgt cgccctccgt taaattcaat cttgggattt
     8221 tcccacaaat cggacggttt tgacaaatcg gacggtatgg ttcaagcatg tcgaaacacg
     8281 gacggattcg ggaaaatatc ttaaatttgg tttacaataa tacgtttcaa attaattccg
     8341 gaatcagact atgttagata tccaattgct ccgcagcaac accgccgccg ttgccgaacg
     8401 gcttgcacgg cgcggttatg actttgatac cgcacgtttt gacgcactgg aagaacgacg
     8461 caagtccgtt caggtgaaaa ccgaagaact acaagcctcg cgcaacagca tttccaaaca
     8521 aatcggcgca ctgaaaggtc agggcaaaca tgaagaggcg caggcggcca tggatcaagt
     8581 cgcccaaatc aaaaccgatt tggaacaggc tgccgccgat ttggatgccg ttcaaaaaga
     8641 attggacgca tggttgttga gcatacctaa cctgccgcac gaaagcgtac ctcccggtaa
     8701 agacgaaacc gaaaacgtcg aagtccgcaa agtcggtacg ccgcgcgaat ttgattttga
     8761 aatcaaagat catgtcgatt tgggcgagcc tttgggcttg gatttcgaag gcggcgcgaa
     8821 actttccggc gcacgattta ccgtgatgcg cggacaaatc gcccgtctgc accgcgcctt
     8881 ggcgcaattc atgctcgata cgcacatgct gcaacacggc tacaccgagc attacacgcc
     8941 ttatatcgtt gacgatacga cgctgcaagg cacaggtcag ctgcccaaat ttgcagaaga
     9001 tttgttccac gttacccgcg gcggcgatga aaccaaaacc acgcaatatc tgattccgac
     9061 agccgaagtt accctgacca ataccgttgc cggcagcatt atcccgtccg aacaactgcc
     9121 gctgaagctg accgcgcatt cgccctgttt ccgcagtgaa gcgggatcat acggcaaaga
     9181 cacgcgcggc ctaatccgcc agcaccagtt cgacaaagta gaaatggtac aaatcgttca
     9241 tcccgaaaaa tcatacggcg cgctggaaga aatggtcggc catgccgaaa acatcctgaa
     9301 ggctttggaa ctgccctacc gcgtgattac cctgtgtacc ggcgacatgg gtttcagcgc
     9361 ggccaaaacg tatgacttgg aagtttgggt tcccgcacaa aatacctacc gcgaaatctc
     9421 aagctgctcc aactgcgaag atttccaagc acgccgcatg aaggcgcgtt tcaaagacga
     9481 aaacggcaaa aaccgcttgg tacatacctt aaacggctcc ggtttggcag tcggtcgcac
     9541 tttggtcgcg gttttggaaa accatcaaaa cgccgacggc agcatcaata tccccgccgc
     9601 actgcaaccg tatatgggcg gtgttaccaa gttggaagtg aaataagcct taaccctgaa
     9661 cataaatgcc gtctgaaacc tgtttcagac ggcatttcct ttaaactctt aaaacacatc
     9721 aaccgtcggc acgaaccgca ttgccgcaat cgccggtctg tccgacctcg cggatattgg
     9781 acagcgtaac ttccgaaata ttacccaacg cctcttccgt caaaaatgcc tgatgtccgg
     9841 taaacagtac gttatgacaa gacgacaggc ggcggaacac gtcgtcggta atcacatcgt
     9901 tggatttgtc ttcaaaaaac agctcgcgct cgttctcgta cacatccatg cccaatgcac
     9961 cgattttccg gcatttcaac gcctcgatgg cggcggcgct gtcaatcagc ccgccccggc
    10021 tggtgttgat aatcatcacg ccgtctttca ttttgtcgaa cgccgcttcg ttcagcatat
    10081 agtggttttc cggcgtggcg ggacaatgca gcgtgatgat gtccgatcgg gcatacagct
    10141 cgtccaaatc cacatacctg ccgccgagtt tttccacttc ggggttgcaa aacggatcgt
    10201 aagccagcag gttcataccg aaacccttta aaatccgcat cgttgcgata ccgattttcc
    10261 ccgtgccgat aacgcccgcc gttttgccgt acatattgaa gccggtcaga ccttccagcg
    10321 aaaaattcgc atcgcgggta cgctggtagg ctttgtggat acggcggttc aaagtcagca
    10381 tcagaccgac cgtatgttcc gcaaccgatt cgggcgaata ggcaggcacg cgcacgactt
    10441 tcaagcccaa ctcttcagcc gccttcaaat ccacattatt gaagccggca caacgcaacg
    10501 ccacagtttt cacgccaatt tgcgccaatt tttccaacac gggccggctg gcgtcgtcgt
    10561 ttacaaaaat acaggccgct tccgcgcctt ccgccatttt cgccgttttc gcatccagca
    10621 tgaaatcaaa aaactccagc tcgaagccga aatgccggtt ggcgcgggta aaatgttcgc
    10681 ggtcatagct tttcgtaccg taaatcgcaa tcttcatcaa tatgtccagt tgtcgtctat
    10741 ggttgagaaa cggcataata caccgaattc aaacaaatca gtagaatatg gcggattaaa
    10801 attgatttca tgcacggcat ttccatttca aaacacaaaa ctcaatcgcc catcgccgcc
    10861 agaagctccg cctgatgttc ggcaatcagg gcatcggtga tttctgccaa atcgccgtcc
    10921 atcacaaaat ccagcttgtg cagggtgagg ttgatgcggt ggtctgttac cctgccttgg
    10981 ggatagttgt aggtgcggat gcgttcgctg cggtcgccgc tgccgatgag ggatttgcgt
    11041 tcggcggctt ctttggcttg gacttcgcgt ttttgcgcgt cgttcaggcg ggcggcgagg
    11101 actttcatcg cctgcgcttt gttggcgtgt tggctgcggc cgtcttggca ttcgaccacc
    11161 atgcctgtcg gcaagtgggt aatgcggacg gcggagtcgg ttttgttaat gtgctgaccg
    11221 cccgcgccgg atgcgcggaa ggtatcggtg cgcaggtcgg cggggttcag ttcgatgtct
    11281 tcgagctcgt ccgcttcggg catgacggca acggtacagg cggaggtgtg gatgcggcct
    11341 tggctttcgg tggcggggac gcgctgcacg cggtgtccgc ccgattcaaa tttcagacgg
    11401 ctgtacgcgc cgagtccgac aatacgggcg atgacttctt tatagccgcc caattcgctt
    11461 tcgttggcgg acacgatttc aacctgccag cggttgcgtt cggcgtagcg gctgtacata
    11521 cgcagcaaat cgccggcaaa cagcgcggct tcgtcgccgc ccgtgccggc gcgtatttcg
    11581 ataaagatgt ttttgtcgtc gtcggcatct ttgggcagca gcagtttttg caattcggta
    11641 tccagttcgt cgattttggc tttcgccgct tcgatttctt cggcggcaaa gtctttcatt
    11701 tcggggtcgg acaacatttc ttcggcatcc gccaagtcgc tttgggcaag ccgatagttt
    11761 tggaatactt cgacgacggg ggtcagttcg gcgtgttcgc gcgtgagctt gcggtagttg
    11821 tccatatcgg atgtggcttc gggttgccct aaaaggtggg taacttcttc caaccggtcg
    11881 ccgagttgtt gcagtttttc taagatagac ggcttcataa ttcttccata acaaacgccg
    11941 cctgaatttc agacggcatc aaaacgcggt cattataata tattttctga atattcaaaa
    12001 agataatcta gggacggagc agactgtcgg cattgcgttc cgttatcgcg gcgatttccg
    12061 ccgcgccggt accgcgtatt tccgcagcaa tttcggcaat ccgaagaatg ttggcaggcg
    12121 tattgacggt gttttccaac atgaacgggc tatccgtttc caatacgaaa tccccgtcgt
    12181 tcaaggcttt aagcgtatcg cgcactttac gcgcgttcgg attgagcagc agcgaaccga
    12241 tgccgatttt gaaccccagt tttgtcaaca cgcgcgcttc ttccgcgctg cctgagaaag
    12301 cgtgaacgat gccgccttga gtaaagcctg tctgtttgac ggcggcggcg atgtcggcgg
    12361 tggctttgag attatggata atcacgcggc ggcgcagggt ttgcgcgatg gcaagctggc
    12421 ggctaaaaac ttgaatttgc cgttcacgct gcggcggcgt ttgggttttg tcgtaaaaat
    12481 ccaagccgat ttcgccgacc cacgctcggg ggtaacgcac caatacggct tccaaaccgg
    12541 aaaaatcctg ttccgcaatg ccgtctgaaa accaaggatg gatgcccagc gcaatacgga
    12601 tttgaccgtg ttcggacggc atttccgaca gttccgccac gtcctgccaa tcctgcggac
    12661 aggtggcggg aacgataaac cgccacacgc ccgcctgtcg cgcttcggca agcacctgcg
    12721 ccagattgcc gcgcaaaacg gaatcggcaa gatggcaatg tgtgtcggtc agcctcatct
    12781 tcacaccagc cccaaccgct gcaactcgtg tttcaccccg tccgcgcccc atccttcgga
    12841 aacggcaagc gtcatcaatg cggttgcggt ttccaaattg catttgccgc cgttgaccac
    12901 gcccgcccga cgcagcgcgt cgccctgtgc gtaaacggcg gcagcgcaac cctgcggcac
    12961 ttggctgatg ttaagcaaca atttgccttg ctgcgtaaag tcttgcacgg cgcggatgaa
    13021 gccttcgccg gcggaggtat tgccgtgtcc gtagctttgc aggataaggg cttgggcggg
    13081 aagctgtccg agcccgtcgg caagttcttg gacggcaaag ccggggataa gcgtgcggac
    13141 ggcgattttt gcctgcgggt cgggataacg gatttcgagg ccgtctgaaa catctgccgc
    13201 gtcctgattc gggatgcgga cattgtgcca gccccgggtt tcgtcccact cggcaagtgc
    13261 gccgaaatgg gcattgccga aaccggcggc ggtttccgtg ctgattttgc tgctgccgac
    13321 ggcgggatac agtttgccgt caaaggcaat aagcgtctgc ttcaatccga gtgggaatgc
    13381 ggcaacggca gtcaccagat tgcgcggagc gtcgctgccc tctgcgttgt acggccattg
    13441 cgaaccggtc aggacgatcg gtttgtccaa accttgcagg gcgagggcga acatattggc
    13501 ggtataggcg agtgtgtccg tgccgtgcag caccaaaaca ccgtcgtact gcggcagcgc
    13561 ggcggcaatg atgtccagcc aagcgcacca gttttgcagt tggacggcgg aagaatcaat
    13621 cagcggctca caaacgtgcc aatcgaaatc catgccgtct gaaaacggcg cgagtgcctg
    13681 cccgaccagc gcggtatcgg ggcgcaagcc cgcactgctt tgcgtcatgc cgatggtgcc
    13741 gccggtataa aggacaaaaa ttttctgttt catggctcat tctgaaaatg caaagaccgc
    13801 ctgaaacgcg aaatgcgtcc ggacggtcga aaatccgatt tactgctgct tctgtgccgc
    13861 ttttttcgct gccttttccg ccttgcgttt ggcgcgtttt tcgctcaatt gtgcgcggta
    13921 aagctgataa tgtcggcgtt tgcgccacca gaaccacgcc agcgccgccg ccagcacgcc
    13981 caatgcgatg aagatgcccg attgcaggct gtgcattttc gccatcagcc aatcgatgtt
    14041 gtgcgcgccg tactcgccca agtaaatcca aacgggcacg gaaatcagcg cggccagccc
    14101 gtccataatc agaaagcgca gatacgatac tttgcggctg atgccggcgg taacgaaaac
    14161 ggcagtccgc aaacccggca ggaaacgggc gacaaacaga acccagttgc cgtatttgtc
    14221 gaatttttcc tgaacctgcg cgtaacgttt cggcgtcatg atgcgcgcaa tcagtttgaa
    14281 cttgaggatt ttctgccccc agatgcgtcc ggcggcaaac atcacgccgt cgcccgccaa
    14341 cacgccgagc ataccgaccg caaacataat atgcggattg gtataaccca tacccgaaat
    14401 cacgccgccc gttaccaagg tcaaatcttc gggaatcggc acgccgaaac cgcagatgac
    14461 caaaacgaaa aacacggccg catagccgta ttcgacaaaa aaggcttcca aaagggcaaa
    14521 catagcggat attccattgt cggagataaa aagtcagaac aagccgaaac attttctgcg
    14581 cgaaacggca ttctatcaaa gattatgccg tctgaaagcg gcaggggggg cagattcgcg
    14641 cccccgccgg acgttcagac ggcatttaaa caggaaaacc gccgctgttg aaacggtttt
    14701 gcctgatttt gcctaaatgc cgccgatggc ggcggcgata cgctccgccc cgtcgcgcgc
    14761 ccaatcggcc tgacgcgcct cgaccatcac gcgcacgacg ggttcggttc ccgaagcgcg
    14821 caacacgaca cgccctttgc cttcgagttc tttttccact tcggccaaca cgtctttcga
    14881 agcctcctgc catttctgac ccttttggat gcgcacgtta atcatcgttt gcggatacgg
    14941 ctgccaatcg gcgcaaacgg cggcgaggtc ttggttcagg atttgcagcg ccgccaagac
    15001 ttgcagcgcg gaaataatgc cgtcgccggt gttatgtttg tccatgcaca aaatatggcc
    15061 gctggcttcg ccgccgatga gccagccgcg ttggttcagc tgttccaaca catagcggtc
    15121 gccgactttg gcgcggcaga aatcgacgcc ctgctctttc agggcgattt ccatcgccat
    15181 attggtcatg accgttccga ccacgccgcc gatgttgata ccttctcggg tgcgggcttt
    15241 ggcgatgacg taaatcaggc tgtcgccgtc gtaaacctgc ctgtttttat cgaccatcat
    15301 caggcggtcg ccatcgccgt ccaaggcaat accgtaatcg gcttcgtttt gcaacacggc
    15361 ggcttggagg gttttggtat gggtcgcgcc gcatttttcg ttgatgttgt agccgttggg
    15421 ttcgttgccg atgctgacga cctgtgcgcc gagttcgtgg aacactttgg gtgcaacgcc
    15481 gtatcctgca ccgttggcgg tatcgataac caacttcaaa ccccgaaggt cggaatggcc
    15541 ggggaaggtg gatttgcaaa actcgatata gcggtcgtcc gcaccgctga tgcggcgggc
    15601 gcgtccgaga cgtgcggacg gttgggtttt catttcttca tcgattttgg cttcgatttc
    15661 caactcgact tcatcggaaa gtttcacgcc gccttcggca aagaatttga tgccgttgtc
    15721 ggaataggtg ttgtgcgacg cggaaatcat cacgccggcg gacaggcgca atgcgcgggt
    15781 cagataagcc acaccgggcg tgggcaacgg cccggtctgt accacattca cacccgccgc
    15841 cgtaaagccc gctaccagcg cggcttccag catatagcct gaaatgcgcg tgtctttgcc
    15901 gatgaggacg gtcggtttct gatcggtatc gtgctgcacc agcacctgcc ccgccgcata
    15961 gccgagtttc aatacaaaat cgggcgtaat cggaaactga ccgacttcgc cgcgcacgcc
    16021 gtccgtgccg aaatattttt ttgccatcat ttgctccgag aatgtgaacc gttgtccgag
    16081 attatacagt cagtttgtgc cttgctgtct gcaccgttga tgccgtctga agccgccccg
    16141 tccttttcag acggcatgaa gtatgtgaac cgctgtttac agattgatgc ccaacgcttc
    16201 ccacgccttc aaagcatccg ccgtcgcctt cacatcatgc acccgcacga tttgcacgcc
    16261 gcgcgccacg gaagccagcg ccgccgccac gctgccgtgt acgcgtgccg ccgcgtctgc
    16321 ctcaccggtc agctcgccta tcatgctttt gcgcgatacg ccgattagca atggcaaacc
    16381 ggtttccgcc atcaattcgg gtaaatgccg catcagtgcg atattgtgtt gcaaggtttt
    16441 gccgaagccg aaaccggggt cgagtgtgat gcgttgcggg gcgatgcctg ccgcgatgca
    16501 ttccgccgcc cgcgctttca aataccgcgc cacttcaccg acaacatcct gatatttcgg
    16561 attaatctgc atattcttag gcaagccctg catatgcatc aggcaaatgc ccgtatccgc
    16621 ctgacacgcc agcaattcga gcgcgccttc gtcggtcaac gccgccacat cgttaataat
    16681 atcgatgccg ccgagtgcca acgctttttc cataaccacc gtgcggcgcg tgtccaaact
    16741 gacgggaaca ccccaccccg ccacttctgc caatacaggc tcaacccgcg cccattcttc
    16801 ttcaggcgaa acataatccg cacccggccg cgtcgattcg ccgccgatgt cgagaatgtc
    16861 cgcaccctct ttcaaaagcc gttcggcatg cgccaaagct gtttgggcgt tttgcgaata
    16921 cgcgccgccg tcggacaaag aatcgggcgt gagattcacg atgcccatga ttttcggttt
    16981 gtccaaaccg attttaaacc gtcctgcctg ccaaacgtgt cgtgccatct gaactcctcc
    17041 caaaataaaa aacagattat atgccgtctg aaaccgtctt gtgcgcttca gacggcaccg
    17101 ctattcgggc ggcagacggc atgttgtccg aatgtctgct ccgcctttga atctgccggc
    17161 atgcctgcta tccgcccgcc ttttcaaaac aggttccgac gattccgcac gcgcctgccg
    17221 cctttgccaa gccgtacagg atttcctgcg gcatatcgcg gctccataat cccgtaatat
    17281 tcgcaatcac gggcagatgg ctgatttggc ggactttcac gatggattcg acatccaaac
    17341 ggtagggatg gcctttggta tggcccaaca cgcccgactc gcccagaatc aggtggcggt
    17401 tgccgcgcga gacgacatat tctgcggcat tcaaccaatc ttcggcagaa tggtgcttgt
    17461 ctttacacag aaccaaggga atgttcaggc ttccggcttc attcaatacg gcaagatcgg
    17521 acatcagccc gccgcccaaa tacaggatgt ccgctcccgc attcaaagcc gcttcgacat
    17581 ggcggacgtt gcgaacgcgc accaatacgg gtttccctgc gccatgcgcc gatgcggcct
    17641 gttccgccaa ccgtctgcac cgtccccgcc cttcatccgc acttaaagtg tcgtataagt
    17701 ttgccgaagt gaaaaacgga tccagaaaca ctgcatccgc attgctccat actgacggtt
    17761 ctgcagcgat acggacggtt tccccgccgc cgaaagccac gcctttggcg gcaacgcggc
    17821 tgtcttccgc ccgattttcc cgactgacgg ttttccatgt gtccaaaatg cggacggctt
    17881 tctcgacctc cggcagcgtc tgtacctccc tgacgctcaa aaccctatcg tcgccgattg
    17941 cgccgatgac ggtacgctcg tcgccgtgag aaatgtgttc tcgcagacct ctgctgcgga
    18001 tgaaggcgac aacgccggca atgtccgctt cggcggcacg cctgctcatg acaataatca
    18061 tatttcctcc tgacacaaga gacggcccgc ccaaaatagg atttttgcaa gccgtgttat
    18121 actgtggcgt gttttacaga ttgttcgggc tatggattta ttatcggttt tccacaaata
    18181 ccgtctgaaa tatgcggtgg cggtgctgac gatgctgctt ttggcggcag tcgggctgca
    18241 cgcttccgta tatcgcacct tcacgcccga aaacatccgc agccgcctcc aacaaagcat
    18301 tgcccatact caccggaaaa tctcgtttga tgcggatata cggcgcaggc ttctgccccg
    18361 cccgaccgtc atcctgaaaa acctgaccat taccgaaccc gacggcggcc gggtcgccgt
    18421 ttccgtcaaa gaaaccaaaa tcggattgag ctggaaaaac ctgtggtcgg atcggataca
    18481 ggttgaaaaa tgggtggttt cgggtgcgga tcttgccctg acgcgcgaca gaaacggcgc
    18541 ttggaacatc caagacctgt tcgacggcgc gaaacactcc gcctcagtca accgcattat
    18601 cgtcgaaaat agcaccgtcc gcctcaattt cctgcagcaa cagcttatcc tgaaggaaat
    18661 cagcctcaac ctgcaatccc ccgattcgtc ggggcagcag tttgaaagtt cgggcatact
    18721 ggtttggaga aagctgtccg tcccgtggaa aagcaggggg ctgttccttt cagacggcat
    18781 cggcacgccc gaaatctcac cgttccattt tgaagcttcc acttcgctgg acggacacgg
    18841 catcaccatt tccaccaccg gcagcccttc tgtccgcttc aacgccggcg gagcggatgc
    18901 cgccggcctc ggcctgcgtg cagacacttc cttccgcaac ctccacctga ccgcgcaaat
    18961 ccccgcattg gcactcaaaa acaacagcat caaaaccggc acggtcaacg gcacgtttac
    19021 cgccggcggc gaatatgccc gatgggacgg ttcgttcaaa ctcgacaaag ccaacctgca
    19081 ctccggcatc gccaacatcg gcaacgccga aatctccggc agcttcaaaa caccgcgcct
    19141 tcaaaccaat ttctccctcg gctcgccgtt ggtttggagt cgggacaacg ggctggacgc
    19201 cccgcgcctg cacatatcga cccttcagga taccgtcgac cgcctgccgc aaccccgttt
    19261 catcagccgg ctcgacggtt cgctgtccat accgaatctg caaaattgga atgccgaatt
    19321 aaacggcaca ttcgaccgcc aacccgttgc cgcaaaattc aaatatacgc gggaaggcgc
    19381 accgcgcctg gaagccgccg ccgcgctgca aaaattaaac cccgccccct atcttgacga
    19441 atttcggcaa caaaacggca aaatattccc cgacatcctc ggcaggctgt ccggcaacgt
    19501 cgaggcacac ctcaaaatcg gcagcatcca actccccggc ttgcaactgg acgatatgga
    19561 aacctacctc cacgccgaca aagaccatat cgcgctcagc cgtttcaagt cagggcttta
    19621 cggcggccat accgaaggcg gcatcagcat cgccaacacc cgtcccgcca cttaccgcct
    19681 gcaacagaat gcaagcaaca tccaaatcca accgctgctg caagacctgt tcggcttcca
    19741 cagcttcagc ggcaacggcg atgcggtcat cgacctgacc gcaagcggcg aaaaccgcaa
    19801 acagcttatc cgctcgctgc aaggcagcct gtcgctgaat atttccaacg gcgcgtggca
    19861 cggcatcgat atggacagca ttttaaaaaa cggcctttcc ggaaaaatct cgggcagcac
    19921 acccttctac cgattcacgc tcaacagcga aatttcagac ggcatcagcc gccacatcga
    19981 taccgaactc ttctccgaca gcctctatgt taccagcaac ggctatacca atctggatac
    20041 gcaggaattg tctgaagatg tccttatccg caacgccgtc catccgaaaa acaaaccgat
    20101 tcccctgaaa atcaccggta cggtggacaa gccgtccatt accgtcgatt acggcaggct
    20161 gaccggcggc atcaattcgc gcaaagagaa acagaaaatc ctcgaagaca ccctgctgga
    20221 acaatggcag tggctcaaac ctaaagaacc gtaaataccc tgcgtacaaa aatgccgtct
    20281 gaaacacatt aatcttcaga cggcatgacc gtaaaaccta caaccccaat ttcccccaaa
    20341 tcccatcaat tttaaccgta accgcagggt cttttttgat tacccgtccc cattcgcggt
    20401 cggtttctcc cggccatttg ctggtcgcat ccaaacccat tttgccgccg agtccgctga
    20461 cggggctggc gaagtcgagg tagtcgatgg gcgtgttttc caccaaaacg gtgtcgcgga
    20521 cggggtccat gcgcgtggtt accgcccaga tgacttcttt ccagtcgcgc acgtttacat
    20581 cgtcatccac cacgatgatg aatttggtgt acataaactg gcgcaggaac gaccagcagc
    20641 ccgtcatcac gcgcttggcg tgtccggcgt actgtttttt catgctgacc accgccatgc
    20701 ggtaggaaca gccttcgggc ggcaggtaaa aatcggtgat ttcggggaac tgcttttgca
    20761 agagcggtac gaacacttcg ttcaatgcca cgcccaaaac agcgggttca tcgggaggtt
    20821 tgcctgtgta ggtcgaatgg taaatcgggt tttcgcgcat ggtgatgcgc tcgaccgtaa
    20881 atacagggaa atgatcctgc tcgttgtaat agccggtgtg gtcgccgtat gggccttcca
    20941 acgcggtttc gttcggatga atcacgcctt ccaatacaat ttcagcacgg gcaggcactt
    21001 gcaaatcgtt gccgatacat ttcaccagct ccgtccgcga accgcgcagc agtccggcaa
    21061 actggtattc gctcaaagta tcgggaacag gcgttaccgc tccgagaata gtggcagggt
    21121 cgcaaccgag cacgacggcg acgggatacg gcgtatcggg attgagtttg cggaactcct
    21181 gataatccaa cgcgccgccg cgatgcgaca gccagcgcat aatcagcttg tttttgccga
    21241 tgagttgttg gcggtaaatg ccgagatttt ggcgtttttt gtgcggccca cgcgtgacgg
    21301 tcaagcccca tgttaccagc ggcgcaacgt cttccggcca gcaatgctga atcggaagtt
    21361 tatacaaatc aacgttttcg ccttcccaca cgatttcttg acacggcgcg tttttcacca
    21421 cgttcggcgc catgctccaa atgtctttca gcagcggcag tttggaaaac gcatctttga
    21481 tgcctttggg cggttcgggt tctttcaaat acgccagcgt ctgcccgatt tcgcgcagct
    21541 tggacacgct gtccgctccc atgcccatcg ccacacgttc gggcgtaccg aacaggtttg
    21601 ccaacacggg ataaccgtag cgcgtaccgt cgggcttaac cgggttttca aacagcaacg
    21661 ccggcccttc ggcgcgcagc acgcggtcgg cgatttcggt catttccaaa tgcggggaaa
    21721 cggggtgcgc gatgcgtttg agtttgccct gctgctcgag catggcgatg aagtcgcgca
    21781 ggtctttgta tttcatattc atcctttttg tccttttatc ctgagcaatc cgattcggat
    21841 accgccccta tccttgcctg tgcctcggca tattctatgc cgtgataaaa gtcgcgtacc
    21901 agcggatgtc cgccgctttg atgaagttgc agcaaagggc gttgaccatc gggttgggta
    21961 acgacattgc aatgcaaacc gaaggtgtcg gattcgtaag ggggcagccg gttgcagatc
    22021 atcccgaaat aaacggcgtt ttcagagttg tcgtaaaagc ggctttgata gtcgttaaaa
    22081 ctcttttcgc tgacggacac ccacacgccg tattccagcg tttcctcatg cccgataatc
    22141 ggaataggca gcgccgcgcg gataaagcgg tcggtttggt cggaatagcg gatgatgcag
    22201 aaatcagaat cgcattccgc ttgataagca atgcgttctt cttcactgag ttgattatag
    22261 ggataggggg cggtaaagcc ggttgcgggc atatcttcat gtttttcgcc gcaggaagtg
    22321 caagtgtgca taaggtttca gactttcaac acaagtttgc ggtaaagcca ttcgccggca
    22381 aacagcatcc ccatcaatac ataggcaatc acgcctgtat aaaccgccca ccaatcatat
    22441 cgccccaacc gggccaacaa agcggcaagc gtcccgttgg caataaagaa tacgcaccaa
    22501 acctgcgtta cccggcgggt atagcgcacg gctttttcag gcaggtcggg ctgttgcagc
    22561 cgcgcaagtt tttcaatcac cgtctgcccg gcaaacaggc tgctgccgaa caccgccaac
    22621 atcatcaaat taacgaggac aggataccaa tacattgaat cacgccgccc gaacaccaat
    22681 actgcggcaa aaaacagtgt aatatagtgg attaaattta aatcaggaca aggcggcgaa
    22741 gccgcagaca gtacaaatag tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa
    22801 tccactatac cacaaagcgg gataggcaat gcttaatacg gtcaaaaaaa tatgtccgaa
    22861 aaaaccgggt ttcattttga atccgcacaa acgttttcag acggcatccg ataaaaacat
    22921 gccgtctgaa aaataattag aaatacccga ttagccggcc tgaatcttca ataccgcctg
    22981 taccacgtcg ttgacggtgc ggacattgcg gaaatcttca gcctgcagct tgcgggctgc
    23041 cacaaccatt cacgattgcg atatacccgg cggcattccc gactgccgtt cagcagaaaa
    23101 cgcacccatt ccaaaccgct ccaatatgcc tcgggcagca taccggcttc agacggcata
    23161 tcgtccgaag cagacaaagt caggctgtaa cgcgtccctt tggtcagaac catcgccaaa
    23221 gcataagcaa acggcgcgcg cgttgccgat acggcatatc cttccggcag cggatcgtcc
    23281 gccgccaaaa ccaaaaccga cccgcatccc tcttccaaca gggacgccgc ttccgccaat
    23341 gccgtttcca caccgtcggc acacacggcc aatgccgtct gctcgctcat atcccgcctc
    23401 aatatcgacc attgccccgc cgtcgcattg tgcaccgaca aaccgaacga agtcggcgac
    23461 acggtatgcg atttcaacag ttccaaccac aaatcgaaac tacgcgccat ttccccgtcg
    23521 tgcgaggcat aaactaccgg actgccggga tgggcggagg caatgtccca agccgcgtcg
    23581 cataccaaac gcgccgcctt actcaaacgg cggcgccgca tagcgggcag gaacggcaat
    23641 tcccgcctga catcgggcaa accgtcggca aaatccggac attccgccca ctgcctccac
    23701 tgggccatat cgcgcatttt gctgcccgaa acccgccagt cggcgatgtc gaagtggaac
    23761 cggcaaataa tcggcggcat agtttctttc aaaaatttac actgtgccgc attctaacca
    23821 aagcccatcc ccctgacaat gccgaaattc aaacgcatcc acgccatttt ttccgacaac
    23881 gccgcccctc ggcaaaccgc ccgaattagc ctgaatttac atttatcatt gataatgccc
    23941 gattaccgac accgcctccc tgctgccgca cagcgggcgt atggttctga tagaccgcat
    24001 tacccgatac ggcgatgatt ttgtcgaagc aggggcgcag gtaaaacccg accacatcct
    24061 gctggccggc ggcatactgc cctatacggc atttatcgaa ctgatggcgc aggctgtcgg
    24121 cgcatatgcc ggcatccaag cccgaaaaaa cgcacaaccg gtccggctcg gcttcctgcc
    24181 cggcacgcgc aaacttgaaa tcttcgccca atccgtccct gtcggaacac atttgccggc
    24241 aacggcgcat atgtctatcc aagatgccgg ggtatgggcg tgtccgactg cgaactgcgt
    24301 tggacggacg cgccggaaac cttgtctgaa acactccttt cagacggcat tttggcgcgc
    24361 gcctcactca acgtgtacag ccccgaacac catgacggaa caactgacgc cgtctgaaca
    24421 gacacgcaca tacggagaac aaccatgact gaaaccgtcc tgattaccgg ctcaaacaga
    24481 ggcataggca aagccgccgc actcggtttt ggcggacgac ggctttgata tcgccgtcca
    24541 ctgccgcagc cgccgcgacg aagccgaagc cgtggcggaa gaaatccgcg ctttgggcag
    24601 aaatgcgcgc gtgttgcagt ttgacgtgtc cgaccgcgaa gcctgccgcg agattctgac
    24661 cgccgacatc gaagcaaacg gcgcgtatta cggcgtggtg ttgaacgccg gcctgacgcg
    24721 cgacaatgcc ttccccgcgt tttcagacga cgattgggat gtggtgccgc ggactaattt
    24781 ggacggtttt tacaatgtat tgcatccgct ggttatgccg atgatacgcc gccgcaaagc
    24841 cggacggatt gtgtgtatgg catcggtgtc cggtctgacg ggcaaccggg ggcaggtcaa
    24901 ttacagcgcg tcaaaagcgg gcattatcgg cgcggcaaaa gccttggcgg tcgaaccggc
    24961 gaaacgcaaa atcaccgtca actgcgtggc gccgggtttg atcgatacgg agattgtcga
    25021 tgaaaacgta cccgtcggag aaattttgaa agccgtcccc gccgcgcgta tgggactgcc
    25081 ggaagaagtg gcgcacgcag tgcacttcct gatggatgaa aaagcggcgt atatcacgcg
    25141 ccaggtgatt gcggtgaacg gaggtttgtg ttgaatacca gaagggtcgc agtaacgggc
    25201 ataggcggca ttaccgcctt cggccgggat tggcaaagca tacaggcagc attcaaagcc
    25261 gaaaaaaacg ccgtcaaata tatggattgg cgcgaacgtt tccccgaatt ggaagcgcaa
    25321 ctgggtgcgc cgattgagga ttacgcgccg ccgaaacatt ggacgcgcaa gcggctcaga
    25381 agtatggggc gcgtgtcgta cctgtgcgtc gatgcggcgg agcaggcgct ggcggatgcc
    25441 ggtttgctcg gagacgaaag cattaccgac ggacggatgg gcgttgcctg cggctcttcc
    25501 ggcggcggca ccaaagacat cggagatgtg ggagaattgt tgctgaccgg cacgtcgcgc
    25561 aacttcggcg ccaataccta tgtgcgtatg atgccgcaca ccgccgacgc caatatcggc
    25621 atctttttcg gattaacaag gacgcatcat cccgacatcg agcgcgtgtt cttcgggcag
    25681 ccaaggcata ggttatgctt acgaggccat caaatacggt ctgaccgata tgatgctggc
    25741 gggcggcggc gaagaatttt gcccgtccga agtgtatgtt ttcgactcgc tctatgccgc
    25801 cagccgccgc aacggcgaac cggaagagac cccgcgtcca tacgacgcga accgcgacgg
    25861 gctggtcatc ggagaaaagg cgcggggatt ttcgtattgg aagaattgga acacgccaaa
    25921 cggcgcggtg cgaaaattta cgccgaactc gtcggctacg gcgccaacag cgacggcatc
    25981 aatatcggcg aaggcgcagc cgtattcatc atgacgcgcg atgcggattt ttccggcggt
    26041 atgcagcttc tgggttacgg cgcaagcagc gatgcctacc atatttccac gccccgcccc
    26101 gacgcaaagg cgcaatcctc gcctttcaga cggcattgca gcacgccggc cttgcgcccg
    26161 aagacatcgg ccggattaat ctgcacggca ccgggacgca ccacaacgac agtatggaaa
    26221 gccgcgccgt tgcagcggtt ttcggcaaca atacgccctg cacgtccgcc aagccgcaaa
    26281 ccggacacac gctgggcgcg gcgggcgcaa tcgaagccgc gttcgcgtgg ggcattgccg
    26341 accggcaaag caatcccgaa gggaaacttc cgccccggct ttgggacggc cagaacgacc
    26401 ccgacctgcc cgccattaac ctgaccggcg acggctggga aaccgaaaaa cgcattgccg
    26461 ccagctcgtc gtttgccttc gggggaagca actgcgtctt aatcatcgga tgaaataagt
    26521 ttgtcaatcc caccgctatg ctatacaata cgcgcctact cttgacgggt ctgtagctca
    26581 ggggttagag caggggactc ataatccctt ggtcgtgggt tcgaacccca ccggacccac
    26641 caattcccaa gcccggacgt atgtttgggc ttttttgccg ccctgtgaaa ccaaaatgct
    26701 ttgagaaacc ttgataatga aaaaagtcag cgtattgatt gttgccaaaa acgaagcaaa
    26761 ccacattcgg gaatgtattg aaagttgccg tttcgataaa gaagttatcg ttatcgacga
    26821 ccatagcgcc gacaacactg ccgaaattgc cgagggtttg ggtgcaaaag tcttcagacg
    26881 gcatttgaac ggggatttcg gagcgcaaaa aacatttgcc atcgaacagg caggcggaga
    26941 atgggttttc ctgattgatg cagacgaacg ctgcacgccg gaactatctg atgaaatctc
    27001 aaaaattgtc cgaaccggcg attatgccgc ctattttgtc gaacgccgca accttttccc
    27061 caaccatccc gccacacacg gcgcgatgcg tcccgacagc gtatgccgtc tgatgccgaa
    27121 aaaaggcggt tcggtgcaag gcaaagtaca cgaaaccgta cagaccccct accccgaacg
    27181 ccgtctgaaa cattttatgt accattacac gtacgacaac tgggaacaat atttcaacaa
    27241 gttcaacaaa tatacttcca tctcggccga gaaataccgg gagcagggaa agcccgtgag
    27301 tttcgttagg gacattatcc tccgtccgat ttggggtttt ttcaaaattt atatcctgaa
    27361 caaagggttt cttgatggaa aaatgggttg gattatgtcc gtcaaccaca gctattacac
    27421 gatgattaaa tatgtcaaac tatattatct gtacaaatcc ggcggaaaat tttaaatgga
    27481 aaaagaattc aggatattaa atatcgtatc ggccaagatt tggggtgggg gcgaacaata
    27541 tgtctatgat gtttcaaaag cattgggact tcggggctgc accatgttta ccgccgtcaa
    27601 taaaaatgat gaattgatgc gcagacgctt ttccgaagtt tcttccgttt tcacaacgcg
    27661 ccttcacacg ttcaacgggc tgttttcgct ctacgcgctt acccgcttta tccgggaaaa
    27721 ccacatttcc cacctgatga tacacaccgg caaaattgcc gccttatccg tacttttgaa
    27781 aaaactgacc ggggtgcgcc tgatatttgt caaacataat gtcgtcgcca acaaaaccga
    27841 tttttatcac cgcctgatac agaaaaacac cgaccgcttt atttgcgttt cccgtctggt
    27901 ttacgatgtg caaaccgccg acaatccctt taaagaaaaa taccggattg ttcataacgg
    27961 tatcgatacc ggccggttcc ccccgtctca agaaaaaccc gacagccgtt tttttaccgt
    28021 cgcctacgcc ggcaggatca gtccggaaaa aggattggaa aacctgattg aagcctgtgt
    28081 gatactgcat cggaaatatc ctcaaatcag gctcaaattg gcagggcacg gacatccgga
    28141 ttatatgtgc cgcctgaagc ggggcgtatc tgcttcggga gcagaaccat ttgtttcttt
    28201 tgaagggttt accgaaaaac ttgcttcgtt ttaccgccaa agcgatgtcg tggttttgcc
    28261 cagcctcgtc ccggaggcat tcggtttgtc attatgcgag gcgatgtact gccgaacggc
    28321 ggtgatttcc aatactttgg gtgcgcaaaa ggaaattatc gaacatcatc aatcggggat
    28381 tctgctggac aggcttacgc ctgaatcttt ggcggacgaa atcgaacgcc tcgtcttaaa
    28441 ccccgaagca aaaaacgcac tggcaacggc aggacatcaa tgcgtcgccg cccgtttcac
    28501 catcaaccat accgccgaca aattattgga tgcaatataa gccgctttca gacggcctat
    28561 gccgtctgaa agcctttgat gcaacaaacc gccaaattat attcgttcat tggaaaaaaa
    28621 caccccgaat tcatccttca aaataagaaa atcccaatat cccccgatat cgcgcagcct
    28681 attggcaaag ttttgcagcg tcttccccgg cttgtgccgc cgcgtcaagt gctttgttac
    28741 aatgcactac cttcacattt cttaataaat tttatgagta accatacttc ttggtcgtcc
    28801 aaaatcggtt tcgtacttgc tgcggcaggt tcggccatcg gtttgggcgc gatttggaaa
    28861 tttccttata cggcgggcac caacggcggc gcggtgtttt tcctgctgtt tttgatattt
    28921 accgtcttgg tcgccctgcc cgtccagctt gccgaatttt atatcgggcg cacgggcggt
    28981 aaaaatgccg tcgattcctt cagggttctg cgtccgggta cgcaatggct ttgggtcggg
    29041 cgcatgggcg ttgccgcctg ctttattttg ctgtcgtttt acagcgtggt cggcggatgg
    29101 gtattgaatt atgtcgtcca cagttttaca ggggcaatcc atgcgggagc ggactttgaa
    29161 gccctgttcg gcacaacgat ttccaatccg gcaggttcgc tgtcctatca ggcactgttt
    29221 atgctgatta cggtttgggt ggtcaaaggc ggcatttcag acggcattga aaaggcaaac
    29281 cgttatctga tgccggggct gtttatcctc tttattgcgc tggctgtccg ttcgctgacg
    29341 ctgccggatg caatggaggg cgtgtctttc ctgctcaaac ccaattggtc gtactttaaa
    29401 gccgatacga tgattacggc tttgggccag gcgttttttg ccctgagcat cggcgtttcc
    29461 gccatgatta cctatgcttc gtatttggga aaagatcagg atatgttccg ttccggccat
    29521 acgattatgt ggatgaacct cttggtttcc ctgcttgccg gcctggtgat tttcccggcg
    29581 gtattcgcct tcggttttga accgaaccag gggccgggat tgatttttat cgtattgccc
    29641 gcagtgttca tgaaaatgcc gttcggtacg gttttatttg cagtattcat gcttctggtc
    29701 gttttcgcca cgctgacttc ggcattttcg atgttggaaa cggtcattgc ctcaaccatc
    29761 cgccaagacg agcgcaaacg caaaaaacat acttggctta tcggcacggc tattttcatt
    29821 gtcggcatcc cgtccgcgct gtctttcggc gcatggggtg agtttaaggt tttcggcaaa
    29881 accatttttg atttgtggga ctatgttatt tccgccgtca ttatgccgat tggtgctttg
    29941 agtgtttcca tctttaccgc ctggattcag gacaagcagt ctgtgttaaa agatgccggc
    30001 gcgggcagca ccgtaccacg ggcagtgctg ctgctgtggc tgaatacctt gcgctacctt
    30061 gccccgattg ccattattat tgttttcgtc aattctttag gcatccttta aacataccgc
    30121 ccgacggcaa aatgccgtct gaaagccttt cagacggcat tttgcttcag attcaaccta
    30181 tttcgttcaa agtatagtgg attaaattta aatcaggaca aggcggcgaa gtcgcagaca
    30241 gtacagatag tacggcaagg cgaggcaacg ccgtaccggt ttttgttaat ccactatatt
    30301 gtccggcatg gccagcctaa ctttaagccg cctgctttcg gcaaccgacc gtatcagcgg
    30361 caaatccatc acggaaaacg ccgtcgacaa ggcatcggca accgccgcat catccgccat
    30421 tacgctcatg cttttataac gcggcgtact cacgccggtt cgcggatcga acaaatgggt
    30481 aagcctgccc gctttgtcca tcaccgtccc atagccgccc gaagtggcaa acgccttgtc
    30541 tttcatcgtg atatttgcca acacgccttc ttcgtcgtcc ggattgcgga tgccgacatt
    30601 ccacatccgc ctgccgtttg tatcaaaccc cctgatttcg cccatatcga ccagcgcggc
    30661 aggcactccg tttgctttaa gcagcgcaac aaccttgtcc gtgatatagc cttgcgcgat
    30721 gccgttcaag gacaaaccca tacccttttc ggcaaaacgg atttcacggt cgtcaaacga
    30781 gactttgccg aagccgaccc gtttcagggt ttccttcacg ctattctccg gcggcgtttc
    30841 cgcatcggga cgggcggcaa aataatcggc atacagtttc cacaacgcct gaaccgtcgg
    30901 atcgaacgcg ccttccgtca gcgcgtgaat atcgcggcca ggctcaacag ttccaaaaaa
    30961 tccgccggag gcgaagtcag ataaccgtcg cggttcagac ggctgatcag gctgtcttca
    31021 cggtaaaggc tgaacatttt ttccaaacgc gccacttccg ccaaaacctt attgacccaa
    31081 tccgccgcct gtctgtcgtc cacgccgaac aggcgcagct ccgcgccgga acccagcgcg
    31141 acacctttcc agaaaaacac attttcatcg cgttttttat ccatgttgcg tttttcgccg
    31201 ccggcggcaa aaggattcgg caaaaaagaa accgccgcac cggccacagc aacggcggca
    31261 gccgtcagaa aacgtctgcg cccgaaatgc ctgcccatac cgcctcctaa accgacacta
    31321 ccgccttgat gtgcggatgc ggatcgtagc cttccaactc gaaatcttca aacttgaagg
    31381 caaacaaatc cttgacttca ggattgattt tcatcacagg caaggcgcgc ggttctcgtt
    31441 ccaactgcaa tgcggcctgt tcgaaatggt tacggtacaa atgcgcgtcg ccaaacgtat
    31501 ggacaaactc gcccgcctcc agcccgcaca cttgcgccat catcatcgtc aacagcgcgt
    31561 agctggcaat attaaacggc acaccaagga aaatatctgc actacgctgg taaagctggc
    31621 aggacagttt gccgtcggca acgtaaaact gaaacagcgc gtggcagggc ggcaaggcca
    31681 tctcatcgac caaagccgga ttccacgccg acacaatcag gcggcgcgag tcggggtttt
    31741 tcttaatttg ttccaccaca ttggcgattt ggtcgatatg cctgccgtcg ggcacgggcc
    31801 agctgcgcca ttggtagccg taaaccgggc ccaagtcgcc gttttcgtcc gcccactcgt
    31861 cccaaatgga aacattgtta tccttcaggt atttgatatt ggtatcgcct ttgaggaacc
    31921 aaagcagctc gtggattatc gagcgcaaat gcagcttttt ggtcgtcagc agcggaaaac
    31981 ctttgcccaa gtcaaaacgc atctgataac cgaatacgga gcgcgtaccc gtaccggtgc
    32041 ggtctgattt gtccgtaccg ttgtcgagga cgtggcgcat caagtccaaa taggccttca
    32101 tcatcatctt tcatcaaatt aaacggcaca tattgtaaca tttccggcca acacccgagt
    32161 ccggacaaac gcgcaggccg ccccgccgga cgctcaaaac gcggatgaag gcaggcagga
    32221 ttgttggcaa tttcagccct ttttcacagc aaaagcaggc gtgaaaacaa aattatcttg
    32281 attggaatca aaaaatctag tttaacta
//
LOCUS       DAXGCP010000013        29878 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.013, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000013 DAXGCP010000000
VERSION     DAXGCP010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29878
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.013"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            86..1201
                     /gene="pilM"
                     /locus_tag="ACFJCW_000537"
     CDS             86..1201
                     /gene="pilM"
                     /locus_tag="ACFJCW_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HFC4150765.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIVASVPQ
                     NLATIEQLTYTAKDAELDLQGFVESSISEASSISLEEANYDYQVLSQSAVGEAVLSVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELADEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSAEQLNQLIQRTYQVTAEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAVRQKGIAQTVASQTNADVQ
                     CVHPARYFANDLKTDEQQFELDAPTLTKAFGLAVRGL"
     gene            1204..1803
                     /locus_tag="ACFJCW_000538"
     CDS             1204..1803
                     /locus_tag="ACFJCW_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HFC4150766.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINKQSEKNTLLEISIAHLDTELSEIQKLKQEKDAFLIKKNKIGELQIKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            1804..2451
                     /locus_tag="ACFJCW_000539"
     CDS             1804..2451
                     /locus_tag="ACFJCW_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HFC4150767.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLVVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKKLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            2469..3014
                     /locus_tag="ACFJCW_000540"
     CDS             2469..3014
                     /locus_tag="ACFJCW_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HFC4150768.1"
                     /translation="MKHYALLISFLALSACSQSSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETAKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIILNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            3033..5228
                     /gene="pilQ"
                     /locus_tag="ACFJCW_000541"
     CDS             3033..5228
                     /gene="pilQ"
                     /locus_tag="ACFJCW_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HFC4150769.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPFTESVV
                     SVSAPFSPAKQQAAASAKQQAATPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQ
                     HDHIIVTLKNHTLPTALQRSLDVADFKTPVQKVTLKRLNNDTQLIITTTGNWELVNKS
                     AAPGYFTFQVLPKKQNLESGGVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNI
                     VASDSVNGKMTLSLKDVPWDQALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQ
                     AEKDIADLGALYSQNFQLKYKNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATN
                     TLIVTDTRSVIEKFRKLIDELDVPAQQVMIEARIVEAADGFSRDLGVKFGATGRKKLK
                     NETSAFGWGVNSGFGGGDKWEAQTKINLPVAAAANSISLVRAISSGALNLELSASESL
                     SKTKTLANPRVLTQNRKEAKIESGYEIPFTVTTASGGGNSTNTELKKAVLGLTVTPNI
                     TPDGQIIMTVKINKDSPAQCASGSNTILCISTKSLNTQAMVENGGTLIVGGIYEENNG
                     NTLTKVPLLGDIPVIGNLFKTRGKKTDRRELLIFITPRIIDTAGNSLRY"
     gene            6496..7008
                     /locus_tag="ACFJCW_000542"
     CDS             6496..7008
                     /locus_tag="ACFJCW_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HFC4150770.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLIVLPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            7088..8167
                     /gene="aroB"
                     /locus_tag="ACFJCW_000543"
     CDS             7088..8167
                     /gene="aroB"
                     /locus_tag="ACFJCW_000543"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HFC4150771.1"
                     /translation="MKTLTVHTPSHSYPIFVGNGLLPQAGSLLKPHLGKRAAIITNET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFIQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPARELSAGMAEVIKYGALGDIGFFEWLEQHMPELMTLERAPLTQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAVEAEMGYGVWLHGEAVAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLAHMSHDKKVSGGIMRFIGL
                     NRLGEAVITEITDTDILRRTLQPYL"
     gene            8906..9748
                     /locus_tag="ACFJCW_000544"
     CDS             8906..9748
                     /locus_tag="ACFJCW_000544"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HFC4150772.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLVDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGISLFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     DDRVAVISTLPLTRDESWSQLAVNELVMFREGNIVRHDRPENPVYMSAEEGLEIARAA
                     GVSV"
     gene            9777..10241
                     /locus_tag="ACFJCW_000545"
     CDS             9777..10241
                     /locus_tag="ACFJCW_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HFC4150773.1"
                     /translation="MKCPFCSHPDTRVADSRLMEERNTVRRRRHCPGCGKRFGTLETV
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     ISSSELVEIVLEELFGQNTEAAVRFAALHKRFDSPEHFASWLAQAVKTGGKT"
     gene            10273..11382
                     /gene="ribD"
                     /locus_tag="ACFJCW_000546"
     CDS             10273..11382
                     /gene="ribD"
                     /locus_tag="ACFJCW_000546"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HFC4150774.1"
                     /translation="MFSDTNISMMENALRLAALGRFSTSPNPRVGCVIAHGRQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAKGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPPVAGKGLVLLKAAGIKTECGLLENKARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEEARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPPNSHLVTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETADGK
                     IDLHHLMRLLADEGFGEIMVEAGSELTSAFLAENLADEIVLYRSPKILGGGKDLFSLP
                     ENRAALSAPPLWTPVSSEILGHDIKTVFRKNGNAF"
     gene            11577..12998
                     /locus_tag="ACFJCW_000547"
     CDS             11577..12998
                     /locus_tag="ACFJCW_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HFC4150775.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDTLFKTLFLPPLLFSAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLPLT
                     VGLLHFPANTAVLTTVYALANLAAAAFLLFQNRCRLKAVRRAPFSPAVLHRGLRYGIP
                     LALSSLAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLLQSIFSTVWTPYIFR
                     AIEENATPARLSATAESAAALLASALCLTGIFSPLASLLLPENYAAVRFTVVSCMLPP
                     LFYTLTEISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGTRGAAVACAASFW
                     LFFVFKTESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAAYLAG
                     CILRHRKNLHKLFHYLKKQGFPL"
     gene            12995..14061
                     /locus_tag="ACFJCW_000548"
                     /pseudo
     CDS             12995..14061
                     /locus_tag="ACFJCW_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
     gene            14075..15247
                     /locus_tag="ACFJCW_000549"
     CDS             14075..15247
                     /locus_tag="ACFJCW_000549"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC4150776.1"
                     /translation="MNITIAAPYCSLPSEPHFNRFWYLAELLSQSHDVLLITSNFKHY
                     DKSFRRPEDAKAASQGRLKVILLEESGYSKNVSLGRVTSHHRFVKHFEKWLENCRPGE
                     QDVIYSAYPLIATNLLLGKHKARLGYKLIVDVQDVWPESFSSVVPFLKKVPHKLLPFA
                     SRANRAYRYADALVAVSQTYLDRAKETNPNVPGEVIYIGADFPKLDAAPAKDFGDDKT
                     RFFYLGTLSYSYDVETVCKGVRKLLDDGENVELHIMGGGPDLDRLKQYACDGIKFYGY
                     IPYAEMMSVAKGCDIAVNAIHSYAMQSITNKLSDYMALQKPILNSQVNDEVAEVLTLL
                     PHANYRSGDVDGFVRAAKDILKRKNDPVQSEEIVRRFRRDISYRKIVNLIERLADE"
     gene            15240..16481
                     /locus_tag="ACFJCW_000550"
     CDS             15240..16481
                     /locus_tag="ACFJCW_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NeuD/PglB/VioB family sugar acetyltransferase"
                     /protein_id="HFC4150777.1"
                     /translation="MNKFFKRLIDIVASASGLIALSPVFLVLIYLIRKNLGSPVFFIR
                     ERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTPFGKKLRTASLDELPELWNVLK
                     GEMSLVGPRPLLMQYLPLYNKFQNRRHEMKPGITGWAQVNGRNALSWDEKFSCDVWYT
                     DNFSFWLDMKILFLTVKKVLIKEGISAQGEATMPPFAGNRKLAVIGAGGHGKVVAELA
                     AALGTYGEIVFLDDRTQGSVNGFPVIGTTLLLENSLSPEQFDITVAVGNNRIRRQITE
                     KAAALGFKLPVLIHPDATVSPSAIIGQGSVVMAKAVVQAGSVLKDGVIVNTAATVDHD
                     CLLDAFVHISPGAHLSGNTRIGEESRIGTGACSRQQTTVGSGVTAGAGAVIVCDIPDG
                     MTVAGNPAKPLTGKNPKTGTA"
     gene            16612..17787
                     /locus_tag="ACFJCW_000551"
     CDS             16612..17787
                     /locus_tag="ACFJCW_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HFC4150778.1"
                     /translation="MLNTALSPWPSFTREEADAVSKVLLSNKVNYWTGSECREFEKEF
                     AAFAGTRYAVALSNGTLALDAALKAIGIGAGDDVIVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAVIVVHLAGMPAEMDGIMALAKEHDLWVIEDCAQA
                     HGATYKGKSVGSIGHVGAWSFCQDKIITTGGEGGMVTTNDKTLWEKMWAYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAVIGRIQLKHLPEWTARRQENAAKLAESLR
                     KFKSIRLIEVAGYIGHAQYKFYAFVKPEHLKDDWTRDRIVSELNARNVPCYQGGCSEV
                     YLEKAFDNTPWRPKERLKNAVELGGTALTFLVHPTLTDDEIAFCKKHIEAVLTEAAR"
     gene            17835..19745
                     /locus_tag="ACFJCW_000552"
     CDS             17835..19745
                     /locus_tag="ACFJCW_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HFC4150779.1"
                     /translation="MNLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSDEW
                     FDFANWQSFLLTALLTITLFIRMGLYRAVTRFVSFHVLTTAFAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSDHQKKTHDPVIIYGAGRSGRQLLEA
                     VKQMREYSAAAFVDDNPKLWHTVIYDLAVYQPDAIAFLIERYGVEKILLAIPSATQEQ
                     RRRIISKLKAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVAPDDRLMNAD
                     TEGKTVMVTGAGGSIGSELCRQIIRRRPERLLLFELSEFALYTVEKELCEYCARNGIA
                     AEILPFLGSVQNRTLLTHIMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPANTMGAGKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPITLTHPDITRYFMTIPEAAQLVIQAGAMGRGGDVFVL
                     DMGESVRITDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADETMLPWHELSALLDRIRTACDRYDQQAIRDLLVNAPTGFTPTGGICDL
                     LWVCETHRKNAV"
     gene            19801..21092
                     /locus_tag="ACFJCW_000553"
                     /pseudo
     CDS             19801..21092
                     /locus_tag="ACFJCW_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
     gene            complement(21144..21980)
                     /locus_tag="ACFJCW_000554"
     CDS             complement(21144..21980)
                     /locus_tag="ACFJCW_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HFC4150780.1"
                     /translation="MIDLHCHSTVSDGMLPPAEVVRLAHQNGCTLLALTDHDHTGGIS
                     EARAEADRLGLRLINGVEISVTWRGRTIHVVGLDFDEQDENLQNLLADVRKGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIKNGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLADCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLADRFGLLASAGSDFHRLDDFSGGILGACPDLPENCKPVRAHFS
                     RH"
     gene            complement(22275..22478)
                     /locus_tag="ACFJCW_000555"
     CDS             complement(22275..22478)
                     /locus_tag="ACFJCW_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HFC4150781.1"
                     /translation="MDTTLKHKAEALLGEPLLDEPVRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRKKLKEAGWSDDAV"
     gene            complement(22456..22689)
                     /locus_tag="ACFJCW_000556"
     CDS             complement(22456..22689)
                     /locus_tag="ACFJCW_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HFC4150782.1"
                     /translation="MEATVYLEDNEYIALCDLLKLAGLAESGGQAKAFIAEGLVLRNG
                     GTEIRKTAKIRGGEVIEFDGARLEIADGYDPEA"
     gene            complement(22701..22937)
                     /locus_tag="ACFJCW_000557"
     CDS             complement(22701..22937)
                     /locus_tag="ACFJCW_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150783.1"
                     /translation="MPIAGVSGSPRLRMCISVNADSSGNRICSLPLGRISLDGWRHTG
                     FQTAFLRNRQCGHIAGFAAILGAAAAGATITPSF"
     gene            23222..26656
                     /gene="dnaE"
                     /locus_tag="ACFJCW_000558"
     CDS             23222..26656
                     /gene="dnaE"
                     /locus_tag="ACFJCW_000558"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HFC4150784.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPVGAADVWIGNPNAPDKPFRAMLVIRNDAGYLRLSELLT
                     EAYVGQDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDTFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMNRDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPSQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSLDDCLIKLSNEGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVREKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLSLDDAMKAQPQIQELLEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTAGDIVDVGKIPLDDQTAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPNMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPTKLGR
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDSSGQAEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRIMANQVMTLQTARERYARSLSLALAPHHDIGGLVRLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            26698..26952
                     /locus_tag="ACFJCW_000559"
                     /pseudo
     CDS             26698..26952
                     /locus_tag="ACFJCW_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(27308..28238)
                     /locus_tag="ACFJCW_000560"
                     /pseudo
     CDS             complement(27308..28238)
                     /locus_tag="ACFJCW_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            complement(28308..28851)
                     /locus_tag="ACFJCW_000561"
                     /pseudo
     CDS             complement(28308..28851)
                     /locus_tag="ACFJCW_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            complement(28797..29012)
                     /locus_tag="ACFJCW_000562"
     CDS             complement(28797..29012)
                     /locus_tag="ACFJCW_000562"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150785.1"
                     /translation="MSVFRINMTAATVLAALSSPVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSLKAAIWMTASIPASPPAA"
     gene            29172..29312
                     /locus_tag="ACFJCW_000563"
     CDS             29172..29312
                     /locus_tag="ACFJCW_000563"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase-like protein"
                     /protein_id="HFC4150786.1"
                     /translation="MTPPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERAS
                     AA"
     gene            29267..29833
                     /locus_tag="ACFJCW_000564"
     CDS             29267..29833
                     /locus_tag="ACFJCW_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HFC4150787.1"
                     /translation="MRFSAARSGARVRSLIGYSLPEIIRALLEMPSEAAVADIARTYS
                     AHYLNPNNRNMTLFPDAPPCLDKLKAQGFRLAVATGKGRAGLDNAISQTATGGYWLAT
                     ACAGEYPSKPSPEMVFGLCGELGLDPKEALVVGDTAHDLHMAANAGAAAVGVATGAHS
                     REQLLGAPHLAVLDGLSELPGFLARHYA"
BASE COUNT         7156 a         9007 c         7578 g         6137 t
ORIGIN      
        1 acggtttcaa tgtgcaaaga acaaggaatc cattacggat accgaaacgg ttactcactg
       61 tacaaataaa gcaggaactt tcatcatgcg cttgtttaaa agcttgaaaa accctaaaaa
      121 aacagatgcc aagctcccta aaaaatcttc gggactcaat aaccgcgcgg caatcggcat
      181 cgatatcgac cagcattcca tcaaaatggt acaattgtca ggacgtagtt taaaccaaat
      241 tcaattggaa aaatacgtca ttgccaaatt accaaagaat atcattcaag gcaataaagt
      301 ccaaaattac gatcaacttg ttacatattt gcaacaagcc tatgccaaac tgggtacttc
      361 gtgcaaaaac atcgtcgcgt ccgtcccgca aaatctggca accatcgaac aattgaccta
      421 cacggccaaa gatgcagaat tggacctgca ggggttcgtg gagtcctcca tctccgaagc
      481 cagctcgata tcgctcgaag aagccaatta cgactatcag gtcttgtccc aatcggccgt
      541 cggcgaagct gttttgtccg tcgcatcgag aaaggatgaa atcgaacccc tgattgacgc
      601 attcaacgca gccggtatga aattatccgc gcttgatgtg gacattttcg gacaatacaa
      661 cgcctacgcg ctgtggataa accattttgc ccccgagctt gcggacgaaa aagtggccat
      721 tttcggcgta tatgccgcac agacctacgc cctggtcatc caagacggaa aaatcctata
      781 caaacaggaa acctccgtca gcgcagaaca gctcaaccaa ctcatccagc gcacctatca
      841 ggtaacagca gaaaaagcgg aagagatcat caactccccg caaaaacctt ccgattacca
      901 agaaagcgtg gcaaactatt tcaaccagca gattacccaa gaaatacaaa gggtcttgca
      961 gttttattac accacgcaga ccgcagacga tatgaccgac atcaagcata tcctgctgac
     1021 gggggaagcg gtgcgccaga aaggcatcgc ccaaaccgtc gcctcgcaaa ccaatgcgga
     1081 tgtacaatgc gtccatcccg cgcgttattt tgcgaacgac ctcaaaacag acgaacaaca
     1141 attcgaactt gatgcgccga cactgaccaa ggcgttcggt ttggcggtac ggggattata
     1201 attatgaaca atttaatcaa aatcaacctc ctcccctaca gggaagagat gaacaaacgc
     1261 aaacagcagc agtttaaaac gctgatgtac ggcgccgtgc tgacgggcgt tgccgccgtt
     1321 gcggcaacct acctgtttat cgacaatatg atcaataaac agtcggaaaa aaacacgctg
     1381 ctggaaatct ccatcgcaca cttggatacc gagctgtcgg aaatacaaaa gctcaaacag
     1441 gaaaaagatg ccttcctgat taagaaaaac aaaatcgggg agctccagat caaacgcctc
     1501 caagccgcaa aaatcctcga cagcctgaat gaggccgtcc ccggaagcac ctacctaacc
     1561 tcgctggatg ccgttaccgc cgactcttat cggctcagcg gcaggacatc cagcgacaac
     1621 cgcgttgccg ccatgatgag ggcgatgccc aataccggca tattcaagca acccgaattg
     1681 ttaagcatca agaaaaacaa ttcgcatcaa gaatttaccc ttcaggcaac attacaacct
     1741 atcgtaaagg cggccgaatc caaagagaat ccggcttcgg gaaacgcaca ggaggcaaac
     1801 tgaatggctt ctaaatcatc taaaaccaac ttggatctca acaaccttca cctgctcaac
     1861 cttcctgcca ggctttttat cgccctgctg gtcgttgccg ccgtgctggg gctcggttat
     1921 gccggattgt tcaaaagcca gatggaatcc cttgaggaat atgaagcaaa agaaaccgaa
     1981 ctgaaaaaca cctacaaaca gaaaagtatc gacgcggcca gcctgaacaa ccttagggac
     2041 gaacttgcct caatccgctc tgccttcgat atcatgttga aacagctgcc gacagatgca
     2101 gaaattccca atttggttca agagcttcat caggcgggtt cgagcaacgg tctgcgcttg
     2161 gacagcgtta tgccccaacc tcccgtagat gacggtccca tcaaaaaatt accctattcc
     2221 atttccatta ccggaaatta cgaacagatc agccaattta cccgcgatgt cggcagtctc
     2281 tcccgaatca ttacccttga gtcgctgaaa atcgcccaat ctccggaaaa cggcggcaat
     2341 cctgacggca agagcagtat cctgaacctc agcgccattg ccaccaccta ccaagcaaaa
     2401 tccgtagaag agcttgccgc agaagcggca caaaatgccg agcaaaaata acttacgtta
     2461 gggaaaccat gaaacactat gccttactca tcagctttct ggctctctcc gcgtgttccc
     2521 aaagttctga agacctaaac gaatggatgg cacaaacgcg acgcgaagcc aaagcagaaa
     2581 tcataccttt ccaagcacct accctgccgg ttgcgccggt atacagcccg ccgcagctta
     2641 cagggccgaa cgcattcgac ttccgccgca tggaaaccgc caaaaaaggg gaaaatgccc
     2701 ccgacaccaa gcgtattaaa gaaacgctgg aaaaattcag tttggaaaat atgcgttatg
     2761 tcggcatttt gaagtccgga cagaaagtct ccggcttcat cgaggctgaa ggttatgtct
     2821 acactgtcgg tgtcggcaac tatttgggac aaaactacgg tagaatcgaa agcattaccg
     2881 acgacagcat catcctgaac gagctgatag aagacagcac gggcaactgg gtttcccgta
     2941 aagcagaact gctgttgaat tcttccgaca aaaacaccga acaagcggca gcacctgccg
     3001 cagaacaaaa ttaagaagag gattactcca ttatgaatac caaactgaca aaaatcattt
     3061 ccggtctctt tgtcgcaacc gccgcctttc agacggcatc ggcaggaaac attacagaca
     3121 tcaaagtttc ctccctgccc aacaaacaga aaatcgtcaa agtcagcttt gacaaagaga
     3181 ttgtcaaccc gaccggcttc gtaacctcct caccggcccg catcgccttg gactttgaac
     3241 aaaccggcat ttccatggat caacaggtac tcgaatatgc cgatcctctg ttgagcaaaa
     3301 tcagtgccgc acaaaacagc agccgtgcgc gtctggttct gaatttgaac aaaccgggcc
     3361 aatacaatac cgaagtacgc gggaacaaag tttggatatt cattaacgaa tcggacgata
     3421 ccgtgtccgc ccccgcccgc ccagccgtaa aagccgcgcc tgccgcaccg gcaaaacaac
     3481 aggctgccgc accgtttacc gagtccgtag tatccgtatc cgcaccgttc agcccggcaa
     3541 aacaacaggc agcggcatcg gcaaaacaac aggcggcgac accggcaaaa caaaccaata
     3601 tcgatttccg caaagacggc aaaaatgccg gcattatcga attggcggca ttgggctttg
     3661 ccgggcagcc cgacatcagc caacagcacg accacatcat cgttacgctg aaaaaccata
     3721 ccctgccgac cgcgctccaa cgcagtttgg atgtggcaga cttcaaaaca ccggttcaaa
     3781 aggttacgct gaaacgcctc aataacgaca cccagctgat tatcacaaca accggcaact
     3841 gggaactcgt caacaaatcc gccgcgcccg gatactttac cttccaagtc ctgccgaaaa
     3901 aacaaaacct cgagtcaggc ggcgtgaaca atgcgcccaa aaccttcaca ggccggaaaa
     3961 tctcccttga cttccaagat gtcgaaatcc gcaccatcct gcagattttg gcaaaagaat
     4021 ccgggatgaa cattgttgcc agcgactccg tcaacggcaa aatgaccctc tccctcaaag
     4081 atgtgccttg ggatcaggct ttggatttgg ttatgcaggc gcgcaacctc gatatgcgcc
     4141 agcaagggaa catcgtcaac atcgcgcccc gcgacgagct gcttgccaaa gacaaagcct
     4201 tcttacaagc ggaaaaagac attgccgatc tgggcgcgct gtattcccaa aacttccaat
     4261 tgaaatacaa aaatgtggaa gaattccgca gcatcctgcg tttggacaat gccgacacga
     4321 ccggaaaccg caacacgctt gtcagcggca ggggcagcgt gctgatcgat cccgccacca
     4381 acaccctgat tgttaccgat acccgcagcg tcatcgaaaa attccgcaaa ctgattgacg
     4441 aattggacgt acccgcgcaa caagtgatga ttgaggcgcg tatcgtcgaa gcggcagacg
     4501 gcttctcgcg cgatttgggc gttaagttcg gcgcgacagg caggaaaaaa ctgaaaaatg
     4561 agacgagcgc attcggctgg ggcgtgaact ccggcttcgg gggcggcgat aaatgggagg
     4621 cccaaaccaa aatcaacctg ccggttgccg ctgccgcaaa cagcatttcg ctggtgcgcg
     4681 cgatttcctc cggcgcgttg aatttggaat tgtccgcatc cgagtcgctt tcaaaaacca
     4741 aaacgcttgc caatccgcgc gtgctgaccc aaaaccgcaa agaggccaaa atcgaatccg
     4801 gttacgaaat tccttttacc gtaactacag cctcgggcgg cggcaactct accaacacgg
     4861 aactcaaaaa agccgtcttg gggctgaccg ttacgccgaa catcacgccc gacggacaaa
     4921 tcatcatgac cgtcaaaatc aacaaagact cgcctgcaca atgtgcttca ggcagcaaca
     4981 caatcctatg tatttcgacc aaaagcctga atacgcaggc tatggttgaa aacggcggca
     5041 ctttgattgt cggcggtatt tatgaagaaa acaacggcaa tacgctgacc aaagtccccc
     5101 tgttgggcga catccccgtt atcggcaacc tctttaaaac acgcgggaaa aaaaccgacc
     5161 gccgcgaact gctgattttc attaccccga ggattataga tacggccggc aacagcctgc
     5221 gctattgatg cgtcaaaata agggcatatg ttttacagca tatgcccttt ctttatgctt
     5281 tttgccgcga ccgaaatgcc gtcattcccg cgcaggcggg aatccaactt gtccggtttc
     5341 ggttgttttt cgtctcgtaa cttttgagcc gtcattcccg cgaaatcgga aatccagtcc
     5401 gttcagtttc ggtcatttcc gataaattcc tgttgctttt catttctaga ttcccacttt
     5461 cgtgggaata acggcggaag ggataaatcc tcgcaatcca aagcctcgtc atttccacaa
     5521 aaaacagcaa cccgaaacac cccgtcattc ccgagcaggc gggaatctag gtctttaaac
     5581 ttcggttttt ttccgataaa ttcttgcctc attgaaattc tagattcccg ctttcgcggg
     5641 aatgacggga tatgggtttc cgtgcggacg tgttcggatt tccgcctgcg cgggaatgac
     5701 gattcgggta ttactgacga ttcatcgggc cgtagggtgg gcttcagccc accaatttca
     5761 ccgcatcaag ggttttgggg aataggcgta actcggcggt ttcggttttt ggcgaagttg
     5821 gttggaatcg gcgggctgaa gcacacccta cagtccaccc tacaacccat cttacgcatc
     5881 cgccttacgc atttatcctt cgcctgccga tatgccgtca ttcccgcaca ggcgggaatc
     5941 tagaaccgca acgcggcagg aatctgtcgg atacggctga aaccgaacgg actggattcc
     6001 cgcctgcgcg ggaatgacgg ctgcagatgc ccgacggtct ttatagcgga ttaacaaaaa
     6061 tcaggacaag gcggcgaagc cgcagacagt acggatagta cggaaccggt tcgcccggtg
     6121 cttgggcgcc ttagggaatc gttccctttg agctaaggcg gggcaacgcc gtaccggttt
     6181 ttgttcatcc gctatagtat tgataaacat attatcttca atatattcaa ttggataatt
     6241 gtttacctaa gcaaagataa ttgccttttc ctgacaaatt aagtgaaatc aacggattgt
     6301 caaaacacag cctgaaataa aaaacctccc tgatttcttt tatttttcct taaaatcaga
     6361 aaagttcggg atggtcgggt tatttttcca aacgtaccgc cgccctgccg atttcgtata
     6421 aaatcccgcc gtaacccgac aagcccgaac cctgccgccc cgaaaggcgg gggggtcaaa
     6481 cattaaggaa ccgtgatgaa aaactttaac ggcaaactca tcctcatcgg actgatgggc
     6541 gcgggcaaaa ctacgctggg ccggcaaatg gcgcagcggc tggattaccg tttttacgac
     6601 agcgatcacg aaatcgccgc agcggcgggc gttcccatcc ccaccatatt tgaaatggaa
     6661 ggcgaacagg gattccgttc gcgcgaaacc gccatactca aaaaactgat tgtcctgccg
     6721 catatcgtcc tgtccaccgg cggcggcgcg gtgttaaaag aagaaaaccg cgcccttatc
     6781 cgcaaaagcg gcacggtcgt ttatctgcac gccccgcccg aaaccctgct cgaacgcacg
     6841 cgctgcgaca acagccgccc tttgctgcaa gttgccgatc ctttggcgaa attgcgcgaa
     6901 ctctacgccg cacgcgaccc cgtttaccgc caaaccgccg actttaccgt agaatcggca
     6961 aactgccggg aaaccgtgca aaccctgctc aaacgcttat cccgataaac cggcatatgc
     7021 gccgctcccc gaaaaccaaa ccgcaccccg cccggcgggc cggcggttca aactttaagg
     7081 aacaacaatg aaaacactga ccgtacacac gccttcgcac agctacccca tctttgtcgg
     7141 caacgggctg ctgccgcagg cgggaagcct gctcaaaccg catttgggca aacgcgccgc
     7201 catcatcacc aacgaaaccg tcgccccgct ctacctcggc acgcttcaga cggcattgga
     7261 tgcggcaggc gtatcccatt tcagcatcat cctgcccgac ggcgaggcgc acaaaaactg
     7321 gcagacgctc aacctcatct ttgacgggct gatgcaaaac cgcgccgaac gtaaaaccac
     7381 gctgattgcg ctgggcggcg gcgtgatcgg cgacatggtc ggctttgccg ccgccaccta
     7441 ccagcgcggc gcgccgttca tccaaatacc gaccacgctg ttgagtcagg tcgactcatc
     7501 ggtgggcgga aaaaccgcca tcaaccaccc gctcggcaaa aatatgatcg gcgcgtttta
     7561 ccagccgcag gcggtgcttg cagatttgga cacgctgcac accctgcccg cccgcgaact
     7621 gtccgccggt atggcggaag tcatcaaata cggcgcgctc ggcgacatcg gcttttttga
     7681 atggctggaa cagcatatgc ccgaactgat gacactcgaa cgcgcgcccc tcacccaagc
     7741 cgtgtaccgc tgctgccaaa tgaaggcaga catcgtcgcc caagacgaaa ccgaacaggg
     7801 catacgcgca tggctcaacc tcggacacac cttcggacac gccgtcgaag cggaaatggg
     7861 ttacggcgta tggctgcacg gcgaggccgt tgccgccggc tgcgtgttgg cggcgcgttt
     7921 gtccgaacaa ctgggcaaaa cctccgccgc agataccgcg cggctcgccg ccctgctcga
     7981 agccgccgga ctgccgtccg caccgcccgt gtttgccttt gaaaaatggc tggcacatat
     8041 gagccacgac aaaaaagtca gcggcggcat catgcgcttt atcggtctga accggctggg
     8101 cgaagccgtc atcaccgaaa ttaccgacac ggacatcctc cggcgcaccc tgcaaccgta
     8161 tctctgattt cctctgccga tgtgttgccg cgcgggtttg acgcacgatg atgactttcc
     8221 atcatcattc tccgcgaaag cgggcatccg gttattccat attgcaggga tttatccgga
     8281 ataacgacaa cctgtccgcc gtcatttccg cgcagatgga aatttggaaa ttcaaaatca
     8341 caggaattta tccggaatat agcggattaa caaaaatcag gacaaggcgg cgaagccgca
     8401 gacagtacaa atggtacgga accggttcgc ccggtgcttg ggcgccttag ggaatcgttc
     8461 cctttgagcc ggggcggggc aacgccgtac cggtttttgt taatccgcaa cagcaaccct
     8521 gtcgccgtca ttaccgcgaa agcgggaatc cagtccgttc agtttcggtc atttccgata
     8581 aattcctgtt gcttttcatt tctagattcc cactttcgtg ggaatgacgg cggaagggtt
     8641 ttggtttttt ccgataaatt cttgaggcat tgaaattcca gattcccgcc tgcgcgggaa
     8701 tgacggctca aaagttacgg aacgaaaaac aaccgaaacc ggacaagtcg gattcccgcc
     8761 tgcgcgggaa tgacggaatc ttaagtttcc gtctttgttt tctgttttcg cgggaataat
     8821 ggggaacaag ccgtatttca gacggcattt tcagttcggg gtataatccg aatacttgcg
     8881 accatctgaa tcatttggac aaactatgtg tcaactgctg ggcatgaact gcaatacgcc
     8941 gaccgatatt atgttttcct ttgaaggctt ccgccgcagg ggcggcatta ccgaccatca
     9001 cgccgacggt ttcggcatcg gctttttcga aggcaaaggc gtgcgcctgt tccatgacga
     9061 caagccgagt gcaaattccc ccgtcgccga cctcgtgcgc gcctaccaga ttaaatcgga
     9121 aaacgtcgtc gcccacatcc gcaaagcctc gcaaggtcaa acctcgctgg cgaacaccca
     9181 tccctttatg cgcgaaatgt ggggcggcta ctggctgttt gcccacaacg ggcatttggt
     9241 cgattttttc cccgaacagg gagaattttt ccaccccgtc ggcacaaccg attccgaacg
     9301 cgcgttctgc cacatcctca accgcctgcg cacccgcttt gccgcccgtc ccgacgacga
     9361 cacgctgttt gacgcgattg cggggctgac gcacgaaatc cgcaagttcg ggctgtttaa
     9421 cttcatgctt tcagacggca tttccctgtt tgcccacgcc agcacgctgc tgcactacat
     9481 cgtccgccaa gccccgttcg gcaaagcgcg cctgctcgac gacgatgtaa tggtcgattt
     9541 tgccgaagta accacgccgg acgaccgcgt cgccgttatc tccaccctgc cgctgactcg
     9601 cgatgaatcg tggtcccaac ttgccgtgaa cgaactggtc atgttccgcg aaggcaacat
     9661 cgtccggcac gaccgtcccg aaaatcccgt ctatatgagt gccgaagaag gcctggaaat
     9721 cgcccgcgcc gccggcgtat cggtttgacg ttcagacggc atcaggaaga aacaccatga
     9781 aatgcccgtt ttgcagccac ccagacaccc gagttgccga ttcccgcctg atggaagagc
     9841 gcaataccgt ccgccgccgc cgccactgcc ccggctgcgg caaacgcttc ggcacgctcg
     9901 aaaccgtcga actcaaaatg cccgccgtca tcggtccgga caagaaacgt tcgcccttca
     9961 atgcacaacg cctccgcaac gacctgaccg ccgccgcccg aaaatccgcc ctgacacccg
    10021 aacagattga cgaaaccgtc cgcctgacgg aacacaggct ctacacttcg ggtcagcgcg
    10081 acatatcctc atccgaactt gtcgaaatcg tgctggagga gctgttcggg caaaacacgg
    10141 aagccgccgt ccgtttcgcc gccctgcaca aacgcttcga cagcccggaa catttcgcct
    10201 cgtggctggc gcaagccgtc aaaacaggcg gcaaaacctg attcccccaa cccatactga
    10261 tacggtatcc ctatgttttc ggacacaaat atatccatga tggaaaacgc cctccgactt
    10321 gccgctttgg ggcgtttttc cacttcaccc aacccgcgcg tcggctgcgt tatcgcacac
    10381 ggcagacaaa ttgtcggaca gggcttccac gtcaaagcgg gcgaacccca tgccgaagtc
    10441 cacgccctgc gtcaggcggg ggaaatggca aaaggcgcga ccgcctttgt taccctcgaa
    10501 ccgtgcagcc attacggacg cacaccgccc tgcgccgaag ccctgctccg ttccggcgta
    10561 acacgcgtcg tcgccgccat gcgcgacccc aacccgccgg ttgcaggcaa agggcttgtc
    10621 ctgctcaaag cagcgggcat caagacggaa tgcggactac ttgaaaacaa agcacgcgaa
    10681 ctcaaccggg gatttttatc gcgcatcgaa cgccgccgcc cctttgtccg cctcaaatgc
    10741 gccgtttcgc tggacggcaa aaccgccctt tcagacggca gcagcttttg gattaccggc
    10801 gaggaagcgc gtgccgacgt acaggttttg cgtgccgaaa gctgcgcggt gctgaccggc
    10861 atcggcacgg tgttggcaga caatccccgg ctcaacgtcc gcgcttttcc aactttgcgc
    10921 caacccgcac gcatcgtttt agacagccgc ctgcgcctgc ccccgaacag ccatttggtt
    10981 accgacggac aatctccgac ctacatcgcc accttggaac gcgatgaaga caaactccgc
    11041 ccctatcggg aacacgcaca catccgcatc ctgatgccgt ctgaaacggc agacggcaaa
    11101 atcgacctgc accatctgat gcgcctcctt gccgacgaag gtttcggcga aatcatggtc
    11161 gaagcaggct ccgaactcac atccgcattt ttggcggaaa atttggcgga cgaaatcgtg
    11221 ctgtaccgtt cgcccaaaat cctcggcggc ggcaaagacc tgttttccct gcccgaaaac
    11281 cgtgccgccc tttccgcacc gcccttgtgg acacccgttt caagcgaaat cctcggacac
    11341 gacatcaaaa ccgtgttccg gaaaaacggc aacgcctttt aaagggtttg ccgccgtttt
    11401 gctatataat aacgccgata aaaaacggcc cgttcagacc gccgcccgcc cggaaaagcg
    11461 caacccggac tgccgcaccc cgccggcagc cgcgacggcc tgaaagccgt caaattccga
    11521 tcaagaaagg cttcagacag cacaggcagc atcacgccgc cgcccggaca tcaaaaatgg
    11581 acacaaaaga aatcctcggc tacgcggcag gctcgatcgg cagcgcggtt ttagccgtca
    11641 tcatcctgcc gctgctgtcg tggtatttcc ccgccgacga catcgggcgc atcgtgctga
    11701 tgcagacggc ggcgggactg acggtgtcgg tattgtgcct cgggctggat caggcatacg
    11761 tccgcgaata ctatgccgcc gccgacaaag acactttgtt caaaaccctg ttcctgccgc
    11821 cgctgctgtt ttccgccgcg atagccgccc tgctgctttc ccgcccgtcc ctgccgtctg
    11881 aaatcctgtt ttcgctcgac gatgccgccg ccggcatcgg gctggtgctg tttgaactga
    11941 gcttcctgcc catccgcttt ctcttactgg ttttgcgtat ggaagggcgc gcccttgcct
    12001 tttcgtccgc gcaactcgtg cccaaactcg ccattctgct gctgttgccg ctgacggtcg
    12061 ggctgctgca ctttccggcg aacaccgccg tcctgaccac cgtttacgcg ctggcaaacc
    12121 ttgccgccgc cgcctttttg ctgtttcaaa accgatgccg tctgaaggcc gtccggcgcg
    12181 cgccgttttc gcccgccgtc ctgcaccggg ggctgcgcta cggcataccg ctcgcactga
    12241 gcagccttgc ctattggggg ctggcatccg ccgaccgttt gttcctgaaa aaatatgcgg
    12301 gcctggaaca gctcggcgtt tattcgatgg gtatttcgtt cggcggggcg gcattattgc
    12361 tccaaagcat cttttcaacg gtctggacac cgtatatttt ccgtgcaatc gaagaaaacg
    12421 ccacgcccgc ccgcctctcg gcaacggcag aatccgccgc cgccctgctt gcctccgccc
    12481 tctgcctgac cggaattttc tcgcccctcg cctccctcct actgccggaa aactacgccg
    12541 ccgtccggtt taccgtcgta tcgtgcatgt tgccgccgct gttttacacg ctgaccgaaa
    12601 tcagcggcat cggtttgaac gtcgtccgca aaacgcgtcc gatcgcgctt gccaccttgg
    12661 gcgcgctggc ggcaaacctg ctgctgctgg ggcttgccgt accgtccggc ggcacgcgcg
    12721 gcgcggcggt tgcctgtgcc gcctcattct ggttgttttt tgttttcaag acagaaagct
    12781 cctgccgcct gtggcagccg ctcaaacgcc tgccgcttta tatgcacaca ttgttctgcc
    12841 tggcctcctc ggcggcttac acctgcttcg gcacgccggc aaactacccc ctgtttgccg
    12901 gcgtatgggc ggcatatctg gcaggctgca tcctgcgcca ccggaaaaat ttgcacaaac
    12961 tgtttcatta tttgaaaaaa caaggtttcc cattatgaaa atcatcctga ctacttctat
    13021 gtcgggtctg ggcggcacag aaaccgccac cgtccgcctc gggcggctgc tcaaacggca
    13081 cgggcacgac atcatcctcg cctcctcgga cggccctttt gtcggagagg cgcaagcatc
    13141 gggcatccgt tggcagccgg ttgattttta ccgggacggg cttgccggct accttaaaag
    13201 cacctttgcc tacgcccgga tgctgcgccg cgaacaaccc gacatcatcg actgccaaat
    13261 ggcgcgcgcc gtcccggcct gcgcccttgc cgccaaaatc gtttcaccga aaaccaaaat
    13321 catctgccac tcgcacggtt tggacgcggc aacctacccc aaaaccgcca aactcttcga
    13381 caagctgggc gcgtacatca tcggcaactg caaacacgaa cgcgaaaagc tcatccgcca
    13441 cggcttcccc gccggccgga ttgcctacgc ctacaacacc cccccccgga atttcatttc
    13501 cggaaaaccg aaaaagaatg cgccgtactc ggcacacttt cccgtttgga caccgtccgc
    13561 gccgtgcatc tgatgttgga tattttgaag aaaatggttg gccgcaatat acccgtacgc
    13621 ctgaacatgg cgggcatagg agaagaaatg gacaacctca aagcccaagc caaacgtttg
    13681 ggtattgaag acaaagtgac cttcctcggc ggcgtccgcg atttgaccgg ctacttcaaa
    13741 gaagtcgata ttttagtgaa cacgccgcat tgcgtaggtg accacggcgc aggtgtcggc
    13801 aacaatattt tggaagccgg cctttacgac acgcctgtcg tgacctacaa catggcgggc
    13861 atttccgaaa tggtcattac cggccaaacc ggctactgca ttcctttcgg cgatgacgaa
    13921 gcgtttatcg aagccgtcga tacactcatc aagcatccag agttgcgcag ccaaatgggc
    13981 aaagccctgc acaaacatgt cgaaacctta tgctccgacg acgaaatcta ccgcaccacc
    14041 atggctgcgt acgaaatgta aggtcgtctg aaacatgaac attaccatag ccgcccccta
    14101 ctgctcgctg ccgtccgaac cgcatttcaa ccgcttttgg tatctggcag aactattgtc
    14161 gcaatcgcac gacgtgttgc tgattaccag caacttcaag cactacgaca aatctttcag
    14221 acggcccgaa gatgctaagg ccgcctcaca aggccgtctg aaagtcatac tgttggaaga
    14281 aagcggatat agcaaaaacg tgtctttggg acgcgtgacc agccatcacc gcttcgtcaa
    14341 acattttgaa aaatggttgg aaaactgccg tccgggcgaa caagacgtca tctattccgc
    14401 ctatccgctg attgccacca acctgctgtt gggcaaacac aaagcgcgtt tgggctacaa
    14461 actgattgtc gatgtgcagg acgtatggcc ggagtctttc tcctcggtcg taccgttttt
    14521 gaaaaaagta ccgcacaagc tgctgccctt tgcttcacgc gccaaccggg cctaccgcta
    14581 cgccgacgcg ctggttgccg tatcgcagac ttatctcgac cgcgccaaag aaaccaatcc
    14641 gaacgtaccc ggcgaagtca tctatattgg tgctgacttt cccaaactcg atgccgcacc
    14701 tgccaaagat tttggcgacg acaaaacccg ctttttctac ttgggcacgc tcagttacag
    14761 ctatgacgtg gaaaccgtgt gcaaaggcgt tcggaaactt ttggacgacg gcgaaaatgt
    14821 agagctgcac atcatgggcg gcggccccga tttggacagg ctcaaacaat atgcctgcga
    14881 cggcatcaag ttttacggct acattcctta cgccgaaatg atgtcggtcg ccaagggctg
    14941 cgacattgcc gtcaacgcca tccactctta cgccatgcag tcgattacca acaaactctc
    15001 cgactatatg gctttgcaaa aaccgattct gaacagccag gtcaacgacg aagttgccga
    15061 agtccttacc ctgctgccgc atgcgaacta ccgttccggc gatgtggacg gtttcgttcg
    15121 agccgccaaa gatattttga agcgcaaaaa cgatcctgtt cagtccgaag aaatcgtccg
    15181 ccgcttcagg cgcgacattt cctatcggaa aatcgtcaac ctgattgaaa gattagctga
    15241 tgaataaatt tttcaaacgc ctcatcgaca ttgtcgcctc cgcatcgggg ctgattgccc
    15301 tgtcgcccgt gtttttggtt ttaatatacc tcatccgcaa aaacttaggt tcgcccgtct
    15361 tcttcattcg ggaacgcccc ggaaaggacg gaaaaccttt taaaatggtc aaattccgtt
    15421 ccatgcgcga cgcgcttgat tcagacggca ttccgctgcc cgacagcgag cggctcacgc
    15481 ccttcggcaa aaaactgcgc accgccagtt tggacgaact gcctgaactg tggaacgtcc
    15541 tcaaaggcga gatgagcctg gtcggccccc gcccgctttt gatgcagtat ctgccgcttt
    15601 acaacaaatt tcaaaaccgc cgccacgaaa tgaaaccggg cattaccggc tgggcgcagg
    15661 tcaacgggcg caacgcgctt tcgtgggacg aaaagttctc ctgcgatgtt tggtacaccg
    15721 acaatttcag cttttggctg gatatgaaaa tcctgtttct gacagtcaaa aaagtcttga
    15781 ttaaagaagg catttcggcg caaggggaag ccaccatgcc ccctttcgcg gggaatcgca
    15841 aactcgccgt tatcggcgcg ggcggacacg gcaaagtcgt tgccgagctt gccgccgcac
    15901 tcggcacata cggcgaaatc gtttttctgg acgaccgcac ccaaggcagc gtcaacggct
    15961 tccccgtcat cggcacgacg ctgctgcttg aaaacagttt atcgcccgaa caattcgaca
    16021 tcaccgtcgc cgtcggcaac aaccgcatcc gccgccaaat caccgaaaaa gccgccgcgc
    16081 tcggcttcaa actgcccgtt ctgattcatc ccgacgcgac cgtctcgcct tctgcaataa
    16141 tcggacaagg cagcgtcgta atggcgaaag ccgtcgtaca ggccggcagc gtattgaaag
    16201 acggcgtgat tgtgaacact gccgccaccg tcgatcacga ctgcctgctt gacgctttcg
    16261 tccacatcag cccgggcgcg cacctgtcag gcaacacgcg tatcggcgaa gaaagccgga
    16321 taggcacggg cgcgtgcagc cgccagcaga caaccgtcgg cagcggggtt accgccggtg
    16381 caggggcggt tatcgtatgc gacatcccgg acggcatgac cgtcgcgggc aacccggcaa
    16441 agccccttac gggcaaaaac cccaagaccg ggacggcata agcgattaaa ataaacttcc
    16501 gtacaaaccg attttgacaa cacctgcggc gcgcgcccga ttcttcggaa cacgccccct
    16561 tcagacggca tagggtcgga aatgccgtcc gaacccgacg gaccaaacac catgctgaac
    16621 accgcccttt ccccatggcc gagcttcacc cgagaagaag ccgatgccgt ttccaaagtc
    16681 ctgctgtcca acaaagtcaa ctactggacg ggcagcgaat gccgcgaatt tgaaaaagaa
    16741 tttgccgcct ttgccggcac gcggtacgcc gtcgcccttt ccaacggcac gcttgcgctc
    16801 gatgccgcac tcaaagcaat cggcataggc gcgggcgacg atgtgattgt tacctcgcgc
    16861 accttcctcg cctccgcctc ctgcattgtg aacgcgggcg caaaccccgt gtttgccgac
    16921 gtggatttga acagccaaaa catcagcgcg gaaaccgtca aagccgtgct gaccccgaat
    16981 accaaagccg tcattgtcgt ccaccttgcc ggtatgcctg ccgaaatgga cggcatcatg
    17041 gctttggcaa aagaacatga tttgtgggtg attgaagact gcgcccaagc gcacggcgcg
    17101 acctacaaag gcaaatccgt cggctctatc gggcacgtcg gcgcgtggtc gttctgtcaa
    17161 gacaaaatca tcaccaccgg cggcgagggc ggtatggtta cgaccaacga caaaaccctg
    17221 tgggaaaaaa tgtgggcgta caaagaccac ggcaaaagct acgatgccgt gtaccaccgc
    17281 gaacacgcgc ccggtttccg ctggctgcac gaaagtttcg gcaccaactg gcgcatgatg
    17341 gaaatgcagg ctgtcatcgg ccgcatccag ctcaaacacc tgcccgaatg gacggcgcgc
    17401 cgccaagaaa acgccgccaa gctggcagaa agtttgcgca aattcaaaag catccgcctg
    17461 attgaagtcg ccggctacat cggacacgcg caatacaagt tctacgcctt cgtcaaaccc
    17521 gaacacctga aagacgactg gacgcgcgac cgcatcgtca gcgaactgaa cgcgcgcaac
    17581 gtcccctgct atcaaggcgg ctgctccgaa gtgtatttgg aaaaagcctt cgacaacacg
    17641 ccgtggcggc ccaaagagcg gctgaaaaac gccgtcgaac tgggcggcac cgccctgacg
    17701 ttcttggtgc acccgacgct gaccgacgac gaaatcgcgt tctgcaaaaa acacatcgaa
    17761 gccgtcctga ccgaagccgc acgataaccc ttcagacggc atatgccgcc tgaaagcaca
    17821 taccgcccca cgatatgaat ctggaaaccc tgatcgccct gccgcgcaac atcaagaaaa
    17881 tctgtttcct catacacgat tttctgatga ttttcattgc cttttggttc acccaaagcc
    17941 tgaaggccga ctactcggac gaatggttcg attttgccaa ctggcagtct tttttgctga
    18001 ctgccttgct gaccatcaca ttatttatcc gaatggggct ttaccgcgcc gttacacgct
    18061 ttgtcagttt ccacgtcctg accaccgcct ttgccggcag cctcgcctcc gccgtattgt
    18121 tcttcctcaa cacattgatt tttgaagaaa ggctgcgcct cgccctgccg attgtctatt
    18181 tcttactgct gtttgtttcc gtgaccggct cgcgtatggt tttgcgcgga ctcctgtccg
    18241 accaccagaa aaaaacacat gaccccgtca tcatttacgg cgcggggcgt tcgggtcggc
    18301 agctccttga agccgtcaaa cagatgcgcg aatattccgc cgccgccttt gtggacgaca
    18361 accccaagct ttggcacacc gtcatctacg accttgccgt ttaccagccc gatgccatcg
    18421 ccttcctcat cgaacgctac ggcgtggaaa aaatcctgct cgccattccc agcgcgactc
    18481 aggaacaacg ccgccgaatc atcagcaaac tgaaagccta tccgtgcgaa gtgttgacca
    18541 ttcccggaat gaaagacctg atggacggga aaatcagcat cggcacgctc aaaaaaatct
    18601 ctgtgtccga cctgctcggg cgcgattccg tcgcacccga cgaccgcctc atgaatgccg
    18661 acaccgaagg caaaaccgtc atggtaaccg gcgcgggcgg ctccatcggt tcggaactct
    18721 gccgccagat tatccgccgc cgccccgaaa ggctgctgct gttcgagctg tccgaattcg
    18781 ccctgtacac cgttgaaaaa gaattgtgcg aatactgcgc ccgaaacggc atcgccgccg
    18841 aaatccttcc ctttttgggt tcggtgcaaa accgcacgct gctcacgcac attatgaccg
    18901 ccttttccgt tgcgaccgtc tatcacgccg ccgcctacaa acacgtccct atggtcgagt
    18961 tcaacaccgt cgagggcata cgcaacaaca tcttcggcac actcgaatgc gcgcttgccg
    19021 ccacggcttc gggcgtggaa accttcgtcc tcatctccac cgacaaagcc gtccgccccg
    19081 ccaacacgat gggtgcgggc aaacgcatgg cggaactctg ccttcaggca ctcgccgccg
    19141 aacccggaca aaaaacccgc ttcagcatgg tacgtttcgg caatgtttta ggctcgtccg
    19201 gctccgtcgt cccgctgttt gaaaaacaga ttgccgaagg cggccccatc accctgaccc
    19261 accccgacat cacgcgctat ttcatgacca tacccgaagc ggcgcaactg gttatccaag
    19321 ccggcgcgat gggcagaggc ggcgacgtgt tcgtcctcga tatgggcgaa tccgtcagaa
    19381 tcaccgacct tgcccgccaa atgattacct taagcggact caaacccaaa acgcccgaac
    19441 agcccgacgg cgacatcgaa atcctcatta ccgggctgcg ccccggcgaa aaactctacg
    19501 aagagttgct catcggcgac aacgtccgca aaaccggcca tccgcgcatc atgaccgccg
    19561 acgagaccat gctgccgtgg cacgaactct ccgccctgct cgaccgcatc cgcaccgcct
    19621 gcgaccgtta cgaccagcag gcaatccgcg acctgctcgt caacgccccg accggcttta
    19681 ccccgaccgg cggcatctgc gacctgcttt gggtatgcga aacacacaga aaaaatgccg
    19741 tctgaacctt cagacggcat accgtacaaa ccaatctgcc ttacacacac tgagtttgac
    19801 atgcagttct cggcattcgg cgaaaaattc acgcaacaca gcggcatcct gcaactgatg
    19861 gacgacctcg gcgacgcgct caaaagcgac aagcccgtca atatgctcgg cggcggcaac
    19921 ccggcgcgca ttcccgaaat cgatcgggcg ttcgccgaca tattttccaa gctggcggcg
    19981 gaacacgccg tcgagaacat cggcaactac tccaatcccc aaggcgatgc cgcgctgatt
    20041 gacgcgctga ccgccttccc caaccgcgaa tacggctgga acctgaccgt cggcaatatc
    20101 gcgctgacca acggttcgca aaacgcgttt ttctatttat tcaacctctt cggcggcaaa
    20161 ttcaagcttt cagacgacct ttccgtagag aaagccatcc tgctgccgct cgcgcccgaa
    20221 tacatcggct atgccgacgt gcatgtcgaa gggcggcact tcgtttccgt caaacccaaa
    20281 atcggaaacg tcgaacacga aggcgaagca ggcttcttca aataccgcgt ggactttgac
    20341 gcactggaaa acctgcccga actcaaagcg ggcaaaatcg gcgcgatttg ctgttcgcgc
    20401 ccgaccaacc cgaccggcaa cgtgttgacc gacggcgaaa tggcgcgttt ggacgctttg
    20461 gcgcgtgaac acggcattcc gccgattatc gacaacgcct acggaatgcc gttccccaac
    20521 attattgaca gcggcgtaac gctgaattgg cacgaaaaca tcatcctctg cttcagcctt
    20581 tccaaagtcg gcctgccggg cgttcgcacc ggcatcatcg tcgccgcgcc cgaagccgtc
    20641 aaagccgtca gcagcctgaa cgcgattgtg aaccttgccc cacgcgcttc ggcgcggcca
    20701 tcgccgcccc gctgctggaa agcggcgaga tgaaacggct tgccgaccaa gtcatccggc
    20761 cgttttaccg caatcaggcg caaaccgccg tttcgctgct caagcgcgag ctgggcgcgt
    20821 acccgatgaa aatccacaaa cccgaaggcg cgattttcct gtggctctgg tttgaaaacc
    20881 tgcccgtttc gtcgcaaacc ctgtacgaaa tgctcaaagc cgaaggtacg ctgattattc
    20941 cgggcgaaca tttcttcgtc ggcatcgaca cgcaagacta cccgcacgcg ggcgagtgca
    21001 tccgtatgag tatcgcacag gacgctcaaa cgctggaaaa aggcatcgcc gccatcggca
    21061 aaaccgtccg aaaaccgtac gacaacgttt aaaacgcaaa aaatgccgtc tgaagacctt
    21121 tcagacggca ttttcatccg cattcaatgt cgggaaaaat gcgcccgcac cggtttgcag
    21181 ttttccggaa gatcgggaca cgcgccgagg atgccgccgc tgaagtcgtc taaacggtgg
    21241 aagtcgctgc ccgcgcttgc caacaatccg aagcggtctg ccaaaagcgc gtagttgagg
    21301 cggtcgtttt tgcagcagtt gccgctgtgg acttcgatgc ccgcgccgcc gaggttttta
    21361 aattcttcaa acaggttgcg cttggcggtt gccgacaaat cataacgcat cggatgggca
    21421 atcaccgcca tgccgcccgc gccgttgacg gcggagacgc agtctgccag cgtcgcccat
    21481 tcgtggcgta ccgcgcagga tttgccgtcg cccaagtatt tggtgaacgc ctgctgcttg
    21541 tttttgacgt gtccgttttt gatgaggaac tcggcgacgt gggtgcggct gaccatttct
    21601 ttgtttgccg ccagcgccag cgcgccgtcg tatgcgccgc cgatgccttt cttttcgagc
    21661 ttggcggcga tggcttcaag acgtttcaga cggcctttgc ggacatctgc caacaggttt
    21721 tgcaggtttt cgtcctgctc gtcgaaatcc aaaccgacaa cgtgtatggt acgcccgcgc
    21781 cacgttaccg aaatttccac gccgttaatc aggcgcaaac cgagcctgtc ggcttcggca
    21841 cgcgcttcgg agatgccgcc cgtgtggtcg tggtcggtca acgccagcag cgtgcagccg
    21901 ttttgatgtg cgaggcggac gacttcggcg ggggggagca taccgtcgga aacggtggaa
    21961 tggcagtgca ggtctatcat ggggtgttat gtggtggtga atgaaggacg ggatgtttca
    22021 atgttgtcgg acagtgtggc ggcggcggtc attttaaaaa acaggtgtat ggcaaatgca
    22081 aaggaaaagc cgctatgccg tcattcccgc gcaggcgaga atccagactt tgatttattg
    22141 gaaatgttta aggttaaccg ctatttcaaa cttccggatt cctgctttcg agggaatggc
    22201 gatatgaacg ttttcaattt taatctacta taaaagaccg tctgaaaacg tggttttatc
    22261 aagcccaacc gttttcagac ggcatcgtcc gaccaacccg cttccttcag ttttttccgt
    22321 tgcgcatcgt agcgtgcctt gtccgcccag taaatcgtct gaatgcacgc ctcgccgcag
    22381 tcgctgccgc agcattccca cgactcgggg cggacgggtt cgtccaaaag cggctcgccc
    22441 aaaagggctt cggctttatg cttcagggtc gtatccatcg gcgatttcca agcgcgcgcc
    22501 gtcaaactcg atgacttctc cgccgcgtat tttggccgtt ttgcggattt cggttccgcc
    22561 gttgcgcaac accagccctt cggcgataaa tgcttttgcc tgtccgccgc tttcggcaag
    22621 tccggccaat ttcaagaggt cgcacaaggc gatgtattcg ttgtcttcga gatagacggt
    22681 ggcttccata atgtcccctt ttagaaagag ggcgttattg tagcacctgc cgccgccgca
    22741 cccaaaattg ccgcaaaacc ggcgatgtgt ccgcactgcc tgttccgtaa aaatgccgtc
    22801 tgaaaccccg tatgccgcca tccgtccaaa gaaatcctgc ccaacggcag gctgcaaatc
    22861 ctgttccccg acgaatccgc attgacgctg atgcacatcc tcaaacgcgg actgcccgat
    22921 acaccggcaa tcggcatcaa aacgaaatca aaaacctgtt tgaacgtaaa atctatttaa
    22981 ctgcttgccg tccgtccgaa taaggtatat agttccttat aactagtttg atagtccttt
    23041 atatctatca atactccttg ggaagcctcc gccacacggc aggaggcatt tttttgccgt
    23101 cgtaaaagct caaaaaacat ttgcaggtca tgccgtctga atccgaaacg gcattacctg
    23161 caccgccatc taaagacaac cctgctacaa tacgcctttt attgtccacg ccgattttgc
    23221 catgaccgag ccgacctaca tccccctgcg cctgcatacc gaattctcca ttaccgacgg
    23281 tatggtgcgg attaaaaaac tgattgccaa agcgcaagaa tacggtttgc ctgctttggg
    23341 catcagcgat ttgatgaacg aattcggttt ggtgaaattc tataaagcct gccgcggcgc
    23401 agggattaag cccgtcggcg cggcggacgt gtggataggc aatccgaatg cgcccgacaa
    23461 gccgttccgc gccatgctgg ttatccgcaa cgatgcgggt tatctgcgct tgagcgagct
    23521 tttgacggag gcttatgtcg gccaagaccg caatatccat catgcggaac tcaatcccga
    23581 atggctggaa aacggcgaca acagcggctt gatttgtttg agcggcgcgc attacggcga
    23641 agtgggcgtg aatctgttga acggcaatga agacgcggcg cgtgcggcgg cgttgaaata
    23701 tgcggcatgg tttcccgata cgttttattt agagctgcaa cgcctgcccg aacgccccga
    23761 atgggaggct tgcgtttccg gcagcgtgaa gctggcggag gaactgggtt tgccggtggt
    23821 agcaacgcat ccgacacagt ttatgaaccg cgacgatttc aacgcgcacg aggcgcgggt
    23881 gtgcatcgcg ggcggctggg tgctgacgga caagaaacgt ccgcgcgatt tcacgccgag
    23941 ccagtttttc attccgccgg aaacgatgct ggagcgtttc gccgacttgc ccgaagcctt
    24001 ggaaaacacg gtggaaatcg ccaaacgctg caacttgcac atcacattgg gcaaaaactt
    24061 cctacccctt ttccccacgc ccgacggttt atcactcgat gactgtctca tcaaactctc
    24121 caacgagggt ttgcaggaac gcatggttca gctttatccc gacgaggcgg aacgggcggc
    24181 aaaaatgccg gaatatcagg agcggctgga ctttgagctg aacatcatca tccaaatgaa
    24241 attccccggc tatttcctta tcgtacaaga ctttatcaac tgggcgaaaa cgcacggctg
    24301 tccggtcggg ccgggacgcg gttcgggcgc gggttcgctg gtggcgtatt cgctgaagat
    24361 taccgacctc gacccgctga aatacgcgct gctgttcgag cgtttcctaa accccgaacg
    24421 cgtttccatg cccgactttg acgtggactt ctgtcaggca aaccgcggcc gcgtgattga
    24481 atacgtgcgc gaaaaatacg gcgctcaggc ggtcagccag attgtgactt tcggcacgat
    24541 gtcgtccaaa gcggtcatcc gcgacgtggg gcgtgtgctg gaactgccgt ttatgctgtg
    24601 cgacaaactg tccaagctga ttccgttgga agccaacaaa cccctgagtt tggacgacgc
    24661 gatgaaggcg cagccgcaga ttcaggaatt gcttgaagcg gaagaagcgg acgaactgat
    24721 tacgctggcg aaaaaactgg aagacctgac gcgcggtttg ggtatgcacg caggcggcgt
    24781 gttgattgcg ccgggcaaga tttccgatta cagccccgtg tatcaggcgg acgaatccgc
    24841 ctcgcccgta tccatgtacg acaagggcga cgtggaagac gtgggtttgg tgaagttcga
    24901 ctttttgggc ctgcgcaacc tgaccattat cgaaatggcg cagaacaaca tcaaaaacac
    24961 cgccggcgat atcgtcgatg tcggcaagat tccgcttgac gaccagactg cctaccaaat
    25021 cttccgcgat gcgaacacca ccgccgtctt ccagttcgag tcgaccggca tgaaaaaaat
    25081 gctgaaaacg gcgcatacga ccaagtttga agaactcatc gccttcgtat cgctctaccg
    25141 acccggcccg atggacaaca ttcccgactt cgtcgcacgc atgaagggac aggaattcca
    25201 atacatccac ccgctgctgg aaggcatcct cgcgccgacc tacggcatta tggtgtatca
    25261 ggaacaagtg atgcaggcgg cgcagattat cggcggctac tcgctcggcg gcgcggacct
    25321 gctgcgccgc gccatgggta agaaaaagcc cgaagagatg gtgaaacacc gcgaaatctt
    25381 cgccgaaggt gcggcaaaac aaggcatttc gcgcgaaaaa tccgacgaaa tcttcaacta
    25441 catggaaaaa ttcgccggct acggtttcaa caaatcccac gccgccgcct acgccctgat
    25501 ttcctaccag accgcatggc tcaaagccca ctatcccgcc gaatttatgg cggcgacgat
    25561 gtcgtccgaa ttggacaaca ccgaccagct caaacatttc tacgacgact gccgcgccaa
    25621 cggcatcgag ttcctgccgc ccgacattaa cgaatccgac taccgcttca cgccgtatcc
    25681 gaacatgaaa atccgctacg cactcggcgc gattaaaggc acgggcgaag ccgccgtcga
    25741 atccatcatc gccgcgcggc aaagcggcgg caaatttacc ggcctgttgg acttctgcga
    25801 gcgcgtcggc aaagaacaca tgaaccgccg caccctcgaa gccctgatac gcggcggcgc
    25861 gttcgacagc atcgaaccca accgcgccat gctcttggcg aacatcgacc ttgccatgga
    25921 caacgccgac caaaaagccg ccaacgccaa tcagggcggg ctgtttgaca tgatggaaga
    25981 cgccatcgaa ccggtgcggc tcatcgacgc acccatgtgg agcgaatcgg aaaaactcgc
    26041 cgaagaaaaa accgtcatcg gcttttacct gtccggccac ccgttcggcc cgtatgccca
    26101 agaagtccgc caaatcgccc cgaccaaatt aggccgtctg aaaccgcaag acagcgtgcg
    26161 cctcgccgga ttcgttaccg ccgtgcgcac catgatgggc aaacgcggca aaatcgcctt
    26221 cgtcagcctc gaagattcga gcgggcaggc tgaaatcatg gtcggcggac aaacgctgga
    26281 aaactgcgcc gactgcctca aagccgacca agtgctgatt atcgaatcca aagtcagccg
    26341 cgacgattac ggcggcggcg acgggctgcg catcatggca aaccaagtca tgaccctgca
    26401 aacggcgcgc gaacgctacg cccgcagcct cagcctcgcc cttgccccgc atcacgacat
    26461 cggcggactg gtacggctgc tcgccgccca ccaactgccc gacacgccgc gcatcccgct
    26521 tcaattgtcg tatgccaacg aaaaagcgtc gggcaggctt caagtgcctc cgaaatggac
    26581 ggttacaccg agttccgcat tgttcggcga actggaaaca ttgctcggca gccggtcggt
    26641 gcgcgtgaat tggtaaccaa aaatacaaat gccgtctgaa gcccaaaacc ggtttcattc
    26701 gtactttatt cgaatgattg aataaaagta actgccaaga aaaacgtatt ttttggttat
    26761 ttcgccagcc taaataaatc aaccggggcg attgatatcc gtgtacatga cacagacagc
    26821 gccaaaggga aaaacggcat tttcaaaagt atcggtgtca aaaccgccct ttcattccaa
    26881 aaataccaaa tcgacgaacc gggcaaagaa atcagaccgt gccgcctgaa aaaacgcccg
    26941 cccgtccgtt aaattaatct atccctgttt caggcggcct gaaacaggga tttttatatc
    27001 aagataaaat gagaacggga gcgacaacca cgggcaaagt cggcgcgaac tatcaaaaat
    27061 tgtagcactg cgaaatgagg acgggagcaa taacccttag gtagctcttg ttatagcgga
    27121 ttaacgaaaa tcaggacaag gcgacgaagc cgcagacagt acaaatagta cggaaccgat
    27181 tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg gggcaacgcc
    27241 gtaccggttt ttgttaatcc gctatatttt ccgatgcaaa acaaagcagt catatatttg
    27301 attcccccta ccgttgccac gcttccctca aatattcgac gcagtcggtc agcgagtaaa
    27361 acgggacatt gccgtggtcg gcattcggat attcccggaa aaatacggcg gtcccgcgcc
    27421 tgtccaactc tgccgccatt tgttcggcct gccctgccat gtcgcgttct tccctgcgtt
    27481 tgcaaccgct gctccgctcg agtgcgccga tgttgaggca ggcatcgatg ccgtccagcc
    27541 ggttttcaga cggcataaag tcgagtatcc gcctgttgtg ccaccaaatc gaggggatac
    27601 gagccaatgc cgtctgaaac agcggtggga aagcagggaa tacagtccga acagtgcgcc
    27661 gaacgagtgt ccgaatacgg cggtttcatt acggttaagg gtgtagcggc tttctaaaaa
    27721 ggcggtcagt tcgctgtcga taaagtcggc gaagcggtct gcctgtccga actgccgccg
    27781 ttcgtctgct gtggcgttgt ctccaagcgg cggcgtgtag tcggcggcac gctgcgccag
    27841 gtcgcgcaca ctgcctgtcg tgtagccgat accgacaatc aggcaggggg cgttgcttcg
    27901 ggtaacgggg ttgttcatca gcaactgcat gatgttgtac agcgcgggaa aaaggcttcg
    27961 ccgtcgagga caaagaggac gggatagcct tcagactgca tttcgccgag tgttgccgtc
    28021 tgaatccgat agattcgccc cgtgcaggtg gatttgattt cggtttcaaa ggcttggggc
    28081 agtatggcag gttggaatgt gtcggtcggt atgggtttca tgatgttcgg cttgtgggtc
    28141 agactggcgg caagcggtaa aaccgaaccg gcaaagcggt ctgcctgccg gttcggtctg
    28201 ttttccttcg caatgccata ctccggttgt gagcgcatag ggtatgccgc gcagcttgtt
    28261 gtggtttgat tatgctgcgg ctgccgtttc agacggcata ttggtcttta aaaactgtaa
    28321 cgcaggtttg ccgtcaggct gcgctccgaa ccgggaatgt taaaggtgtt cgtgccgccg
    28381 acgcgggcgt agtaatggcg gttgaagatg ttgtcggcat tgatttgcag cttcagcttg
    28441 ggcgtgaagc ggtatgccgc catcgcatcg aacgtggcat aaccgcctgc atgcatccct
    28501 gcagatgaag taatgccgct catcgcgttc acgccgccgc cgacggtcag cccgggcgta
    28561 acttggtaag tcgtccacag gtttgcgctg tgtttgggca ccagcaggaa gatgccgtcg
    28621 tcgcgtggat tggcggcggt tttgatttgg ctgtgcagat agctgtaacc tgcatggatt
    28681 tgccatttcg gtgtaatcgc accgctgatt tcggtctcaa cgccttccat cacgcgtttg
    28741 cccaatgcgg cgtaacgggt gttgcggttg ttcgggttcg gcggcgtttt tgtctttcag
    28801 gcggcagggg gagacgcggg tattgaggcg gtcatccata tagctgcctt taacgagctg
    28861 taatcgccgt ttttctcggt ggcaatcgcg ttgtacgaac gctgcccttt gatatggacg
    28921 gtttccaaat ccgccgtttg tgcggcaaaa accggagacg agagtgctgc caaaaccgtg
    28981 gcggcggtca tattgatgcg gaaaactgac ataaactgtc ccatctgtat aaatgataat
    29041 ggttctattt taataaagca caacgcggct tgttcggaaa aacatatcgc tcagccgaca
    29101 aattttgtcg aaaatgcgac acgtctgcgt tttccgcata aaatctgctt ttttactgca
    29161 accaacctgc catgaccccg cccaaactca tcatcttcga ctgggacggc acgcttgccg
    29221 atacgaccca acccatcatc gacaccatgc gccgcagctt cgccgaatgc ggttttccgc
    29281 cgcccgaagc ggagcgcgcg tccgcagcct gatcggatac agcctgcccg aaatcatccg
    29341 cgccctgctc gaaatgcctt ctgaagctgc cgttgccgac atcgcgcgca cttattccgc
    29401 gcattacctc aatcccaaca accgcaatat gacactcttt cccgatgccc cgccctgtct
    29461 ggacaagctc aaagcgcaag gcttccggct tgccgtcgcc acgggcaaag ggcgggcggg
    29521 tttggacaac gccatcagcc aaaccgccac cggcggctat tggctcgcca ccgcctgcgc
    29581 gggggaatac ccctccaaac cctcgcccga aatggtattc ggactctgcg gcgaactggg
    29641 actcgacccg aaagaggcat tggttgtcgg cgatacggcg cacgacctgc atatggcggc
    29701 aaacgcaggc gcggcggcag tcggcgttgc caccggcgca cattcgcgcg aacagctcct
    29761 tggcgcaccg catctcgccg tattggacgg tttgtccgaa ctgcccggtt ttcttgcacg
    29821 acattacgcc tgattggttt ccgcatccgg cacgcggcaa aaatgccgtc tgaagcct
//
LOCUS       DAXGCP010000014        29538 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.014, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000014 DAXGCP010000000
VERSION     DAXGCP010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29538)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29538)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29538
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.014"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            421..1296
                     /gene="prpB"
                     /locus_tag="ACFJCW_000565"
                     /pseudo
     CDS             421..1296
                     /gene="prpB"
                     /locus_tag="ACFJCW_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
     gene            1381..2529
                     /gene="prpC"
                     /locus_tag="ACFJCW_000566"
     CDS             1381..2529
                     /gene="prpC"
                     /locus_tag="ACFJCW_000566"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HFC4150788.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSHRGYD
                     ILNLAQKCEFEEVAHLLIHGHLPNKFELAAYKTKLKSMRGLPIRVIKVLETLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPDSEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETVGGHFLHLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSC
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEADIRERIGRKEIVIGFGHPVYTISDP
                     RNVVIKEVARGLSREAGDMRLFDIAECLESVMWEEKKMFPNLDWFSAVSYQKLGVPTA
                     MFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEER"
     gene            2681..3469
                     /locus_tag="ACFJCW_000567"
     CDS             2681..3469
                     /locus_tag="ACFJCW_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HFC4150789.1"
                     /translation="MEDLYIILALGLVAMIAGFIDAIAGGGGLITLPALLLAGIPPVS
                     AIATNKLQAAAATFSATVSFARKGLIDWKKSLPIAAASFAGGVVGALSVSLVSKDILL
                     AVVPVLLIFVALYFVFSPKLDGSKEGKARMSFFLFGLTVAPLLGFYDGVFGPGVGSFF
                     LIAFIVLLGCKLLNAMSYTKLANVACNLGSLSVFLLHGSIIFPIVATMAVGAFVGANL
                     GARFAVRFGSKLIKPLLIVISISMAVKLLIDERNPLYQMIVSMF"
     gene            3546..6151
                     /gene="acnD"
                     /locus_tag="ACFJCW_000568"
                     /pseudo
     CDS             3546..6151
                     /gene="acnD"
                     /locus_tag="ACFJCW_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
     gene            6702..7864
                     /gene="prpF"
                     /locus_tag="ACFJCW_000569"
                     /pseudo
     CDS             6702..7864
                     /gene="prpF"
                     /locus_tag="ACFJCW_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
     gene            8176..9375
                     /locus_tag="ACFJCW_000570"
     CDS             8176..9375
                     /locus_tag="ACFJCW_000570"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC4150790.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFNKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAIGRRIAHGGEKYHESVL
                     IDQDILDELKACIPFAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTGMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAVKN
                     GKSVDTGMGFTPIEGLVMGTRCGDTDPGVYSYPTFHAGMDVAQVDEMLNKKSGFPGIS
                     ELPNDCRTLEIAADEGREGARLALEVMTYRLAKYIASMAVACGSVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            9486..10106
                     /locus_tag="ACFJCW_000571"
     CDS             9486..10106
                     /locus_tag="ACFJCW_000571"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC4150791.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIINQGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKIDNVQFRQLKAATPGPYTFILQ
                     ATKDAPARALHPKRKTIGLRIPDNAVAQALLEELGGPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTDPTTVIDMTDGTELVRRGFGDTAVFGL"
     gene            complement(10130..10258)
                     /locus_tag="ACFJCW_000572"
     CDS             complement(10130..10258)
                     /locus_tag="ACFJCW_000572"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150792.1"
                     /translation="MPPKPAFGRHFVCRFKRIFRPGAIRAGISGCRRQGARCRLNG"
     gene            complement(10268..10711)
                     /locus_tag="ACFJCW_000573"
     CDS             complement(10268..10711)
                     /locus_tag="ACFJCW_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HFC4150793.1"
                     /translation="MYLTQHTDYGLRVLIYTAVNDDALVNIATIASTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPERINIGAVVRHLEPMQLVECMGPNNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYESKIPIAVR"
     gene            10885..11253
                     /locus_tag="ACFJCW_000574"
     CDS             10885..11253
                     /locus_tag="ACFJCW_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC4150794.1"
                     /translation="MKPLKRHSALVGLSREHHHSLSLCVRMLRTPGADHRAELELHFA
                     ELETHFREEEAKFAPIWQNVAPELKTRFEGDHAKLRQMMASPECGNAAWNTAFATTLR
                     DHARFEERELFPAVEPFLPA"
     gene            11298..12452
                     /locus_tag="ACFJCW_000575"
     CDS             11298..12452
                     /locus_tag="ACFJCW_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HFC4150795.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVIAFLLTAVATWTGQPPTRGGVLVGLTAFWLAARIAAFIPGWG
                     AAASGILGTLFFWYGAVCMALPVIRSQNRRNYVAVFAIFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGMRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAIL
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNSIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(12510..13382)
                     /locus_tag="ACFJCW_000576"
     CDS             complement(12510..13382)
                     /locus_tag="ACFJCW_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HFC4150796.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVINRASVVIDADSIGGADLVLIATPVATVPAVLTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRNGAQAAQFGLFRHRKLIITPHGGEDSDGI
                     ALVENLWRAVGADIFTMDAQHHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLADILTADDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            13467..14279
                     /locus_tag="ACFJCW_000577"
     CDS             13467..14279
                     /locus_tag="ACFJCW_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HFC4150797.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGADWVLLPEY
                     WVLMGANDTGKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGCDGVRTGLYHKMHLFGFSGLGERYAEADTIRAGREVPHLSAEGMPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGIVTADIDANRLNSVRNRLPALKHRVLDAV"
     gene            complement(14397..14552)
                     /locus_tag="ACFJCW_000578"
     CDS             complement(14397..14552)
                     /locus_tag="ACFJCW_000578"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150798.1"
                     /translation="MPSEPSDGIFDALAVYGRGAGAVKYPNRHSRQHRNLETRHSRAG
                     GNLGCGI"
     gene            complement(14566..15366)
                     /locus_tag="ACFJCW_000579"
     CDS             complement(14566..15366)
                     /locus_tag="ACFJCW_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4150799.1"
                     /translation="MNPARKKTFSSLLFSSLLFPSAAQAASEDGGRGPYVQADLAYAY
                     EHITHDYPKPTAPNKNKISTVSDYFRNIRTHSIHPRVSVGYDFGGWRIAADYARYRKW
                     NNSKYSVNIKRVKENNGSGKKLTQDLKTENQENGTFHAVSSLGLSAVYDFDTGSRFKP
                     YAGVRVSYGHVRHSIDSTKKTTDVITAPPTTSDGAPTTYNANPQTQNPYHQSDSIRRV
                     GLGAMAGVGIDVAPGLTLDAGYRYHNWGRLENTRFKTHEASLGVRYRF"
     gene            15940..16815
                     /locus_tag="ACFJCW_000580"
     CDS             15940..16815
                     /locus_tag="ACFJCW_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HFC4150800.1"
                     /translation="MFYQILALIIWGSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFA
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWSVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANASGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATFA
                     AGRLSRRDAQNGNAV"
     gene            16931..18138
                     /locus_tag="ACFJCW_000581"
                     /pseudo
     CDS             16931..18138
                     /locus_tag="ACFJCW_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768606.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
     gene            18197..19324
                     /gene="pheA"
                     /locus_tag="ACFJCW_000582"
     CDS             18197..19324
                     /gene="pheA"
                     /locus_tag="ACFJCW_000582"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HFC4150801.1"
                     /translation="MLECTANYRSGEIMSQTIDELLIPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDDCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIRHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     RLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKAIGSYPTAVL"
     gene            19358..20101
                     /gene="recO"
                     /locus_tag="ACFJCW_000583"
     CDS             19358..20101
                     /gene="recO"
                     /locus_tag="ACFJCW_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HFC4150802.1"
                     /translation="MSEHRVNHEPVFMLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVPFVPASVSWYGSQELKTLHRAEWMGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMSELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTGALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLLIGTLLPEGLKSRQVLEQIRQFDRNTA"
     gene            20154..20882
                     /gene="pdxJ"
                     /locus_tag="ACFJCW_000584"
     CDS             20154..20882
                     /gene="pdxJ"
                     /locus_tag="ACFJCW_000584"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HFC4150803.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAEFAKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAH
                     SHAEQIRQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPVAQILAIRELNIGHSLISQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            20932..21309
                     /gene="acpS"
                     /locus_tag="ACFJCW_000585"
     CDS             20932..21309
                     /gene="acpS"
                     /locus_tag="ACFJCW_000585"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HFC4150804.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSEWLEEQG
                     ISRVSLSMADEGDTVLAFAVAEK"
     gene            21391..22200
                     /locus_tag="ACFJCW_000586"
     CDS             21391..22200
                     /locus_tag="ACFJCW_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC4150805.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLGSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFGEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWEGGPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLYGENSMGAYRVLP
                     LGSAGGSGANVLMEAAQWQDRSEHAGSVWMMVQTREQWRQAQEKGADVVVWRVCDDVQ
                     AQEAAEALRQGVSVPLVLAANGQTVARYGKLWLGLGAHAVVRDETIGKNHE"
     gene            22193..22624
                     /locus_tag="ACFJCW_000587"
     CDS             22193..22624
                     /locus_tag="ACFJCW_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150806.1"
                     /translation="MNKNRKLLLAALLLTAFAAFKLVLLQWWQAQQPQQPQAVAAQCD
                     LTEGCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFER
                     QPSGNWQAARIRLPVCVEGRRDFTADITIGSRTFQTAFTAE"
     gene            22673..23815
                     /locus_tag="ACFJCW_000588"
     CDS             22673..23815
                     /locus_tag="ACFJCW_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HFC4150807.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELGSLGCTEVRAFDGGVSCRGGL
                     EQAYAANLHSRTAGRILLRLTKGTYRTERDIYKLAKNINWFNWFTLQQTFKVKIEAKR
                     ANVKSLQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAAGRA
                     PGMMRRFGFEKLQNFDKTLWADLRRRAEAQTRPVRAPIAGSDNGRRIVQTALDNAHNA
                     GADDIVSFSVAGAQSVRPNGENGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKHYAG
                     WRVGMFTGDREMPKFMRLLPKRKIPLYNGNLDCRLFLIDMVQGSNR"
     gene            complement(23861..24679)
                     /locus_tag="ACFJCW_000589"
     CDS             complement(23861..24679)
                     /locus_tag="ACFJCW_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HFC4150808.1"
                     /translation="MKGMDKLRYQRDFLNIRPIFTAGEQEYLTELSDRLPLSVLTDSV
                     RNIEEIGIDFVYSPAKLEGNTYNQYDTQALLKLGQTAGGKLYSDAVMLINLRESYRHL
                     LSGLDSPKPFDWLDFLKTTHSLISENLLEKGSGGVVRRDSVTISGTDYTPLSNPQSLD
                     TELKWLLQEAPKIENPFDRAVYLHNNLAYLRYFKDCNKRTARNCMTLSLMRSGFFPCV
                     FSPDSYPAYAEAVVAYYETGDYGLFKKYFISAYENTVNKYGPQPDVDIFRNFSI"
     gene            complement(24761..26011)
                     /locus_tag="ACFJCW_000590"
     CDS             complement(24761..26011)
                     /locus_tag="ACFJCW_000590"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HFC4150809.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPGRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFALPPVGGFKDRLVVDLYPHGMDADDPMMALLNGS
                     LNKTLRGSPEADLAQNTTPRPGRGKNGRRPVIMLDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYINTSVLKRG"
     gene            complement(26008..26469)
                     /gene="tsaE"
                     /locus_tag="ACFJCW_000591"
     CDS             complement(26008..26469)
                     /gene="tsaE"
                     /locus_tag="ACFJCW_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HFC4150810.1"
                     /translation="MSDFSPVPRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFALHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHGGGGRKCLLTAHTERGRESLPL"
     gene            26658..27470
                     /gene="murI"
                     /locus_tag="ACFJCW_000592"
     CDS             26658..27470
                     /gene="murI"
                     /locus_tag="ACFJCW_000592"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HFC4150811.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLGHDVKAMVIACNTIAAVAGRKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRDNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEE
                     TARVLAQEGLLDTGNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            complement(27589..27732)
                     /locus_tag="ACFJCW_000593"
     CDS             complement(27589..27732)
                     /locus_tag="ACFJCW_000593"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150812.1"
                     /translation="MPSEAFQAAFAAFGHLKIPSFPRRRESEYIRTETCIPSFPRKRE
                     SRT"
     gene            complement(28198..29307)
                     /gene="fic"
                     /locus_tag="ACFJCW_000594"
     CDS             complement(28198..29307)
                     /gene="fic"
                     /locus_tag="ACFJCW_000594"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HFC4150813.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTTDKLFQSLQMDTERQDPATKEALQYRT
                     ALLAGYESLASRPLCTQTAIMVCNAIKHPYETAIRKTGGTALKGGNSGNVVYTPPEGE
                     ETIRGKLANWERFIHESGDLDPLVIMAAAHYQFEAIHPFTDGNGRTGRILNSLLLIEK
                     GLLDLPILYLSRYIIENRADYYRLLLGVTERQDWESWIIYILDGVADTADWTVSKIDA
                     IRCLFEQTRQHIRTHAQGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELS
                     GIGVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSF"
BASE COUNT         6440 a         7963 c         8402 g         6733 t
ORIGIN      
        1 attttatcgg aaacaaataa gttaaaatta atttatatta atcataatgt taaaataaaa
       61 taataaaatt atgtaattag tctccttaaa aatgtttgac attccagtct tgtgttttag
      121 attaccgaaa aataaaacta cataatacta caaaggaaca ttactatgaa accaattcag
      181 atgtttttcc cttttctgaa taatcccctt gttttcttct tgtctgcggt tttgccgcat
      241 aattccgaac ggtctgctgt ttttctttga ttcgttttaa atatcaataa gataattttt
      301 cccatatatt tttaatgatt ggattgggat gcccgacgcg tcggatggct gtgttttgcc
      361 gtccgaatgt gatggaagcc tgtccatact gaaaaaaaaa gtctataaag gagaaatatg
      421 atgagtcaac actctgccgg agcacgtttc cgccaagctg tgaaagaatc gaatccgctt
      481 gccgtcgccg gttgcgtcaa tgcttatttt gcacgattgg ccacccaaag cggtttcaaa
      541 gccatctatc tgtccggcgg cggcgtggca gcctgttctt gcggtatccc tgatttgggc
      601 attaccacaa tggaagatgt gctaattgac gcacgacgca ttacggacaa cgtggatacg
      661 cctctgctgg tggacatcga tgtgggttgg ggcggtgcat tcaatattgc ccgtaccatt
      721 cgcaactttg aacgcgccgg tgttgcagcg gttcacatcg aagatcaggt agcgcaaaaa
      781 cgctgcggcc accgtccgaa caaagccatc gtttccaaag atgaaatggt cgaccgcatc
      841 aaagctgccg tagatgcgcg cgttgatgag aacttcgtga ttatggcgcg taccgatgcg
      901 ctggcggtag aaggtttgga tgccgctatc gaacgcgctc aggcttgtgt cgaagccggt
      961 gcggacatga ttttccctga agccatgacc gatttgaaaa tgtaccgtca atttgcagat
     1021 gcagtgaaag tacctgtatt ggccaacatt accgagtttg gtgttacacc gctttatacg
     1081 taaagcgagt tggctgaaaa cggcgtgtca ctggtgctgt atccgttgtc atcattccgc
     1141 gcagcaagca aagccgctct gaatgcttac gaagcgatta tgcgcgatgg cactcaggcg
     1201 gcggtggtgg acagtatgca aacccgtgcc gagctgtacg agcatctgaa ctatcatgcc
     1261 ttcgatcaaa aactggataa attgtttcaa aaatgattta ccgctttcag acggcctttc
     1321 aacaaatccg catcgaccgt ctgaaaaata aaacccataa aaatacaaag gagaaatacc
     1381 atgactgaaa ctactcaaac cccgaccttc aaacctaaaa aatccgttgc gctttcaggt
     1441 gttgcggccg gtaataccgc tttgtgtacc gttggccgta ccggtaacga tttgagccat
     1501 cgcggttacg acattctaaa tttggcacaa aaatgcgagt ttgaagaagt cgcacacttg
     1561 ctgattcacg gccatctgcc caacaaattc gagctggccg cttataaaac caagctcaaa
     1621 tccatgcgcg gcctgcctat ccgtgtgatt aaagttttgg aaaccctgcc tgcacatacc
     1681 catccgatgg acgtgatgcg taccggcgta tccatgctgg gctgcgttca tcccgaacgc
     1741 gaaagccatc ccgacagcga agcgcgcgac atcgccgaca aactgatcgc cagcctcggc
     1801 agcatcctgc tctactggta tcaatattcg cacaacggca aacgtattga agttgaaagc
     1861 gacgaagaga ccgtcggcgg tcatttcctg cacctgttgc acggcaaacg cccaagcgaa
     1921 tcacacatca aagccatgca tgtttcactg attctgtatg ccgaacacga gttcaacgcc
     1981 tccaccttta ctgcccgcgt gattgccggt acgggttcgg atatgtattc ctgcatcacc
     2041 ggcgccatcg gcgcgcttaa aggtccgaaa cacggcggtg cgaacgaagt cgcctacgac
     2101 atccaaaaac gctaccgcaa cgccgacgaa gccgacatcc gcgaacgcat cggccgcaaa
     2161 gaaatcgtga tcggtttcgg ccatccggtt tacaccattt ccgacccgcg caacgtcgtg
     2221 attaaagaag tggcgcgcgg tttgagccgg gaagcgggcg acatgcgcct cttcgacatc
     2281 gccgaatgct tggagagcgt gatgtgggaa gagaaaaaaa tgttcccgaa tctggactgg
     2341 ttctctgccg tttcctacca aaaattgggc gtaccgaccg ctatgttcac accgctgttc
     2401 gtgatttccc gtacaaccgg ttggagcgca cacgtcctcg agcaacgcaa agacggcaaa
     2461 atcatccgtc cgagcgcaaa ctacaccggc cctgaagatt tggcgtttgt ggagattgaa
     2521 gaacgataat tgaagaatgc aatagcagtt tgttctttat ttcggtatgc aaagctgagg
     2581 atttcagacg accttgcctt attggaaagg ttgtctgaaa taagtttaat ctaataggag
     2641 aagataatcc tgtattggcg caagtaacag gataagaaac atggaagatt tatacataat
     2701 actcgctttg ggtttggttg cgatgatcgc cggatttatc gatgcgattg cgggcggggg
     2761 tggtttgatt acgctgcctg cactcttgtt ggcaggtatt cctcccgtgt cggcaattgc
     2821 caccaacaag ctgcaagcag ccgctgctac gttttcggct acggtttctt ttgcacgcaa
     2881 aggtttgatt gattggaaga aaagtctccc gattgccgca gcatcgtttg caggcggcgt
     2941 ggtcggtgca ttatcggtca gcttggtttc caaagatatt ttgctggcgg tcgtgccggt
     3001 tttgttgata tttgtcgcgc tgtattttgt gttttcgccc aagctcgacg gcagtaagga
     3061 aggcaaagcc agaatgtctt tttttctatt cgggctgacg gttgcaccgc ttttgggttt
     3121 ttacgacggt gtgttcggac cgggtgtcgg ctcgtttttt ctgattgcct ttattgtttt
     3181 gctcggctgc aagctgttga acgcgatgtc ttacaccaaa ttggcaaacg ttgcttgcaa
     3241 tcttggttcg ctatcggtat tcctgctgca cggttcgatt attttcccga ttgtggcaac
     3301 gatggcggtc ggtgcgtttg tcggtgcgaa tttaggtgcg agatttgccg tccgcttcgg
     3361 ttcgaagctg attaagccgc tgctgattgt catcagcatt tcgatggctg tgaaattgtt
     3421 gatagacgag agaaatccgc tgtatcagat gattgtttcg atgttttaaa ccctttcaga
     3481 cgactccttc aaaacatcgg ctgaaaccca aaccacaaga aaaatagatc cacaggagaa
     3541 ccgacatgac tgccaaccaa agttaccgca aaccgctgcc cggtacggat ttggaatact
     3601 acgacgcgcg tgcggcgtgt gaggacatca aacccggctc ttacgacaag ctgccgtaca
     3661 cgagccgcat tttgtctgag aacttggtca accgcgcgga caaagtcgat ttgccgatgc
     3721 tgcaaagctg gctgggccag ttgatagaag ggaagcagga aatcgatttt ccgtggtatc
     3781 ccgcgcgggt ggtgtgccac gatattctgg ggcagaccgc gctggtggat ttggcaggct
     3841 tgcgcgatgc gattgccgaa aaaggcggcg atcctgccaa agtgaatccg gtggtgcaga
     3901 cgcagcttat cgtcgaccac tctttggcgg tggagtgcgg cggttacgat cctgatgcct
     3961 tccgcaaaaa ccgcgaaatc gaagacagac gtaacgaaga ccgtttccac ttcatcaact
     4021 ggacaaaaac cgcatttgaa aatgtggacg tgattccggc gggcaacggc atcatgcacc
     4081 aaatcaatct ggaaaaaatg tcgcccgtcg tccaagtcaa aaacggcgtg gctttccccg
     4141 atacctgcgt cggcacggac tcgcatacgc cgcacgttga tgcgctgggc gtgatttccg
     4201 tggcgtgggc ggtttggaag cggaaaccgt gatgctggga cgcgcgtcca tgatgcgcct
     4261 gcccgatatt gtcggcgtgg agctgacggg caaacggcag gcgggcatta ctgccacaga
     4321 catcgtgttg gcactcaccg aattcttgcg taaagagcgc gtggtcgggg cgtttgtcga
     4381 atttttcggc gagggcgcga gaagcctgtc tatcggcgac cgcgcgacca tttccaacat
     4441 gacgccggag ttcggcgcga ctgccgccat gttcgccatc gacgcgcaaa ctattgatta
     4501 tttgaaactg accggacgtg acgacgcgca ggtgaaattg gtggaaacct acgccaaaac
     4561 cgcaggctta tgggcaggtg gcttgaaaac cgccgtttat ccgcgcgttt tgaaatttga
     4621 tttgagcagc gtaacgcgca atatggcagg cccgagcaac ccgcacgcgc gttttgccac
     4681 cgccgatttg gcggcgaaag ggctggcgaa gccttacgaa gagccttcag acggccaaat
     4741 gcctgacggt gcagtgatta ttgccgcgat tacttcgtgt accaatactt ccaacccgcg
     4801 caacgttgtc gccgccgcac tgttggcacg caatgccaac cgcctcggct tgaaacgcaa
     4861 accttgggtg aaatcttcgt ttgccccggg ttcaaaagta gccggaatct atttgaaaga
     4921 agcaggcttg ttgcccgaaa tggaaaaact cggcttcggt atcgtcgcct tcgcatgtac
     4981 cacctgtaac ggcatgagcg gcgcgctcga cccgaaaatc caacaagaaa tcatcgaccg
     5041 cgatttgtac gccaccgccg tattgtcagg caaccgcaac ttcgacggcc gtatccatcc
     5101 gtatgcgaaa caggctttcc tcgcttcgcc tcctttggtc gttgcctacg cattggcagg
     5161 tagcatccgt ttcgatattg aaaacgacgt actcggcgtt gcagacggcc gcgaaatccg
     5221 cctgaaagat atctggccga cagacgaaga aatcgatgcc atcgttgccg aatatgtgaa
     5281 accgcaacaa ttccgcgaca tttatatccc gatgtccgac accggcacag cgcaaaaagc
     5341 accaagcccg ctgtacgact ggcgaccgat gtccacctac atccgccgtc cgccctattg
     5401 ggaaggcgca ctggcagggg aacgtacatt aagaggtatg cgtccgccgg cgattttgcc
     5461 cgacaacatc accaccgacc acatctcgcc atccaatgcg attttggccg gcagtgccgc
     5521 aggcgaatat ttggcgaaaa tgggtttgcc tgaagaagac ttcaactctt acgcaaccca
     5581 ccgcggcgac cacttgaccg cccaacgcgc aaccttcgcc aatccgaaac tgtttaacga
     5641 aatggtgaga aacgaagacg gcagcgtacg ccaaggttcg ttggcacgcg ttgaaccaga
     5701 aggccaaacc atgcgcatgt gggaagccat cgaaacctat atgaaccgca aacagccgct
     5761 tatcatcatt gccggtgcgg actatggtca aggctcaagc cgcgactggg cggcgaaggg
     5821 cgtgcggctg gcgggtgtgg aagccatcgc cgccgaaggt ttcgagcgca tccaccgcac
     5881 caacctcatc ggcatgggcg tcttgccgct gcaattcaaa cccggcacca accgccatac
     5941 cctgcaactg gacggtacgg aaacctacga cgttgtcggc gaacgcacac cgcgctgcgg
     6001 cctgaccctc gtgattcacc gtaaaaacgg agaaaccgtc gaagttccgg tcacctgccg
     6061 ccccgatacc gcagaagaag tattggtata tgaagccggc ggcgtgttgc aacggtttgc
     6121 acaggacttt ttggaaggga acgcggctta gagttcgtct gaaaagcaag acgtagcgtg
     6181 ggtcgggttc tcattcacgt aattcccgat atggcaggca tttactgtaa atcgtcattc
     6241 ccgcgcaggc gggaatccag aaagtggaat tgaggaaacc tttttatccg atgagtttct
     6301 gtgcggataa atctggattt ccgcctacgc gggaatgacg gggtttaata atctaccgta
     6361 tcacaacaca gcagccgtag attggggcga accccgacag tttgcggaat caaacggctt
     6421 tggtcggagt ggtagcctaa tgtacttctg gaaagtgggt gtagcgtggg ctttgcccac
     6481 gaaataaagg ctgaattgac atggtatagc ggattaacaa aaatcaggac aaggcggcgg
     6541 gccgcagaca gtacggatag tacggaaccg atccgcccgg tgcttgggca tcttagggaa
     6601 ccgttccctt tgagccgggg cggggcaacg ccgtaccggt ttaaattaat ccactataaa
     6661 aatcgtgggc agagcccacg ctacataagg agaaccctaa aatgccgcaa atcaaaatcc
     6721 ccgccgttta ctaccgcggc ggtacatcta aaggcatttt cttcaaacgc accgatctgc
     6781 cggcagctgc gcaggaagca ggcggggcgc gcgacaaaat cctcttgcgc gtactcggca
     6841 gccccgaccc ttacggcaaa cagattgacg gtttgggcaa cgccagttcg tccaccagca
     6901 aagctgtgat ttcggacaaa tccgaacgcg ccgatcacga tgtcgattac ttgttcggac
     6961 aagtttccat cgacaaacca tttgtcgatt ggagcggcaa ctgcggcaac cttaccgccg
     7021 ccgtgggcgc attcgccatc gaacagggct tggtcgataa atccaaaatc ccttcagacg
     7081 gcatctgcac ggtcaaaatc tggcagaaaa acatcggcaa aaccattatt gcccatgtgc
     7141 cgatgcaaaa cggagcagtg ttggaaacag gcgatttcga gcttgacggc gtaattttcc
     7201 ggcagccgaa gtacaaatcg aatttttaga tccagccgac ggcgaaggca gtatgttccc
     7261 aaccggcaat ttggtcgacg aaattgatgt gccgaatata ggtcgtctga aagccacgct
     7321 catcaacgcg ggcattccga ccgttttcct gaacgccgcc gacttgggct acacgggcaa
     7381 agagttgcag gacgacatca acaacgatgc cgccgcgctg gaaaaatttg aaaccatccg
     7441 cgcatatggc gcgctgaaaa tgggtttgat cagcgacgta tccgaagccg ccgcccgcgc
     7501 gcacacgccg aaacccgcct tcgtcgcgcc cgccgccgat tacaccgcct ccagcggcaa
     7561 aaccgtaaac gccgccgaca tcgatttgcc ggtacgcgcc ctgagcatgg gcaaactgca
     7621 ccacgctatg atgggcatcg cctcggtcgc catcgccgcc gccgtgctcg gtacgctggt
     7681 caaccttgcc gcaggcggcg gaacgcgtaa agaagtgcgc ttcgggcatc cgtcaggtac
     7741 gctgcgtgtc ggtgctgccg ccgaatgtca ggacggacaa tggacggccg ccaaagcggt
     7801 catgagccgc agcgcacgcg tgattatgga aggttgggtg cgcgttcccg atgattgttt
     7861 ttgaaatcat gtaggacgca cattgctgtc cgctgtttca gacggcattt gattaaggat
     7921 taccataaag ccgaataacc ttaccgccgt cattcccacg caggcgggaa tccgcagccg
     7981 atattctgtt tcctgatttt tatcagagcc tgcgtgtgag caaatatgga ttcccgcctg
     8041 cgtgggaatg acgctaggaa atacggcata cgctttgccc aaagaggccg tctgaaacac
     8101 actccgccca acgcccatcc tttttcagac ggccccgcac caaaaaaaca accacaaact
     8161 acaaggagaa acatcatgtc cgaccaactc attcttgtcc tgaactgcgg cagttcatcg
     8221 ctcaaaggcg ccgttatcga ccgcaaaagc ggcagcgtcg tcctaagctg cctcggggaa
     8281 cgcctgacta cgcccgaagc cgtcattacc ttcaacaaag acggcaacaa acgccaagtt
     8341 cccctgagcg gccgcaactg ccacgccggc gcggtgggta tgctgttgaa cgaactggaa
     8401 aaacacggac tgcacgaccg catcaaagcc atcggccgcc gcatcgccca cggcggcgaa
     8461 aaatatcacg agtccgtcct catcgaccaa gacatccttg acgaactgaa agcctgcatc
     8521 ccgttcgccc cgctgcacaa ccccgccaac atcagcggca tcctcgccgc gcaggaacac
     8581 tttcccggcc tgcccaacgt cggcgtgatg gacacctcgt tccaccaaac catgccggag
     8641 cgggcctaca cttatgccgt gccgcgcgaa ttgcgcaaaa aatacgcctt ccgccgctac
     8701 ggtttccacg gtaccggtat gcgttacgtc gcccctgaag ccgcacgcat cttgggcaaa
     8761 cctctggaag acatccgcat gattattgcc cacttaggca acggcgcatc cattaccgcc
     8821 gtcaaaaacg gcaaatccgt cgataccggt atgggtttca cgccgatcga aggtttggta
     8881 atgggtacac gttgcggcga caccgatccg ggcgtataca gctatccgac tttccacgca
     8941 gggatggatg ttgcccaagt tgatgaaatg ctgaacaaaa aatcaggttt ccccggtatt
     9001 tccgaacttc ccaacgactg ccgcaccctc gaaatcgccg ccgacgaagg ccgcgaaggc
     9061 gcgcgcctcg ccctcgaagt catgacctac cgcctcgcca aatacatcgc ttcgatggct
     9121 gtggcctgcg gcagtgttga cgcactcgtg ttcaccggcg gtatcggcga aaactcgcgt
     9181 aatatccgtg ccaaaaccgt ttcctatctt gatttcttgg gtctgcacat cgacaccaaa
     9241 gccaatatgg aaaaacgcta cggcaattcg ggcattatca gcccgaccga ttcttctccg
     9301 gctgttttgg tcgtcccgac caatgaagaa ctgatgattg cctgcgacac tgccgaactt
     9361 gccggcatct tgtagccaaa aaagggggcg agtccgcaaa aatgccgtct gaaaggtttt
     9421 cagacggcat tttgtttggc gtttgggcgt acaatacgga aaacatgacg ataaggaaac
     9481 aaactatggc acaatttttc gccgttcatc ccgacaatcc ccaagaacgc ctcatcaagc
     9541 aggcagtcga aatcatcaat caaggcggcg tggtggttta tccgaccgat tcctgttacg
     9601 ccttgggttg caaactcggc gataaggcgg cgatggaacg catactctcc atccgaaaaa
     9661 tcgatttgaa acaccacctg accctgatgt gcgccgattt gagcgagttg ggcacatacg
     9721 ccaaaatcga caacgtacag tttcgtcagc ttaaagccgc cacgcccggg ccttatacct
     9781 ttatcttgca ggcgacgaag gatgcgccgg cgcgcgccct gcacccgaaa cgcaaaacca
     9841 tcgggctgcg tattcccgat aatgccgttg cacaagccct gctggaggag ttgggcgggc
     9901 cgcttttaag ctgcaccctg atgctgcccg aagacggcga accattgacc gacccttatg
     9961 aaatccgcga gcgtttggaa cacgccgtcg atttggtaat tgacggcggc tggtgcggaa
    10021 ccgatccgac taccgtcatc gacatgaccg acggcacgga actggtgcgc cggggtttcg
    10081 gcgatacggc ggtgttcggt ttgtagggaa accgatgccg tctgaagcat cagccgttca
    10141 gacggcatcg cgcgccttgc cggcggcagc ccgaaatgcc ggcgcgtatc gcgcccggtc
    10201 ggaatatccg tttgaaacgg caaacaaaat gccgtccgaa cgcgggtttg ggcggcattt
    10261 tgatgcgtta tcgcaccgca atcgggattt tcgattcata aagcaggtcg taggtcggct
    10321 tgttgagcag gtcttgcagc gtgaaaccgt ccagatacgt gaaaaacgac ttcattgcac
    10381 cgccgagtat gcccgtcagc cggcaggacg gcgtaatcag gcattcgttg ttcgggccca
    10441 tacactcgac cagctgcatc ggttcgaggt ggcggacgac cgcgccgata ttgatgcgtt
    10501 cgggcggcgc ggccagcctc agcccgccgc ctttcccgcg tacgctgtgc aagaacccgc
    10561 ctttgaccag cgcggtaacc actttcatca aatggctttt ggaaatgccg taggtcgagg
    10621 cgatggtggc gatattgacc agcgcgtcgt cgttgacggc ggtgtagatg aggacgcgca
    10681 gcccgtagtc ggtatgttgg gtcagataca tgattttctc ggtatggatc gttattctta
    10741 tcggtacggt ttaagtttca cggaaaatac cttaatggtt gaaaccctgt ccgtcggggc
    10801 ggtagaatgt agcctgtctg cggcggtatg ccgtctgaaa catccgcgct accgtttgat
    10861 aatttgttat tgtaacctaa atttatgaaa ccgttgaaac gacattccgc ccttgtcggg
    10921 ctttcgcgcg aacaccacca ctcgctttcc ctgtgcgtgc gtatgttgcg gacgcccggg
    10981 gcagaccatc gtgccgaact cgagctgcat tttgccgaac tggaaaccca ttttcgcgaa
    11041 gaagaagcca agtttgcccc aatttggcag aatgtcgcgc ctgagttgaa aacccgtttt
    11101 gaaggcgatc acgccaaact gcggcagatg atggcaagcc ccgaatgcgg taacgcggcg
    11161 tggaataccg cttttgccac aaccctgcgc gaccacgcgc gctttgaaga acgcgagctg
    11221 tttcccgccg tcgaaccgtt tttgccggca tgattccgtt ttgcggcaaa tatattaatg
    11281 ataaacaagg aacacacatg aaatttacca aacatcccgt ctgggcaatg gcgttccgcc
    11341 cgttttattc actggcggca ctgtacggcg cattgtccgt attgctgtgg ggtttcggct
    11401 acacgggaac gcacgagctg tccggtttct attggcacgc gcatgagatg atttggggtt
    11461 atgccggtct cgtcgtcatc gccttcctgc tgaccgccgt cgccacttgg acgggacagc
    11521 cgcccacgag gggcggcgtt ctggtcggct tgaccgcctt ttggctggct gcgcggattg
    11581 ccgcctttat cccgggttgg ggtgcggcgg caagcggcat actcggtacg ctgtttttct
    11641 ggtacggcgc ggtgtgcatg gctttgcccg ttatccgttc gcaaaaccgg cgcaactatg
    11701 tcgccgtatt cgcaatattt gtgctgggcg gtacgcatgc ggcgttccac gtccagctgc
    11761 acaacggcaa cctaggcgga ctcttgagcg gattgcagtc gggcctggtt atggtgtcgg
    11821 gctttatcgg cctgattggg atgaggatta tttcgttttt tacgtccaaa cggttgaacg
    11881 tgccgcagat tcccagtccg aaatgggtgg cgcaggcttc gctgtggcta cccatgctga
    11941 ccgccatact gatggcgcac ggcgtgatgc cttggctgtc ggcggctttc gcgtttgcgg
    12001 cgggcgtgat ttttaccgta caggtgtacc gctggtggta taaacccgta ttgaaagaac
    12061 cgatgctgtg gattctgttt gccggctatc tgtttaccgg attggggctg attgcggtcg
    12121 gcgcgtctta tttcaaacct gccttcctca atctgggcgt acatctgatc ggggtcggcg
    12181 gtatcggcgt gctgactttg ggcatgatgg cgcgtaccgc gctcggtcat acgggcaatt
    12241 cgatttatcc gccgcccaaa gccgttcccg ttgcgttttg gctgatgatg gcggcaaccg
    12301 ccgtccgtat ggttgccgta ttttcttccg gcactgccta cacgcacagc atccgcacgt
    12361 cttcggtttt gtttgcactc gcgctgctgg tgtatgcgtg gaaatacatt ccgtggctga
    12421 tccgtccgcg ttcggacggc aggcccggtt gagtaaaacc gccgcagatt tcgggtctgc
    12481 ggcggtttgc ttttcagacg gcatggcggt cagttgccgt ccagccagcg gtcgcgcgtg
    12541 gttttggctt cttcaaaata gcggtacagg gcttcgcggt cgtcggcggt caggatgtct
    12601 gccaaaacgt ccaactgttt gcccaagcct tgaaccagtt gcagcaggct gtctttgttg
    12661 gcaaggcaga tgtccgccca cacggcggga tggccggagg cgatgcgggt gaagtcccga
    12721 aagcccgtgg cggcgaattt cagatattcc tgcccgtcgg ggtggtcgag aatctggtgg
    12781 acataggcga aggcggtcag gtggggcata tgggagacgg cggcgaaaac cgcgtcgtgg
    12841 tgttgcgcgt ccatcgtgaa aatgtccgca ccgaccgcgc gccacaggtt ttctaccaat
    12901 gcgatgccgt ctgaatcttc gccgccgtgg ggcgtgatga tgagttttct gtggcggaac
    12961 agcccgaact gcgcggcttg cgcaccgttt ctgtccgaac cggcaatcgg gtgtgcggcg
    13021 atgcagcggt gcaggcggtc gggcaggcag cggcggaagg cttcgatgac cgaagatttg
    13081 gtgctgccga catcggaaat ccaagtgtgt tccggcaaaa cggggcgcag cgcggttaaa
    13141 acggcgggaa cggtggcgac gggcgtggca atcagtacca agtccgcacc gccgatgctg
    13201 tccgcgtcga tgacgacgga agcccggtta atcacgccgc gttccaatgc acgttcgagg
    13261 ttgtcgcggt cggtgtcgat accggtaacg gtgcggacga gtccctgcct tttgaggtcg
    13321 agaacgaacg aaccgccgat cagccctaca ccgatgaggg caatatggtt caaaatgggc
    13381 atttgtgtaa acggttttcg caaagtgccg ccatggtagc ctatcggcgg aatatgccgc
    13441 aaggtcggca ggaaaaagga gaagaaatgg acaaaatcag agttgccgcc gtgcagatgg
    13501 tgtcgggcgt gtcgccggaa accaacgtcg ccgccatgaa acgcctggtc gcacgggcgg
    13561 cggagcaggg tgcggattgg gtgctgctgc ccgaatattg ggtgctgatg ggcgcaaacg
    13621 ataccggcaa actcgcactt gccgagcctt tgggcggcgg acgctttcag acggcattga
    13681 gcgaaacggc gaaagaatgc ggcgtggtgc tgttcggcgg aaccgtgccg ctgcaaagcc
    13741 ccgaagcggg caaggtcatg aatactttat tggtgtacgg gtgcgacggc gtaaggacgg
    13801 ggctgtacca caaaatgcac ctcttcggtt tttccggttt gggcgaacgc tatgccgaag
    13861 ccgataccat ccgcgcaggg cgggaagtgc cgcacttgtc ggcagaaggc atgccggtgg
    13921 cggcaggtat ttgttacgat gtccgctttc ccgaattttt ccgccgccaa ctgccgtttg
    13981 acgtattgat gctgccggcg gcatttaccc atacgacggg caaggcgcac tgggagctgc
    14041 tgctgcgcgc gcgtgccgtc gaaaaccaat gttacgtcgt ggcggcggca cagggcggtt
    14101 tgcacgaaaa cggacggcgc acgttcggac acagtatgat tgtcgatccg tggggcgacg
    14161 tgttggacgt attacccgaa ggcgaaggca tcgttacggc agacatcgat gccaaccgcc
    14221 tgaacagcgt ccgcaaccgc ctgcccgcct tgaaacaccg ggttttggat gccgtctgaa
    14281 agttcagacg gcatcggtgt cggggaatca gcgggccgta gcaaccgaac cgtcattccc
    14341 gcgcaggcgg gaatccagac ctgtccgcac ggaaacttat cggttaaaag gtttctctag
    14401 attccgcatc ctagattccc gcctgcgcgg gaatgacggg tttcgagatt gcggtgttgt
    14461 cgggaatgac ggttcgggta ttttactgcg cccgccccgc gcccgtaaac ggcgagcgcg
    14521 tcaaaaatgc cgtctgaagg ttcagacggc atcggtgtcg gggaatcaga agcggtagcg
    14581 cacgcccaat gaggcttcgt gggttttgaa gcgggtgttt tccaagcgtc cccagttgtg
    14641 gtagcggtat ccggcgtcca gggtcaggcc gggcgcgacg tctatgccca cgcccgccat
    14701 cgcgccgagg cccacgcggc ggatgctgtc gctttggtga taagggtttt gcgtctgtgg
    14761 attagcatta taagttgtag gtgctccgtc agaagtagtg gggggggcgg taataacatc
    14821 tgttgttttt ttggtcgaat cgatgctgtg tctgacgtgt ccgtagctga cgcgcacgcc
    14881 tgcatagggt ttgaagcggg aaccggtatc gaaatcgtaa acggcggaca agccgagaga
    14941 agaaacggcg tggaacgtac cgttttcctg attttccgtc ttcaggtctt gcgtcagttt
    15001 tttcccgctg ccattgtttt ctttcaccct ttttatgttg acggaatatt tactgttgtt
    15061 ccactttctg taacgggcat aatctgccgc tatcctccag ccgccgaaat cgtagccgac
    15121 cgacaccctg gggtggatgg aatgcgtacg gatgtttctg aaataatcgc ttaccgtgct
    15181 tattttgttc ttgtttggag cggttggttt cggataatcg tgggtaatgt gttcgtaggc
    15241 gtaggctaaa tccgcctgca catacgggcc gcggccgccg tcttcacttg ccgcctgcgc
    15301 tgcggaaggg aagagaagag aagagaagag aagagaagag aaggtttttt tgcgggctgg
    15361 attcattttc ggctccttat tcggtttaac cggttaaaaa aagattttca ctgatgttga
    15421 aaggcggatt atatcgggtt ccgggcggtg tttcaacaca atatggcgga tgaacaaaaa
    15481 ccggtacgtc gttgccccgc cccggcccaa agggaacggt tccccaaggt gatgaagcac
    15541 cgggcggatc ggttccgtac catttgtact gcctgcggcc cgccgccttg tcctgatttt
    15601 tgttaatccg ctataaagac cgtcgggcat ctgcagccgt cattcccgcg cgggcgggag
    15661 tccggacctt ggaacaacag caatattcaa agattatctg aaagtccggg attctggatt
    15721 cccgctttcg cgggaatgac gggattttag gtttctgatt ttggttttct gtttttgagg
    15781 gaatgacggg atgtaggttt tcttaaccct gcgtcctaga ttcccgcttt cgcgggaatg
    15841 acgaaaagtg gcgggaatga cggttcgggc attccttctt gtcctgattt ttgttaatcc
    15901 gctatacttt tgtatgacca tctgacttta ccactcacta tgttttacca aatccttgcc
    15961 ctgattatct ggggcagctc gtttattgcc gccaaatatg tctatggcgg catcgatccc
    16021 gcattgatgg tcggcgtgcg cctgctgatt gccgcgctgc ctgcactgcc cgcctgccgc
    16081 cgtcatgtcg gcaagattcc gcgtgaggaa tggaagccgt tgctgattgt gtcgttcgtc
    16141 aactatgtgc tgaccctgct gcttcagttt gtcgggttga aatacacttc cgccgccagc
    16201 gcatcggtca ttgtcggact cgagccgctg ctgatggtgt ttgccggaca ctttttcttc
    16261 aacgacaaag cgcgtgccta ccactggata tgcggcgcgg cggcatttgc cggtgtcgcg
    16321 ctgctgatgg cgggcggtgc ggaagagggc ggcgaagtcg gctggttcgg ctgcctgctg
    16381 gtgttgttgg cgggcgcggg cttttgtgcc gctatgcgtc cgacgcaaag gctgattgcc
    16441 cgcatcggcg caccggcatt cacatctgtt tccattgccg ccgcatcgtt gatgtgcctg
    16501 ccgttttcgc ttgctttggc gcaaagttat accgtggact ggagcgtcgg gatggtattg
    16561 tcgctgttgt atttgggttt ggggtgcggc tggtacgcct attggctgtg gaacaagggg
    16621 atgagccgtg ttcctgccaa cgcgtcggga ctgttgattt cgctcgaacc cgtcgtcggc
    16681 gtgctgttgg cggttttgat tttgggcgaa catttatcgc ccgtgtccgc cttgggcgtg
    16741 tttgtcgtca tcgccgccac tttcgccgcc ggccggctgt cgcgcaggga cgcgcaaaac
    16801 ggcaatgccg tctgaagcgg tttcgggcgg catatccttc ggttttgccc cgccgtccga
    16861 tatgttagac ttgcgcccgt accgaccgtc gtttgcgacg gtttctttat ttgatttgaa
    16921 cggaaaaacc atgtctccga cccttcctcc gatgagcgga aaactgatgg cggttttgat
    16981 ggcggtactg gtcgcgctga tgccgttttc caccgatgcc tacctgcccg cgattcccga
    17041 aatggcgcag ccgctgaacg cggatatcca ccgtatcgaa tagagtctga gtttgtttat
    17101 gttcggcacg gcgttcgggc aagtggccgg cggcgcggtg tccgacatca aagggcgcaa
    17161 acccgtcgcc ctgaccggtt tgattgtata ttgccttgcc gttgccgcca tcgtatttgc
    17221 ttcgagtacc gaacagctcc ttaacctgcg tgcggtacag gcgttcggcg caggcatggc
    17281 tgtagtcatc gtcggtgcga tggtgcgcga ttattattcc ggacgcaaag ccgcgcagat
    17341 gtttgccctt atcggcatca ttctgatggt tgtgccgctg gccggaccca tggtcggcgc
    17401 attgttgcag ggattgggcg gatggcgggc gattttcgtt ttcttggcgg cgtattcgcc
    17461 ggtgctgccc ggtttggtac agtatttcct gcccaatccc gccgtcggcg gcaaaatcgg
    17521 cagggatgtg ttcgggctgg tggcggggcg gttcaagcgc gtattgaaaa cccgtgccgc
    17581 gatgggttat ctgttttttc aggcattcag cttcggttcg atgttcgcct ttctgaccga
    17641 atcttccttc gtgtaccggc agctctacca cgttacgccg caccggtacg catgggtgtt
    17701 tgcactcaac atcatcacga tgatgttttt cagccgcgtt accgcgtggc ggcttaaaac
    17761 cggcgcgcat ccgcaaagca tcctgctgcg ggggattgtc gtccaatttg ccgccaaccc
    17821 gtcccaactc gccgccgtgc tgtttttcgg gttgcccccg ttttggctgc cggttgcgtg
    17881 cgtgatgttt tccgtcggta cgcagggcct ggtcggtgcg gacacgcagg catgctttat
    17941 gtcttatttc aaagaagagg gcggcagcgc gaacgccgtg tcgggtgtat tccggtcctt
    18001 aatcggcgcg ggcgtgggca tggcggcaac cgtcctgcac gacggttcgg caactgtgat
    18061 ggcggcaact atggcggccc tacctcttgc ggcatcgcgc ttctgtggct ctgctcgcac
    18121 aaggcgtgga aggaaaacga aaaaaagcga atacttgtaa accgatgccg tccgaaaccg
    18181 cttcagacgg catttgatgt tagaatgcac ggcaaattac cgttcaggcg aaattatgtc
    18241 ccaaactatc gacgaactcc tcatcccgca ccgcaacgcc atcgacacca tcgatgccga
    18301 aattctgcgc ctgctcaacg aacgcgcgca acatgcccac gccatcggcg agctgaaagg
    18361 cacgggcgcg gtgtaccgcc ccgaacgcga ggttgccgtg ttgcgccgca ttcaggattt
    18421 gaacaaaggc ccgctgcccg acgaatcggt agcacgcctg tttcgggaag tgatgagcga
    18481 gtgcctcgcc gtcgaacgtc cgctgaccat cgcctatctg gggccgcagg gcacgtttac
    18541 ccaacaggcg gcaatcaagc atttcggaca cgccgcgcat acaatggcgt gtccgaccat
    18601 agacgactgc ttcaaacagg ttgaaacccg tcaggcggat tatctggtcg cgcccgtgga
    18661 aaactcgacc gaaggctcgg tcgggcgcac attggatttg cttgccgtta ccgcgttgca
    18721 ggcgtgcggc gaagtcgttt tgcgcatccg ccacaacctg ttgcgcaaaa acaacggcag
    18781 caccgagggt atcgccaaag tattttcgca cgcgcaggcg ttggcgcagt gcaacgactg
    18841 gttgggcagg cgtctgccca acgccgaacg gattgccgtg tccagcaatg ccgaagccgc
    18901 aaggctggtt gccgaatcgg acgacggtac ggttgccgcc atcgccggac gcacggcggc
    18961 ggaaatttac ggactcgata tggttgccga gtgcatcgaa gacgaaccga acaacaccac
    19021 gcgctttctg gtcatgggac atcacgaaac cggtgcaagc ggcagcgaca aaacctcgct
    19081 ggccgtttcc gcgcccaacc gcgccggcgc ggttgcctcg ctgctgcaac cgctgaccga
    19141 atcgggtatt tccatgacca agtttgagag ccgtccgagc aaatccgttt tgtgggaata
    19201 cctgttcttc atcgacatcg aaggacaccg ccgggacgcg cagattcaga cggcattgga
    19261 acgcttgggc gaacgcgctt cgtttgtcaa agccatcggt tcgtatccga ctgccgtttt
    19321 gtagtcgcgg cagcgttcag acggcatttc aggcattatg tccgaacacc gagtcaacca
    19381 cgaacccgtt tttatgctgg catcttcgcc ttggcgcgaa agcagcctgc gggttgaagc
    19441 attcagccgc cgttacgggc gtgtggcttt gctggcgcgc agcgcgcgca aacggcagag
    19501 cgagctgcgc ggcgtattgg ttccgttcgt ccctgccagc gtgtcgtggt acggcagtca
    19561 ggaactcaaa accctgcacc gcgccgaatg gatgggcgga tggcggcagc cgcagggcag
    19621 ggcgttgttc agcggtctgt atgtgaacga gctggtgttg aaactgaccg cgcgcgaaga
    19681 cccgatgtcc gaactgtacg acgcgttggc aaaagtgatg gaggcagtgt gccgtgaagc
    19741 caaccatatt gccgatttgc gccgcttcga atggaagctg ctcaatgcct tgggcgttgc
    19801 ccccgatttg cacgccgacg gcacgggcgg cgatattttg gcggacaaaa cctaccggct
    19861 gatgcccgaa gaggcggtca tgcccgtatg ccgggacaca ggcgcgcttt cgcacgaagc
    19921 cggcgcaatt gtcgaagggc agagcctgat cgatttgcgc gaaggcagtt tccgcaccgc
    19981 cgaaagcctg caacaggcat tgaaaatcac acggctgcta atcggcacgc tgcttcccga
    20041 aggcttgaaa tcgcggcagg tgttggaaca gataaggcag ttcgaccgca ataccgcgta
    20101 gctgcgcccg caccatgccg tcaaacagga aaacgaagag aaagggaaac attatgcttc
    20161 tgggtgtcaa catcgaccac atcgccaccg tccgcaacgc gcgcggcacg acttatccca
    20221 gccccgtgga ggcggcactg gttgccgaaa cgcacggtgc agacctgatt accatgcacc
    20281 tgcgcgaaga ccgccgccac atcaaagacg cggatgtatt tgccgtcaaa aacgccatcc
    20341 gcacgcgcct gaaccttgaa atggcgttga cggaagaaat gctcgaaaac gcgcttaaag
    20401 tgatgccgga agacgtgtgc atcgtgcctg aaaaacggca ggaaatcacg accgaaggcg
    20461 gtttggacgt attggcgcaa caggaaaaaa tcgccgaatt cgccaaaatc ctgaccgacg
    20521 cgggcatacg cgtgtccttg tttatcgatg ccgacgacag gcaaatccaa gccgcctatg
    20581 atgtcggcgc gcccgttgtc gagctgcaca ccggcgcata tgccgacgca cacagccacg
    20641 ccgaacaaat caggcagttc gagcgtctgc aaaacggcgc gcatttcgcc ggcgatttgg
    20701 gcttggtcgt caacgccgga cacggactga ccatacacaa cgttaccccc gtcgcccaaa
    20761 tcctcgccat ccgcgagctg aacatcgggc attcgctgat ttcgcaggca cttttcctcg
    20821 gattgcccga ggccgtgcgc cagatgaagg aggcgatgtt cagggcaagg ctgctgccgt
    20881 aagggcaggc aaaccgtttc agacggcatt tcacgaaaaa ggagcgcaaa tatgatttac
    20941 ggcatcggta cagacatcgt ttccctcaag cgcatcatcc gcttaaacaa aaaattcgga
    21001 caggcgtttg cagggcgcat actcactccc gaagagctgc ttgaatttcc gcaggcgggc
    21061 aaacccgtca actaccttgc caaacgcttt gccgccaaag aagccttcgc caaagccgtc
    21121 ggcacgggca tacgaggcgc ggtttccttc cgcaacatcg gcatcgggca cgacgcattg
    21181 ggcaagcccg aatttttcta cggccccgcc ctgtccgaat ggctggaaga acaaggcatc
    21241 agccgcgtca gcctgagtat ggcggacgaa ggcgataccg tgttggcgtt tgccgttgcc
    21301 gaaaaataat gccgtctgaa attcggcaaa cccgttgacg gcattgccct tccctcattt
    21361 gcattccgac cgaccaaccg catacccgcc atgatccaag atacccgccc ccttatccgc
    21421 gtcgttgccg gcatcctgct cgattcagac ggcaattacc tgctcggctc gcgccccgaa
    21481 ggcaagccct atgccggata ttgggaattt gccggcggca aggtcgaggc gggcgaaacc
    21541 gacttccaag ccctgcaacg cgagtttgga gaagaactcg gcatccgcat cctcgccgcc
    21601 acgccttggc tgaccaaaat ccattcctac gaacacgccc gcgtctgcct gaaattctta
    21661 tgggtaaacc ccgatcaatg ggagggcgga ccgcaatcgc gcgaagggca ggaatggtct
    21721 tggcagaagg cgggtgattt taccgttgcc cccatgctgc ccgccaacgg tgcgcttttg
    21781 cgttcgctgt ccgtcccgcg ccgtttgtac ggcagcctga aaacaggttt gtacggcgaa
    21841 aacagtatgg gcgcgtaccg cgtcctgcct ttgggttcgg cagggggaag cggtgcgaac
    21901 gttttgatgg aggcggcaca atggcaggac aggtccgaac acgccggcag cgtgtggatg
    21961 atggtgcaga cccgcgaaca atggcggcag gcgcaggaaa agggcgcgga tgtggtcgtg
    22021 tggcgcgtgt gcgatgatgt tcaggcacaa gaggcggcag aagccctgcg gcagggcgta
    22081 tccgtgccgc tcgtacttgc agcaaacgga cagacggttg cacgttatgg aaaactatgg
    22141 ctcggattgg gggcgcacgc ggtggtaagg gatgaaacaa tagggaagaa tcatgaataa
    22201 aaaccgcaaa ttactgcttg ccgcactgct gctgactgcc tttgccgcct tcaagctcgt
    22261 tttgttgcaa tggtggcagg cgcagcagcc gcagcagccg caagccgtgg cggcgcaatg
    22321 cgatttgacc gagggttgca cgctgccgga cggaagccgt gtccgcgccg ccgccgtttc
    22381 aaccaaaaaa ccgtttgata tttatatcga acacgcgccc gccggcacgg aacaggtcag
    22441 catcagcttc agtatgaaaa atatggatat gggtttcaac cgctatatgt tcgagcggca
    22501 accgtcgggg aattggcagg cagcacgcat ccgcctgccc gtctgtgtcg aaggcaggcg
    22561 cgattttacg gcggacatta caatcggcag ccggacattt cagacggcat ttaccgccga
    22621 ataaaccttt caatccgcca ttgccggaac atccgtccgg aaaggacacg ctatgaatac
    22681 tttatataca cttttcgcca cctgcccgcg cggcttggaa accgttttat ctcaagaact
    22741 cggaagcctc ggctgtaccg aggttcgggc gtttgacggc ggcgtttcct gccggggcgg
    22801 attggaacag gcctacgccg ccaacctgca ctcgcgtacc gccggccgca tcctgctgcg
    22861 cctgaccaaa ggcacatacc gcaccgagcg cgacatctac aaacttgcca aaaacatcaa
    22921 ctggttcaac tggtttacct tgcagcagac gttcaaagtc aaaatcgagg caaaacgcgc
    22981 caacgtcaaa agcctccaat ttgtcggcct gaccgtcaaa gatgccgtct gcgacgcttt
    23041 ccgcgacatt tacgacgcac gtccgagcgt ggacaaagcc gcgcccgatg tccgcatcca
    23101 cgcctttttg gacgaacgca atgtcgaaat cttcatcgac acttcgggcg aagccctgtt
    23161 caaacgcggc taccgcctgg ataccggcga agccccgctg cgcgaaaacc ttgccgccgg
    23221 gctgctgctc tcggcaggct acgacggcac gcagccgttt caagacccgt tttgcggcag
    23281 cggcacgatt gctatcgaag ccgcttggat tgccgccggc cgcgcgccgg gtatgatgcg
    23341 ccgcttcggt tttgaaaaac tgcaaaattt cgataaaacg ctgtgggcgg atttgcgccg
    23401 ccgcgccgaa gcgcaaaccc gccccgtccg cgccccgatt gcaggcagcg acaacggccg
    23461 ccgcatcgtt cagacggcat tggacaacgc acacaatgcc ggagcggacg acatcgtttc
    23521 cttcagcgtt gccggcgcgc agtccgtccg tccgaacggc gaaaacggca tcatggtgtc
    23581 caatccgccc tacggcgtgc gccttgagga agtccgcgct ttgcaggcac tttatccgca
    23641 gttggggacg tggttgaaaa aacactatgc cggctggcgg gtcggcatgt ttaccggcga
    23701 cagggaaatg cccaaattca tgcgcctgct gcccaagcgg aaaatcccgc tttataacgg
    23761 caacctcgac tgccgcctgt tcctgatcga tatggtgcag ggatcgaacc gttgaggaaa
    23821 gtgtacaaaa atgccgtctg aaaaatgttc agacggcttt ttaaatggag aaatttcgga
    23881 aaatatccac atcaggctgg ggaccgtact tatttacggt attttcgtat gccgaaataa
    23941 aatatttctt gaataaaccg taatcgccgg tttcgtaata ggctacgaca gcctcggcat
    24001 aggcgggata actgtcgggg gagaatacgc aaggaaaaaa accggagcgc atcagcgaca
    24061 aggtcataca gtttctggca gtacgtttat tgcagtcctt aaaatatcgg agatacgcca
    24121 aattattatg gagataaacg gcgcggtcga aaggattttc tattttgggg gcttcttgaa
    24181 gcaaccattt caattccgta tccaaacttt gcgggttgga taaaggggtg tagtctgtcc
    24241 cgcttatagt aacgctgtcg cggcggacta cgccgccgga gcctttttcc agtaagtttt
    24301 ccgaaatcag gctgtgggtg gtttttaaga aatccaacca gtcaaacggc ttggggctgt
    24361 ccaaaccgga cagcaggtgc cggtaacttt ccctcaggtt gattaacatt acggcatccg
    24421 aatataactt cccgcctgcg gtttgcccga gtttaagcaa tgcctgcgta tcgtattgat
    24481 tataagtgtt tccttccaat ttggcaggac tgtacacaaa atcgataccg atttcttcaa
    24541 tattacgcac ggagtccgtt aaaacagata aaggaagccg atcggacaat tcggtcaggt
    24601 attcttgttc gccggctgta aaaatggggc ggatatttaa aaaatcccgt tggtatctca
    24661 atttatccat acctttcatc ataaaaacgc ggtttggggc ggaagtaggt ttatgcctgc
    24721 cttcatccga caactatatt ttgaaacacc gccttttcaa tcaaccccgc ttcaatacgg
    24781 atgtattgat gtagcgttgg acacccgagg caatggattg ggcgcactgc cgacggaagg
    24841 attcgctgcc cagcagcttc tcttcggcag gattggacag gaaggcggtt tcgaccagga
    24901 tagacggcat atcgggtgcg cgcaatacgg cgaaattggc ttcgtccacc ctgcctttgt
    24961 gcagatggtt gagcctgccc aattcttcaa gcaccagttt gccgagtttg cggctgtcgc
    25021 gcagtgtggc ggtttgcgtc atgtcgagca gggcggtatc gacgttgcgg ttgccgctgg
    25081 tcggtacgcc gccgaccgcg tcggcattat tttgggtttg ttccaagaat ttggcggcag
    25141 agctggtcgc gcctttggtg ttcagcatat aaacccccgt tccgcgcgcg gaggggctgg
    25201 tgaaagcgtc ggcgtggatg gagacgaata cgtccgcccg ccgtgcgcgc cctttggcga
    25261 cacgcacgcc caatgggatg aacacgtctt cgttgcgcgt cataaagacg ttgtaaccca
    25321 aggcttccaa ttgttttttg gtttcgcggg cgatggagag gacgacgtgt ttttcctgca
    25381 aaccgcccgg gctgacggcg ccggggtctt caccgccgtg tcccggatcg agcatgatga
    25441 cgggtctgcg cccgtttttg ccccgcccgg gtcggggcgt ggtgttttgg gcgaggtcgg
    25501 cttccggaga gccgcgcagg gttttgttca ggctgccgtt gagcagcgcc atcatcggat
    25561 cgtcggcatc catcccgtgc ggatagaggt cgacgacgag gcggtcctta aagccgccga
    25621 cgggcggaag cgcgaagact tgtgcgtggg tgggctgttt caggtcgatg acgaggcgga
    25681 cggtggtcgg cgtgttctga cccgcgcgta tgctgcggat aaaggggtcg tccgccataa
    25741 ctttttggga aagcccgtgc aatacggtat tgatgtttgc gttttgtata tcgacgacca
    25801 acctgcccgg gttgtcgagc gcgaagtgct ggtatttgag cgcggcggtg ctttccagcg
    25861 tcaggcgggt gtaggtgtgc gacggccata tccgtgcggc ggtaaactgc ggggcgcgta
    25921 ccgttttggc aacggcggat gcgatggggc tcagggcgaa cagtgtgccg gcggtgcggc
    25981 ggatgatttg tcttcgtgtc agtttggtca tagcggcagg ctttcgcgtc ctcgttcggt
    26041 atgggcggtc agcaggcatt ttctgccgcc gccgccgtgt gtcaatgttg cggtgatgtc
    26101 ggcaggcggg gtaaattcgc ctccctgttg cggccattcg atcaggcaga cgctgtttgc
    26161 ggcaaacagc tcgtcaagcc ccgcgtcttc ccattcttcg gggaacgaga agcggtagag
    26221 gtcgaaatgg tgcagggcga agcgttccag cggataagat tcgacgatgg cgtaggtcgg
    26281 gcttttgact gcgccctggt gacccaatcc gcgcaggatg ccgcgcgtca gcgtggtttt
    26341 gcccgcaccc aaatcccctt cgaggtaaat gaccagcggt gcgtttaaac gggaagacca
    26401 cgccgcgccc aaatcgagtg tggcggcttc gtcggcaagg aatcggggaa cgggggaaaa
    26461 atcagacata ggggctttac aacttttatg tggcggatcg gaggggcagg cggtcggcaa
    26521 accgtgcgcc cggcggcggc attgccgtac attataacag ccaaatacgc atcctgcttt
    26581 cagacggcat ggctgtcaag aaaaagcggc gcgtgtacaa tatgcggatt gtatgtttag
    26641 gacggattgg aaaaaggatg gaaaatatcg gcaggcagcg gcccatcggc gtttttgact
    26701 cgggaatcgg cggtttgacc aatgtgcgcg cgctgatgga acggctgccg atggagaaca
    26761 tcatttattt cggcgacacg gcgcgcgtgc cttacgggac gaaatccaag gcgaccatcg
    26821 aaaatttctc gatgcagatt gtcgattttt tattgggaca cgatgtcaag gcgatggtta
    26881 tcgcgtgcaa cacgattgcg gcggttgcgg ggcggaaaat ccgtcaaaag acgggcaata
    26941 tgcccgtttt ggacgtgatt tccgccggcg ccaaagccgc gctggcaacg acgcgcaaca
    27001 ataaaatcgg catcatcgcc accaatacga cagtcaacag caatgcttat gcgcgcgcca
    27061 tccacaggga caaccccgac acgctcgtcc gcacgcaggc cgcgccgctg ctcgtccctt
    27121 tggtggagga aggttggttg gaacacgaag ttacccgcct gaccgtatgc gaatacctca
    27181 aaccattgct tgcagacggc atcgatacgc tggtgttggg ctgcacgcac tttcccttgc
    27241 tcaagccctt aatcggcagg gaggcgcaca atgtcgcgct ggtcgattcc gcgattacga
    27301 cggccgaaga aaccgcacgc gtccttgcac aggaaggatt gctcgatacc ggcaacaaca
    27361 atcccgacta ccgtttttac gtcagcgata ttcctttgaa attcagaacc atcggcgagc
    27421 gttttctggg caggacgatg gagcagattg aaatggtgtc tttgggttaa aacgataacg
    27481 gaaagctgcc cgagattaca gagacctaaa atcccgtcat tcccgcgaaa gtgggaatct
    27541 agacctgtcg gtgcggaaac ttgtcggata aaacggtttc tttagatttt acgttctaga
    27601 ttcccgcttt cgcgggaatg acgggatgca ggtttctgtg cggatgtatt cggattccct
    27661 cctgcgcggg aatgacggga tttttaaatg tccgaatgcc gcaaatgccg cctgaaaggc
    27721 ttcagacggc attttttaca caattcccac cgtttcccat catccccgac aataccgtaa
    27781 tcttgaaatc cgtcattccc gcgcaggcgg gaatccggac cgttcggttt cggttttttt
    27841 tggctgtgtt ttaacgatgt gttgatattt aattttagaa aggtagctat ttaatagtta
    27901 ccttttctta tttaaaaata gctttctcaa attccattaa cgcctcaata cgatatgcag
    27961 aggctctatc gaaattaagt ttcaacattt tgtttattaa acattttatt ttagccattt
    28021 ttcaatatac cccccaaata tacccctaat ttgcacaagt caaaatttta ggcaggggtt
    28081 ttgttgctcc catgatgcgc gggcggatgc cgacttttcg cggggaaaat acaaggggta
    28141 ccggttcggg tgtcaaaatc cctgtttcgt gttagtcatg tagggatgaa gagggggtta
    28201 gaatgaagta aagctgttgc cctctccccg caatagttcc attaggcgcg gatgaatgaa
    28261 tagtttgtcc ctgccgatgg cgatttcttg cagcacacct atgcctgaaa gctctttcag
    28321 gtacttagag gccgtctgcc gtttggctat ccctgccgct tctaggttgg caatgcgtgt
    28381 atatggctgc tcaaacagaa gatttaccag ttcgtgcgtg tagattcctt gtgcgtgtgt
    28441 ccgtatgtgt tgacgtgtct gctcgaacag gcagcgtatc gcatctattt tcgataccgt
    28501 ccaatcggcg gtgtcggcta cgccgtctaa gatgtagatt atccagcttt cccaatcctg
    28561 ccgttcggtt acgcctaaaa gcaggcggta atagtccgcc ctgttttcga tgatgtagcg
    28621 gctcaaatac aaaataggca aatccaaaag ccctttttca atcaatagca ggctgttcaa
    28681 tatgcgtccc gtccgcccgt tgccgtccgt aaacgggtgg atggcttcaa attggtaatg
    28741 tgccgccgcc atgatgacaa gcgggtctaa atcgccgctt tcgtgaataa accgctccca
    28801 atttgccagc ttgccgcgta tggtttcttc tccttcgggc ggggtataga caacatttcc
    28861 gctgttacct ccttttaggg ctgtgccgcc tgttttgcgg atggccgttt cgtaggggtg
    28921 cttgatggcg ttgcagacca tgatggcggt ttgtgtgcat aaagggcggc tcgccagtga
    28981 ttcatagcct gcaagcaggg cggtgcggta ttgcagggct tctttcgtgg cagggtcttg
    29041 ccgttccgta tccatttgca gggattgaaa cagcttgtcc gtggtggtta cgatgttttc
    29101 aatttccgaa cttgcacggg cttccataac aggaagggtg ttaatcagca tggcttgatt
    29161 cggtatcaat tctgccgcct gctttaaacg ggcaagggat gcacgggcgg ctatacaacg
    29221 tttcaggatg gttttgcttt caatatcctg ttttggcggc aggggtggta aatcgttata
    29281 gggaatatcg ggtttccagt tgctcatgtt taaaatttcg gaaaatttaa agatgtttcc
    29341 agtatatgtt tacgccgtgt atatatcaag gatatatgtt tagaaatttg gcttttgtaa
    29401 atatatgggc ggtaaaaccg cccgcaaaag tcaatttgca tggggttaat tcaaaatccg
    29461 cccttcatct gcccgctccc ctaaaaaaac cgtatatata tataactgtc cgcattctat
    29521 cgctccggcg acgatacc
//
LOCUS       DAXGCP010000015        29405 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.015, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000015 DAXGCP010000000
VERSION     DAXGCP010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29405
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.015"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(30..593)
                     /gene="orn"
                     /locus_tag="ACFJCW_000595"
     CDS             complement(30..593)
                     /gene="orn"
                     /locus_tag="ACFJCW_000595"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HFC4150814.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAIHQSDDLLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPIAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPKAEAQ"
     gene            complement(611..1498)
                     /gene="prmA"
                     /locus_tag="ACFJCW_000596"
     CDS             complement(611..1498)
                     /gene="prmA"
                     /locus_tag="ACFJCW_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HFC4150815.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDACAGTQNEQA
                     IFGEPGMPTEQIWQQSKVIALFGEHDEAAAVIDAAAQECGLKDLAYTGETIEDQDWVR
                     LTQSQFDPIRISDRLWITPSWHEAPEGCAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRSGRDNAEQNNVDAQFFLP
                     DSLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETDEGWARLNGVKR"
     gene            complement(1602..2963)
                     /gene="accC"
                     /locus_tag="ACFJCW_000597"
     CDS             complement(1602..2963)
                     /gene="accC"
                     /locus_tag="ACFJCW_000597"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HFC4150816.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKGSLHVKL
                     ADESVCIGPAASAQSYLNIPAIIAAAEVTFADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDDAEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVLADE
                     HGNAVYLAERDCSLQRRHQKVIEEAPAPFIDEEARKKIGKACTDACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIASGLPLQYKQKDIKIEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQEGGVSIHYLEHWLEARKTK
                     QDK"
     gene            complement(3077..3538)
                     /gene="accB"
                     /locus_tag="ACFJCW_000598"
     CDS             complement(3077..3538)
                     /gene="accB"
                     /locus_tag="ACFJCW_000598"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HFC4150817.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAAAPVY
                     AAPVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAAFVEV
                     GQQVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(3520..3777)
                     /locus_tag="ACFJCW_000599"
     CDS             complement(3520..3777)
                     /locus_tag="ACFJCW_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HFC4150818.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENEHNFTVVSHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            3894..4934
                     /gene="queA"
                     /locus_tag="ACFJCW_000600"
     CDS             3894..4934
                     /gene="queA"
                     /locus_tag="ACFJCW_000600"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HFC4150819.1"
                     /translation="MDISDFDFTLPEHLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVDKIE
                     EHKMHSEWFEVPSETVAAVEAAKARGNKAWAVGTTSMRALESAARATGYLKDGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVGAFSGMGHIRAVYRHAIEREYRFFSYGD
                     AMVLGRNEGGGL"
     gene            complement(5135..8350)
                     /gene="carB"
                     /locus_tag="ACFJCW_000601"
     CDS             complement(5135..8350)
                     /gene="carB"
                     /locus_tag="ACFJCW_000601"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HFC4150820.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKADNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGRTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSEDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLMKEEKSVSDGQLQDLDYAALRRLKRKGFSDKRLAQLLNVSEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEQLQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQAINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDYLGVYSVQELHGRLKNRN"
     gene            complement(8361..8894)
                     /locus_tag="ACFJCW_000602"
     CDS             complement(8361..8894)
                     /locus_tag="ACFJCW_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150821.1"
                     /translation="MFSDIYLNPKNYFGIEKRLPFKAFWDNGGQCYLDLKVVDGKIIA
                     LCGQLINYTNTSIVNAAEEVYRSIIDYLISNEILIVRTKFSFKNIFSTNEKKYKEIEK
                     EINKFLYKNMDWYLFFNNDITLDPYTGNDLIWHVQIDPNDGGAQFLETYQSWEKLQQK
                     YPNITFSYDKNDLILTK"
     gene            complement(9896..10285)
                     /locus_tag="ACFJCW_000603"
     CDS             complement(9896..10285)
                     /locus_tag="ACFJCW_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HFC4150822.1"
                     /translation="MNPPEKLLTAENPALRQRAKAMRQEMSEAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHAEQAVYDHARTVYLNSLGFTVLRFWN
                     HEILQQTNDVLAEILRVLQELEKQPAR"
     gene            complement(10448..10827)
                     /locus_tag="ACFJCW_000604"
                     /pseudo
     CDS             complement(10448..10827)
                     /locus_tag="ACFJCW_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(10881..12014)
                     /gene="carA"
                     /locus_tag="ACFJCW_000605"
     CDS             complement(10881..12014)
                     /gene="carA"
                     /locus_tag="ACFJCW_000605"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HFC4150823.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSASGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNETVAIADIDTRRLTMLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWELGKGFVTPDKQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAEDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAADADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKQA"
     gene            complement(13012..16162)
                     /gene="pilC"
                     /locus_tag="ACFJCW_000606"
                     /pseudo
     CDS             complement(13012..16162)
                     /gene="pilC"
                     /locus_tag="ACFJCW_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690520.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
     gene            16304..16669
                     /locus_tag="ACFJCW_000607"
     CDS             16304..16669
                     /locus_tag="ACFJCW_000607"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150824.1"
                     /translation="MLRGIPAAAGAPQTAGLGKPPDPAPAGLPVGKPLWPDAMYRVAA
                     SFYPCALIHGTAVFGNPQPFARPAIAACAAMAGRGGGIFQVAATFPNNLTAQIQALRL
                     VALSLALSHRERGRVGCWG"
     gene            complement(16995..18074)
                     /gene="apbC"
                     /locus_tag="ACFJCW_000608"
     CDS             complement(16995..18074)
                     /gene="apbC"
                     /locus_tag="ACFJCW_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HFC4150825.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVGQRSDGIHIALHF
                     GFPVAHIAAALADAVQETLMPETGDTHIHLSIDTEIGTHKVRPGVTTIKGVKNIIAVA
                     SGKGGVGKSTATANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTGQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPARLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            18293..18368
                     /locus_tag="ACFJCW_000609"
     tRNA            18293..18368
                     /locus_tag="ACFJCW_000609"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:18326..18328,aa:Lys,seq:ttt)
     gene            18448..18957
                     /locus_tag="ACFJCW_000610"
     CDS             18448..18957
                     /locus_tag="ACFJCW_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HFC4150826.1"
                     /translation="MKKKLLSGIKFAVRTALVFLLVSLFLDWVRKPDEPAGAAGRPLT
                     LLSGQRLTLGQFSRDRTVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVSDEDGGLARSWRIAATPAVVLVKNGKMVRYTTGISSYWGLRA
                     RIFQADFFG"
     gene            19298..19738
                     /gene="nadR"
                     /locus_tag="ACFJCW_000611"
     CDS             19298..19738
                     /gene="nadR"
                     /locus_tag="ACFJCW_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HFC4150827.1"
                     /translation="MPTQSKHASINIGLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVYLKLTSEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            19853..20353
                     /gene="hpaC"
                     /locus_tag="ACFJCW_000612"
     CDS             19853..20353
                     /gene="hpaC"
                     /locus_tag="ACFJCW_000612"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HFC4150828.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINMLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRPLD"
     gene            20369..21064
                     /gene="murU"
                     /locus_tag="ACFJCW_000613"
     CDS             20369..21064
                     /gene="murU"
                     /locus_tag="ACFJCW_000613"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HFC4150829.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIENALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGGQPF
                     LVANGDVLTDIDFTAAFQTASSLPGHISAHLWLVGNPPHNPDGDFSLLPDGSVRPEVS
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLLNEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAAAWK"
     gene            complement(21098..21510)
                     /locus_tag="ACFJCW_000614"
                     /pseudo
     CDS             complement(21098..21510)
                     /locus_tag="ACFJCW_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
     gene            21703..23379
                     /locus_tag="ACFJCW_000615"
     CDS             21703..23379
                     /locus_tag="ACFJCW_000615"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HFC4150830.1"
                     /translation="MSFKTDAETAQSSTMRPIGEIAAKLGLNVDNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDSVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RFGNILVAYAKDGSPVYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLAGLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLEALAKGLPNLLKHISNLKNVFGLPVVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLARKVVNAIDNQPNNFGFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RITVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            23493..24584
                     /gene="ychF"
                     /locus_tag="ACFJCW_000616"
     CDS             23493..24584
                     /gene="ychF"
                     /locus_tag="ACFJCW_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HFC4150831.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNRFLANIRETDAIVN
                     VVRCFDDDNIVHVSGKVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERALLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LDRLKELAAKENAPVVAVCAAMESEIAELEDGEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVIAYDDFVSLGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            24858..26732
                     /locus_tag="ACFJCW_000617"
     CDS             24858..26732
                     /locus_tag="ACFJCW_000617"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HFC4150832.1"
                     /translation="MSQALPYRPDIDTLRAAAVLSVIVFHIEKDWLPGGFLGVDIFFV
                     ISGFLMTAILLREMSGGRFFLKTFYIRRIKRILPAFFAVLAATLAGGFFLFTKDDFFL
                     LWKSALTALGFASNLYFARGKDYFDPAQEEKPLLHIWSLSVEEQFYFVFPILLLLVAR
                     KSLRVQFGFLAALCALSLAASFMPSALDKYYLPHLRACEMLVGSLTAVRMRYRQQRNP
                     AVGKRYAAVGALFSACILSACLFAYSEQTAYFPGPAALIPCLAVAALIYFNHYEHPLK
                     KFFQWKITVAAGLISYSLYLWHWPILAFMRYIGPDNLPPYSPAAAIVLTLAFSLISYH
                     CIEKPFKKWKGSFAQSVLWIYALPMLVLGAGSFFAMRLPFMAQYDRLGLTRSNTSCHN
                     NTGKQCLWGDTEKQPELLVLGDSHADHYKTFFDAVGKKEKWSATMVSADACAYVEGYA
                     SRVFQNWAACRAVYRYAEEHLPRYPKVVLAMRWGSQMPENSRSLAYDAGFFQKFDRML
                     HKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGCRQTLRPDDESTLKANARIRELA
                     AKYPNVYIIDAAAYIPADFQIGGLPVYSDKDHINPYGGTELAKRFSEKQRFLDTRHNH
                     "
     gene            26794..28089
                     /gene="tyrS"
                     /locus_tag="ACFJCW_000618"
     CDS             26794..28089
                     /gene="tyrS"
                     /locus_tag="ACFJCW_000618"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HFC4150833.1"
                     /translation="MSVIQDLQSRGLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVGSIR
                     SQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIGVVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSRLTES
                     DFEQLALDGLPAFEVSDGINAVEALVKTGLAASNKEARGFVNAKAVLLNGKPAEANNP
                     NHAAERPDDAYLLIGEYKRFGKYTILRRGKRNHALLVWK"
     gene            complement(28757..>29405)
                     /locus_tag="ACFJCW_000619"
     CDS             complement(28757..>29405)
                     /locus_tag="ACFJCW_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4150834.1"
                     /translation="GTKKGKKISTVSDYFRNIRTHSIHPRVSVGYDFGGWRIAADYAR
                     YRKWNNNKYSVNTKEVLRNDGTSSSGRYLNIQTRKTEHQENGTFHAASSLGLSTIYDF
                     DTGSRFKPYIGARVAYGHVRHSIDSTKKTTGFLTTAGARGAAPTVYSPYKNTQDAHQE
                     SNSIRRVGLGVIAGVGFDITPNLTLDAGYRYHNWGRLENTRFKTHEASLGVRYRF"
BASE COUNT         6171 a         7781 c         8279 g         7174 t
ORIGIN      
        1 atagcgtttc agacggcatt gtttgtttct tattgcgctt cggctttcgg ggcggaaatc
       61 aggaagtgtt cgcggtagtg gcgcatttct tcgatgctct ccaaaatgtc gtccaatgcc
      121 ttgtgcgaac cgcgtttgac gacgcttttg gcaatgggcg gattccagcg tttggcgagt
      181 tctttcagcg tggaaacgtc gaggttgcgg tagtggaagt agttttccag tttcggcata
      241 tatttgacca taaaacgccg gtcttggtgg atggagttgc cgcacatcgg tgtggcgcgt
      301 ccgggtatcc attccgacat aaagtccagc agtttctgtt cgacttcggc ttcggtatgc
      361 gacgattcgc gcacgcgctg cgtcagcccc gtcctgccgt gtgtggcggt gttccactcg
      421 tccatattgt cgagcagatc gtcgctttgg tggatggcgt aaacttcgga ttgcgccaac
      481 acattcaaat ccgagtcggt aataatcatc gcgacttcga taatgcggtc ggtttcggga
      541 ttcagccccg tcatttccat atcgagccag cagaggttgt ttttgtcctg cacggtgttt
      601 cctttccgtt tcagcgtttt acgccgttca agcgcgccca gccttcgtca gtttccgccg
      661 ggtcgagatc gaaccattgg ctgtaaatgc cgccgagttc ttcggcctgt tcatccaaca
      721 aaccggacaa cacgatgcgt ccgccctgtt tggtgcgggc tgcaagcatt tcgccgagca
      781 tacgcaaagg gttggcgagg atgttggcga caactacgtc gaattgccct tgaggcagac
      841 tgtcgggcag gaagaattgt gcatcgacgt tgttctgttc ggcgttgtcc ctgccggagc
      901 ggacggcctg ttcgtcaata tccacgccga cggcggaacc tgcaccgagt ttgagggcgg
      961 cgatggtcag gatgcccgaa ccgcagccgt agtcgaggac gctttcgccg tttttgagtt
     1021 gcgtatccag ccatttgagg cagaggcgcg tggtcgggtg gctgccggtg ccgaaggcga
     1081 gtccgggatc gaggcggagg ttgacggcgc agccttcggg ggcttcgtgc caagaggggg
     1141 taatccacag gcggtcggaa attcggatgg ggtcgaattg cgattgcgtg aggcgcaccc
     1201 agtcttggtc ttcgatggtt tcgccggtgt atgccaagtc ttttaacccg cattcttgtg
     1261 cggcggcatc gatgacggcg gcggcttcgt cgtgttcgcc gaacagggcg atgactttgc
     1321 tctgctgcca gatttgttcg gtgggcatac cgggttcgcc gaaaatcgcc tgttcgtttt
     1381 gcgtgccggc gcaggcatct tcgatggcgg cggagagtgc accgtgttcc atcagcgcgt
     1441 cggcgaggcg ttcggcgacg gcatcgttga cgttgacggt gatttgttgg tagggcataa
     1501 cgggctttct tggaaatatc gaaatcggtt tcagacggcg gggcaaggga aatgccgtct
     1561 gaacgcggaa gggcggcttc agacggcata tcggcggcgg cttatttgtc ctgtttggtt
     1621 ttgcgcgctt ccagccagtg ctccaggtaa tggatgctca ctccgccttc ttggaaaccc
     1681 gcatcggcga acaggtcgcg gtgcaacggc gtattggttt tgatgccggt taccgccagc
     1741 tcggcgagtg cgacgcgcat tttcgccatt gcctgttcac gcgttttgcc gtgtacgcag
     1801 attttgccga tcaggctgtc gtagtacggc gggatgcggt agccttggta gatgtggctg
     1861 tccacgcgga tgccgaagcc gccgggcagg tggcagcttt caatcgggcc cgggctgggg
     1921 atgaagttgt acgggtcttc ggcattgatg cggcactcga aggcgtggcc ttcgattttg
     1981 atgtctttct gtttgtattg cagcggcagg ccggatgcga tgcggagttg ctcttggacg
     2041 atgtccacgc cggtgatgag ttcggtaacc ggatgctcga cctgaacgcg cgtgttcatc
     2101 tcgataaaga aaaattcgcc gtcttcgtat aaaaattcaa acgtgcccgc gccccggtag
     2161 ccgatgcgtt tgcacgcgtc ggtacaggct ttgccgattt ttttgcgtgc ctcttcatcg
     2221 ataaacgggg cgggtgcttc ctcgatgact ttctggtggc ggcgttgcag cgaacagtcg
     2281 cgctcggcaa gatagacggc gttgccgtgt tcgtcggcaa gcacttggat ttcgacgtgg
     2341 cgcgggcgtt gcaggtagcg ttccatataa accatcgggt tgccgaacgc cgcgcccgct
     2401 tcagccttgg tcatttcgac agactggagg aggtcttctt ttttctcgac cacgcgcata
     2461 ccgcgcccgc cgccgccgcc cgatgctttg ataatcacgg gataaccgac tttgtcggcg
     2521 attttgagga tttcggcatc atcgtcgggc aatgcgccgt cagagccggg gacgcagggc
     2581 acgcctgccg ctatcatcgc gtgtttggcg gagactttgt cgcccatcag gcggatggtg
     2641 tcgggtttcg ggccgatgaa ggtaaagccg gactgttcga cctgttcggc gaaatcggcg
     2701 ttttcggcaa ggaagccgta gcccgggtgg acagcgtccg cgaaggttac ttcggcggcg
     2761 gcaatgatgg cgggaatgtt cagataactt tgcgcagaag cggcaggacc gatgcacacg
     2821 gattcgtcgg cgagtttgac gtgcaggctg cctttgtcgg cttcggaatg cacggcaacg
     2881 gtggcaatgc ccatttcgcg gcaggcacgg agtacgcgca aggcgatttc gccccggttg
     2941 gcgattaaaa cttttttcag catgatgacc tttcctgcgg ttccggcaac ccgtccgtaa
     3001 aaaaagggtg cgggaacgct gaagggggga aagcatttca gacggcatcg gaagtttatg
     3061 ccgtctgaaa acaggattat ccgatgatga agagcggttc gccgaattcg acgggcgtac
     3121 cgttttcgac cagaatttct ttgaccgtgc cggatttttc ggcttcgatt tcgttcatca
     3181 gcttcatcgc ttcgatgatg cacagcgtgt cgccggcttt gacctgttga ccgacttcga
     3241 caaatgcggc ggcattcggg ccgggcgcgc ggtagaacgt gccgaccata ggcgattttt
     3301 gagcgtcgga caaatcgcgg gcggccggcg cggcggcggg cgcggatgcc gcaacgggtg
     3361 cggcggccgg cgttacggcc ggcgcggcgg caggtacggg cgcggcgtaa acgggagctg
     3421 ccgcagctgc aatggtacgg gtaatgcgga ctttttcctc gccttcggtt acttcgattt
     3481 cggcgatacc cgattcttca accaaatcaa tcagtttttt taatttgcgc aaatccattt
     3541 ctgttccttt aaaggctgcc ggtgttccgg cgggttgttg cgttggtttt tcagaaaaca
     3601 gccggcttgc ggcaacggcg caaaccgggc ggaatggtgt tcggatacgg ttttcctgtg
     3661 gtgggaaacg accgtgaaat tgtgttcatt ttcccgaagt tgtcggtaaa tgtccagtaa
     3721 aatatcaaaa aacggcggtt tttgggggaa atgtgcagga agtttgattt tgcgcacaag
     3781 atgccccgag tcaagagtgt ttattctaat ctgttggttt ttcgggcaaa gatgccgtct
     3841 gaaaaagggc taaagtgcgt ataatggcgg cttgcccgaa cgagagtgta aaaatggata
     3901 tttcagattt tgactttacc ctgcccgaac acctgattgc ccagcatccg cccgaggtgc
     3961 gcggcagcag ccggcttttg gtcgcgctgc ccgatatgcc gctgcaagac cgggtgtttg
     4021 gcgatttgcc cgattatgtc gaggcaggcg acgttttggt attcaacaac accaaagtca
     4081 tgaaggcgcg gctgtttggg cagaaagaca gcggcggcag gatcgaagcc ctgattgagc
     4141 gtgtgttgga caaccatacc gcattggcgc acatccgttc gtccaagtcc cccaagcccg
     4201 gtatggggct ggtgtttgaa ggcggtatcc gtgccgtgat ggtcgggcgt gagggcgaac
     4261 tgttctgcct gcgttttgaa ggcggtcaaa ccgtttacga acttttggaa cagaacggac
     4321 acctgcccct gccgccttat atcgaacgtg ccgccgatgc ggacgacgac agccgttatc
     4381 aaactgttta tgccaaatat cagggcgcgg tcgccgcgcc gacggcgggc ctgcatttta
     4441 cggaagaact tttgcgccgt ctgaaagaca aaggcgcggt aaccgcagaa gtaaccctgc
     4501 acgtcggtgc ggggacattc caacccgtgc gcgtcgataa aatcgaagaa cacaaaatgc
     4561 acagcgaatg gtttgaagtg ccgtctgaaa ccgtcgccgc cgttgaggcg gcaaaagccc
     4621 gggggaacaa agcctgggcg gtcggcacga cttccatgcg cgccctcgag tctgccgcgc
     4681 gcgcaacggg atatttgaaa gacggacagg gcgacaccga tattttcatc acgccgggct
     4741 accgttttaa tgttgtcgac aggctggtta ccaattttca tctgccgaaa tcgacgctgc
     4801 tgatgttggt cggcgcgttt tcgggtatgg gtcatatccg cgccgtgtac cgtcatgcga
     4861 ttgaacgtga ataccgtttc ttcagctacg gagatgcgat ggttttgggg cggaacgaag
     4921 ggggcgggct ttaaactgct gctgtccgtt gcaaggcaga tgccgtctga accgtggttc
     4981 gggcggtatt tttatggatg tccggcagtt ggataatcca ccgccccaaa ttagggtgct
     5041 taaaggtcaa aagaaagtga aggctatgtg caacaaaatg ccgtctgaaa ccgcaaaacg
     5101 gcttcagacg gcattgttca acctgattca ggcatcagtt gcggtttttc aaacgaccgt
     5161 gcagctcttg aacgctgtac acacccagat aatcccggct tttcgcgcct tcgctcatcg
     5221 cttcgccgcc ggcggtggtg gtgtattgcg gcacgcgttg ctgcaatgcg ctttggcgga
     5281 tgatgtggct gtcggacacg gattgcggat cgctggaaac ggtatttacg accagtgcga
     5341 tttcgccgtt tttcagcgcg tcgccgatgt gcgggcggcc ttcggggact ttgttgatgg
     5401 cctgcacaat cagcccgtgt tcggtcaggt attgcgccgt gccgcgcgtg gcgcagatgc
     5461 cgtagcctaa ggcttggaag tttttggcgg ttttaatgac gcgttctttg tcttcttcgc
     5521 gcacggagag gaagattttg ccggtcgggt tgaggcgttc gcccgcgccg agttgggctt
     5581 tgtagtaggc ttcgccgaaa cttgcgccca cgcccatcac ttcgccggtg gagcgcattt
     5641 ccggacccaa aatcgtatcc acgcccggga atttgatgaa tgggaacacg gcttctttaa
     5701 cggcatagaa atcggggacg acttcttttt ccacgccttg ttctttcagg gaaatgcctg
     5761 ccatgcagcg cgcgccgact ttggcgagcg gcacgccggt ggctttggag acaaagggga
     5821 cggtacggct ggcgcgcggg ttcacttcca acacgaacac cacgccgtcc tgcacggcaa
     5881 actgcacgtt catcagtccg accacgccca gcgcgtacgc catcgctttg gtttggcggc
     5941 ggatttcgtc ttggatttct tcgcttaagg agtagggcgg cagcgagcag ccggagtcgc
     6001 cggagtggat gcccgcctgt tcgacgtgct gcatgatgcc gccgataacc acatctttgc
     6061 cgtctgaaac gcagtccaca tcgacttcaa tcgcgttgtt gaggaagaaa tcgagcagca
     6121 cggggctgtc ttcggaaacc tgcacggctt cgcgcatata tttttgcaac tgctcggcgg
     6181 agtggacaat ctgcatggcg cggccgccca aaacataaga cgggcgcacg accagcggat
     6241 aaccgatttc ttcggctttg acgagtgctt cttcttcgtt gtgggcgatg cggttgggcg
     6301 gttggcgcag gcctaagtcg ttcaacactt tttggaagcg ttcgcggtct tcggcggcat
     6361 cgatgctgtc ggcggatgtg ccgatgatgt tcacgccgtt ttcaaccaat gcgttggcga
     6421 gtttcagcgg ggtttgaccg ccgtaatgaa caatcacgcc ccacgggttt tcggtgcgga
     6481 cgatttccaa cacgtcttcc aatgtcagcg gctcgaaata gaggcggtcg ctggtgtcga
     6541 agtcggtgga cacggtttcg gggttgcagt tgaccataat cgtttcaaag cccgattcgc
     6601 gcagggcgag tgcggcgtga acgcagcagt agtcaaactc gatgccctga ccgatgcggt
     6661 tcgggccgcc gccgagaatc atcacttttt tacggtcgga aggacgggat tcgcattctt
     6721 cttcgtaagt ggagtaaaga taggcggttt cggtggcgaa ctcggcggcg caggtatcga
     6781 cgcgtttgta aaccggatgc agcttcagcg cgtagcggtg ttcgcgaact tctttttcgc
     6841 ttacgttcaa caattgtgcc aaacgtttgt cggagaagcc tttgcgtttc agacggcgta
     6901 gggcggcgta atccaaatct tgcaactggc cgtctgaaac cgatttttct tccttcatca
     6961 agtcttcgat ttgcgccaag aaccaagggt cgatggcgca gatctcgtgg atttcttccg
     7021 gcgtgaagcc cgcgcggaac gcgtctgcca caaacagcat acgttcgggg ccggggttgg
     7081 ccagttcgcg gcggatttcc gctttgtctt cgctgcgcgg attgaaaccg cacaagccgg
     7141 tttccaaacc gcgcagggct ttttggaagc tttcttgaat ggtacggccc atcgccatta
     7201 cttcgcccac agatttcatc tgcgtggtca ggcggtcgtc tgcggcgggg aatttttcaa
     7261 acgcgaaacg cgggattttg gttaccacat agtcgatgga aggctcgaac gacgcgggcg
     7321 tgcggccgcc ggtgatgtcg ttgcgcaact cgtccagcgt aaagccgacc gccagcttcg
     7381 ccgccacctt cgcaatcggg aagcccgttg ctttggaagc cagcgcggac gaacggctca
     7441 cgcgcgggtt catctcgatc acaatcatct cgccgttttc agggttcacc gcaaactgca
     7501 cgttcgagcc gcccgtgtcc acgccgattt cgcgcaatac cgccaacgaa gcgttgcgca
     7561 tgatttggta ttccttgtcc gtcagcgttt gcgccggcgc aaccgtaatc gagtcgcccg
     7621 tatgaacgcc catcgggtcg aagttttcaa tcgaacagat gatgatgcag ttgtccgcct
     7681 tatcgcgcac cacttccatc tcgtactctt tccagccgag cacagactgc tcaatcagca
     7741 gctcatgcgt aggcgacgca tcgaaaccgc gttcgcaaat cgccaaaaac tcatccttat
     7801 tgtaggcaat gccgccgccc gaaccgccca tcgtgaaaga cggacgaatc agcgtcggaa
     7861 agccgacctg ttcttgcgcc gccaaggctt cgttcatggt gtggcagaca aaagatttcg
     7921 ggcaagagag gccgattttt tccatcgctt ctttaaagcg gccgcggtct tccgccttgt
     7981 cgatcgcgtc ttccgttgcg ccgattaact cgacattgta tttcgccagc acgccgttac
     8041 gcgccaaatc cagcgcacag ttcagcgcgg tctgaccgcc catcgtgggc agaatcgcat
     8101 cgggccgctc cttggcgata atcttctcca ccgtctgcca cataatcggt tcgatgtagg
     8161 taacatccgc catttcaggg tcggtcatga tcgtggcggg gttggaattc accagaatga
     8221 ctttatagcc ttcttcacgc aaagccttgc aggcctgtgc gcccgaatag tcaaattcgc
     8281 aggcctgacc gataacgata gggccggcgc cgatgataag gatggatttt aggtcggtac
     8341 gtttgggcat gggtgggtct ctatttagtt aaaattaaat catttttatc atacgaaaat
     8401 gtaatattag gatacttttg ctgtaacttt tcccatgatt gataagtttc caagaattgc
     8461 gcacccccat catttggatc gatttgcaca tgccatatta aatcattccc tgtatatgga
     8521 tctaatgtta tgtcattgtt aaaaaataaa taccagtcca tattcttata taagaattta
     8581 tttatttctt tttctatttc cttatatttt ttttcgttag ttgaaaaaat atttttgaaa
     8641 gaaaatttag ttctaacaat taaaatctca ttggaaatta aataatcaat tattgaccga
     8701 taaacttcct ctgcagcatt tacaatagac gtgtttgtat aattaataag ttgtccacaa
     8761 agcgcaatta tttttccatc tactactttt aagtctagat agcattgtcc gccattatcc
     8821 caaaatgcct taaaaggcaa tcttttttct ataccaaaat agttttttgg gttcaagtag
     8881 atatcactaa acattactaa ctccttggtt aagtgtggta agtcatagct cgctcatgtg
     8941 gcaagtgtag tttggattga aaacctaaca caaaccgctt aattgtctaa aatgttgggt
     9001 ttgctaaccc aacttgtata tcgaaacccc cgtatcgtag caagccgtag cccgcatgta
     9061 gggtgtgcgg tacgcacgca cgcgttcttc attttccctg taaccccgac ccaccgcatg
     9121 cgcgccttgc ggcacacact ctaccgatga gttcaaagat tgtctgaaaa aatgctcgcg
     9181 gcgtttgttc cacctgcctt gcgataaagg cagcctgaaa aattcccgct gttgatattt
     9241 cgtgcattct ttttcagacg acctgaaatc aacggttgca aatttaagtt atttttcaaa
     9301 ccaccggcaa ccgaaaaatc tgccgaaacc cactccctcc cccgtggggg agggctgggg
     9361 ggagggcatt ctccgaatgg tggcaatctt tcctaatacc ttcgccgccc aaatacaagc
     9421 cttgcggctt gttgccctct ctctagctct ctcccacagg gagagaggac gggtcggctg
     9481 ttggggttga ggtttgctgc aaggaaaaca ggttgtgcag gctgcttttt atttttcaga
     9541 cgacctgcat caacggttgt aaatccaatc tgtttttcaa accgcctgca accgaaaaat
     9601 ctgccgaaac ccactccctc ccccgtgggg gagggccggg gagagggcat tctccgaatg
     9661 gtggcaatct ttcctaatac cttcgccgcc caaatacaag ccttgcggct tgttgccctc
     9721 tctccagccc tctcccacag ggagagagga cgggtcggct gttggggttg aggtttgctg
     9781 caaggaaaac aggttattca ggttgctttt ttgcttttca gacgaccttt ttaaacgctt
     9841 aattcagtta attttacctt attattttca aaatctaatc aaaatcaacc gtttgctacc
     9901 gtgctggctg cttttccaat tcctgcaata cgcgcaggat ttccgccagt acatcgtttg
     9961 tctgctgcaa aatttcgtga ttccaaaaac gcagcacggt aaagcccaag ctgttgagat
    10021 ataccgtccg cgcgtggtcg tatacggctt gttccgcgtg ctgcccgccg tctgcttcga
    10081 caatcagctt gggcgttacg cacataaaat caacaatata attccccatc ggctgctgtc
    10141 ggcggaattt atagccgttc agacggcctg cccgcaggtg ttgccacaat tttgcttccg
    10201 cctcgctcat ttcttgacgc atggctttgg cgcgttggcg cagggcgggg ttttcggcgg
    10261 tcaatagttt ctcgggcggg ttcatttttg ttatcgggtt gctgtttgtg taagccttac
    10321 agcttgttgc cctctctcta actctttccc acagggagag aggacgggtc ggctgttggg
    10381 gttaaagggg ctgcaaggaa aacagcttgt gcaggctgtt ttttattttg cataatccgt
    10441 ctgaaaatta ataactgctg atttccagca ggttgccatc gggatcgcgc aggtaaaccg
    10501 attggatttt gcccattgcg cctgtgcgcg ctacgatgcc gcttaaaggt ttgatgccgt
    10561 gtgcggataa ttcctgtaaa accgtttcca gtggggcgta tcggtcagca ggcataaatc
    10621 cgctgtgccg caggcggcgt gttgcgcgtt aggctgaatt tccgcaccgc gcccgtgtag
    10681 gttgattttc tgactgccaa acaacaaagc tttacggttg ttgccaaatg aaacttcttc
    10741 catgcccaaa acttgtgtgt aaaacgcgat ggttcggtca atgtcggcaa cagtcagtac
    10801 tagatggtcg agtgcgctaa ttttcatttc cagctttctt tttcagacgg cagcagcata
    10861 ctgttgccgt ctgaaaatca ttatgcttgt tttgcagcct tcatattgcc aatgaatttg
    10921 tcgaacaaat agccgacatc ttgcggaccc gggctggctt cggggtgtcc ttggaaacag
    10981 aacacgggtt tgtcggtcag ctcgatgcct tgcaaggtat tgtcgaacaa ggatttgtgg
    11041 gtaatgcgtg cgttggcggg cagggtgtcg gcatcggcgg cgaaaccgtg gttttggctg
    11101 gtaatgacga ctttgccgct gtccaaatct tgcacaggat ggttcgcacc gtggtggctg
    11161 aagcgcattt tcagggtttt cgcgccgatg gcgaggctga tgagctggtg tcccaagcag
    11221 atgccgaaaa tcggtttgcc gctttccatc agtttttgca cggcttcgat ggcgtaggtg
    11281 caaggctcgg ggtcgccggg gccgttggac aggaacacgc cgtcgggatt gagtgccaac
    11341 acgtcttccg cgctcgtttg tgcggggacg acggtcaggc ggcagccgcg cgaggcgagc
    11401 atacgcagga tgttggtttt cacgccgaaa tcgtaggcga cgacgtggta aggctgtttg
    11461 tcaggggtaa cgaaaccttt gcccaattcc cattcgcctt ccgtccattc gtaagtttcc
    11521 gtgcaggaaa cttcttttgc caaatctttg ccgaccatgc tgccgaatgc ggcgatgagt
    11581 tcttgcgctt tttcaacggt ggcatccgca cctgtcagaa tcgcgccgcc ttgcgcgcct
    11641 ttttcgcgca acagcatggt caggcggcgg gtgtcgatgt cggcgatggc gacggtttcg
    11701 ttgcgtacca aatagtcgtg caggctttcg gaggcgcgga agttgctgtg caagagcggc
    11761 aggtcgcgga taatcaggcc ggcggcgtaa acgctgcggc tttcttcatc ttcggcgttg
    11821 gtgccggtat tgccgatgtg ggggtaggtg agggtaacga tttgtttgca gtaggacggg
    11881 tcggtcagaa tttcctgata gccggtcatc gaagtattga acacgacttc gccggaagcc
    11941 gaaccttcgt aaccgattga tgtgccgtgg aatacgctgc cgtcagcgag gacgaggagg
    12001 gcgggggtgc tcatgatggg aatcctgttt ttaataaaat tcttgacaat gccgtctgaa
    12061 gggacttcgg cagggggcat ccggtcggaa aaatccggtc aaaaaaaaac acgccgcaga
    12121 acaaaaccgc gtaacgtgct tttcgggcaa gtgcctatac cctgaaagca gcatatttta
    12181 agacgaaaca tacccgattt caagcgcaaa cgcggcaggc gggctgatat gttcgcgcga
    12241 aaacggaaat ccggggcata aaaccgcccg ctccgcgccc cctatgcccg ttacgcattt
    12301 ccccacgtcc gcccggcgaa actatgggaa tacccgaacc gtcattcccg cgcaggcggg
    12361 aatccggacc tgtcggcacg gaaacttatc gggtacaacg gtttcttgag attttacgtc
    12421 ctagattccc gcctgcgcgg gaatgacggc atcggtttga cggtatttaa ttgaattgcg
    12481 gaaattgacg gattcagtga gattggcggg atgaagccta ccctgtagcc cgccttttat
    12541 agcggattaa caaaaaccgg tacgggttgc cccgccccgg ctcaaaggga acgattccct
    12601 aagatgccca agcaccgggc gaaccggttc cgtaccattc gtactgtctg cggcccgccg
    12661 ccttgtcccg atttttgtta atccgctata cgaacccgcc ctctcccgaa aaacgcaaaa
    12721 aatgccgtcc gaaaaccttt cggacggcat tttcgcgtga accgtcattc ccacgaaaac
    12781 agaaaaccaa aatcagaaac ctaaaattcg tcattcccac gaaagtggga atccaggact
    12841 caggacctga gaaacctttt tacccgataa gttcccgtac cgaccggtcc ggattcccgc
    12901 ctgcgcggga atgacgcgtt tcatttgccg ccccctcccg aaaaacgcaa aaaaatgccg
    12961 tccgaaggcc tttcggacgg catttgcgga aaaaccggcc gcgcgggcgg gtcagaagaa
    13021 gacttcgcgc cagcttaagc gtttgatacc gcacatcggg ccggtaatat ccaagctgtc
    13081 caaatcgttc atcagcaggg tgcgcacacc ttttccggag aagcaccggt tattgcgggc
    13141 gggtttttta ccctctttga atgttccgct gccgcctgca tcaccgtctg ccgtgacggg
    13201 gaaatcgtct gttttctttt cgtccaggta gcgcacatta accggcttgt cgtaaacata
    13261 tccgttcggg cagacggttt tgccgttttt ccacatgcag cctataggga cggatttgcc
    13321 gtcggcggtt ttcttatggc cggaatattg tgcgacatcc ttattggctt ccggcacaat
    13381 cgggcgcgcg cttctcggag tcaatgcgcc gccgtcggcg gtattgatgc ccaaaatggc
    13441 ggtttccgcg ccgcatttgt cattacccgt atatttccgg atggttacga aggcggtacg
    13501 caataccacg gtcggtttga cggtaacgcg ccgtccgcct gtcaatttca ccgcccagcc
    13561 cttgctgccc gaaccgtcgg atctcttgtt caggaataat gttttatttt cctgagtaag
    13621 gtgttgctcg agcagcccgc tccccaaaac gccgcggctt gcatttacat tattcgccgc
    13681 cttatcgtcg tcgaagatgc cgtaaatata ttgttcgtcc gtattcagta catcttcttc
    13741 ggtcaaatcg ctgcccgtgc cgaagataac cacgcgtttg tctgccagtc gggaaacggc
    13801 gggcgcggaa gtaatcggtt ttgtgccttc gaaaatagtg cgtacagccc actcggacgg
    13861 cttgtcgctg ctcaaatcaa agcggtacat attcccgccc cgatcgccgg cataggcgat
    13921 atcgaccgtg ccgtccaaat ctttatccac cagcgtgggg gacgaaagcc cgcctttgcc
    13981 gccgggtgct tcgatttttg caatcggcgt acctaaggtg tctttcaaat catacacata
    14041 cagcgcggtt gtattatcgc tgctgacaat atctttagcc gcataaccgg aggcgaggaa
    14101 ggcggcgtat ttgccgtttt gggttttgcc gatttgcggc gtaccgacgg tgtagcctaa
    14161 tttcacgcga ttactgtcat tcttattgtt atttttgtcg ttttggacat caaacatgga
    14221 aacgccgacc gggttgctgt cgattttggt caaatccaag gcgtatgcgc ctctgccgcc
    14281 caggcccatc gcaccaaaca taaagaaatg tttttgcttg tcttggtcat ctgtaatgcg
    14341 gcgcaagaca aagccgccgt ccacgccgta gcggtcgccc acatagcctt gttcggcaaa
    14401 ggcgcgcagc tctttggcga ggtcggagtc attgccttca atatccttac gctccatcgt
    14461 accggggatg tagctgagct tcagttcgta gcctcgttgg tctgtgccgg tttttttgaa
    14521 gatatgcacc atcccgtcgt tggcagaagt tgccagatac ccgccgaccg ccgttatcgg
    14581 gctgttgacg atgtcgccca aatcgcgggg tttgtcattg tcatcttctt ttgtgcggat
    14641 gcggtatttt tggctgtatt gttttttgtc gctttgtttt ttgttgtttg gttggttgaa
    14701 tgttttaaat atatcgtcat taccgtaata ccggaccgtc caaggcagca gcacttttgc
    14761 ccactcgtcg acctcaggtg tgacgagcct gtccttgtag atgccgaaag tgtcgttttt
    14821 gccgtcattg ccattcaaac ccacgatcct gtcgcgagtc ggggcgatcc ggtacacgcc
    14881 gcccggcaat cggatcacgg tctgccttga gttgaaattc ggctcgcggc ttttgatgtt
    14941 ctgcgtatcc aaagcggcga gggaatgccg gccgggccgg gcggggtcgg tttgagtttt
    15001 cagctcttgg aggaagatgc ggctgctcga actgccgggg taggtggaaa ccgaagcgga
    15061 atacatctgc accttaccat cttgcctagg tccgaaccac agcgcggggg cggtcagtgc
    15121 cggcgaaggg actttggatt tgggattggg gttcggttta ttgatgcagc gcccggcttt
    15181 gacttccggc aggccgagct tgaccgtaat ctgcccggta tctttaatgt cccacttaga
    15241 ccaaaaattt agaatgccgc taagccccgt attttgtgtc ttcacatcga tgctcggctt
    15301 caagacaccc aaccgcactg ttttgccggt gatatcttta atcccttttt tgtccagcag
    15361 gtgcagcttg gcgttcagat aataggccat ggcggtcgtt tcttgctgcc agttgctaag
    15421 ggaaatacgg tggccttctg tcgtatagac gaggttttga ttactattac tattgttttc
    15481 atcaaaagaa gataccaatt tgctggatga tctgccatct ttggcggtac cctcgccgcc
    15541 caaattgaaa gacacgccca accatggatg atccttcaat ttgtaaatgg gcgaattttc
    15601 gcggcttggc tctgtgtgcc tatccagccc gcctcttgtt tttagcaagt cgggattatc
    15661 gaaggaaaat cgggttttat aggtaagttt gggacagtct ttggtacttc cgcaacggat
    15721 accggtgtag ccgtagcctg ccagcccggg ccgggtggta tgaatccaat tgacggcatt
    15781 gccgcgcttg ttcagctcgg cggtatcaaa gccggaaacc ttgccgtagg gcggcaggta
    15841 ggtggctgtg ccaaaaacgg cagtaccgct ttgttgagaa acaagctcat cgttattgtt
    15901 gaatgagata aaattgcttg tgatgccgaa tgtgtttttc tggctcgtat ggctaaatgt
    15961 ccgctccctg cttttgtcct ttaatgctga ttgattatat tgatccttcc actttacctc
    16021 gggctgcttt cgctcgttca tgataatagc gtattgatgg gtttgcgcca tcgccccccc
    16081 ccccgccggt atgggaaaac atcaagatgg cggtataaag cgcggtatgg cggaaaaccc
    16141 gcctttttaa agttttattc atcgtatttc cttttcggtc aaaccccccg cccttcgggg
    16201 cggcaggatc aggctttgtc cgggaggggt gcaagccctt ccgaatcagg gcggcgcctt
    16261 atgtgccgcc ctgtgtgttg gaacatattt tatcccttaa atcttgcttc gcgggatacc
    16321 ggcggcggca ggcgcgccgc aaacggcggg attgggcaaa ccgcccgatc ccgcgcccgc
    16381 cggattgccg gttggaaaac ccctttggcc ggatgcaatg tatagggttg ccgcatcatt
    16441 ctatccttgc gcgcttatcc atggtacagc ggttttcggc aatccgcaac cgtttgcccg
    16501 gcccgccatt gccgcctgcg cggcaatggc gggccgggga ggcggcattt tccaagttgc
    16561 ggcaaccttt cccaacaact taaccgccca aatacaagcc ttgcggcttg ttgccctctc
    16621 tctagccctc tcccacaggg agagaggacg ggtcggctgt tggggttgag gtttgctgca
    16681 aggaaaacag gttgtgcagg ttgcttttta tttttcagac gacctgaaac aacagctgca
    16741 aatctaagtt gcctttcaaa tcgcctgcaa ccgaaaaatc tgccgaaacc cactccctcc
    16801 cccgtggggg agggccgggg agagggcatt ctccaagttg cggcaacctt tcccaacaac
    16861 tcaaccgcct aaatacaagc cttgcggctt gttgccctct ctccagccct ctcccacggg
    16921 gagagaggac tatgaagccc gccggcaggc gcggggcttc agacggcatt gctgttgcgg
    16981 tttcgggcgc ggctttattc gacgacaatt ttagggaacc ggctgctgaa gtctttgcct
    17041 ttgtcggcaa tgcccagggc gatttggaat gcggcatcgg tgtagattcg ggcgatggcg
    17101 gggtgttcgt cgaacagtcg cgccggtgtg ccgccgtcca tggcttcgcg tacgggcagg
    17161 cttaggggaa gctgtccgag cagggggacg ttgaggcgtg ccgccaaatc tttgccgccg
    17221 tccgtgccga acagtgcttc gctatgcccg cagttggagc agatatggac ggacatgttt
    17281 tccaatacgc ccaaaatggg aatgttgacc ttgcggaaca tatccacggc tttgcgcgcg
    17341 tctatcagcg cgatgtcctg cggcgtggtt acgatgacgg acccggttac ggggatgcgt
    17401 tgggacagcg tgagttggat gtcgcccgtg ccggggggca ggtcgatgaa aagatagtcc
    17461 acttcgtccc actcgctttg gaacatcagc tgctgcaagg cttggctgac catcggcccg
    17521 cgccagacga cggcttggcc ggtatcgacg agaaagccga tggacatgac ctgtatgccg
    17581 tctgaagatt cgacgggaat gagtttttgg tttttctgat cgggtttgcg gtcgtccacg
    17641 cccagcatcg tgggctggct cgggccgtaa aggtcggcat cgagcacgcc gacgcgtgcg
    17701 cccatgcgcg ccattgcggc ggcaaggttg gcagtggcgg ttgatttgcc cacgccgcct
    17761 tttcccgatg cgacggcaat gatgtttttc acgcctttga tagtagtaac gccgggccgg
    17821 actttgtgtg tgccgatttc ggtgtctatg gacagatgga tgtgtgtgtc gcctgtttcg
    17881 ggcatcaggg tttcttgtac ggcatcggcg agggcggcgg cgatgtgcgc gacagggaaa
    17941 ccgaaatgca gggcgatatg gatgccgtct gaacgctgtc cgaccgagcg gacggccttt
    18001 tcgccgccga gcgtgcgtgc cgtattcgga acggcgacgg tgtcgaggag ggtgcggatg
    18061 ttttgtatgt tcatgatgtg tgcctctgtt cgcaagtcgt gtgaggggaa gatagacgga
    18121 aagtgtacat gattttgggc agtttgcttt tttcttgtgc gaacttttac acggtatgcg
    18181 gcggattgtg aaaatccgtt gccaaaatat cccgtgcaaa cagcagtctg caattaagcc
    18241 tgtaaaaatt gcttgacggc ggggaacggg gctgtataat gcacggctta tcgggtcgtt
    18301 agctcagccg gtagagcagc ggacttttaa tccgttggtc gagcgttcga atcgctcacg
    18361 acccaccaga taaccggaag ccaagtttcg agacttggct tttttgtttg cctgccggtt
    18421 gcgcgggcgt accgtttgcg ggggtgtatg aaaaagaaac tgctttcggg catcaaattt
    18481 gccgttcgga cggcattggt gtttttgctg gtgtcgctgt ttttggattg ggtacgcaag
    18541 cccgacgaac ctgccggggc ggcagggcgg cctttgaccc tgctgtcggg gcagcggctg
    18601 actttgggac agtttagccg ggataggacg gtgctggtgt atttttgggg aagctggtgc
    18661 ggcgtgtgcc gttatcagtc gccgataatc gatgatttgg cggcggacgg cgtgccggtc
    18721 gtcggcgtgg cggtacgttc cggcagcgcg tccgaagtgg cggcatatat ggcaaaacgg
    18781 ggcttgggct ttccgactgt cagcgatgag gacgggggtt tggcaaggtc ttggcggatt
    18841 gccgcaacgc ctgccgtcgt tttggtcaaa aatgggaaaa tggtccgcta tacgacggga
    18901 atcagcagtt attggggctt gcgcgcacga atttttcagg cggatttttt cggttaactt
    18961 ttgtttttgt caaactttcc gctatgtaga gaatcaaacg gcatatgcct tgcgcggcgg
    19021 atgcggcggc ttttgttttt tgggaaagag ccggcgcgcc tgccgatgta atcccttgtt
    19081 gtgattgtgg gaaaaataga ttaaaatata actattaaaa tattttcaga taggattatc
    19141 ggaattaaag tcttttatac ccggtcgtcc gatgaggttt atagcgtatt gttgctatat
    19201 gttcgttttg ttatataacg gttgcatcaa aaattacgcc cacaggcttt cccgacggtt
    19261 tgaaagtttg attttcgata acttggagac ttaaacaatg cctacccaat caaaacatgc
    19321 gtctatcaat atcggtctga tacaggcaag ggaagccctg atgacccaat tcaggcctat
    19381 tctgaatcag gcgaatatta ccgatcagca atggcggatt atccgtcttt tggcggaaaa
    19441 cggcacattg gattttcagg atttggcgaa tcaggcgtgc attttgcgcc ccagcctgac
    19501 cggtatcctg acccgccttg aaaaagcggg gttggtcgtc cgcctgaaac cttccaacga
    19561 ccaacggcgc gtttatctga agctgacttc cgagggcgag aagctgtatg aggaaatcgg
    19621 cgaagaagtg gacgagcgtt acgacgctat cgaggaagtg ctgggccgcg agaaaatgct
    19681 gctgcttaaa gacctgttgg cagaacttgc caaaatcgag gatgcgttga actcgtaata
    19741 cgccgtaatg cgcggaaacg tccgaccgac ggctttttga atcagaactg ctgcacatgg
    19801 gggatgcctt gtgtgcagca ttcttatata ggggacggtt taaaggggaa aaatggcgga
    19861 tttgcagaaa acttttcaaa cttcgttccg tgatgcgatg gcatcctgtg cggcaggcgt
    19921 tcatgtcatc acgacagacg gtgcggcagg gcgttacggc attacaatga cggcggttgc
    19981 gccggttacc gacgagccgc cgaccgtgat gctgtgcata aaccggagtg cgcgaatcat
    20041 tccgatcctg tcggaaaacg gcagcctctg catcaatatg ctggcggacg aacatcagga
    20101 tgttgccgaa cattttgccg ggctgaccgg cctgtcgccc gaagagcggt ttgcctacca
    20161 tatttggcat cgcggcaaaa cgggacaact tgaaatagaa ggcgcgttgg cgcacctgca
    20221 cgggcatatt gtcggcaaac atgaaatcgg cacgcatttt gtgttttacg tcaggctcga
    20281 cgaaatcaaa aactgcgggt gcaaacgccc cgcgctgctg tatttcagac ggcagtttag
    20341 gcctttagac tgatattcgg acagatatat gaaagcgatg atactggcgg caggacgcgg
    20401 cgagcgtatg cgccctttga ccgacaccac tccgaagccg ctgctcgatg tggcgggtaa
    20461 gcctctaatc ggttggcact tgtgccgtct gaagcaggcg gggtttaccg aaatcgtcat
    20521 caaccacgct tggctgggtc ggcagataga aaatgctttg ggcgacggct cggcttatgg
    20581 cgtgaacatc gcctattcgc ccgaacccgc aggcggtttg gaaacggcag gcggcatcgc
    20641 gcaggcattg ccgctgttgg gtgggcagcc gtttttggtg gccaacggcg acgtgctgac
    20701 cgacatcgat tttaccgccg cgtttcagac ggcatcgtcc ctgcccgggc acatttccgc
    20761 acatttgtgg ctggtgggaa atcccccgca caaccccgac ggcgattttt ccctgctgcc
    20821 cgacggcagc gtgcggccgg aagtatccgg cggcaacgga ctgacattca gcggcgtggg
    20881 tatttaccgt cctgaaatgt ttgacggaat cgaagcgggc agtgtggcaa aactcgcgcc
    20941 cgtattgctg aacgaaatgc ggcaaaaccg cgtgagcggt cagaagcata cgggcctgtg
    21001 gctggatgtc ggcacggtat gccgtctgaa ggaagcgcaa gcccttgcag cggcttggaa
    21061 gtgaaaactc ggtttcaggc ggtatggcgg attcggttta acgtttcagt gccaacgtca
    21121 acacgccgcc gtaaccagcc ccaagtctat ccattcctgc gtgttcgggc gttcgtctaa
    21181 gaaaatcacc gccatcagcg cgaccaagac caggctgaat ttgtcgacgg gcgcgacttg
    21241 cggggcgttg cccagttgca gggctttgaa gtaggcgagc caagatgcgc cggtggcgag
    21301 tccggacaaa accggaaacg tccggttgcg ccccgtgaag ccgtttacgc cctgccattt
    21361 gccggtgtag gtcaaaaaca ataccaaggc ggcgaggatg accaaggtgc ggataaaggc
    21421 ggcgaaatcc gaatctatgc cctgcaagcc cattttggcg aaaacggcgg tcaatgaggc
    21481 gaagcctgcc gatgccaatg cccaaaacag ctatgcgttg ctgcccatgt tttctccttt
    21541 gattgtgaac aatatgaacg gtatttttgt tgctgcgtca aaaatttcac tgcgggtttg
    21601 gtgcggataa cgttataata tgcctgatat tattttcaat ccacctgttt gtcgcctgat
    21661 gctttcagac ggcatgtccc tcctcatttc taaaggaaaa tcatgagctt caaaaccgat
    21721 gccgaaaccg cccaatcctc caccatgcgc ccgattggcg aaattgccgc caagctgggt
    21781 ttgaacgttg acaacattga gccttacggt cattacaaag ccaaaatcaa tcctgccgaa
    21841 gcgttcaagc tgccgcaaaa acaaggcagg ctgattttgg ttaccgccat caacccgact
    21901 ccggcgggcg aaggcaaaac caccgtaacc atcggtttgg cggacgcatt gcgccatatc
    21961 ggcaaagact ctgtgattgc tttgcgcgag ccttctttgg gtccggtgtt cggcgtgaaa
    22021 ggcggcgcgg caggcggcgg ctacgcgcaa gttttgccga tggaagacat caacctgcac
    22081 ttcaccggcg acttccacgc catcggtgcg gcgaataacc tcctcgccgc catgctcgac
    22141 aaccatatct accaaggtaa cgagttgaac atcgacccca aacgcgtgct gtggcggcgc
    22201 gtggtcgata tgaacgaccg ccagttgcgc aacatcatcg acggtatggg caagcctgtt
    22261 gacggcgtga tgcgtcccga cggcttcgac atcaccgtcg cctccgaagt gatggcggta
    22321 ttctgccttg ccaaagacat cagcgatttg aaagagcgtt ttggcaatat tctcgtcgcc
    22381 tacgccaaag acggcagccc cgtttacgcc aaagatttga aggcacacgg cgcgatggcg
    22441 gcattgctaa aagatgcgat taagcccaat ttggtgcaaa ccatcgaagg cactccggcc
    22501 tttgtacacg gcggcccgtt cgccaacatc gcccacggct gcaactccgt taccgcaacc
    22561 cgtctggcga aacaccttgc cgattacgcc gtaaccgaag caggcttcgg cgcggacttg
    22621 ggtgcggaaa aattctgcga catcaaatgc cgccttgccg gtttgaaacc tgatgcggca
    22681 gtcgtcgtgg cgactgtccg cgccctgaaa tacaacggcg gcgtggaacg cgccaacctt
    22741 ggtgaagaaa acctcgaagc cttggcaaaa ggtttgccca acctgttgaa acacatttcc
    22801 aacctgaaaa acgtattcgg actgcccgtc gtcgttgcgc tcaaccgctt cgtgtccgac
    22861 tccgatgccg agttggcgat gattgaaaaa gcctgtgccg aacacggcgt tgaagtttcc
    22921 ctgaccgaag tgtggggcaa aggcggcgcg ggcggcgcgg atttggcgcg caaagtcgtc
    22981 aatgccatcg acaaccaacc taataacttc ggtttcgcct acgatgtcga gttgggcatc
    23041 aaagacaaaa tccgtgcgat tgcccaaaaa gtgtacggcg cggaagatgt cgatttcagc
    23101 gcggaagcgt ctgccgaaat cgcctcgctg gaaaaactgg gcttggacaa aatgccgatc
    23161 tgcatggcga aaacccaata ttcattgagc gacaacgcca aactcttggg ctgccccgaa
    23221 ggcttccgca tcaccgtacg cggtatcact gtttccgccg gcgcgggctt catcgttgcg
    23281 ttgtgcggca atatgatgaa aatgccgggc ctgccgaaag ttccggctgc cgagaaaatc
    23341 gatgtggacg aacacggcgt gattcacggc ttgttctgaa cggtttttga aaccggatgc
    23401 cgtctgaagc cgtttcagac ggcatttttt cggaacgcgg gcggcggtat gctataatcc
    23461 gccgttaaat ttctctattt tcaggaaaaa ccatgagttt gaaatgcggc atcgtcggtt
    23521 tgcccaacgt cggcaaatcc acccttttta acgcgctgac ccaatcgggc atcgaagcgg
    23581 caaactatcc cttctgcacc atcgaaccca acgtcggcat cgtcgaagtg cccgacccgc
    23641 gtatggcgga gctggcgaaa atcgtcaatc cgcaaaaaat gcagcccgcc atcgtcgagt
    23701 ttgtcgatat tgccggcttg gttgcgggcg cgagcaaagg cgaaggcttg ggcaaccggt
    23761 tccttgccaa catccgtgaa accgatgcca tcgtcaacgt cgtgcgctgc tttgacgacg
    23821 acaacatcgt ccacgtttcc ggcaaagtcg atccgattgc cgacatcgaa accatcggca
    23881 ccgaattggc gcttgccgac ttggcaagtg tggaaaaagc catcgtccgc gaagaaaaac
    23941 gcgcccgatc aggcgacaaa gacgcgcaaa aactagtcga tttgtgcaaa aaactgctgc
    24001 cgcatctgga cgaaggcaaa cccgtgcgtt ccttcggttt ggacgcggaa gaacgcgcgc
    24061 tgctgaagcc gctgttcctg ctgaccgcca aacctgcgat gtatgtggga aacgttgccg
    24121 aagacggttt tgaaaacaac ccgcacctcg accgcctgaa agaattggcg gcaaaagaaa
    24181 acgcccccgt cgttgccgtc tgcgccgcga tggagagcga aatcgccgaa ttggaagacg
    24241 gtgaaaaagc cgaatttctt gccgaaatgg gcttggaaga accgggcttg aaccgcctca
    24301 tccgcgcggg ttacgacctt ttgggactgc aaacctactt caccgccggc gtgaaagaag
    24361 tccgcgcgtg gacgatacac aaaggcgaca ccgcgccgca agccgccggc gtgatccata
    24421 cggattttga acgcggcttc atccgcgccc aagtgattgc ctacgatgat tttgtctcgc
    24481 tcggcggcga agccaaagcc aaagaagccg gcaaaatgcg cgtggaaggc aaggaatacg
    24541 tcgtgcagga cggcgacgtg atgcactttt tgtttaacgt gtaacccaaa tgcggcaggt
    24601 tttcagacgg ctttgccgga aatgccgtct gaagccggtt ttggtggttt tcgacgttcc
    24661 cataccgccg gaatgcagcc gcatcaaaat aaaatccctc ccgcatttcc gatttgccct
    24721 ccccgattcc tgcaaaacaa accgcctgcc ctgccgttac gggaagccgt ccggtattcc
    24781 gaatatcccg aaccccgata caaaatgacc tttcagacgg catttgcaca gcccgccgcg
    24841 tttcaagtaa aaacattatg agccaagcct taccctaccg cccggacatc gacacattgc
    24901 gcgccgccgc cgtcttgtcc gtcatcgtgt tccatatcga aaaggattgg ctgccgggcg
    24961 ggtttctcgg tgtcgatata ttctttgtga tttcaggctt tttgatgacg gcgatcctcc
    25021 ttcgcgaaat gtccgggggg cgtttcttcc tcaagacatt ttatatccgc cgcatcaaac
    25081 ggattttgcc cgcatttttc gccgtattgg cggcaacgct ggcaggcggc ttctttttat
    25141 tcaccaaaga tgatttcttt cttttgtgga aatccgcgct gaccgccttg ggtttcgcct
    25201 ccaacctgta ttttgcaagg gggaaggatt atttcgatcc cgcgcaggaa gaaaagcccc
    25261 tgctgcacat ctggtctttg tcggtcgaag aacaatttta ctttgtcttt ccgatattgc
    25321 tgttgcttgt cgcccgcaaa agcctgcgcg tacagttcgg cttcctcgcc gcattgtgcg
    25381 ccttaagcct tgccgcttcc tttatgcctt ccgcgctcga taaatattac ctgccccacc
    25441 tgcgcgcctg cgaaatgctg gtcggatcgc tgaccgccgt gcggatgcgg taccggcaac
    25501 agcggaatcc cgccgtcggg aaacggtatg ccgccgtcgg cgcattgttt tccgcgtgca
    25561 tactgtccgc ctgcctgttt gcctattcgg aacaaaccgc ctatttcccg ggccccgccg
    25621 ctttgattcc ctgtctggct gttgccgcgc tgatttattt caaccattac gaacacccgc
    25681 ttaaaaaatt tttccaatgg aaaatcaccg ttgccgccgg tttgatttcc tattcgcttt
    25741 atctgtggca ttggccgata ttggccttta tgcgctatat cggcccggac aacctgccgc
    25801 cttattcgcc ggcggcagcg atcgtcctga ccctggcgtt ttccctgatt tcttatcact
    25861 gcatcgaaaa gccgtttaaa aaatggaaag gctcgttcgc acaatccgtt ttatggattt
    25921 atgccttgcc tatgctcgtt ttgggcgcgg gctcgttttt cgcgatgagg ctgccgttta
    25981 tggcgcaata cgaccgcttg gggctgacgc gttccaacac ctcctgccac aacaataccg
    26041 gcaaacaatg cctgtggggg gatacggaaa aacagccgga actgctggtt ttgggcgact
    26101 cccacgccga ccattacaaa acattcttcg atgccgtggg caaaaaagaa aaatggtccg
    26161 ccactatggt ttccgccgac gcctgcgcct atgtggaagg ctacgcgtcc cgtgtgttcc
    26221 aaaactgggc cgcctgccgc gccgtttacc gctatgccga agaacacctg ccccggtatc
    26281 cgaaagtggt tttggcgatg cgctggggca gccagatgcc cgaaaacagc cgctcccttg
    26341 cctacgatgc cggttttttc caaaaattcg accgtatgct gcacaaactc tcatccgaaa
    26401 aacaagccgt ttacctgatg gcggacaact tggcttcgtc ttacaacgtc cagcgcgcct
    26461 atatcttgtc ttcacgcata ccgggttgcc gccaaacact gcgcccggac gacgaaagca
    26521 ccctgaaagc caatgcccgc atcagggaat tggcagccaa ataccccaac gtctatatta
    26581 ttgatgccgc cgcctatatc cccgcagatt tccaaatcgg cggattgccg gtttactcgg
    26641 acaaagacca catcaaccct tacggcggca cagaattggc gaagcgtttt tccgaaaaac
    26701 aaaggtttct cgatacgcgc cataaccatt gattcgctta aatttgttac aatcggcggt
    26761 ttgcaaaacc gctaattttt ttgaaagaga ccgatgagcg tcatccaaga cctgcaatcg
    26821 cgcggcctta tcgcgcaaac caccgacatc gaagccttag acgctttgct gaacgaacaa
    26881 aaaatcgccc tttactgcgg tttcgacccg acagccgaca gcctgcacat cggacacctg
    26941 ctgcccgtat tggcattgcg ccgcttccaa caggcggggc atacgccgat tgcactggtg
    27001 ggcggcgcga ccggtatgat cggcgacccc agcttcaaag ccgccgaacg cagcttgaat
    27061 tccgccgaaa ccgttgccgg ctgggtagga agcatacgca gccaattaac ccctttcttg
    27121 agctttgaag gcggaaacgc cgccattatg gcgaacaatg ccgactggtt cggcagcatg
    27181 aactgcctcg acttcctgcg cgacatcggc aagcatttct ccgtcaacgc catgctgaac
    27241 aaagaatccg tcaaacagcg catcgaccgc gacggcgcag gcatttcctt taccgagttc
    27301 gcctattccc tgctgcaagg ctacgacttc gccgagttga acaaacgcca cggcgcggtt
    27361 ttggaaatcg gcggttccga ccagtggggc aacatcaccg ccggtatcga cctgacccgc
    27421 cgcctgaacc aaaaacaagt gttcggtctg accctgcctt tggttaccaa atccgacggt
    27481 accaaattcg gcaaaaccga aggcggcgcg gtgtggctga acgcgaaaaa aacctcgccg
    27541 taccagttct accagttctg gctgaaagtc gccgatgccg atgtgtataa attcctgaaa
    27601 tactttacct tcctgtccat cgaagaaatc ggtgtcgtcg aagccaaaga caaggcaagc
    27661 ggcagcaagc ccgaagcgca acgcatcctc gccgaagaaa tgacccgcct gattcacggc
    27721 gaagaagccc ttgccgccgc gcaacgcatt tccgaaagcc tgtttgccga agaccaaagc
    27781 cggcttaccg aaagcgactt cgagcagctc gccctcgacg gcctgcctgc atttgaagtt
    27841 tcagacggca tcaacgccgt cgaagccttg gtcaaaaccg gcttggcagc gtccaacaaa
    27901 gaagcgcgcg gctttgtcaa tgccaaagcg gttctgctca acggcaaacc ggctgaagcc
    27961 aacaacccca accacgccgc cgaacgcccc gacgatgcct atctgttgat aggcgaatac
    28021 aaacgtttcg gcaaatacac catcctccgg cgcggcaaac gcaaccacgc gcttttggtt
    28081 tggaaataat ccgattgccg cagaaatgcc gtctgaagct ttcagacggc atttttatca
    28141 aatgcaaaac accctgcgcc tgccgatatg tcgtcatttc catgcaggcg ggaattcaaa
    28201 cttgtccgca cggaaactta tcgggcaaaa cggtttcttc agttctacgt tctagatgcc
    28261 cgctttcgtg ggaatgacgg ttcagttgct acggttactg tcaggtttcg gttatgttgg
    28321 aatttcggga aacttatgaa ttgtcattcc cgcgaaagtg ggaatccagg actcaaaatc
    28381 tcaagaaacc gttttgcccg ataagttcct gcactgacag atctagattc ccgcctgcgc
    28441 gggaatgacg aatttcgaga ttacggtgtt gtcgggaatg acgggtttca agattacggt
    28501 gttgtcggaa cgcaaccgaa ccgtcattcc cgcgaaagtg ggaatccagg actgaaaatc
    28561 tcaagaaacc gttttgcccg ataagttcct gcactgacag atctagattc ccgcctgcgc
    28621 gggaatgacg ggttttaaga ttgcggtgtt gtcgggaatg acggttcggg tattttactg
    28681 cgcccgcccc gcgcccgtaa acggcgggcg attaaaaatg ccgtctgaag gttcagacgg
    28741 catcggaatc ggggaatcag aagcggtagc gcacgcccaa tgaggcttcg tgggttttga
    28801 agcgggtgtt ttccaggcgt ccccagttgt ggtagcggta gccggcgtcc agggtcaggt
    28861 tgggcgtgat gtcgaaaccg acaccggcga tgacaccgag gcctacgcgg cggatgctgt
    28921 tgctttcttg atgggcgtct tgcgtatttt tgtaaggaga ataaaccgta ggtgctgcgc
    28981 cacgagcacc ggcggtggta agaaaccctg ttgttttttt ggtcgaatcg atgctgtgtc
    29041 tgacgtgtcc gtaggcgacg cgcgcgccga tatagggttt gaagcgggaa ccggtatcga
    29101 aatcgtaaat ggttgacaaa ccgagcgagg aggcggcgtg gaacgtaccg ttttcctgat
    29161 gttccgtctt tcgggtttgt atgttaagat agcggccgct agaagaggta ccatcgtttc
    29221 ttagcacctc ttttgtgttg acggaatatt tattgttgtt ccactttctg taacgggcat
    29281 aatctgccgc tatcctccag ccgccgaagt cgtagccgac cgacaccctg gggtggatgg
    29341 aatgcgtacg gatgtttctg aaataatcgc ttaccgtgct tatttttttg cctttttttg
    29401 taccg
//
LOCUS       DAXGCP010000016        27290 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.016, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000016 DAXGCP010000000
VERSION     DAXGCP010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27290
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.016"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            236..1963
                     /gene="ilvB"
                     /locus_tag="ACFJCW_000620"
     CDS             236..1963
                     /gene="ilvB"
                     /locus_tag="ACFJCW_000620"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HFC4150835.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELVETIKKAFQIAASGRPGPVVLDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNILSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDNKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRTDGKA"
     gene            1974..2465
                     /gene="ilvN"
                     /locus_tag="ACFJCW_000621"
     CDS             1974..2465
                     /gene="ilvN"
                     /locus_tag="ACFJCW_000621"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HFC4150836.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2532..2825
                     /locus_tag="ACFJCW_000622"
     CDS             2532..2825
                     /locus_tag="ACFJCW_000622"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HFC4150837.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYNLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAV"
     gene            2905..3918
                     /gene="ilvC"
                     /locus_tag="ACFJCW_000623"
     CDS             2905..3918
                     /gene="ilvC"
                     /locus_tag="ACFJCW_000623"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HFC4150838.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRHGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVAANLKEGATL
                     AFAHGFNVHYNQIVPRADLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVAELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGARLRAMMPWITANKLVDQ
                     DKN"
     gene            complement(4037..5032)
                     /locus_tag="ACFJCW_000624"
     CDS             complement(4037..5032)
                     /locus_tag="ACFJCW_000624"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HFC4150839.1"
                     /translation="MNLKNRHFLKLLDFTPEEITTYLDLAAELKDAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGADATYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFAQETVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKGVGFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPAGIVFDQAENRMHTIKAVMVAALGD"
     gene            complement(5174..7759)
                     /gene="acnB"
                     /locus_tag="ACFJCW_000625"
     CDS             complement(5174..7759)
                     /gene="acnB"
                     /locus_tag="ACFJCW_000625"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HFC4150840.1"
                     /translation="MLEAYRKAAAERAALGIPALPLNAQQTADLVELLKNPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLVSPKYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVNILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKVGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVIPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRALERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKSDIPVRLWVAPP
                     TKMDAKELSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTIEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            complement(8074..9144)
                     /gene="lptG"
                     /locus_tag="ACFJCW_000626"
     CDS             complement(8074..9144)
                     /gene="lptG"
                     /locus_tag="ACFJCW_000626"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HFC4150841.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLASLSQLAAGSELAVIKASGMSTKKLLLI
                     LSQFGFIFAIAAVALGEWVAPTLSQKAENIKAAAINGKISTGHTGLWLKEKNSIINVR
                     GMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSIMGTDKIETSA
                     AAEETWPIAVRRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTQIYAIAWWRKLVYP
                     VAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGTPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            complement(9141..10256)
                     /gene="lptF"
                     /locus_tag="ACFJCW_000627"
     CDS             complement(9141..10256)
                     /gene="lptF"
                     /locus_tag="ACFJCW_000627"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HFC4150842.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRDSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAILIAVMQLWVIPWAELRNREYAEILKQKQELSLVEAGEFNNLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLNLIISTTPKLIDPVSHRRTISTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLIYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVGKSLTLKGGK"
     gene            10245..10427
                     /locus_tag="ACFJCW_000628"
     CDS             10245..10427
                     /locus_tag="ACFJCW_000628"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150843.1"
                     /translation="MINHKIAVRGAVSGSAQADCPRKVSDGASKNGVQSCQPSSDGLL
                     SERPSENYRQPSQSGE"
     gene            10430..11836
                     /locus_tag="ACFJCW_000629"
     CDS             10430..11836
                     /locus_tag="ACFJCW_000629"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HFC4150844.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCADKAPEHNTAAHALFSALEEGQ
                     NFSDTKIPTDNGLQAVAVVRLEKTDRAALNKAAAEAAKWAQNQETVNVDVHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFSQAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSVED
                     PYLVELSYFGAADKEAAPVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAIVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEGYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLMNYLRNL"
     gene            11899..12339
                     /locus_tag="ACFJCW_000630"
     CDS             11899..12339
                     /locus_tag="ACFJCW_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HFC4150845.1"
                     /translation="MPKVTFYTHVDQIPLFTCRLIARAIRDGGRILVWSDSFGRLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSDTSVLLACGGNLPRIPEGMAVLNLSDGFWNTA
                     SVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            12599..13417
                     /locus_tag="ACFJCW_000631"
     CDS             12599..13417
                     /locus_tag="ACFJCW_000631"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HFC4150846.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASAAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTDAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGK
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGPATFPLSQVIPGWTEGVRLLKEGGEA
                     TFYIPSNLAYREQGAGEKIGPNATLVFDVKLVKIGAPENAPAKQPDQVDIKKVN"
     gene            13524..14150
                     /gene="purN"
                     /locus_tag="ACFJCW_000632"
     CDS             13524..14150
                     /gene="purN"
                     /locus_tag="ACFJCW_000632"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HFC4150847.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGQIVSQGIVPILDGDTA
                     DDVAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            14166..14837
                     /locus_tag="ACFJCW_000633"
     CDS             14166..14837
                     /locus_tag="ACFJCW_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HFC4150848.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAARLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPAYYKDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVRRGDDTVTYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     QAAKP"
     gene            14955..15377
                     /locus_tag="ACFJCW_000634"
     CDS             14955..15377
                     /locus_tag="ACFJCW_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HFC4150849.1"
                     /translation="MQVTSKWIDGMCFVGTAEGGHSVVMEGSAAEGAAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVIGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGAEK"
     gene            15898..16614
                     /locus_tag="ACFJCW_000635"
     CDS             15898..16614
                     /locus_tag="ACFJCW_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HFC4150850.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILAGLPDLETRLKPLYAMIRCEEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREKKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            16763..17665
                     /locus_tag="ACFJCW_000636"
     CDS             16763..17665
                     /locus_tag="ACFJCW_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HFC4150851.1"
                     /translation="MSSLMTLFSVLVPMFAGFFIRVPKPYLPASDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLGDMALTVLWLFVCTVGANLLALAVLGKLSPWRIGGKGKGVSVG
                     VSGSVRQLGCVLIGFVSGKLMCDIWMPSENAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     LNRRGIRLSVWFILSSLSGGLLFAASADGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSTLG"
     gene            17708..18482
                     /locus_tag="ACFJCW_000637"
                     /pseudo
     CDS             17708..18482
                     /locus_tag="ACFJCW_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
     gene            18594..20282
                     /locus_tag="ACFJCW_000638"
     CDS             18594..20282
                     /locus_tag="ACFJCW_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HFC4150852.1"
                     /translation="MLNKDQFADNHFIRTIIEDDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     DYFDRLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSIEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMAAGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGVRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFQAGKTQSRRAAFHPNHEEMGDREVPVSQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCGEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPGAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRQDHGKDTPVFNRTVTLKDSWQPK"
     gene            20374..21330
                     /gene="gshB"
                     /locus_tag="ACFJCW_000639"
     CDS             20374..21330
                     /gene="gshB"
                     /locus_tag="ACFJCW_000639"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HFC4150853.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     NGGLVTAQASAFEFSGAKNDDDHEWFKAADKVQTALKAFDAVIMRTDPPFDMQYLYST
                     QLLTLAEQQGAKVFNSGRAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IVKPLDGMGGMGIFRLTEKDPNIGSILETLMRFDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELDGRDREIAETLAPELKRSGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKSFDVAAMFADAVAAWSVR"
     gene            21489..21872
                     /locus_tag="ACFJCW_000640"
     CDS             21489..21872
                     /locus_tag="ACFJCW_000640"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HFC4150854.1"
                     /translation="MEPSSYAAEKKGKSGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNALLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLVAMLMLAAVWLSALFG"
     gene            22004..22477
                     /locus_tag="ACFJCW_000641"
     CDS             22004..22477
                     /locus_tag="ACFJCW_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HFC4150855.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKMGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            22602..23705
                     /gene="mnmA"
                     /locus_tag="ACFJCW_000642"
     CDS             22602..23705
                     /gene="mnmA"
                     /locus_tag="ACFJCW_000642"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HFC4150856.1"
                     /translation="MNTTSNTSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWEN
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFNLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTIGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELCYLDDETAELVFDEPQW
                     AVTPGQSAVLYDVDICLGGGIIQTTDKPVIITR"
     gene            23776..25446
                     /locus_tag="ACFJCW_000643"
     CDS             23776..25446
                     /locus_tag="ACFJCW_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HFC4150857.1"
                     /translation="MEKIWLESYEKGVSAEIDITQYNSVSDVFRQSVEKFARLPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMMPNVLQYPIALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETVSFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVARGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIVLIANPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVPSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDACGFLETGDIAVMDEKGRLK
                     LVDRKKDLVVVSGFNVYPNEIEEFIAHHEKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELTAFCRTGLTAYKVPKDIEFRDELPKSNVGKILRRELRQSAGK"
     gene            25558..27192
                     /locus_tag="ACFJCW_000644"
     CDS             25558..27192
                     /locus_tag="ACFJCW_000644"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HFC4150858.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRKMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAVKNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NKGDVSVLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAVKIYGSGHIRERHRHRYEVNNNYVSALEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
BASE COUNT         6570 a         7162 c         7425 g         6133 t
ORIGIN      
        1 tttcaaaaaa tattaaaaga tgaaagattt ttcttgattg aactgtcggt ttgcgttatc
       61 gtttttactc tttttcacaa actctgtgtt cctttccaat tgattggata atctgtctgt
      121 tgccgtgttc ccccaatgcg cgtaccctaa atcgctgctt ggtggaattg cattacaggt
      181 gctgtggcaa agcggtttgt ccctattggt ttgaaaccgt ataaaagagg tcgttatgca
      241 gttatcaggc gcgcaaatca tagtgcagag tctcaaagcc gaaggcgtcg agtacgtttt
      301 cggttatccc ggcggtgcgg ttatcgaaat ctacgatgcc ctgttccaac tcaataaatt
      361 caaacacatt cttacccgcc atgagcaggc ggcagtacac gcggcagatg cgtatgcgcg
      421 cgtcagcggt aaggtgggcg tggcattggt tacatccggc ccgggcgtta ccaatgcgct
      481 gaccggtatt gctactgcct atacggattc gattccgatg gtggtcatca gcggacaggt
      541 aggcaattcc ctgattggta cggatgcgtt ccaagaagtt gatacggtgg gtattacccg
      601 tccgtgcgtc aaacacaatt tcttggttac ggacatcaat gagttggtgg aaaccattaa
      661 aaaggcgttc caaattgccg caagcggccg accggggccc gtggtgcttg atgtcccgaa
      721 agatgttacg caggcgatgg cgaaattcag ctatcctcag gaagacattt ttatccgttc
      781 gtatcaaccg gttgttcaag ggcatatcgg tcagattaaa aaggccgtgc agatgttggc
      841 atctgccaaa cgcccggtcg tctattttgg cggcggcgtg gtgttgggta atgcttctga
      901 agagctgacc cgatttgtcc gaatgacggg tgctccgtgc acgggtacgc tgatgggctt
      961 gggcgcttat ccttccggcg accgccaatt cctcggtatg ctcggtatgc acggtactta
     1021 cgaggcaaac cttgccatgc agaatgcgga tgtcgttctt gccgtaggtg cgcgttttga
     1081 cgaccgtgtg gtttccgtac cgtccaaatt tttcgagaag gcgaagaagg ttatccatat
     1141 cgatgtcgat ccttccagca tcgccaaacg cgtgaaggcg gacattccga ttgtcggcga
     1201 cgtgaaaaac attttgtccg agatggttgc gctgtggcaa aaacaagagt ccgtgccgtc
     1261 tgaagatgct ttgggcaaat ggtggaaaac catagaggaa tggcgttccc gcgattgctt
     1321 gtggtttgac aacggcagcg aaattatcaa gccccaatat gtgattcaga agcttgccga
     1381 gattaccggc aattcggcaa tcatcacatc ggatgtaggg cagcatcaaa tgtttgcggc
     1441 tcaatattat cctttcgaac gtccgcgcca atggctcaac tccggcggtt tgggtacgat
     1501 gggcgtgggt ctgccttatg cgattggtgc aaaacttgcc gccccggatc aagacgtatt
     1561 ctgtattacc ggcgacggct cgatccagat gaacatccaa gagttgtcca cctgtttcca
     1621 atatcggatt ccggttaacg tcattacgct gaacaacggt tatctgggta tggtacgcca
     1681 gtggcaggaa atatattacg gcggtcgaga gtcggaaacc tatttcgatt ctttgcccga
     1741 tttcgtcaaa cttgccgagg catacggcca tatcggcatc cgcgtggaca ataaatctga
     1801 tgtggaaggt gccttgttgg aagcattgaa ccaaaaagac aggctggtgt ttatcgactt
     1861 cctgaccgac cagaaacaga atgtgatgcc tatggtcggc aacggcaaag gtttggacga
     1921 aatggtactt ccgccgcata tgcgtacgga cggaaaggcg taaggagagg caaatgcgac
     1981 atatcttatc tgttctgatc gaaaacgaat caggtgcgat gagccgcgtg gtcggtttgt
     2041 tctctgcacg cgattacaat atcgattctt tggcggttgc gccgaccgaa gacaaaaccc
     2101 tgtcacggat gaccatcgtt acccacggcg acgagcaggt tatcgaacaa atcaccaagc
     2161 aactcaataa attgattgaa gtgattaaag tggtcgattt gaacgaaagc cgttttgtcg
     2221 aacgcgaact gatgttggta aaagtccgtg ccgccggcaa agaccgcgac gaatttttac
     2281 gcttgaccga aatctaccgg ggcagcatca tcgacgtaac cgaccgcagc tatacgattg
     2341 aaattaccgg ctcgaccgac aagctggatt cctttttgga aacggtcgga cgcgcccaaa
     2401 ttttggaaac cgtacgtaca ggtgcggccg gcatcggtcg cggtgagcgt attttgaaaa
     2461 tttaacgccg taacctttca gacggcatgg tatttgaatg ccgtctgaaa aacgaacggc
     2521 aggagagatt tatgtcgaac attaaaattg tcgcactggt taccgtcaaa ccggaataca
     2581 cggaaacact ggcagcacag tttaaagaac tggtcaaagc cagccgtgcg gaagagggca
     2641 acatcagcta caatctccat caggaaatcg gcaaaccgaa ccgttttgtt ttcgtggaaa
     2701 attggaaatc ccaagcagct attgacgaac ataatgccag cgcgcatttc caagccttcg
     2761 tccagtccgt cgacggcaaa accgaagcgt tggaaatcgt attgatgaat gaagttgccg
     2821 tttaagcggc acactctgtt taacccgtcc gaagccgctc aacattttaa ggcttcgaca
     2881 accatttacc ttaaaggaaa tcaaatgcaa gtctattacg ataaagatgc cgatctgtcc
     2941 ctgatcaaag gcaaaaccgt tgccatcatc ggttacggtt cgcaaggtca tgcccatgct
     3001 gccaacctga aagattcggg tgtaaacgtg gtgatcggtc tgcgccacgg ctcttcttgg
     3061 aaaaaagccg aagcagccgg ccatgttgtt aaaaccgttg ctgaagcgac caaagaagcc
     3121 gatgtcgtta tgctgctgct gcctgacgaa accatgcctg ccgtctatca cgccgaagtt
     3181 gcagccaatt tgaaagaagg cgcgacgctg gcatttgcac acggcttcaa cgtgcactac
     3241 aaccaaatcg ttccgcgtgc cgacttggac gtgattatgg ttgcccccaa aggtccgggt
     3301 cataccgtac gcagtgaata caaacgcggc ggcggcgtgc cttctctgat tgccgtttac
     3361 caagacaatt ccggcaaggc caaagacatc gccctgtctt atgcggctgc caacggcggc
     3421 accaaaggcg gtgtgattga aaccactttc cgcgaagaaa ccgaaaccga tctgttcggc
     3481 gaacaagccg tattgtgcgg tggcgtggcc gagttgatca aagcaggttt tgaaaccctg
     3541 accgaagccg gttacgcgcc tgaaatggct tacttcgaat gcctgcacga aatgaaactg
     3601 atcgttgacc tgattttcga aggcggtatt gccaatatga actactccat ttccaacaat
     3661 gcggagtacg gcgaatacgt taccggccct gaagtggtca atgcttccag caaagaagcc
     3721 atgcgcaatg ccctgaaacg catccaaacc ggcgaatacg caaaaatgtt tatccaagag
     3781 ggtaatgtca actacgcgtc tatgactgcc cgccgccgtt tgaatgccga ccaccaagtt
     3841 gaaaaagtcg gcgcacgact gcgtgccatg atgccttgga ttacggccaa caaattggtt
     3901 gaccaagaca aaaactgatt gttttcaaac gggactgcct acacatcgtg taggcagttt
     3961 gttatatgga taccgtctga acatcgtgtt cggacggtat ctgtgttgcg gatgaattta
     4021 aacaggcaca gttctgtcag tcgcccagag ccgcgaccat taccgcttta atcgtgtgca
     4081 tacggttttc cgcctgatcg aacacgatgc cggccggact ttcgaatact tcttctgtaa
     4141 cttccacacc gttcagcccg aaggtttcgt aaatccattc gccgactttg gtttcgcggt
     4201 tgtggaaggc gggcaggcag tgcatgaatt tgacttgcgg attgcccgat gccgccatca
     4261 gttcgggcgt aacgcggtaa tctttcagca aatcgatgcg ttcctgccag acttctttcg
     4321 gctcgcccat gctgacccat acgtcagtat gaatgaaacc gacacctttg acggcttcat
     4381 gcgcgttttc ggtcagggta atttttgcac cggtttcttt ggcggcggcg tgtgcggcgg
     4441 cgataatgcc ttcagacggc cacaggcttt gaggtgcgcc gatacgcacg tccatcccca
     4501 attttgcccc taaaatcagc agggaattgc ccatgttgta acgcgcgtcg ccgacgtagg
     4561 caaacgcggt ttggttcaaa ggtttgccgc tgtgttcgcg catagtcagt gcgtcggcaa
     4621 gcatttgtgt gggatggaac tcgttggtca gcccgttgaa cacgggtacg cccgcatatt
     4681 ttgccaattc ttcgacagtt tcctgagcga agccgcgata ttcgatggca tcgtacattc
     4741 tgcctaagac gcgcgccgtg tctttgatgc tttctttgtg cccgatttgg ctggcggacg
     4801 gttccagata ggttgcatcc gcgccttggt cgcgtgcggc gacttcaaac gcacagcgtg
     4861 tgcgcgtgga tgttttttca aaaatcaggg cgatgttttt ccctttcatc cgctgaatct
     4921 cgcgccctgc ctttttggcg tctttcaact cggcggcaag gtcgaggtag gtggtgattt
     4981 cttccggcgt gaagtccaaa agtttcagaa aatggcggtt tttcaggttc actgtcgttt
     5041 cctttatgtg ggggcgtgaa cgccgtattt gcagcgtttg cggaaagaag ggttagcgga
     5101 atgttgcaat gccgtctgaa ggttgttcag acggcattgc ggtcaatccc ttactccata
     5161 cggatgacgg ggatcaaaca ttcacggtct cggctacttc gttgtagctg tcgatttcgt
     5221 tgaagttcat atagcggtag attttatcgc cctgttcgtt gatgatgccg atattggctt
     5281 gatattcttc aatggtcggg attttaccca gtttggagca aatcgccgcc aactctgccg
     5341 agccgaggta aacgaaggtg tttttaccca agcggttcgg gaagttgcgg gtcgaagtgg
     5401 acatgacagt tgcaccttcg cgtacttggg cttggttacc catacacaac gaacagcccg
     5461 gcatttccat acgcgcgccg gcgcggccga gtacgccgta gtgaccttcg tcggacaact
     5521 ctttcgcgtc cattttggtc ggcggcgcta cccacaggcg gacggggatg tcgctcttgc
     5581 cttccaaaag tttggaggcg gcgcggaagt ggccgatgtt ggtcatacaa gaaccgatga
     5641 acacttcgtc gattttggtg ccggagcgtt cggacataaa gcatacgtcg tccgggtcgt
     5701 tcgggcaggc gataatcggc tctttgatgt cgtccatgtt gatttcaatc acggcggcgt
     5761 attcggcatc tttatccgct tcgagcaact cgggatttgc cagccatttt tccatagctt
     5821 tgatgcggcg ttccaaagcg cgcggatctt gatagccgtt ggcaatcata tttttcatca
     5881 acacgacgtt ggatttcatg tactcgataa tcggctcttt attgagcttc acggtacagc
     5941 cggcggcgga gcgttcggcg gatgcgtcgg tcaattcaaa ggcttgttcc actttcaaat
     6001 cgggcaggcc ttcgatttcg aggatgcggc cggagaagat gtttttctta ccggctttgg
     6061 caacggtcag caaaccttgt ttaatcgcgt aaagcgggat ggcgttcacc aaatcgcgca
     6121 gggttacgcc cggttgcagc ttgccgctga aacgtaccaa tacggactcg ggcatatcga
     6181 gcggtattac gcccgttgcg gcggcaaaag cgaccaagcc tgaacctgcg gggaaggaaa
     6241 taccgatggg gaaacgggtg tggctgtcgc cgcctgtacc gactgtatca ggcaacagca
     6301 ggcggttgag ccacgagtgg atgacgccgt cgcccggacg cagggacacg ccgccacggg
     6361 tagaaataaa ggcgggcagt tctttatggg tttttacatc gacaggtttc ggataggcag
     6421 cggtgtggca gaaagactgc atcaccatat cggcggagaa gcccaaacaa gccaagtctt
     6481 tcaactcgtc gcgggtcatc ggcccggtcg tatcttgcga gccgaccgtc gtcatgcgcg
     6541 gttcgcagta agtacccgga cgcacgcctt gtccttcggg cagaccgcag gcgcgaccga
     6601 ccattttttg cgccaaggtg aaaccgactt tgctttcggc aggcgcttgc ggcaggcgga
     6661 atgcagtaga ggcaggcagt ttcagggctt cgcgcgcttt ggcggtcaga ccgcgaccga
     6721 taatcaggtt gatacggccg ccggcttgca cttcgtccag caatacttgt gatttcaatt
     6781 caaactcggc aacagtctcg ccgtttttca cgattttacc ttcataagga aggatattga
     6841 cgacatcgcc cattttcagc gcggaaacat cgacttcaat cggcagcgcg ccggagtctt
     6901 cttgagtgtt gaagaaaatc ggcgcgattt taccgcccaa gcacacgccg ccgaagcgtt
     6961 tgttcggcac gaacgggatg tcttcgccgg tatgccaaat gacggagttg gtcgcggatt
     7021 tgcgtgaaga accggtaccg accacgtcac cgacgtaggc aaccggatgg cctttggctt
     7081 tgagttcttc caacaattta atcggaccga cttcgcccgg tttgtcgggc gtgatgccgt
     7141 cgcgcgggtt tttcagcatg gccagcgcgt gcagcggaat atcgggacga ctccacgcgt
     7201 cgggcgcggg agagaggtcg tctgtattgg tttcgccgtc aactttgaag acggtaacgg
     7261 tgattttttc gggaactttg gcacgggagg cgaaccattc ggcatctgcc caagattgca
     7321 aaacttcctg cgcgtatttg ttgccttttt cggctttttc ctgaacgtcg tggaaggaat
     7381 cgaacatcag aagcgtatgt ttcaagcctt tggcggcaat gggcgcgagt ttgtcgtcgt
     7441 ccaagagttc gattaaggcg tggatattgt aaccgccgag catcgtacct aagagttcgg
     7501 tcgcatattt gggggaaacc agcgggctgg atgcgctgcc ttcggcaacg gcagccagga
     7561 atgaggcttt aactttggcg gcatcgtcca caccgggcgg aacacggtgg gcaagcagct
     7621 cgaccaagaa ctcgccttcg cctgcgggcg ggtttttcag cagctcaacc aaatcggcgg
     7681 tttgctgcgc attcaaaggg agggcgggaa tgccgagggc ggcgcgctcg gcggcggctt
     7741 tacgataggc ttctaacatc tctttgttcc tttttccgtt tttcttttgt cgggttgcaa
     7801 atgatctgcg ttaaatattg taaacaacat ttgtaccgct atcatagact agttttaaca
     7861 aaaatggaac tgttatgaca ggtaatgtat agtggattaa atttaaatca ggacaaggcg
     7921 gcgaagccgc agacagtaca aatagtacgg caaggcgagg caacgccgta ccggtttaaa
     7981 tttaatccac tataataggg aacggctata tgtctgcggg aatgtgtcaa tgaaaacaaa
     8041 tgccgtctga agagaggttc ggacggcatt tgttcaacgt ttttcctgtt tgcgtatcag
     8101 ccaaacagcg agcaaggcga aggctatggt aggcagtgcg ccggcgagga agggtggggt
     8161 gccgtagagt tggctggtaa acccgaagag cctgccggca aggtggaaca gcaatccgag
     8221 acagatgccg ccgaagagtt ttaagcccat attgccgtgg cgcgtggttt gcggcgtaaa
     8281 ggcgaaggca acgagcgcca tgacccatgc ggcgacgggg taaacgagtt tacgccacca
     8341 tgcgatggcg tagatttggg tgttttggct gttgttttgg aggtggcgga tgtaggtggt
     8401 cagctcgccg acggacattt ggtcgggctt gacgagcaat acgtccatca ggttgcgtct
     8461 gacggcaatc ggccaagttt cttcggcggc ggcggatgtt tcgattttgt ctgtacccat
     8521 gatgctgcgg cggatgtttt tcaactgcca gctgccgtcg ctgttcaaaa cggcggaatc
     8581 ggcttccact gcctctgcca attcgttttt atcgttgcgc gcccaaattt tgatgcccaa
     8641 aagcgtatgg tcgggcaaca ttccgcgcac attgataatg ctgttttttt ctttcagcca
     8701 aaggccggta tggccggtgc tgattttgcc gttaatggcg gcggctttga tgttttcggc
     8761 tttttggctc agcgtgggcg caacccattc gccgagcgcg acggcggcaa tagcaaaaat
     8821 aaaaccgaac tgagacagaa tcaacagcag ctttttggtg ctcatgccgc tggctttgat
     8881 gacggccagt tcgctgccgg cggcaagctg gctgagagag gccagtccgc cgatgaggac
     8941 ggcgaggggc atgagttcgt aggcgcgggc gggcattttg agggcggtgt agcccagcat
     9001 ttcccatatg ccgtaactgc ctttgccgag gttgccggtt tcgtacagga tttcaaaaaa
     9061 gctgtacaaa gcgaggaagg caaggagcgc gtaaaccgcc ataaccgcca tttggcggat
     9121 gatgtaacgt gaaatcaggt tcattttccg cctttcaatg tcagactttt gccaaccgcc
     9181 tgccagaagg gctggctggg catactgcgg acgcgcagaa gtacgattgc gatgacgaac
     9241 atgatgatgt gcataggcag cagtccgagc caaaaatgga ttttgccgtc ttccacggct
     9301 tcaaaaagca gggtcagccc gttttggtaa attaaaaaca aaccgatggc aatcaagata
     9361 ttgtaggtat gtccgctgcg cgggttgaaa taggaaagcg gcacggcgag taggcagagc
     9421 aggaggacgc tgacggtcag cgagatgcgc cacatcaatt ctgcctgatg ttgcggattg
     9481 ctgctgccaa tcagttgggc ggtcgaaatg gtgcggcggt gggaaacggg gtcgataagt
     9541 ttgggcgtgg tgctgataat caggttgagt ttttggaagg aaacctgatt gtagtcggcg
     9601 cgtccgggcg tgccgctgta acggtagccg tggcgcaatt cgagcgtgcg tttgttgtcg
     9661 ttcagcgaga agttaccttc tttggcgaag atgatgttgt cgccgccgtt tttgtcctgt
     9721 tcgcgcagga acaggttttt catgatgccg gattcggtgt caaaggtttc gacgaaataa
     9781 accctgccgt tgcgcttgcc caagttattg aactcgccgg cttccaccaa agacaattcc
     9841 tgcttctgct tcaaaatttc ggcatattcg cggttgcgca gttccgccca cggtatcacc
     9901 caaagctgca tgacggcaat caggatggca aacggcacgg caaactgcat gacggggcgt
     9961 atccactgtt tcaacgccaa tccgcaggat agccagaccg acatttcgct gtcgcgccag
    10021 tagcgggtca atacggtcag cgtgctgatg aatgcggtca acaccagcaa aagcggggtc
    10081 ataccgatga cccagaagcc gactaaggcc aacacggcat cgatggcgac acgcccgtca
    10141 gctgcgcggc caagcaggtt gatcgcctgc gtggacacca acaccgccaa gaggacgacg
    10201 aaaatgccga cggcggtaaa agagagttct ttgatgaggt ttctttgata aatcataaaa
    10261 tcgcggtcag gggggcggta agcggttcgg cgcaggcgga ttgtccgcgc aaggtttcag
    10321 acggtgcttc aaaaaatggg gtacaatcgt gccagccgtc ttcagacggt cttttgagcg
    10381 aaaggccgtc tgaaaactac cgacaaccgt ctcaatcagg agaataaacg tggaatttag
    10441 cacaaaaacc gaaatcttgc aggaacagca ggcaggcgcg cagttatttg tctgtgccga
    10501 caaagcaccc gagcacaaca ccgccgcaca tgcgctcttc tctgctttgg aagagggtca
    10561 gaatttttcc gacaccaaaa tcccgacgga caacggtttg caggcagtcg ccgtcgtccg
    10621 cctcgaaaaa accgaccgcg ccgcgctgaa caaagccgcc gccgaagccg ccaaatgggc
    10681 gcaaaatcaa gaaacggtca atgtggacgt tcacgccttt gatgaggcgc aagcagcagc
    10741 cgttgccgaa gcttttgcca tcgcgttcgg caacgctgca tatcgtttcg accgctacaa
    10801 aaaagaagcc aagcccgcca aattttcgca agccgtgttc cacagcgcac acgaagccgc
    10861 cgtcaaagaa gccctgcgcg ttgccgaagc acaagtttac ggacaaagcc tctgccgcga
    10921 cttaggcaat gccgcaccga acgaatgcac gcctgagttc ctcgcgcgta ccgccaaagc
    10981 cgaagccgag aaactgggcg cgcacgccaa aatcatcgaa aaagactaca tcaaagaaaa
    11041 catgggttcg ttttggtcgg ttgccaaagg cagcgtcgaa gacccatatt tggttgaact
    11101 gagctatttc ggtgcggccg acaaagaagc cgcgcctgtg gtattggtcg gcaaaggcat
    11161 taccttcgac accggcggca tttccctcaa acccggcctg aacatggacg aaatgaagtt
    11221 tgacatgtgc ggcgcggcaa ccgtcatcag caccttctgc gccgccgtca aactgcaact
    11281 gccgatcaat ctgattgcca tcgtcgccac ttgtgaaaac atgccttccg gtgcagccaa
    11341 caaaccgggc gatgttgtga aaagtatgaa agggctgacg attgaagtgt tgaacaccga
    11401 tgccgaaggc cgtctgattt tgtgcgacgc gctcacttac gccgagcagt tcaaacccaa
    11461 agccgtcatc gatgtcgcca ccctgaccgg cgcgtgcatc gtcgccttgg ggcacgatgt
    11521 cagcggcgtg atgggcaata atcaggattt gatcgacagc ctgcttgccg cttcctacaa
    11581 cgtggacgac aaagcgtggc aactgccgct ctttgaaacc tacaaagacc agctcaaatc
    11641 caactttgcc gacatcccca atatcggcac gcccggcgcg ggcacgatta ccgccgcaac
    11701 attcctgtcc tatttcaccg aaggctaccc gtgggcgcac cttgacatcg cgggtacggc
    11761 gtggaaatcc ggagcggaaa aaggtgcgac cggccgcccc gtaccgctgc tgatgaacta
    11821 tctgcggaat ctttaatttt gccacaatgc cgtctgaagc ttttcagacg gcatcatcct
    11881 gtcaaatgct caaacaatat gccgaaagtt accttttata cccatgttga ccaaatcccc
    11941 ctttttacct gtcggttgat tgcgcgcgct atccgagacg gcggcaggat actggtgtgg
    12001 tccgactcgt tcgggcggct tcaggaattg gacaaaatgc tttggcaata cgaggccgag
    12061 agttttattc cgcacgaaat ttgggaaacg gaagaagcca tgccgtctga cacatccgtc
    12121 ctgcttgcct gcggcggcaa tctgccccga attcccgaag gcatggccgt tttgaacctg
    12181 tccgacggtt tttggaacac cgcttcggtc ttgcccgcgc gcgttttgga aatcgtcggc
    12241 aacagcctgg aagatctcgc cgacgcgcgc gaacgcttta ccgcctaccg ccgaagcggt
    12301 tttgccatcg aacatcacgg catggagggc aaggcatgaa atgccgtctg aaatgccgca
    12361 tttacaaaat ttaaacaggc ttgattctat ttgattaaaa tttccttatc ggttgaaccc
    12421 cgccacttgg acatctgtcc ttcggggcgg tagaatcaaa ccttattttg gaaggttcaa
    12481 tcccttccaa aacagggcaa cacacagatt gacgctttat gtgccatcct gtgtgttgaa
    12541 acattcaaac tcggctataa tcccgttttt ccgactttat cgacagcgaa gatccatcat
    12601 gaacaccatt ttcaaaatca gcgcactgac cctttccgcc gctttggcgc tttccgcctg
    12661 cggcaaaaaa gaagccgccc ccgcatctgc atccgaacct gccgccgctt ctgccgcgca
    12721 gggcgacacc tcttcaatcg gcagcacgat gcagcaggca agctatgcga tgggcgtgga
    12781 catcggacgc tccctgaaac aaatgaagga acagggcgcg gaaatcgatt tgaaagtctt
    12841 taccgatgcc atgcaggcag tgtatgacgg caaagaaatc aaaatgaccg aagagcaggc
    12901 ccaggaagtg atgatgaaat tcctgcagga gcagcaggct aaagccgtag aaaaacacaa
    12961 ggcggatgcg aaggccaaca aagaaaaagg cgaagccttc ctgaaggaaa atgccgccaa
    13021 agacggcgtg aagaccactg cttccggtct gcagtacaaa atcaccaaac agggtaaagg
    13081 caaacagccg acaaaagacg acatcgttac cgtggaatac gaaggccgcc tgattgacgg
    13141 taccgtattc gacagcagca aagccaacgg cggcccggcc accttccctt tgagccaagt
    13201 gattccgggt tggaccgaag gcgtacggct tctgaaagaa ggcggcgaag ccacgttcta
    13261 catcccgtcc aaccttgcct accgcgaaca gggtgcgggc gaaaaaatcg gtccgaacgc
    13321 cactttggta tttgacgtga aactggtcaa aatcggcgca cccgaaaacg cgcccgccaa
    13381 gcagccggat caagtcgaca tcaaaaaagt aaattaagtc cgaatccatg cccgaaacag
    13441 gttttcgggc atttttacgg caaatgccgt ctgaagccac caaacagcgg ttcagacggc
    13501 atccctttca aaagcgcacc attatgaaaa acatcgtcat cctgatttcc ggacgcggca
    13561 gcaatatgca ggcaatcgtc aatgccgcca ttcccaacgt ccgcattgcc gccgtgttga
    13621 gcaacagcga aacggctgcc ggtttgcaat gggcggccga acgcggcatc ccgaccgaca
    13681 gcctgaatca taaaaacttt gaatcacgac ttgccttcga tacggccatg atggaaaaaa
    13741 tcgacgcata tcaacccgat ttggtggttt tggcaggttt tatgcggatt ctgacccctg
    13801 agttctgcgc ccattacgaa ggcaggctga tgaacatcca tccgtccatc ctgccctcgt
    13861 tcaccgggct tcatacgcac gaacgcgctt tggaagcagg ttgccgcgtt gccggctgta
    13921 cgattcattt cgttacggcc gagctggatt gcggccagat tgtatcgcaa gggattgtgc
    13981 cgatacttga cggcgatacg gcagacgatg ttgccgcccg ggttttggct gtcgaacaca
    14041 aactctatcc gaaagccgtt gccgattttg ccgccggccg cctgattatc gagggaaacc
    14101 gtgtcagaaa ttcggaaaac gccgatgccg cccgtttcct gacggcgtaa accgggcggg
    14161 agcaaatgat gaagactttt aaaaatatat tttccgccgc cattttgtcc gccgccctgc
    14221 cgtgcgcgta tgcggcaagg ctaccccaat ccgccgtgct gcactattcc ggcagctacg
    14281 gcattcccgc cacgatgaca tttgaacgca gcggcaatgc ttacaaaatc gtttcgacga
    14341 ttaaagtgcc gctatacaat atccgtttcg agtccggcgg tacggttgtc ggcaataccc
    14401 tgcaccctgc ctactataaa gacatacgca ggggcaaact gtatgcggaa gccaaattcg
    14461 ccgacggcag cgtaacctac ggcaaagcgg gcgagagcaa aaccgagcaa agccccaagg
    14521 ctatggattt gttcacgctt gcctggcagt tggcggcaaa tgacgcgaaa ctccccccgg
    14581 gtctgaaaat caccaacggc aaaaaacttt attccgtcgg cggcctgaat aaggcgggta
    14641 cgggaaaata cagcataggc ggcgtggaaa ccgaagtcgt caaatatcgg gtgcggcgcg
    14701 gcgacgatac ggtaacgtat ttcttcgcac cgtccctgaa caatattccg gcacaaatcg
    14761 gctataccga cgacggcaaa acctatacgc tgaagctcaa atcggtgcag atcaacggac
    14821 aggccgccaa accgtaaatc ggttttcagg cggttttttg ccgttttgtc catatttctg
    14881 tataagccgc ttgaaattgt ttacaataac gccatatgca aagcggtttt aacgctattt
    14941 tcgggaatga caccatgcag gttacatcaa aatggataga cggaatgtgt tttgtcggca
    15001 cggcggaagg cgggcacagc gtcgttatgg agggatcggc ggcagaaggc gcggccaagc
    15061 gcgggcccag ccctttggaa atgctgctgt tgggggtggc gggctgttcg agcatcgatg
    15121 tggtgatgat tgccgaaaaa cagcgtcaga aagtgactga ctgccgtgcg acggttacgg
    15181 cgaaacgggc ggacgatgcg ccgcgcgtgt ttaccgaaat ccacatccat ttcaaggtaa
    15241 tcgggcatga tttgaaagaa tcggccattg agcgcgccgt tcagatgtct gccgaaaaat
    15301 actgttcggc ttcgattatg ttgggcaaag cggcaaagat tacccacagt tttgaaattg
    15361 ccggggcgga gaaataggca tcgggcggca ttatggggaa acggctgatg ccgtctgaag
    15421 gggaaaggtg cggcaggcaa tccggaggcg catagaaaag cagatatatt cggactgcac
    15481 ctcccgaata tatctgcctg ctgtttcctc tttattcagc ctttataata cttggacttg
    15541 tcggggtatt gtgcaggctt gattccggat tgtcaacaat tttcggtcaa attttaaatg
    15601 ccgcgtttta aaatgatgcc cgcctgattt tgcgggcggg cggaaggcgg gaatcccgtt
    15661 attttaagcc atatattaat ttattgaatt aaaataaatt tgtgcaatat agtggattaa
    15721 caaaaaccag tacggcatta cctcgccttg ccgtactatt tgtactgtct gcggcttcgt
    15781 cgccttgtac tgatttaaat ttaatccact atactttaat ttctcctaca cgatttgaaa
    15841 cacagccgtc ttaaaacatc ttaaaaaatt tgaaagcgta aaaatacgga aaacatcatg
    15901 aactttgaaa acgacgacat tatccatgcg ccgaccacgt cttccctgat tctcgaagag
    15961 cggcacgatt cggagctgtt ccgtgtttac gccctgattt tggacggcat taccgatcag
    16021 gtgctgctgc ccggcaaaaa gctgaccgaa tccgaacttt gccgtcagat ggtgtgttcg
    16081 cgcaacaccg tccgcggcgc gctgtcgctt ttggcgcacg acaagattgt cgatttgcaa
    16141 cccaacaggg gcgcgttcgt ccacgttccc gatttgaaag aaatgcagga tgtgttcaat
    16201 gcgcgcatcg aaatggagac gatgattttg aacatcctcg ccggcctgcc ggatttggaa
    16261 acgcgcctca agccgcttta tgcgatgata aggtgcgaag aagaggcctc cggcaggggc
    16321 gaccgcgtcg gctggaaccg cctgtccaat gccttccacg tcgaactggc gcgcctggtg
    16381 ggcaacgatg tgctgttcga cattatgaac acgctgtgcg cgcggtcttc cctgattgtc
    16441 gccgtggcgg gcgtgcatcg cgagaaaaaa cacgccatca atacgcatac gcattccgaa
    16501 caccgcgaaa tcctcgacct gctgctggcg ggcaggcgca accgcgtggt caaaatcctg
    16561 cgccgccatt tgggcaactg tatggagcgt ttggaaaaga ctttggaaga ttgaatgccg
    16621 gagcggataa gccgcctgaa ccttcaggcg gttttttaat ggcgaacctg atgccgtctg
    16681 aaatatggat gcgggtatct gcaattttca gacggcaatt tttaagccgc acatatcatg
    16741 cggcaataaa ggagggtagg ggatgagcag cctgatgacg ttgttttcgg tattggtacc
    16801 gatgtttgcc ggatttttta tccgtgttcc caagccttac ctgcccgctt cggacaaggt
    16861 gctgtcggtt ttggtgtatg ccgtgctgct gctgatcggc gtatcgttgt cgcgcgtgga
    16921 ggatttgggt tcgcggttgg gcgatatggc gttgacggtt ctgtggctgt ttgtttgtac
    16981 ggtaggggcg aacctgcttg ccttggcagt gttgggaaag ttgtccccgt ggcggatagg
    17041 gggaaaaggg aagggcgttt cggtcggcgt gtcgggcagt gtgaggcagc tcggatgcgt
    17101 actgatcggt tttgtgtccg gcaaattgat gtgcgatatt tggatgccgt ctgaaaacgc
    17161 gggtatgtac tgcctgatgc tgctggtgtt cctcatcggc gtacagctca aaagtagcgg
    17221 cgtatcgttg cggcaggttt tgcttaaccg gcggggcatc cggctgtcgg tttggtttat
    17281 attgtcatct ctttcaggcg ggctgctgtt tgccgcatcg gcagatggtg tgtcgtggac
    17341 gaaaggtttg gcgatggctt ccggcttcgg ttggtattcc ctctcgggtt tggtaatgac
    17401 cgaggcttac ggggcggtat ggggcagcat catgctgctg aacgatttgg cacgagagct
    17461 gtttgcactg gcatttattc cgctgctgat gaagcgtttt ccggatgcgg cggtgggggt
    17521 cggcggcgcg accagtatgg atttcacatt gcccgtgatt cagggtgcgg gcggtttgga
    17581 agtcgtgccg gtagcggtca gcttcggcgt ggtggtcaat atcgccgccc cgtttctgat
    17641 ggtggtgttt tccacgctgg gctgaacgcg gtaaaatcgg catcccgatg caaggaagca
    17701 gaaaacgatg aaaccgaaaa tccaaaggca tggagagatt ttaagccttg tccgccggca
    17761 tcagtttatg tcggtggacg agcttgccgc cgcattggac gttaccccgc agacgatacg
    17821 ttgcgacatc cgcgagttgg aggagggcgg cagcctgaaa cgccatcacg gcggcgcatc
    17881 ttcgggcgga aacttgccgg agggtctgcc cgccgaccgc caaacccggt gtcaaaacga
    17941 aaaaaacgcc attgcccggc tgattgcgga acacatcccc gacggttcgt cgctgttcgt
    18001 cagtatcggt acgaccatgg aagccgcggc atcagagctg gtgaagcggc gcagcagcct
    18061 gcggattatt accaacaata tccacgtcgc ctccgtcgtt tcggcacgta cggattacac
    18121 ggtcatcatc acatccggcg tcgtccgccc tttggacggc ggtattaccg gcgtggcgac
    18181 cgtcgacttt atcaaccagt tcaaagtcga ttatgccgtg atgagcacgc acggcgtgga
    18241 aagcgacggt tcgcttttgg attacgatta caaggaagtc agcgtcatgc aggcgatgat
    18301 tgccaacgcg cgcgtccgtt ttctcggcgt ggatcacagc aaattccgca gcaacgcgct
    18361 ggtcaggctc ggcggcatta ccggcgtttg acaaagtatt taccgacagg ttgcctgata
    18421 ccgcgatgca gaagatgctg aaagaggcgg gggtggaatg cctgattgcc gatgccgtct
    18481 gaacgctatg tcaaagcgcg caagtcgggt acaataaaca catcatcaaa ccgcttcaga
    18541 cggcatacgg aacctcccca atgccgtctg aagccatctg tttaaagaaa accatgctca
    18601 ataaagacca attcgcggac aaccatttca tccgcaccat catcgaagac gacctcaaaa
    18661 gcggcaaaca cgaagccgtc caaacccgtt ttccgcccga acccaacggc tatttgcata
    18721 tcggacacgc caaatccatc tgcctgaact tcggtttggc gtatatttac gacggtttgt
    18781 gcaacctgcg tttcgacgac accaacccgg aaaaagaaaa cgacgaatac gtcaacgcca
    18841 tcaaagaaga cgtcgagtgg ctcggtttcc attgggcggg cgaaccgcgt ttcgcttccg
    18901 actatttcga ccggctttat gactacgccg tcggtttaat caaagacggc aaagcgtatg
    18961 tcgatgattt gacgcccgaa gaaatgcgag aataccgcgg tacgctgacc gaagcgggta
    19021 aaaacagccc ttaccgcgac cgcagtatcg aagaaaacct cgacctgttc acgcgtatga
    19081 aaaacggcga gttccccgac ggcagcaaaa ccctgcgcct gaaaatcgac atggcggcag
    19141 gcaacatcaa tatgcgcgat cccgtcatct accgcatccg ccgcgcccat caccacaaca
    19201 ccggcgacaa atggtgcatc tacccgatgt acgattacac gcattgcatt tccgatgcca
    19261 tcgaaggcat cacgcattcc ttgtgcacgc tcgaatttga agcgcaccgt ccgctttacg
    19321 actgggtgtt ggacaacatc cccgcgccgc acgccacccg tccgcgccaa tacgagtttt
    19381 cccgtttgga gcttttgtac accattacct ccaaacggaa attgaatcag ttggttgtgg
    19441 aaaaacacgt ttccggctgg gatgatccgc gtatgccgac catttccggt atgcgccgcc
    19501 gcggctacac gcccgaaggg gtgcgcctgt ttgccaaacg cgccggtatt tccaaatctg
    19561 aaaacatcgt cgacatgagc gtgttggagg gtgcgattcg cgaagagctg gaaaactccg
    19621 ccccgcgcct gatggcggtt ttgaacccgc tcaaagtgac cctgaccaac tttcaagccg
    19681 gcaaaaccca aagccgccgt gccgcgttcc atccgaacca cgaagaaatg ggcgatcgcg
    19741 aagtacctgt ttcacaaacc atctacatcg aagccgacga ctttgccgaa aatccgccca
    19801 aaggcttcaa gcgtctgatt cccggcggcg aagtacgctt gcgccacggc tatgtcatca
    19861 agtgcggtga agtcgtcaaa gacgaagcag gcaatgtggt tgaactcaaa tgcagcatcg
    19921 accacgacac cttgggcaaa aatccagaag gccgcaaagt taaaggcgtg attcactggg
    19981 tttccgccga acacgccgcc gaaatcaaag tccgtctgta cgaccgcctc tttaccgtcg
    20041 agcgtcccgg tgccgtgcgc ggcgaagacg gcgaatacct gccgtttacc gatttcctca
    20101 atccggaatc cgttaaggaa atcactgctt acgccgaacc tgccgcgaaa gatttgccgg
    20161 cggaaagccg ttggcagttc gagcgcatcg gctattttgt gaccgaccgc caagaccacg
    20221 gcaaagacac gccggtgttt aaccgcacgg tgacgttgaa agattcttgg cagcctaagt
    20281 aaaccccatc cttgccgtct gaatattgtt cgggcggcat ttctccttta cccgcgaaat
    20341 gcggcacatt cggcacaccg gaaaggaaat atgatgaaag tcctctttat cgccgacccg
    20401 atggcaagtt tcaaaaccta caaagacacc acctacgcga tgatgcggga aatggcaaaa
    20461 cgcggctggc ggctgtttca taccttgagc ggggaattgt ctgtaaacgg cggtttggta
    20521 acggcacagg catcggcatt tgaattttcg ggtgcaaaaa acgatgatga ccatgaatgg
    20581 tttaaagcgg cggacaaagt tcagacggca ttaaaagcat ttgatgccgt gattatgcgt
    20641 accgatccgc cgttcgatat gcaatacctt tactccaccc aattactgac gctggcggaa
    20701 cagcagggcg cgaaagtgtt caacagcgga cgggcgatgc gcgactttaa cgaaaaactg
    20761 gcgattttga atttcagccg ctttaccgcg cccacgctgg taacgacccg ttccgccgat
    20821 gtccgcgcat ttttgaaaga acacggcgac atcatcgtca aaccgctcga cggcatgggc
    20881 ggcatgggca tcttccgcct gaccgaaaaa gaccccaaca tcggcagcat cctcgaaacc
    20941 ctgatgcggt ttgattcccg caccattatg gcgcaacgct acattcccga aatcgtacac
    21001 ggtgacaaac gcatcttgat tatcggcggc gaagtcgtcc cctatgcttt ggcgcgtatc
    21061 ccgcaaaacg gcgaaacacg cggcaatctg gcggcaggcg ggcgcggtgt ggcgcaggaa
    21121 ttggacggac gcgaccggga aattgcagag actctggctc ccgagcttaa acggagcggc
    21181 atcctgctgg ccggtttgga cgttatcggc agcaacctga ccgaagtcaa cgtaaccagc
    21241 ccgaccggat tccaagaaat tatgaaacaa aaaagtttcg acgtggcggc aatgtttgcc
    21301 gatgccgttg ccgcgtggtc ggtacgttaa accgatgccg tctgaaaggc ttttgcttcg
    21361 taaccgcttg gtttgttcgg gcaggcaggg ttttccctca gccggcaggg atgcgcttaa
    21421 tgccgtacgg acacccctcc gccccgtttt cagacggcat atattgagga cattttgaaa
    21481 ggataccgat ggaaccttcc tcctacgcgg cagaaaaaaa aggcaaaagc ggcatcaggc
    21541 gcgtcatcaa cgcattcggc tattcgatag acggcatcgc cgccgcctac cgttacgaag
    21601 cggcattccg tcaggttttg tggctgaacg cgctgctggt gtgcgcggca tttttttggg
    21661 tttccgaaac cgccgtccgc ctgccgttga ttatcgcgtc ttttgtgtcg gtcattgtcg
    21721 aactgttcaa caccgccgtc gaagccgccg tcgatcatac ttcgaccgaa aaacacgagc
    21781 tggccaaacg cgccaaagat gcaggttctg ccgcacaact ggttgccatg ctgatgttgg
    21841 cggcggtttg gctgtccgcc ctgttcgggt aaaacgcttg cagcaggatt tgtaatcctt
    21901 taggattagt atttattatt cacttaatct acatcaaatt tccgagcagt atttgtatgt
    21961 aagattaagc acattccccg tctgatatta aaggagcagg aagatgaaaa aattattggc
    22021 agccgtgatg atggcaggtt tggcaggcgc ggtttccgcc gccggagtcc atgtcgagga
    22081 cggctgggcg cgcaccactg tcgaaggtat gaaaatgggc ggcgcgttca tgaaaatcca
    22141 caacgacgaa gccaaacaag actttttgct cggcggaagc agccccgttg ccgaccgcgt
    22201 cgaagtgcat acccacatca acgacaacgg cgtgatgcgt atgcgcgaag tcaaaggcgg
    22261 cgtgcctttg gaggcgaaat ccgttaccga actcaaaccc ggcagctatc acgtgatgtt
    22321 tatgggtttg aaaaaacaac tgaaagaggg cgacaagatt cccgttaccc tgaaatttaa
    22381 aaacgccaaa gcgcaaaccg tccaactgga agtcaaaacc gcgccgatgc cggcaatgaa
    22441 ccacggtcat caccacggcg aagcgcatca gcactaatct gctgaaaata tttgaaatgc
    22501 cgtctgaaaa agcccgggct ttcagacggc atttttatgc ccgcctttaa aatgtgttaa
    22561 aatccgcctt taaaaaccgc cgtttccaag ccatcctgcg tatgaatacg acatcaaaca
    22621 cttccaatat catcgtcggt ctttccggcg gtgtcgattc ttccgtaacc gccgccctgc
    22681 tcaagcagca gggttatcaa gtgcgcggtg tgttcatgca gaactgggaa aacgacgaca
    22741 acgacgaata ttgcagcatc aaacaggatt cgttcgatgc catcgccgtt gccgatattg
    22801 tcggcatcga catcgacatc gttaatttcg ccgcgcaata taaagacaaa gtttttgctt
    22861 attttcttca ggaatacagt gcggggcgca cgccgaatcc ggatgtgttg tgcaatgccg
    22921 aaatcaaatt caaatgcttt ttggactacg ccgtagggca gggcgcggat accattgcca
    22981 ccggacacta tgcgcgcaaa gaagtccgca acggcgtgca ttacctgctc aaaggtttgg
    23041 atcgaaacaa agaccaaagc tattttctct accgcctcaa gcctttccaa ctcgaacgcg
    23101 cgatttttcc gttgggcggt ttggaaaaac ccgaagtgcg ccgccttgcc gccgaattta
    23161 atttgccgac tgccgctaaa aaagacagta ccggcatctg tttcatcggc gagcgtccgt
    23221 tccgcgagtt tctgcagaaa tacttgccga ccgacaacgg caaaatggtg acgcccgaag
    23281 ggaaaaccat cggcgaacac gtcgggctga tgttttacac attgggtcag cgcaaaggat
    23341 tgggcatcgg cggcgcgggc gaaccgtggt ttgttgcggc taaagatttg acgaaaaacg
    23401 aactcatcgt cgtacaagga cacgaccatc cgctgctcta tacccgcagc cttgtgatga
    23461 acgatttgag tttcacgctg cccgaacgtc cgaaggcagg acgctatacc tgcaaaacgc
    23521 gttaccgtat ggcggacgcg ccttgcgaat tgtgctattt ggatgatgaa accgccgagc
    23581 tggtgtttga cgaaccgcaa tgggcggtta cgccgggtca gtccgccgtg ctgtacgacg
    23641 tcgacatctg tttgggcggc ggcatcatcc aaacgaccga caaacccgtc atcatcacgc
    23701 gataaaggta atgccgtctg aaacggtttt cagacggcat tgttccgctc aattccactt
    23761 taaagaccga tacctatgga aaaaatctgg ttagaaagct acgagaaggg cgtcagtgcc
    23821 gaaatcgaca tcacgcaata caattccgtc agcgacgtat tccgccaaag cgtggaaaaa
    23881 tttgcccgtc tgcccgcttt tcaaaatatg ggcaaaacgc tcacttatgc cgaaaccggc
    23941 aaactggcga ccgatttcgc ctcttatctg caaaacgtcc tcaagctgcc gcgcggcgaa
    24001 cgtgttgcca ttatgatgcc gaacgtattg caatatccga ttgccctttt cggtattttg
    24061 caggcaggtt tggtggcggt gaacaccaat ccgctctata cgccgcgcga gttggagcat
    24121 cagctgaaag acagcggtgc gaccgccatc atcgttttgg aaaatttcgc caacacgctg
    24181 gagctggtgc tgccgcgcac gcagatcaaa cacgtcatcg tcgcctccgt cggcgaaatg
    24241 ttcgggctgc ttaaaggttc gctgatcaat ttcatcatcc gaaaaatcaa gaaaatggtt
    24301 cccgaatacc gtattcggga aaccgtttcc tttcagacgg cattgaaaga gggggcgaag
    24361 cacgttttcc aacctgtcgc attaaaccgc gaagataccg cattgttgca atacacgggc
    24421 ggcacgacag gcgttgccag aggcgcggtg ctgagccacg gcaacatctg cgccaatatg
    24481 cttcaggcaa aagaatggat taaaaaccaa ttgcgcgagg gaaaagaaac cgttatcgcc
    24541 gccctgccgc tgtaccacat cttcgccctg acagtgaatc tgatgatttt tgccaatgcc
    24601 ggctcgaaaa ttgtcctgat tgccaacccg cgcgatatga aaggctttat cggcgaactg
    24661 aaaaagcagc gggttaacgt atttatcggc gtgaacacgc tgtttaacgc gatggtcaac
    24721 cggcccgatt tcgccgaagt cgatttttca ggattgcggc tgactttggg cggcggtatg
    24781 gcgacccaaa aagccgttgc cgaaaaatgg aaaaaaatca ccggcacgcc catcgtcgaa
    24841 gcctacggtt tgaccgaagc cagccccggc gtgtgctgca accccttaaa catcgaatca
    24901 tacagcggca gcatcggttt gcccgtcccg tccaccgaag tcgaactgcg cgacgcaaac
    24961 ggcaaagaag tccccgttgg gcagccgggc gaattgtggg taaaaggccc gcaagtgatg
    25021 caaggctact ggaaccgccc cgaagaaacc gccaaagcca tagacgcgtg cggctttttg
    25081 gaaaccggcg atattgccgt gatggacgaa aaaggccgtc tgaagctggt cgatcgcaaa
    25141 aaagacctcg tcgtcgtttc cggattcaat gtttatccga acgaaatcga ggaattcatc
    25201 gcgcaccacg aaaaagttat ggaagttgcg tgtatcggcg tacccgacga aaaaaccggc
    25261 gaggcactca aagtgttcgt cgtcaaaaaa gacccgtctt tgaccaaaga agaactcacc
    25321 gctttctgcc gtaccggtct gaccgcatac aaagtgccga aagacatcga attccgcgac
    25381 gagttgccca agtccaatgt cggcaaaatc ctgcgccgcg agttgcgcca aagtgccggg
    25441 aaataaagaa aagataccgt ctgaaaacag ccgtccaccg ttcagacggc atccgtccgt
    25501 ttgccagaac cgcgcgcttc acgttaaaat cacgcattcc aacatgggta ttccatcatg
    25561 accaaattca ttttcgtaac cggcggcgtt gtctcctcac tgggtaaagg tatcgccgcc
    25621 gcttctattg ccgccatcct cgaatcgcgc ggcttgaacg ttaccatgct caagcttgat
    25681 ccttatatca acgtcgatcc cggcacgatg agcccgttcc aacacggcga agtgttcgta
    25741 accgacgacg gcgcggaaac cgacctcgac ttgggacact acgaacgttt catcgattcc
    25801 acgatgaccc gccgcaacag cttcagcacg ggtcaggtgt acgaaaacgt tatcgccaaa
    25861 gaacgccgcg gcgactatct cggcggtacg gttcaagtca tcccgcacat taccgacgaa
    25921 atcaaacgac gcatccacga aggcgcggcg ggttacgatg tggcgattgt cgaaatcggc
    25981 ggtacggtcg gcgacatcga atcgctgccg tttttggaag ccatccgcca gatgcgaagc
    26041 cagttgggac gcaacaacac cctgttcgcc cacttgagct acgttcccta catcgccgcc
    26101 gcaggcgaaa tcaaaaccaa gccgacccag cacaccgtga aagaaatgtt gagcatcggc
    26161 ttgcaacccg acatcctgat ttgccgtatg gacaggaaaa tgccggcaga cgaacgccgc
    26221 aaaatcgcct tgttctgcaa cgtggaagag cgcgcgattg tcggcagcta cgatgtggac
    26281 agcatctacg aatgccccga aatgctgcac gaccaaggca tcgacaacat cattaccgag
    26341 cagttgcagc ttaacgtgca gcaggcggat ttgaccgcgt ggaaaaaaat cgtccacgcc
    26401 gtcaaaaacc cgaaacacac cgtcaaaatc gcgatggtcg gcaaatacgt tgatttgacc
    26461 gaatcctaca aatcattgat tgaagccttg aaacacgcgg gcatccatac cgaaaccgat
    26521 gtgcagatta ccttcgttga cagcgaaagc atcgagaaaa acaagggcga cgtttccgta
    26581 ctcaaagata tggatgccat cctcgttccc ggcggcttcg gttcgcgcgg cgtggaaggc
    26641 aaaatcgccg ccgtgcgcta cgcccgtgaa aacaacgtgc catacttggg catctgcctc
    26701 ggtatgcaga ttgcgctgat tgaatacgcc cgcgacgtgg caggtttgaa aggtgcgaat
    26761 tccactgagt ttgacttgaa atgcgctgcc cccgtcgtcg ccctgattga cgaatggcaa
    26821 accgccgacg gcagcgtcga aacccgtgac gaatccgccg atttgggcgg cacgatgcgt
    26881 ttgggcgcgc aagaagtcga attgaaagca ggcagcctcg ccgtcaaaat ctacggcagc
    26941 ggacacattc gcgaacgcca ccgccaccgc tacgaagtca acaacaacta cgtttccgcg
    27001 ctggaacagg caggtttggt catcggcggc gtatccgccg gacgcgaacg cttggtcgaa
    27061 accatcgaac tgccgaacca tccttggttc ttcgcctgcc agttccatcc cgagttcacg
    27121 tccaacccgc gcaaagggca tcctttgttc accgcgtttg tcaaagccgc gttgaacaat
    27181 aaaaaagcct gataaagcgt tacttgatga tcaaaatgcc gtctgaaagc ctgacaaaga
    27241 ctttcagacg gcattttcgc aaatcgggga tcataaaagc catcaattta
//
LOCUS       DAXGCP010000017        27172 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.017, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000017 DAXGCP010000000
VERSION     DAXGCP010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27172
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.017"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..299
                     /locus_tag="ACFJCW_000645"
     CDS             <1..299
                     /locus_tag="ACFJCW_000645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC4150859.1"
                     /translation="YVPDDWNKEKFIAGVEALKAQRPSFKTYVLIKTGRKLSRATGTM
                     LSEDDRKLGEKYPNDLFLTLYQVVGNKDKGWQGKDFWLPNIKLPHNGLVYQSAK"
     gene            complement(362..1426)
                     /gene="hemE"
                     /locus_tag="ACFJCW_000646"
     CDS             complement(362..1426)
                     /gene="hemE"
                     /locus_tag="ACFJCW_000646"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HFC4150860.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTGLATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFAHA
                     LQHESDIAKLHVPDMEKLQYVFDAVTSIRKALDGRVPLIGFSGSPFTLACYMVEGGGS
                     KEFRTIKTMMYSRPDLLYKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDAAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAQIGADALGLDWTCNIGE
                     ARRRVGNQVALQGNFDPSALFGTPESIRTEVARILTGYGHGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            complement(1501..2718)
                     /locus_tag="ACFJCW_000647"
     CDS             complement(1501..2718)
                     /locus_tag="ACFJCW_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HFC4150861.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVLNIPENMRRSGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLGNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQMADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGEREQQKAIDFADSWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSIPARLVLAKVFDETAQSQKAEAQRNLVLA
                     SVAGENRPSAETR"
     gene            complement(2715..4049)
                     /locus_tag="ACFJCW_000648"
     CDS             complement(2715..4049)
                     /locus_tag="ACFJCW_000648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HFC4150862.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAACALVLAALGLGASGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQSAIQSELDRLDSGVKANGEQILMTQKAYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFDQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLETAVSGLPLILDGVLKPGVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNGEVYQGDLNNAEAAVRQYFDAKS
                     PATQSWLKELAELKTLDVRMTADDGLKTSLNAVRAYRDGTRMTAAENQEAEQAASEPA
                     NENTASEPAAASDVKAIEAPSLPSERKPEQPAKKQPAPEKAGRSPSAKGERA"
     gene            complement(4061..4825)
                     /locus_tag="ACFJCW_000649"
     CDS             complement(4061..4825)
                     /locus_tag="ACFJCW_000649"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HFC4150863.1"
                     /translation="METAKPVMLIVRPSGRAKDDVEVCRRAGWQAEVLSPIEIETDEA
                     SLKRLPEMYARADAVFWVSPAAVETAVPYLNLSDGIKAHIAVGQGSRRALARYAGAGV
                     FAPEDGNDSEAVLRLPVWNSLPEGARVLSVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVQSLFAQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSYSSISVSDGMVFPGTSNQ"
     gene            complement(4843..5265)
                     /locus_tag="ACFJCW_000650"
     CDS             complement(4843..5265)
                     /locus_tag="ACFJCW_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HFC4150864.1"
                     /translation="MKKMFLSAALLLSAAAQTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLLGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERRGKEVARVGCTPKTAQANFNDDDFSR"
     gene            complement(5547..6515)
                     /locus_tag="ACFJCW_000651"
     CDS             complement(5547..6515)
                     /locus_tag="ACFJCW_000651"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC4150865.1"
                     /translation="MVELQEIFDVSYGSKLDLNKMSSFNPTINFVGRSGKNNGVTASV
                     DLLKNTKPYPAGLLTVALGGSVLSTFLQNKPFYTAQNVAVLNPKTEMTEQQKLFYCAA
                     IFANAYRFSACGREANRTLRQLFVPSLDEIPSWVESVNLNPSAGVTEPKLKEPLDLPV
                     VRQSKRLDEIFTIQNGIAATKLKEFEQRQKDTVVYIRPASTQARTLRSYIARDSVDEK
                     HIFPCHTLFTSTNGEGSHTYSYVSTCEFVANSDVAVLTPIQSDMPIEVKLYYAKCITA
                     NRYLFSYGRKPKGEKLKSIMLPYFDQQEDFDYICRFIHTLLFSNNL"
     gene            complement(6515..7339)
                     /locus_tag="ACFJCW_000652"
     CDS             complement(6515..7339)
                     /locus_tag="ACFJCW_000652"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HFC4150866.1"
                     /translation="MFALAASNMILRGDGKANLHQSSCFMTDFQDLIKNPKPETGLKR
                     PNVGFLNPPYAQSKSDAELHELYFVKEMLDMLAEGGTGIAIIPVSCVIAPSKAKSEIV
                     KYHRLKAVMSMPSELFYPVGTVTCIVVFEAHKPHFQTVVIDPDTQEEISTKKACRKTW
                     FGYWRDDGFEKTKHLGRIDLYDRWQGIKARWLEHYLNNEVHTGESVTAFVTDNDEWVA
                     EAYLETDYSKITRADFEQVVREFALFQLLGAEVGPTENLDNESYEDDDNNDFGDDE"
     gene            complement(7369..8010)
                     /locus_tag="ACFJCW_000653"
                     /pseudo
     CDS             complement(7369..8010)
                     /locus_tag="ACFJCW_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711434.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(8179..8499)
                     /locus_tag="ACFJCW_000654"
     CDS             complement(8179..8499)
                     /locus_tag="ACFJCW_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HFC4150867.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDAEGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLGKEAAEQGLIWFAEHVADARAHPGKHPNIDFLENVVQSGETLLLKP
                     LAAQ"
     gene            complement(8522..9148)
                     /gene="upp"
                     /locus_tag="ACFJCW_000655"
     CDS             complement(8522..9148)
                     /gene="upp"
                     /locus_tag="ACFJCW_000655"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HFC4150868.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLTTELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPISYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKEKGCRNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSRLNENGYIIPGLGDAGDKIFGTR"
     gene            complement(9254..9565)
                     /gene="grxD"
                     /locus_tag="ACFJCW_000656"
     CDS             complement(9254..9565)
                     /gene="grxD"
                     /locus_tag="ACFJCW_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HFC4150869.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVAVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILMEMYEAGELQELLK
                     A"
     gene            complement(9666..9881)
                     /locus_tag="ACFJCW_000657"
     CDS             complement(9666..9881)
                     /locus_tag="ACFJCW_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HFC4150870.1"
                     /translation="MKAIHPYACPRCCRLPANTFRTGMANSASKFCIAKGGRREVKKD
                     ESGGGYALCHLPDSRIVEEWEYCRSQH"
     gene            complement(9907..10686)
                     /locus_tag="ACFJCW_000658"
     CDS             complement(9907..10686)
                     /locus_tag="ACFJCW_000658"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HFC4150871.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFAVAEAHEHIYCTIGVHPDSKEAEEFSIAEMVEAAAHPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLAILKECKTNSGVIHCFSEDVGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRVV"
     gene            complement(10691..11041)
                     /locus_tag="ACFJCW_000659"
     CDS             complement(10691..11041)
                     /locus_tag="ACFJCW_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HFC4150872.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTDDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPASTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGSTISGSRPTFTM"
     gene            complement(11045..12022)
                     /locus_tag="ACFJCW_000660"
     CDS             complement(11045..12022)
                     /locus_tag="ACFJCW_000660"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HFC4150873.1"
                     /translation="MIYPWHQEQWRQIAEHWTSRPNAWLFVGKKGTGKTAFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGRGSHPDFYEITPLADEPENGRKLLRIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKKVLPAPSHGEALAYLRDRGVAEPEERLAFHSGAPLFQEEGELRELRAKLLEI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TASGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENR"
     gene            complement(12056..13186)
                     /locus_tag="ACFJCW_000661"
     CDS             complement(12056..13186)
                     /locus_tag="ACFJCW_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC4150874.1"
                     /translation="MFTDENMTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPALKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGEISLQDALKNADSAHDLRLAVQLRSRRAQSSDPDLELL"
     gene            13354..14055
                     /locus_tag="ACFJCW_000662"
     CDS             13354..14055
                     /locus_tag="ACFJCW_000662"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HFC4150875.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGRFSAYEGELAGK
                     RIVLALSGIGKVNAAVATAWLIRQFAPDCVINTGSAGGLGKGLKVGDVVIGTETEHHD
                     VDVTAFGYARGQVPQLPARFASDGILIETAKRAARTFEGAEVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPEVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFEEFLKTA
                     AASSAKMVAEIVKSL"
     gene            14197..15990
                     /gene="lepA"
                     /locus_tag="ACFJCW_000663"
     CDS             14197..15990
                     /gene="lepA"
                     /locus_tag="ACFJCW_000663"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HFC4150876.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHKG
                     RELASKMRELIPRQMFDIAVQAAIGSRIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            16136..17155
                     /gene="lepB"
                     /locus_tag="ACFJCW_000664"
     CDS             16136..17155
                     /gene="lepB"
                     /locus_tag="ACFJCW_000664"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HFC4150877.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNVFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDIVEYRDKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFRSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIDQSGLNHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(17260..17367)
                     /locus_tag="ACFJCW_000665"
                     /pseudo
     CDS             complement(17260..17367)
                     /locus_tag="ACFJCW_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(17591..17740)
                     /locus_tag="ACFJCW_000666"
     CDS             complement(17591..17740)
                     /locus_tag="ACFJCW_000666"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150878.1"
                     /translation="MDWQAVKTGKTKHADNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(17786..18693)
                     /locus_tag="ACFJCW_000667"
                     /pseudo
     CDS             complement(17786..18693)
                     /locus_tag="ACFJCW_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
     gene            complement(19002..19934)
                     /gene="cysK"
                     /locus_tag="ACFJCW_000668"
     CDS             complement(19002..19934)
                     /gene="cysK"
                     /locus_tag="ACFJCW_000668"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HFC4150879.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTKGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEAAEKAGKINKNTVIVEATSGNTGIGLAMVCAARGYKLAITMPESMSKER
                     KMLLRTFGAELILTPAAEGMAGAIAKAQSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWNDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTEIYDSITKVPNEAAFETARAMAEKEGILAGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            complement(20130..20735)
                     /locus_tag="ACFJCW_000669"
     CDS             complement(20130..20735)
                     /locus_tag="ACFJCW_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150880.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIALWLGISVL
                     GVKLMPGMWGMTRAAPLFIPHFYLTLGSIFFFIGYWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGVLAAMLMQVAVTAMLLAEIGR"
     gene            complement(20732..21583)
                     /gene="dapF"
                     /locus_tag="ACFJCW_000670"
     CDS             complement(20732..21583)
                     /gene="dapF"
                     /locus_tag="ACFJCW_000670"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HFC4150881.1"
                     /translation="MKTLKFTKMHGLGNDFMVIDAVSQDFTPEDVPIAAWADRFRGVG
                     FDQLLVVGCSETEGVDFRYRIFNADGSEVGQCGNGARCFARFVADKGLTDKKEICVET
                     AKGIIFPKLSDNGMVTVNMGKPKFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSRIEPHRQFPERVNVGFMQVVGRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVVLPGGTLYIEWACGGDVMMTGPAETVF
                     EGELAYS"
     gene            21720..22034
                     /locus_tag="ACFJCW_000671"
     CDS             21720..22034
                     /locus_tag="ACFJCW_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150882.1"
                     /translation="MSRLFLLLFPWATLAACTRNIPASPAVSNCAHLHNRTVLYFDAH
                     GKPADSTAKGGFYRTVEIHDTNRILIQDFNSTGNALVKPYWSDCRKLSVFPDKHLTMS
                     HP"
     gene            22031..22699
                     /locus_tag="ACFJCW_000672"
     CDS             22031..22699
                     /locus_tag="ACFJCW_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC4150883.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRISSYTAIGLMLGLIGQLGISLDQTRVLQNILYTASNLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSATTGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(22772..24895)
                     /gene="pnp"
                     /locus_tag="ACFJCW_000673"
     CDS             complement(22772..24895)
                     /gene="pnp"
                     /locus_tag="ACFJCW_000673"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HFC4150884.1"
                     /translation="MMFNKYVKTFQYGNQTVTLETGEIARQAAAAVKVSMGDTVVFVA
                     VTTNKEVKEGQDFFPLAVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRP
                     LFPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYING
                     VYVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAIN
                     AINEFADEVNPEVWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWN
                     AVKEALITEETDTLAANEIKGIFKRLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTG
                     VLPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEV
                     GRMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCL
                     SLLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQ
                     MDIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKISQDKI
                     RDVIGKGGETIRSITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEEITAEVEVGK
                     VYEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEV
                     DDRGRVRLSIKALLDAPVREENAAE"
     gene            complement(25129..25992)
                     /locus_tag="ACFJCW_000674"
     CDS             complement(25129..25992)
                     /locus_tag="ACFJCW_000674"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HFC4150885.1"
                     /translation="MSEIGLVKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDAPI
                     PGKGEILTQISNFWFKKLAHIMPNHFTGDTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIRLPEGMREAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECGRIIGKELAEEVRDKAVRLYTEAAEYAKSRGIIICDTKFEFGLDEKGTLTLMDE
                     VLTPDSSRFWPADQYEVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIRKTVEK
                     YQEALTLLTQD"
     gene            26185..27048
                     /gene="rfbD"
                     /locus_tag="ACFJCW_000675"
     CDS             26185..27048
                     /gene="rfbD"
                     /locus_tag="ACFJCW_000675"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HFC4150886.1"
                     /translation="MRILLTGSKSQLAHCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGDAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     VFDGKGKIPHQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLSAAIIRLLQQSNPVRGIYHYAGGKSVSWYE
                     FARHIFQTALQQDASFPVPELKAVSDEGSAAAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
BASE COUNT         6514 a         7295 c         6613 g         6750 t
ORIGIN      
        1 gttatgttcc agatgactgg aataaggaaa aatttattgc tggtgtagaa gcattaaaag
       61 cacaacgtcc aagttttaaa acctatgttt tgatcaaaac cggacgtaaa ctttctcgag
      121 caaccggcac aatgctttcg gaagacgacc gtaaattagg agaaaaatat cccaatgatt
      181 tattccttac gctttatcaa gtagtaggaa ataaagacaa aggttggcag ggaaaagatt
      241 tttggttacc caatatcaag ctaccacaca atggcttggt gtaccaaagt gcaaaatgaa
      301 gcatatgccg tctgaaaact tccgattctt cagacggcat atcgggcggt ttcctgccgg
      361 cttacccgcc gtgatactgc cgcgacagct cgtgtacggt gtcgactaag attttggcgt
      421 gttcggggtc ggcgtgttgg ttgatgccgt gtccgaggtt gaagacatgg ccgctgccgt
      481 gtccgtagcc ggtcaggata cgtgcgacct cggtgcggat ggattcgggc gtaccgaaga
      541 gggcggacgg gtcgaagttg ccttgcaggg cgacttggtt gccgacgcgg cggcgtgctt
      601 cgccgatgtt gcacgtccag tccaagccca atgcgtctgc gccgatttgg gccatgcttt
      661 ccagccacag cccgccgcct ttggcaaaca cgataacagg cacgcggcga ccttcgcttt
      721 cacgtttgag tccggcaacg atttggcgga tgtatttgag gctgaactct ttaaacgccg
      781 cgtcgctcaa cacgccgccc caagtgtcga aaatctgcac cgcctgcgcg cccgcgtcga
      841 tttgggcgtt gaggtaggcg gtaacggctt gggcgttggt atcgaggatt ttgtacagca
      901 aatcggggcg cgagtacatc atggttttga tggtgcggaa ttctttgctg ccgccgcctt
      961 cgaccatata acaggcgagc gtgaacgggc tgccggagaa gccgataagc ggtacgcggc
     1021 cgtccaatgc tttacggatg gaagttaccg cgtcgaaaac gtattgcagt ttttccatgt
     1081 cgggaacgtg cagcttggcg atgtcggatt cgtgttgcaa ggcgtgtgcg aatttcgggc
     1141 cttcgccttc ggcaaaatac agccccaagc ccattgcatc gggaacggtc aagatgtcgg
     1201 aaaacaaaat cgccgcgtcc aaatcgaagc gttccaaagg ctggatggtg acttcggtcg
     1261 ccaatccggt gtttttgcac aaatcgagga agctgcccgc tttcgcgcgt gtggctttgt
     1321 attcgggcag ataacgcccc gcctggcgca tcatccaaat cggtgtgtat tcgacgggct
     1381 gtttgagcag ggcgcggagg aaggtatcgt tttttaaaag agtcatacgg gttttctgtc
     1441 agtctgtttg tcaagtgaaa tggttttcag acggcatttc aacgatgccg tctgaaggtt
     1501 tcaacgggtt tcggcggaag ggcggttttc cccggcaacg cttgccaaaa ccaagttgcg
     1561 ctgtgcttcg gctttttgcg actgtgcggt ttcgtcaaaa acctttgcca acaccaaacg
     1621 cgccggaata ctcggcttca gtgcaatact cgcttcaagg tagccttttg ccttacccca
     1681 aagtttgcgg ccgtaggcga gccggccgag atacatcagc agaagcgcgt tatcgggctg
     1741 ttctttcagc caagaatcgg caaaatcgat ggctttctgc tgttcgcgct cgcccaaaaa
     1801 gcgcacgctt tcgacaaagg cttccaaaag ctcggggcgg cggttgtgcg gataatgctg
     1861 tttgacccat ttgaccgcat cggcatacag tcccaaacgt tcgtactttt ccgcaaccga
     1921 tacgctcaat tccccgtttt tgaggctgtc gggaatccgc ttcaggcagg ttttcaaagc
     1981 ggcggcatcg gcagcatccg ccatctggcg gcggtatgcc caattttgat accgttccat
     2041 ttccgatttg cccaacgcgc ccgccttgga aagtttttcg gtttttgcca gaacctgcaa
     2101 cgcatcgccc cgatcgaagg cgtaacgaag ttgcagacgc acgaggcgcg taaggttggc
     2161 attcatcttc gccgccgcat gaagattggc ttccgccgct tcgtaatcgc gccggttcag
     2221 tgccgattcc gccagcagca ggtagcggga aagctgctgt ttttccggca gtttggcgat
     2281 ttccgcaaga taacggtcgc gcagctcgat gttttccatc tgtcctgccg cgtgcgcgcc
     2341 cagcatcaat gccaaagtcc ggttgtctcc ggcctctttg ttgcccaaca ctcgagaggc
     2401 ttcgagttcc gccttttcaa aacgcccttc gaaatacgcc aaacctgcct tattcaaggc
     2461 aagcgcggcc ttgcggcctt tacgcgcaga accggaacgc cgcatatttt cggggatatt
     2521 gagtacgccg atgatgaatt taaacaggaa ataccacacc acgacggcaa tcagcgaacc
     2581 taacacaaag gcgtgcaggt tgattctgag catggtctgt ccgagtacga tatacacgtc
     2641 gccggtgtaa atgcccgaag ccagcgccag tccgacggcg gcggcaaaca ggacgacaat
     2701 ccagactacc gttttcatgc gcgttctcct ttagcggacg gcgaacgccc tgccttttcc
     2761 ggtgcgggct gtttttttgc aggctgttcc ggtttgcgtt ccgaaggcag ggacggtgct
     2821 tctatggcct tcacatccga tgcggcagcc ggttcggaag ctgtgttttc gtttgccggt
     2881 tcggaagccg cctgttccgc ttcttgattt tccgccgccg tcatgcgcgt accgtcgcga
     2941 taggcgcgga cggcatttaa actggtcttc aagccgtcat ccgccgtcat gcgtacatcc
     3001 agtgttttca attccgccag ttctttcagc cacgactgcg tggcgggcga cttggcatcg
     3061 aaatactgtc tgacggcggc ttcggcattg ttcaaatcgc cctgatagac ttcgccgttg
     3121 cgctgcatca atgcggtgcg cgcatccaac aggcgcagac gcaggttttc acgcacaaaa
     3181 tatgcctgtt cgggagaaat cagcatggca tcgttgtttt ccaaacggcg gatttcgacc
     3241 agccccttca atgtgccgag ggatttttcc catacgttct gccaccatga agcggaaacg
     3301 gcttcgttgc gggcctgtac gcccggtttc aatacgccgt ccaaaatcag cggcagtccg
     3361 gatacggcgg tttccaaccg gtcgaggcgc aatgccgtgc cggaaatatc gacataggga
     3421 cggtttttca gttccgccaa atcgctgctg accgcctgtt tgatcggcag aagctctgcc
     3481 tgatcgaaac gggacaggcg gctgtcgata tgctccaaca cgccgactgc cgtttggata
     3541 ttgccggtca acaccagctg ttgcgccgcc agattgagta tggtctcggt ttcgtccacc
     3601 agccaatcgg cacgcccttt ggtcagctcg cgataggctt tttgcgtcat caggatttgt
     3661 tcgccgttgg ctttgacacc gctgtccaaa cggtcgagtt cggactgtat ggcactttgg
     3721 cggttgaggt tgtctttgag cagggcggcg ttttccgact cgcccaaggc ggctttgtcg
     3781 attttctggt tgaatgccag ctcttggttt ttcaagacat tctgtccttg gacaaacaaa
     3841 aaaccacttg cacccaaacc caatgccgcc aataccaagg cgcaggccgc caaagcgttg
     3901 ctgccggact gtttgacgat aaaaggagcg gcgggaatgt gtacttctgt ttcgttttct
     3961 ttgcgtgggg aagaggtttc agacggcatt tcttttgatg cctgtatctc gcgtacgggt
     4021 tcggatgatt tgttttcagg ttcgcccacc gttttgctcc ttattggttt gaggttccgg
     4081 gaaagaccat gccgtctgaa acggaaatgg aagaatagga aagcgcggct tccagcgtag
     4141 ggacggtttc gaccgaacac acgccttcgc gcttcaatgc ctccgcaatg cgcggatgat
     4201 gggtaaagta tagcaaggat ttgaagaatc gggaaaattg cggcggaagc tgtgcaaaca
     4261 gcgactgcac aagttctgtg gacgtaatat aggcggcggc aatattttcg gtttggaaat
     4321 tttgaaagtt caaaggttta tgccgtctga aatagacttc tgccacctcc gtccgaaaac
     4381 ctttctcctg caaggcattc atcagaaaat cccgcccgcc gtgtccgcgc acagacaata
     4441 cgcgcgcacc ttcgggcaga ctgttccaaa ccggcaggcg caaaaccgcc tcgctgtcgt
     4501 tgccgtcttc aggtgcaaac acgcccgcgc ccgcataacg cgccaaggca cggcggctgc
     4561 cttgccctac ggcaatgtgc gcctttatgc cgtctgaaag gttaaggtac gggacggcgg
     4621 tttcaacggc ggccggactg acccaaaaca cggcatccgc acgggcatac atttccggca
     4681 gccgtttcag gcttgcttcg tcggtttcga tttcaatcgg actcaacact tccgcctgcc
     4741 atccggcacg acggcagact tccacatcgt ccttcgccct gcccgacggg cggacaatca
     4801 gcatgacggg cttcgctgtt tccatcgcct tatccgcccc gattaccggg aaaaatcgtc
     4861 atcgttgaaa ttcgcctgcg cggttttcgg cgtacagcct acccgtgcga cttccttgcc
     4921 cctacgctcc acaacgacac cgctgctttc cgtatgagtc acggaatcga agcctgtcca
     4981 tacggtgtac ataaattcgc cgttttggaa tttcatcgtt gcccggcgtc cgctgcccat
     5041 gccttgccac ctgtcggaac gccccaacag gtcagctttg ctgttgcgta tggcaatttc
     5101 tttttttgcc gcactgccga acgaatattc gtaaagattg cggttgattt tttgaacttc
     5161 tatgtatttg ttgttgtccg ttttacagga aaataccgta tccgcccaca cggtttgggc
     5221 ggcagccgac agaagcaatg cggcagaaag gaacattttt ttcatcataa tttccttaat
     5281 ggttgaaacc ccgccattcg gacatccgtc cttcgtggca gcagcatcag attttatttg
     5341 aaaggggtgt aacccctttc aaattagggc aacacatagg gcggcgcttt atgtgtcgtc
     5401 ctgtgtgttg aaacatcatt gcccgtatcc tgaaatagaa ggctgtgttt taacaatccg
     5461 ttgattgctt aagatgaatt cacactaaaa aacagttctc tatttcatct attacggcgg
     5521 gttgttttgt ttataagggt ggtaatctac aaattgttac taaatagcaa ggtgtgaatg
     5581 aaacggcaga tataatcaaa atcttcttgt tggtcaaaat acggtaacat aatgcttttt
     5641 aatttttcgc ctttgggttt acgtccataa gaaaacagat agcggtttgc tgtaatacat
     5701 ttagcgtaat acagttttac ttctattggc atatcggact gtatgggtgt taatacggcg
     5761 acatcactat ttgctacaaa ttcacaagtt gaaacatagc tataagtatg gctaccttcg
     5821 ccattggtag aagtgaaaag cgtatggcat ggaaaaatat gtttttcatc aacgctatca
     5881 cgagcgatat aacttcgtag cgttcttgct tgcgtactgg caggacggat atagacaacc
     5941 gtgtcttttt gccgttgttc aaattctttt aatttggttg cggcaatgcc gttttgaata
     6001 gtaaaaattt catcaagtcg ttttgattgt cgaaccacag gcaaatcaag cggttctttt
     6061 aatttcggtt cggttacacc cgcagatgga tttaaattca cgctttcaac ccagcttggg
     6121 atctcatcca aagatggcac aaacagttgt cgtaacgtgc ggttagcttc cctaccgcaa
     6181 gcagaaaaac ggtaggcatt ggcaaaaata gcagcacaat aaaagagttt ttgttgttct
     6241 gtcatttctg ttttgggatt taaaacagca acattttgag ctgtataaaa tggtttgttt
     6301 tgtaaaaaag tagataaaac agaaccacct aatgcaacag ttaataatcc tgctggataa
     6361 ggttttgtat ttttcaataa atccacagat gctgttacac cattattttt gcctgacctg
     6421 cctacaaagt tgattgttgg attgaagctg ctcattttat tcaaatctaa ttttgaaccg
     6481 taactcacat caaaaatctc ttgcaattca accattattc atcgtctccg aagtcgttat
     6541 tgtcatcgtc ttcatagctt tcattatcca aattttcagt cggccctact tccgctccca
     6601 gtagttgaaa taaagcaaat tcacgcacga cttgctcaaa atctgctcgg gtaattttgg
     6661 aataatcagt ttccaaatag gcttcggcaa cccattcatc gttatcagtt acaaatgctg
     6721 ttaccgattc tcctgtgtga acttcgttgt ttaaataatg ttccaaccag cgcgctttaa
     6781 tgccctgcca gcggtcgtat aaatcaatgc gtcccaagtg tttggttttt tcaaaaccgt
     6841 catcacgcca gtagccaaac cacgttttgc gacaggcttt tttcgtgctg atttcttctt
     6901 gtgtgtccgg gtcaatcacg actgtctgaa aatgcggttt atgggcttca aatacgacaa
     6961 tgcacgttac cgtgccaact gggtaaaaca gttcgctcgg catagacatc acggctttta
     7021 agcgatgata tttcacaatt tcgcttttgg ctttgcttgg tgcaatcacg caactgactg
     7081 gaataatggc aatgcctgtg ccaccttctg ccaacatatc caacatttct ttgacaaaat
     7141 aaagttcatg caattcggca tcgcttttgg attgggcgta aggtggattg agaaagccaa
     7201 catttgggcg ttttaagcct gtttcaggtt tgggattttt gattaaatcc tgaaaatcag
     7261 tcatgaaaca actgctttgg tgtaaattgg ctttaccgtc tccgcgtaaa atcatattac
     7321 tggcggcaag agcaaacatt tttgggttgt tttcaatgcc aatcagttga tattttttag
     7381 agatggctta cccaaattgc taattctagc aacagattta ccgtctaaat tgataccaca
     7441 aggaacacaa acttgttctt tggaaatgcc acgtttcgtt gctctcgttc ctcgtttgtg
     7501 agcaggacgt ggcagattaa aatttttgtg gtgccctttg taagaaatcg tcgaataagt
     7561 ttcatcagct tgcacaatgc cgtctaactc aacttcattc atcatgtttt gaagtgcgtc
     7621 caaaattttg tgccgccaag taaacgcagt agcaagattg attttgcaaa tttcagcaca
     7681 tttgcgaagt gggtattttt caatcataca atgaatgtat ttttcccaaa cttcaatgtc
     7741 tttttgcgtg ttgtagagaa tagtgcctgt ctgctcaaca aaagactttt tacaatcacg
     7801 acacaaaaaa cgttggttgc cacaatcttt gccatttttg acgaaatgtg tagattggca
     7861 atgtgggcac ttcgtaactt ttcttggttc aatgactttt ttaacctgtt cttttgagct
     7921 gacagaagtc aaaaaagcct gtttatccgt atcggacaaa ttttcaaaaa gttgttttaa
     7981 aatgtctaat tcttttgtta cgcccgacat tataaaatcc cttatagttc aatttgttat
     8041 aagggatttt atcaaaaatt agtgcaaaaa tcaacggatt gttaaaacac agccaaatag
     8101 aaaagaaaat gcccgtttta cggtcttctt tccgacaaaa tgccgtctga aacgaatttc
     8161 agacggcatg gtcgaaaatt attgcgcggc aagcggtttg agcaggaggg tttcgccgct
     8221 ttgcacgaca ttttccagaa aatcgatgtt cggatgcttc cccggatggg cgcgcgcgtc
     8281 ggcaacatgt tcggcaaacc atatcaaacc ctgttctgcc gcttctttac ccaattttcc
     8341 atcaaaacgt tccgccaagg cattgtacag cttgagcgaa ccgagcttgc cctgaacggc
     8401 gggaatgtgg tgaaccgttt tgccttcggc atcctgaaca tccaaaccgc ccagatggtc
     8461 gattgaagga aatgtggcga gatagtcttg gaaattcata tcaaatccga aaatcagtca
     8521 gttagcgcgt gccgaaaatc ttgtcgcccg catcgcccag accgggaata atatagccgt
     8581 tttcgttcaa acggctatcc agcgcggcgg tataaatcgt aacatcggga tgcgcatcat
     8641 taacagcctt cacgccctca ggggcggcaa ccaagactaa ggctttgatg ttgcggcaac
     8701 ctttttcttt caacaggtcg atggtggcca ccatcgaacc gcctgtcgcc agcataggat
     8761 cgataatcaa agccggacgc tcgtccatac tgtccacaaa tttctcaaaa taggaaatag
     8821 gcttcagcgt ttcctcgtcg cgctgcaaac cgaccacgct gattttggca gtcggaatca
     8881 ggtcgagcac gccgtcgagc atacccaaac cggcgcgcag gatggggacg acggtcaggg
     8941 ttttgccttt gatgcggtcg ccttcaatct gtccgcacca tccgtcgata aggtattttt
     9001 caatttcaaa atcacggctt gcctcgtatg ccatcaggcg cgccaactcg gtggtcagcg
     9061 tacggaattt gtaggtgctg caatccgcct ccctcatcag ggtcagtttg tggcggacga
     9121 gcggatggtt gataacgtta acgttcatcg cggtgttcca gtgtgatttt gagacgcgtc
     9181 attatacttt tttttaattt gccggaaaag aaaatgccgt ctgaaacacg ttcagacggc
     9241 attgccgaat ccatcaggct ttcagcagct cttgcagctc gcctgcctca tacatttcca
     9301 tcaggatgtc cgaaccgccg acaaactcgc cgttcacata aagttggggg atggtcggcc
     9361 agtcgctgta ttccttaatg ccttggcgta cttcgggatt ttccaatacg ttgacagcaa
     9421 cgtaatcggt gcagcctgcc gcgttcagga tttgcacggc gcgggaagag aaaccgcatt
     9481 gcggaaactg cttcgtacct ttcataaaca atacgacgcg gtgtgtcgtt actacttctt
     9541 taatttggtc gtggatggaa gccatcgctt attccttttg ataaagttga caaaatttgt
     9601 caggtagggc gcattatacg caaaagcgga aacttcccac aatatttgcc gtatatcgcg
     9661 cagtatcaat gttgcgaacg gcaatattcc cactcctcga caatcctgct gtccggcaaa
     9721 tggcacaggg catatccgcc gccgctttcg tcttttttta cttcccgtct gccgcctttg
     9781 gcaatgcaga atttggaagc ggaatttgcc atgcctgtcc gaaacgtgtt ggcaggcagc
     9841 cggcagcagc gcggacatgc atacggatga attgccttca tggttttcct tatcgtcggc
     9901 acagggtcag acgacccgca tatcgggtac ttttttaaac agccggtaaa agttttccgt
     9961 cgtatatgcc gcaacctgtt ccaatgtttg attccgcaat ttggcaatat gttcggcagt
    10021 atgacgcaca aaagccggtt cgttctgcct gcctcgtttg ggaacggggg caaggaacgg
    10081 cgcatcggtt tccactaaaa tgcggtcgtc cggaacgtat ttcgccgcct cctgaaccaa
    10141 gggggcgttt ttaaaggtaa cgattcccga gaaagaaata taaagcccca aatccatggc
    10201 agcccgggca aaaccgacat cctcggaaaa acagtgaatc acacccgaat tggttttaca
    10261 ttcttttaaa atcgccaagg tgtccgccgc cgcatcgcgc gtatggacga taacgggcag
    10321 tccggtttga ttggctgctt cgatgtggtc tgcaaagcgt ttgtgctgcc aagacaaatc
    10381 gcctttgcac cagtaataat ccaaacccgt ctcgccgatg ccgaccactt tcggatgggc
    10441 ggcggcttcg accatttccg caatggaaaa ttcttcggct tccttgctgt cgggatgtac
    10501 gcctatggtg caatagatgt gttcgtgcgc ttcggcgacg gcaaagactt cggagaagct
    10561 ttccctactg acgctgatgg cgagtgcctg ccccacgccg tttgcttcca tgttggacaa
    10621 aacttcgggc aggcgttctt tcaaaccttc aaaattgagg tggcagtgcg aatcgatgat
    10681 atgcatagcg ttacatggta aacgtaggtc tgctgccgct gattgtgctg cccagttcga
    10741 cttcgatctg gtctttgact ttcaggcagt tttcgtgttt tgtgaatgcc agccccaccc
    10801 ctttgggttt ggaggaagta ctcgcaggat taatccaggc gaccttggtc ggcaggaaca
    10861 gtttggggaa gttgaggatt tctacggcaa gcagaatatc gtccccgatg gaaaatacgt
    10921 cgtcggtctg cacaaacaga ccgccgtgtt ccaaaaacgg catataggag ctgtacagca
    10981 gattcatgtc tttcagctgc aacgacatca tttttgccgg aatattttgt ccgtctgaca
    11041 taattcacct gttctctttc ttcaattcca aatagttgat gagcagatgc tcgatctgca
    11101 ttttgacatt taaagtatga aacccgtaag gggcaagctg tttgagcata tcctccgccg
    11161 caaatacatt gcgcggacgg aaacccgatg ccgtctgaag cagcctgtct tcataagcgg
    11221 gataatagac gggtttcatg tgttgcaggc acaagcctaa atcgaccagc catttctgca
    11281 tccacccgac aaatacggcg agcggaagtt tttccttatc gaaaagcgcg gcgtaatcca
    11341 aaatcttcaa caatctcggc tctgccaata tctccagcag ctttgccctc aattcccgaa
    11401 gctcgccttc ctcctgaaac agcggcgcgc ccgaatggaa agccagacgt tcctcaggct
    11461 ccgccacacc cctgtcgcgc agatacgcca atgcttcccc atgcgaagga gcgggcaaaa
    11521 ccttcttccg gcagcggctt ttaatggtcg gtaaaacctt gtccgccgcg tggcttacca
    11581 gcaaaaagac cacttgtggc ggcggctctt ccaacacttt caacaaactg ttggcggctt
    11641 ggacattcat actttccgca ggatgaatca ggatcacgcg caaaccgccc cgtaccgaag
    11701 tcaggtacac attatcgatg atttccctga cggcatcgat tttgatccgc aacagtttgc
    11761 gtccgttttc gggttcgtcc gccagaggcg tgatttcgta aaaatcggga tggcttcccc
    11821 gtccaaacag atggcaggac atacattcgc cacagggttt gcagcccggt gcaggggttt
    11881 cgcacaacag cgccttcgcc gcaaagcggg caaacgcagt cttccccgtc ccctttttgc
    11941 caacaaacag ccacgcatta ggacggctcg tccaatgctc ggcaatctgc cgccattgtt
    12001 cctgatgcca cggataaatc atgtcaaact gcccgtccgg aaatccatac cgccatcaga
    12061 gcagttccaa atcggggtcg gaactttgtg ccctgcggct gcgcaactgt accgccaaac
    12121 gcaaatcatg tgcggaatcg gcatttttca aggcatcctg caaggaaatc tcgccttttt
    12181 catacaattg gtaaaggtgt tggtcgaagg tctgcatacc cagggtagtg gattttttca
    12241 tcacttcttt gatttcatgg atgttgccgt tgtgaatcaa ctccgaaatc aggggcgaat
    12301 tgagcagtac ctcgactgcc gccaccctgc ccttgccgcc gtctcgcgga acgaggcgtt
    12361 gcgaaataaa cgcctgaagg ttgagcgaca aatccgtcag caattgttcg cgccgctcct
    12421 cggggaagaa gttgatgatg cggtcgagcg cctgattggt gctgttggcg tgcagcgtcg
    12481 ccatacacaa atgccccgtt tcggcaaagg cgatggcgta gtccattgtt tcacggtcgc
    12541 ggatttcgcc gataaggatc acatccggcg cctgacgcag cgtatttttc aacgccgcca
    12601 tccagttttc cgtgtccacg ccgacctcgc gctgggtaat gatgcagttt ttgtgttcgt
    12661 ggacaaactc gatcggatct tcgatggtga tgatgtgtcc gaacgaattt tcattgcggt
    12721 agtcgataag cgaggcgagc gaagtcgatt tgcccgagcc ggtgccgccg acaaaaataa
    12781 ccagcccgcg ttttttcagc gcaacatcct tcaaggccgg cggcaggttc agactttcaa
    12841 acttgggaat cttgctggta atcgcgcgga ataccaacgc cgtcgcaccg cgctgtatca
    12901 tcgcattgac gcggaagcgg ctggtgtccg gcaggctgat ggcgaagttg cactcgttgg
    12961 tcgatgaaaa ttcttccgcc tgcttcgcac tcataatcga aaaggcgatt tccatacatt
    13021 tttccgccgt cagcggttcg tccgtgatgc gggtgatttt gccgtccagc ttcatagcgg
    13081 gcgggaaatg ggtcgtcaca aacaggtcgg aacctttgtt tttgttcata tggcgcagcc
    13141 atgcgaacag ttcttccttt gcagtcatat tttcatcggt aaacatcctc gtcccccaat
    13201 cttcaaacaa tctgtacctt cccattctac caaaaatccg ccgtgctgtc tgaaaccgtt
    13261 tcagacggca cggacaaacc gcctccactc aatcctgccg tgttagcgtg tataattcgg
    13321 cgttctatcc gaaattcaca gcaggttagc aatatgtctt tgaaaacagt agccgttatc
    13381 ggcgcgatgg aacaggaaat cgagcttttg cgcgagatga tggaaaatgt caaagccgtc
    13441 tctttcggca gattttccgc ctatgaaggc gaattggcgg gaaaacgcat agtgcttgca
    13501 ttgagcggca tcggcaaggt caacgcggcg gttgcaacgg cttggcttat ccgtcaattc
    13561 gcaccggact gcgtcatcaa caccggcagc gcaggcggtt tgggcaaggg tttgaaagtc
    13621 ggcgacgtgg tgatcggcac ggaaaccgag caccacgatg tcgatgtaac cgcattcggc
    13681 tatgcccggg ggcaagtgcc gcaactgccg gcaaggttcg cttcagacgg catattgatt
    13741 gaaacggcaa aacgggcggc gcggacgttt gaaggcgcgg aggtagaaca aggcctgatt
    13801 gtcagcggcg accgctttgt ccacagcagc gaaggcgtgg cggaaatccg caagcacttc
    13861 cccgaagtca aagcagtgga aatggaagcg gcggcgattg cccaaacctg tcatcagttg
    13921 gaaacgccgt tcgtcatcat ccgcgctgtt tccgattcgg cggacgaaaa ggcagacatc
    13981 agctttgaag agtttttgaa aacggcggcg gcaagttctg caaaaatggt ggcagaaatc
    14041 gtcaaatctt tataaaacct ttatcaaatc atgccaaaac agcggttttc cgttagaata
    14101 tcgggctatt tccacgttgc gcccgatatt cggacgtacc gctgtttgtt cagacggcat
    14161 ttctaaaacc taccgttcag cattaaaaac aactcaatga aaaatatccg aaatttctcc
    14221 atcatcgccc acatcgacca cggcaaatcg acgcttgccg accgcttcat ccaatattgc
    14281 ggcggtttgg atttgcgcga aatgagtacg caggtgctcg attccatgga catcgaaaaa
    14341 gagcgcggca tcaccatcaa agcgcaaacc gccgcactca actacaaagc acgcgacggg
    14401 caggtgtatc agcttaattt gattgacacg ccgggacacg tcgacttctc ttacgaagtt
    14461 tcccgttcgc tgtcggcttg cgaaggcgcg cttttggtcg ttgacgcgtc gcagggcgtg
    14521 gaagcgcaaa ccgtggcgaa ctgctatacc gcgattgatt tgggcgtgga agtcgtgccc
    14581 gttttgaaca aaatcgacct gcccgccgcc gaccccgagc gtgtggaaca ggaaatcgaa
    14641 gacatcatcg gcatcgatgc cgtcggcgcg gtgcagtgtt cagccaaaag cggcatcggc
    14701 gtggaagacg ttttggaaga aatcgttgcc aaaattcctg cgccgaccgg cgacgaaaac
    14761 gcgccgctgc aagccgttat cgtcgattcg tggtttgaca attacgtcgg cgtggtcatg
    14821 ctgattcgag tgaaaaacgg caccatcaaa ctgaaagaca aagtgcgctt tatgagcacc
    14881 aaggcggaaa cgcaggtcga gcagctgggc gtattcacac cgaaatcggt tcaaaaacaa
    14941 gaactaaaag ccggcgaagt gggttttttg attaccggcg tgaaagaatt gggacaggcg
    15001 aaagtcggcg atacggttac tttggttgcc aaccctgcca ctgagccgct gcccggtttc
    15061 caagaagtac aaagccaagt atttgcgggt ctctatcctg tggaaagcca cgattacgaa
    15121 gccttgcgcg acgctttgga aaaattgcag ctgaacgatg cttcgttgaa attcgagcct
    15181 gaagtttctc aagcattggg cttcggcttc cgctgcggct tcttaggcct gctgcattta
    15241 gaaatcgtgc aggaacgctt ggaacgcgag ttcgacatgg atttgattac caccgcgccg
    15301 acggtggttt acgaagtcgt gttgaaaagc ggcgaaaaaa tcgaagttga aaacccgtcc
    15361 aaactgcccg acatcggcag catcgaaacc attctcgagc cgattattac cgcgaccatc
    15421 cttgtgccgc aggaatacgt cggcaacgtc atgactttgt gtaaccaaaa gcgcggcgtg
    15481 caggtcaata tgcagtatat gggccgccaa gtgatgctga cttacgactt gccgatgaac
    15541 gaagtcgtaa tggacttttt cgacaaactc aaatccactt cgcgcggtta tgcttcgttg
    15601 gactaccatt tcaaagaatt ccaaccgtct gatttgatta agctcgacat tatggttaac
    15661 ggcgaaaaag tcgatgcctt aagcctgatt gtacaccgtc aaagcgcggt tcacaaaggc
    15721 cgcgagctgg catcgaaaat gcgcgaactg attccgcgcc aaatgttcga catcgccgtc
    15781 caagccgcca tcggcagccg gattatcgcc cgagaaaacg ttaaagccct gcgtaaaaac
    15841 gttttggcga aatgttacgg cggcgatatt acgcgtaaga aaaaactgct tgaaaaacaa
    15901 aaagcaggca aacgccgtat gaaacaagtg ggcaacgtgg aaattccgca aagcgcgttc
    15961 ttggcgattt tgcaggtgag cgacaaataa tatttcggca catagggcgg gcgcgtcggg
    16021 aacacctctc aaaccgccct gatttcagcg gcacgcgccc gcaaacaaat tttgcaattt
    16081 gccgccttaa aacggttgca cggccgggcg ggtttttaac cgttaaggaa caacaatgaa
    16141 cacaatgcta atgtcgggcg cggctgccgc gctgcttgcc ggcatcatcc tttatttcaa
    16201 aagcgacaag aaacggcagg aaaacggtga atggagttcc ggcctcgaat acgcctatat
    16261 cctgacggcg gtcggtgtgt ttgccgcttt gtccctgttt atgagcttta ccgccgtttt
    16321 cctgattttc gttgtattgt gcggtacggc ttggggggta tataaatacc gcctgaagac
    16381 tcatcccgaa atctcggaaa gcagccactt cggcgattat ttcggcagtt tcttccctac
    16441 cgttttggta ttgttcctca tccggtcgtt tattgccgaa ccgttccaaa tcccgtccag
    16501 ctcgatgcgc ccgggattaa tcaagggcga tttcattttg gtcggcaaat tttcctacgg
    16561 cctgcgcgta cccgttttaa acaatgtatt catccccacg ggcaaaatcg aacggggcga
    16621 tgtcgttgtt tttaactatc ctttgcagcc ggagatgacc tacatcaagc gtattgtcgg
    16681 catcccgggc gacattgtcg aatatcgaga taaagttttg acggtaaacg gaaaaccggc
    16741 ttccgacatt cctgacggca cataccgtta tcctgacgat accgacccat ccgaaatcca
    16801 caacacggat atgttccgca gcggtctgga cggcaaatcc ttcaatattc tgaaaaaaga
    16861 aggacagcct gccgtttccc tgcccgtatt gggcaaatat acctccgata ttatgtctga
    16921 aaacggatat tccatagatc aaagcggtct gaaccattgc caatatgccg acgacggcag
    16981 cggtttcgtg tgcaaagttc ccgaaggacg ctatttcgct atgggcgaca accgcgacaa
    17041 cagtgccgat tcgcgctact ggggctttgt ggatgacaag ctggttgtcg gcaaggcaat
    17101 gttcattttg atgaacttcg gcgatttcgg cagggccggc acggcaatcc gttaagccgg
    17161 aaaattacgc cggaacatca aaaatgccgt ccgaaccctg tttcagacgg catttttatc
    17221 atcaaacgcc ttgtttccct accggcagcc tcggggataa tatagtggat taaatctaaa
    17281 ccagtacagc ctggcctcgc cttgccgtac tatttgtact gtccgcggct tcgtcgcctt
    17341 ggcctgattt gaatttaatc cactatatgc accgccttgc cggcattatc gatatgggcg
    17401 gcacatatgg attgcctgga aaaatgatgc gttcgggcgg cgtatgattt gcctgtgttt
    17461 aaatcatcgg ttgattttat ccgtcggcaa gtgaaaagcc ggttatttcc gtttgtgtgg
    17521 aaacccatcc cattgaataa agggcatttc gtccgactga cggtgtgggc ggcatatgga
    17581 aatacggaca ttattttagt tgcattgcca ttcctgcgga ggcggctttt ttgattctgc
    17641 ccgccccgat gccgtctgaa agggcttcag acggcatttt ccgctccgcg ccgttgtcgg
    17701 catgtttggt cttgccggtt ttgactgcct gccagtccaa tcgtacgcag gtttgccacg
    17761 gcagaaaatc tgatgccgac cggagtcaaa gctcggacgg ctgtttcagc gaaccgaggt
    17821 aaatcgccga aagcgtcagc accacccctg cccactgcac gccttcaatc gttttgccca
    17881 atccgaaata atcgatgaac agggcggcga ccggttcgga caaaagcaac agccccgtca
    17941 gcgacaggga aagcagcgga atcgcatagg caaccatcgc ccacgcaaaa cactgcatca
    18001 ccacgccccg tacacaagca ccaaacccga atctttccaa gtggtcggat aaagtgcgcc
    18061 gccgtccatc agcaatgccg gaacaatcgg cgatgccgcg ccgcccaaac tcaaaatcat
    18121 cattgaaggg aaaagcgcca cctgttcgac ttcatgagtc ttgcggacga acaccataga
    18181 tagggcaagc atcagcccgg acaccaaacc gctggcgaat ccccaaaccg cattaccgtt
    18241 gtagccgaat tccgcaccgg caatcatcgc cacgcccaca accgccgaca tcaagcttgc
    18301 cgcctgcagc ctgcccaaac gctcgccgaa aaagaaaaca ccgattgccg acaagaaaaa
    18361 gatttgcagg ctgttgagca gggtggaaat acccggcccg accgcgtgta tgctttcgtg
    18421 ccaaagtgcc aaatcgaaag cgagaaacac gcccgccgtc agggcatatc ggacggtttt
    18481 tctgtttttt gggaattttt gtccgaaaaa ccgtgccaaa aaccaaaata cgaataccga
    18541 aatcagcaac cgccaaaatg cgattgcata cgggccgacg gggacggatc tgacaatcag
    18601 gctgcccaat ccgaacaccg cgcaacccag caccagcaat ggtgcggcat atttttttcc
    18661 gttaccgacc acaatatccc ctcccttccc catatggctg ccgcgccgcc ggcaaaagtg
    18721 ccgccattcc gaaaatatgc cgtctgaagc ccaaagcccc ggctgcgccc ggacaaacgg
    18781 ctgactttac gggcaggccg gctattttcc gttggggcaa aatccgtcct gccggataaa
    18841 acccgaataa aaaatatttc cctcaagcaa tgcggcggcg ccaacacctg attaaaacac
    18901 aaccggcgtt ttcggtatat atgcaaaaac gcattttccg gcacggcgtt acaccgatac
    18961 cgaaaaatgc gtctgaatgt ttcgacaatc cgattaaagc attatgccaa atctgcaaaa
    19021 agtggcgtag agagatagcg ttcgccataa gaaggcagca gcacgactat cagcttgcct
    19081 tcgttttcag gctgtttggc aagctgcaac gcgctccaaa ccgccgcacc ggaagaaatg
    19141 cccgccaaaa tgccttcttt ttccgccatt gcacgggcgg tttcaaaagc cgcttcgttc
    19201 ggcactttgg taatgctgtc gtagatttcg gtattcaaaa cggtcggaat aaaacctgcg
    19261 ccgatacctt gaatcgggtg cgggcctttt tcgccgccgc tcaatacggg ggaagcctca
    19321 ggctcgacgg caaccacttt aacttcgggt ttgtattttt tcaatacttc gcccacgccg
    19381 gtaatcgtac cgcccgtgcc gacgccggca acgaagacat cgactttacc gtcggtatcg
    19441 ttccaaattt cctcggcggt tgttttgcgg tggacttcgg gatttgcctc attgtcgaac
    19501 tggcgcggca taaaataagt gtctggatga gcgtctacca aggattgcgc tttggcaatc
    19561 gcgcccgcca taccttcggc ggcgggggtt agaatcagtt ccgcgccaaa cgtgcgcaac
    19621 agcattttgc gctctttgct catgctttcc ggcatggtaa tcgccagttt gtagccgcgt
    19681 gcggcacata ccattgccaa accgataccc gtattgccgc tggttgcttc gacaatgacg
    19741 gtgtttttgt tgatttttcc cgctttttcg gcggcctcga tcattgcttc ggcaatgcgg
    19801 tctttgacgc tgctgcccgg attaaaaaat tccagtttca cggcaacctc tgccttcaaa
    19861 cctttggtca aacggttcag tttgaccaaa ggcgtgttgc cgatcaattc ggtgatgctg
    19921 tttgcaattt tcatcttctg ctcctgaata ataaggtttc gacagtaagg cgcaatcccc
    19981 atcggtatcc tgtccgattg caggggattt gcgccgaacc ataaacaaat ttcggatata
    20041 gctttatcct aaacctatgc cgcctaaaaa accaataccc aaaatttatt tctttataac
    20101 tttttgttcc gatacagacg gcatcacaat catctgccga tttcggcaag cagcatcgcc
    20161 gttaccgcaa cctgcatcaa catcgccgcc aacacgccga gtcgcagctg cgaaccgccg
    20221 aacgttgacg gcggctgccg gtctataccg cagcggtgga cataggcaac cgccatcaat
    20281 acaaactgca acacgaacca ataaaccggc ttcagcgcat aaagtttgag caatgccgca
    20341 aacacaaaca cttgaaccgt tcccgaaaag caataatgca ccaacgcaca tattccgaca
    20401 aaagcaagcg tcatcgatac attactgacg gcaaaaagcc cgagcagcgg atgttcgggg
    20461 tctgcctgcc atccgtttcc atctgttttc cggttccaat acccgatgaa aaaaaatatg
    20521 ctgcccaaag tcaggtaaaa atgggggatg aacaaaggcg cggcgcgggt cattccccac
    20581 atccccggca tcagctttac ccctaaaacc gagatgccga gccacaacgc aatactcgcc
    20641 caaaaccatt gcaacattcc tgcgcggaat atcagaaaca gaaaaaccgc cgcatacagt
    20701 aaggcagaca aaaaatccaa atgcagcaaa atcatgaata cgccaactcg ccttcaaaca
    20761 cggtttccgc agggccggtc atcatcacat cgccgccgca ggcccattcg atatataaag
    20821 tcccgcccgg caaaaccacc tctaccgttt tcccttcatc caacagcccc agacggatac
    20881 ccgccaccac agccgcacac gcgcccgtac cgcacgcttg ggtttcgccc acgccgcgct
    20941 cgaacacgcg caaacggatt gccgtccgtc cgacaacctg cataaagccg acgttgacgc
    21001 gttcgggaaa ctgcctgtgc ggttcgatac gcgaaccggt ttcgcgcacc ggcgcgcatt
    21061 ccacgtcatc gactacaatc acagcatgag gattgcccat attgacgcag ctgacaggct
    21121 gaatgccgga ttcgagatgc accccgtaaa tacaggcatc atccccctcg cccgattcgg
    21181 ggacaaacgg tatttcagac ggcataaact tcggtttgcc catattgacc gtaaccatgc
    21241 cgttatcgga caatttcgga aaaataatgc ccttggccgt ttcaacacaa atttctttct
    21301 tatcggtcaa acccttgtct gcaacaaaac gggcaaaaca acgcgctccg ttgccgcatt
    21361 gcccgacctc gctaccgtcg gcattgaaaa tacggtaacg gaaatccacg ccttcggttt
    21421 ccgaacaccc gaccaccaaa agctggtcga agcccacgcc ccggaagcgg tccgcccatg
    21481 ccgcaatcgg cacgtcctcg ggggtaaaat cctgactgac cgcgtcaatc accataaaat
    21541 cgttgcccaa accgtgcatt ttggtaaatt tcaaagtttt catattgttc cgaaatcccg
    21601 tattgtctgt tgcttccgaa tccgaaatcc ccgagcccga agggaaatgc ttccatctcc
    21661 cgccgcctga ggattaaaat gagccattat actgtttgtt accccttaca agaaacacaa
    21721 tgtcccgcct gttcctgctg cttttccctt gggcaaccct tgccgcctgc acccgaaaca
    21781 taccggcaag ccccgccgtt tcaaattgcg cgcatcttca caaccgcacc gtcctgtatt
    21841 ttgacgcaca cggcaaaccc gccgacagca cagcaaaggg cggattttac aggaccgtcg
    21901 aaattcatga cacaaaccgc atccttattc aagactttaa cagcacgggg aatgccctcg
    21961 tcaaacccta ttggtcggac tgccggaaat tgtccgtttt ccccgacaaa catctgacca
    22021 tgagccatcc atgaaccacg acatcacttt cctcaccctg ttcctgctcg gtttcttcgg
    22081 cggaactcac tgcatcggta tgtgcggcgg attaagcagc gcgtttgcgc tccaactccc
    22141 cccgcatatc aaccgctttt ggctgattct gctgcttaac acaggacgga taagcagcta
    22201 tacggcaatc ggcctgatgc tcggattaat cggacaactc ggcatttcac tcgaccaaac
    22261 ccgcgtcctg caaaatattt tatacacagc ctccaacctc ctgctgctct ttttaggctt
    22321 atacttgagc ggtatttctt ccttggcggc aaaaatcgag aaaatcggca aaccgatatg
    22381 gcgcaacctg aacccgatac tcaaccggct gctgcccata aaatccatac ccgcctgcct
    22441 tgctgtcgga atattatggg gctggctgcc gtgcggactg gtttacagcg catcacttta
    22501 cgcgctggga agcggtagtg cgacaaccgg cggactgtat atgcttgcct ttgcactggg
    22561 tacgctgccc aatcttttgg caatcggcat tttttccctg caactgaaaa aaatcatgca
    22621 aaaccgatat atccgcctgt gtacaggatt atccgtatca ttatgggcat tatggaagct
    22681 tgccgtcctg tggctgtaag ccccattcat tcccgatacc cgtaaaaaat accgtctgaa
    22741 acctgttcag acggtatttt caccctaagc gttactcggc ggcattttct tcacggacag
    22801 gcgcatccag cagggctttg atggacagac ggacacggcc tctgtcatcc acttccaatg
    22861 ctttcacgtt caccacctga ccgacttgca ggtaatcgcc gacattgcgt acgcgctcgt
    22921 gtgcgatttg gctgatgtgt accaaaccgt ctttgcccgg catcacgctg acaatcgcgc
    22981 cgacgttgtt gtcgaggatt ttaaccacag taccttcgta cactttgccc acttccactt
    23041 cggcagtgat ttcttcgatg cgttttttcg ctgcatcgcc cgcttcttga gtagtcgcag
    23101 cgatagtgat ggtaccgtct tcagcgatat tgatttcagt accggtttca gcggtaatcg
    23161 aacgaatggt ttcgccgcct ttaccaatca catcacggat tttgtcttgg ctgattttca
    23221 tggtgaacaa acgcggcgcg tgtgcggaca gctcttgcgg acccgcaacg gcagctttca
    23281 tctgatccaa gatgtgcaaa cgcgcttctt tggcctgtgc caaagcaatt tgcataatct
    23341 ctttggtaat gccttggatt ttgatgtcca tttgcagcgc ggtaacgcct tcggtcgtac
    23401 cggccacttt aaagtccata tcgcccaagt ggtcttcgtc gcccaaaatg tcggtcagga
    23461 cggcaaactt attgccttcc aaaatcagac ccatcgcgat accggcaacg tgtgctttca
    23521 aaggcacgcc ggcagacagc aggctcaaac agccgccgca gacagaagcc atagaggaag
    23581 agccgttgga ttcggtaatt tcggagacca cgcgcatggt gtagctgaaa tcttcaggtt
    23641 tcggcaatac ggccaacaac gcacgtttag ctaaacggcc gtgaccgatt tcacggcgtt
    23701 tcggcgcgcc catgcggccc acttcgccgg tagagtacgg cggaaagttg tagtgcagca
    23761 taaagcggtc ggtatattcg ccggacaacg cgtcgatgat ttgttcgtcg cgcgaagtac
    23821 ccaaagtcgc tacggcaagg gcttgggttt cgccacgggt aaacagtgcg gaaccgtgcg
    23881 tgcgcggcaa tacgccggtt tggatgttca gcggacggac ggtgcgggtg tcgcggccgt
    23941 cgatgcgcgg ttgtccgtcc aaaatttggc tgcggacgac atcggcttcc aagcgtttga
    24001 aaataccttt gatttcgttg gctgccagcg tatcggtttc ttcggtaatc aaggcttctt
    24061 ttaccgcatt ccaagcctcg tccaatttgg cggaacgcgc ttgtttttga cggattttga
    24121 acgcttcttt aatggtttcg ccggcaatcc cgcgtacttt ggcaaccagt tcttcattgg
    24181 tttcaggtgc tttccaatcc caaacttccg gattcacttc gtcggcaaat tcattgattg
    24241 cattgatggc aacctgcatt tgatcgtggc cgtaaaccac cgcgcccaac atcacgtctt
    24301 cgggcaggat tttggcttcg gattccacca tcaacacggc tttggaagta ccggcgacca
    24361 ccaagtccaa ttgtgatttc gccaactcgg ctttagtcgg gttcaaaacg tacacgccgt
    24421 ttatataacc cacgcgcgcc gcgccaatcg ggccggcgaa cggtacgccg ctcaacacca
    24481 gcgcggcgga cgcgcccaac attgcaggaa tgtcggaatc gatttcggga tcgacggaca
    24541 caaccatcgc tacgatttgg atgtcgtggt agaaaccttc ggggaacagc ggacgaatcg
    24601 ggcggtcgat cagacggctg gtcaggattt ctttttcgct ttgtttgcct tcgcgtttga
    24661 agaagccgcc ggggattttg cctgcggcat aagtgcgttc caaataatcg acggccaacg
    24721 ggaagaagtc ctgaccttct ttgacctctt tgttggtggt aacggcaaca aaaacaacag
    24781 tgtcgcccat cgatacttta acggcagcgg cagcttggcg ggcaatttcg ccggtttcca
    24841 aagtaacggt ttgattaccg tattggaagg tcttaacgta tttattgaac atcattgttc
    24901 ctttcaaaat accgcactgc taaaacacta ataatgcaca ctaaaatccg aatgtgcata
    24961 gttagggttt cagaccgtgc ggcaggttgt aaacaagctt tcagacggca tttcggacgc
    25021 tgaaagcaat tgcggattat aaaggcaacc atccttaaaa tccagtattg atacaataaa
    25081 aaggccgtct gaaacatatc cttttcagac ggccttcagt cttcaaaatc aatcttgtgt
    25141 cagtaaagtc aatgcttcct gatatttctc gaccgttttc cgaattacat cggcaggcac
    25201 tttaggcgca ggggcttttt tgttccaacc gctttgttcc agccagtcgc ggacgaattg
    25261 tttgtcaaaa gacggcggat tggtgccgac ttcatattga tccgccggcc agaagcggct
    25321 cgaatcggga gtcaatacct catccatcag cgtcagcgta cctttttcat ccaaaccgaa
    25381 ttcaaatttg gtatcgcaaa tgatgatgcc gcgcgatttg gcatattccg ccgcttcggt
    25441 gtaaagccga accgctttgt cgcgcacttc ttccgccaat tctttaccga taatgcgtcc
    25501 gcattcttca aagctgatgt tttcatcgtg atcgccgact gcggctttag ttgagggcgt
    25561 aaaaatcact tcgggtagtt gttgcgcttc ccgcatacct tcgggcagcc gaataccgca
    25621 aaccgagccg gttttttgat aatctttcca accgctgcct gccagataac cgcgcacaat
    25681 ggcctccact ttcaccggag tgagtttttt agctacaacg gcgcgttttt ccaaagcttt
    25741 ggcttcgttt tcaggcaaaa catcgtacac ggtatcgccg gtgaaatggt tgggcataat
    25801 atgcgccagt tttttaaacc aaaaattgga aatctgcgtc aggatttcgc ccttacccgg
    25861 aatcggggcg tccaaaatca catcaaacgc ggacaggcgg tcggaagcga ccatcagcat
    25921 acgtttatcg tcgatttcat ataaatcgcg cacttttccg gaataaatct ttaccaaacc
    25981 aatctcactc atttcgcacc cccctgaaaa tatcttgaaa ataccgaccc gacaggtttg
    26041 aatcgcaaac cgatattcta gccgaagtcg gcgcaaaaca atacccatgg cacaaaaagc
    26101 caacccgtca accgtcggca aagttttggc actataatac cgacagcaag tcctacaata
    26161 cactttcacc aaaggaaata cctcatgaga atcctattga caggctcgaa aagccaactg
    26221 gcacactgcc tgcgcgaccg tcttcctgaa gactgggaaa ccattgcgac ggattccgca
    26281 tccctagaca ttaccgatgc cgatgccgtc tgcaacatgg tcaaaagttt ccaacccgac
    26341 gctattgtca acacggctgc ctatactgcc gtcgacaaag cggaaggcga tgcggcagcg
    26401 gcatttgccg tcaatgcttc cgccgtttac aaccttgcct tggcagcaca tcgcgcccat
    26461 gcccgattca tccacatctc aaccgactat gtctttgacg gaaaagggaa aataccccat
    26521 caggaaagcg actttaccaa cccttccaat gtatacggac aatccaaaac cgccggcgaa
    26581 ctgctcgcac tgtctgccaa tcccgacagc cttatcctgc ggacttcttg gctgtttagc
    26641 gaatacgggg acaactttgt ccgcacgatg ctgaaccttg cgcgggaacg ttccccgctg
    26701 tccgccgtcc acaaccaaat cggctgcccg acctatgccg gcgacttgtc cgccgccatc
    26761 atccgcctgt tgcagcagtc caatcccgtt cgcggcattt accactacgc cggcggcaaa
    26821 tccgtatcct ggtacgaatt tgcccggcac atctttcaga cggcattgca acaggatgcc
    26881 tcttttcccg ttcccgaact gaaagccgtt tcggatgaag gctctgcggc tgccgccccc
    26941 aggcccgcat acagcatttt ggactgccgc aaaatcgaaa acgacttcgg catcaaaccg
    27001 tcagactggc aaaaagccct tgcacaggtc gtttccaagc tgctctgatg ccgcccgccc
    27061 ctccgtttcc tccgccaagc accgccttgg cggttttctt ataaaatcta ctgattacac
    27121 aaacacatat catctttaca caatcatgct tccatcaaca gcaaaacatg at
//
LOCUS       DAXGCP010000018        26920 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.018, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000018 DAXGCP010000000
VERSION     DAXGCP010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26920)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26920)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26920
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.018"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..339
                     /locus_tag="ACFJCW_000676"
     CDS             <1..339
                     /locus_tag="ACFJCW_000676"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC4150887.1"
                     /translation="GFVNNVSEVIKAHHIFVLPSYREGVPRSTQEAMAVGRAVITTDV
                     PGCRETVADKVNGFLIEPWNPRILAEKMIYFIENRAAVRLMGNASYAIAKDKFDAEKV
                     DLKFLDILKA"
     gene            complement(722..1572)
                     /locus_tag="ACFJCW_000677"
                     /pseudo
     CDS             complement(722..1572)
                     /locus_tag="ACFJCW_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
     gene            1922..3436
                     /gene="katA"
                     /locus_tag="ACFJCW_000678"
     CDS             1922..3436
                     /gene="katA"
                     /locus_tag="ACFJCW_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HFC4150888.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLTQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPASYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRSQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGIGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFDNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
     gene            3951..4517
                     /locus_tag="ACFJCW_000679"
                     /pseudo
     CDS             3951..4517
                     /locus_tag="ACFJCW_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
     gene            4739..5902
                     /locus_tag="ACFJCW_000680"
     CDS             4739..5902
                     /locus_tag="ACFJCW_000680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c peroxidase"
                     /protein_id="HFC4150889.1"
                     /translation="MSFKLRYLASVLALSSLLAACGGQEKSAAGDASPASETEAASQV
                     QASEAVPSASSASPEDQDLLKRAQGVFQPLPTVEEMQKIRPFTEEQVKLGHQLWYEPR
                     LSKGNTVSCNSCHNLASAGVDNMPTSQGHKGQFGGRNSPTALNAALLGSQFWDGRAAD
                     VEEQAGGPLVNPVEMANDSQEAAAAKIAKVPEYQEMFKKAFPEDGAVSFKNITTALGA
                     FERTLLTPTKWDEYLKGNVNALSEQERKGVRAFMDNGCIACHNGVNLGGTTFQKFGLV
                     QGPYWKFIEDPKRDKGRADVTKKTEDEFFFRVPGLRNVAKTYPYFHNGSVWELDKAVT
                     IMGKAQLGKDIPKEDVDNIVVFLNALSGNVSESARTMPELPLTAPMESKPDNK"
     gene            complement(6483..8519)
                     /locus_tag="ACFJCW_000681"
     CDS             complement(6483..8519)
                     /locus_tag="ACFJCW_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HFC4150890.1"
                     /translation="MIDNALLHLGEEPRFNQIKTEDIKPAVQTAIAEARGQIAAVKAQ
                     THTGWANTVERLTGITERVGRIWGVVSHLNSVVDTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFATLSPAQKTKLDHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYAGNRELREQIYRAYVTRASELSNDGKFDNTANIDRTLENALKTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFAREHLGLADPQPWDLS
                     YAGEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFAEKTVPVWHKDVRYF
                     ELEQNGKTIGGVYMDLYAREGKRGGAWMNDYKGRRRFADGTLQLPTAYLVCNFAPPVG
                     GKEARLSHDEILTLFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSAHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSESDECR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFANSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(8607..9479)
                     /locus_tag="ACFJCW_000682"
     CDS             complement(8607..9479)
                     /locus_tag="ACFJCW_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HFC4150891.1"
                     /translation="MEIWNMLNTWPDAVPIRAEAAESVAAVAALLLARALLLNIRFRR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RYLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNHPAGSETL"
     gene            9745..12135
                     /gene="gyrB"
                     /locus_tag="ACFJCW_000683"
     CDS             9745..12135
                     /gene="gyrB"
                     /locus_tag="ACFJCW_000683"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HFC4150892.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKI
                     VGDSDKKGTTVRFLAGTETFGNIEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSGEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVATLITALGAGIGKEEFNPEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDGRTIEGAELADTAKQFLLAKTVIEQESRFVDELVLRAMLHASPIDLTSSENA
                     DKAVAELSGLLDEKEAALERIEGHEGHQFIKITRKLHGNVMVSYIEPKFLNSKAYQTL
                     TQTAAALKGLVGEGAKLYKGENEYDADSFETALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            12234..13619
                     /locus_tag="ACFJCW_000684"
     CDS             12234..13619
                     /locus_tag="ACFJCW_000684"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HFC4150893.1"
                     /translation="MISIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQTARIAIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLGRIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGTVLKEQVYYSVGGGFVVTEEDFEWQSETEK
                     AVPYPYNSCAGLLARCRLNRLGISEVVLANEAALAGCGEAEIRRRVAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(13690..13788)
                     /locus_tag="ACFJCW_000685"
     CDS             complement(13690..13788)
                     /locus_tag="ACFJCW_000685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HFC4150894.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(14360..14436)
                     /locus_tag="ACFJCW_000686"
     tRNA            complement(14360..14436)
                     /locus_tag="ACFJCW_000686"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14400..14402),aa:Asp,seq:gtc)
     gene            complement(14469..14544)
                     /locus_tag="ACFJCW_000687"
     tRNA            complement(14469..14544)
                     /locus_tag="ACFJCW_000687"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14509..14511),aa:Val,seq:tac)
     gene            complement(14584..14660)
                     /locus_tag="ACFJCW_000688"
     tRNA            complement(14584..14660)
                     /locus_tag="ACFJCW_000688"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14624..14626),aa:Asp,seq:gtc)
     gene            complement(14693..14768)
                     /locus_tag="ACFJCW_000689"
     tRNA            complement(14693..14768)
                     /locus_tag="ACFJCW_000689"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14733..14735),aa:Val,seq:tac)
     gene            complement(14838..16814)
                     /locus_tag="ACFJCW_000690"
     CDS             complement(14838..16814)
                     /locus_tag="ACFJCW_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HFC4150895.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPELEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVEAMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVVTLNNMHETQHVLDNVLSMHPNMPVYARATN
                     DDYVKTFTDMGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            16960..17799
                     /locus_tag="ACFJCW_000691"
     CDS             16960..17799
                     /locus_tag="ACFJCW_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HFC4150896.1"
                     /translation="MTATAADLDRLLPQTQCRECGYEGCLPYARAMLRGEAHNLCAPG
                     GATVVRDLAALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVITDECTGCGLCVAPCPVDCIHMKPVADTVLPRARRFSLSDDSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRQGYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            17998..19029
                     /gene="gap"
                     /locus_tag="ACFJCW_000692"
     CDS             17998..19029
                     /gene="gap"
                     /locus_tag="ACFJCW_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC4150897.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTIHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGS
                     FTSKEKAKIHLESGAKKVLISAPGGDDVDATVVYGVNDSVLTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKGRLDGLAIRVPTVNVSLVDLSLQAARDTTVEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMVKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(19284..20009)
                     /gene="aat"
                     /locus_tag="ACFJCW_000693"
     CDS             complement(19284..20009)
                     /gene="aat"
                     /locus_tag="ACFJCW_000693"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HFC4150898.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFSRDGWFFWYAVGPRAVIVPERLHVPRSLAKTLRNGSYRVAVNGCFAEVVAHC
                     AAAARPNQDGTWIAPEFQTAYLKLHEMGHAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLADLGVELIDCQQDTEHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(20079..20513)
                     /gene="fur"
                     /locus_tag="ACFJCW_000694"
     CDS             complement(20079..20513)
                     /gene="fur"
                     /locus_tag="ACFJCW_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HFC4150899.1"
                     /translation="MEKFSNIAQLKDSGLKVTGPRLKILDLFEKHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            20740..21117
                     /locus_tag="ACFJCW_000695"
     CDS             20740..21117
                     /locus_tag="ACFJCW_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HFC4150900.1"
                     /translation="MNKTLILALSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPILRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDALQNAAEALRAKQNADKQ"
     gene            21127..21936
                     /gene="dapB"
                     /locus_tag="ACFJCW_000696"
     CDS             21127..21936
                     /gene="dapB"
                     /locus_tag="ACFJCW_000696"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HFC4150901.1"
                     /translation="MTPLKIAIAGANGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLAQSDVLIDFTRPEPTLKHLQKCVEKQVNIIIGTTG
                     FDDAGKAAIRAAAEKTGIVFAANFSVGVNLTFHILDTVARVLNEGYDIEIIEGHHRHK
                     VDAPSGTALRMGEVIAGALGRDLKQCAVYGREGHTGPRDPSTIGFATVRAGDIVGDHT
                     ALFATDGERVEITHKAGSRMTFAAGAVRAAVWVNGKTGLYDMQDVLGLNNR"
     gene            complement(22050..22319)
                     /locus_tag="ACFJCW_000697"
                     /pseudo
     CDS             complement(22050..22319)
                     /locus_tag="ACFJCW_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(22410..22568)
                     /locus_tag="ACFJCW_000698"
     CDS             complement(22410..22568)
                     /locus_tag="ACFJCW_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150902.1"
                     /translation="MDYFPEAARITKKGGEIVINGTSNNKYLRGIPNETELARMGLRL
                     KYNGSLTD"
     gene            complement(22576..23748)
                     /gene="lpxB"
                     /locus_tag="ACFJCW_000699"
     CDS             complement(22576..23748)
                     /gene="lpxB"
                     /locus_tag="ACFJCW_000699"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HFC4150903.1"
                     /translation="MWGQTNMVDKKSPLIAVSVGEASGDLLGAHLIRAIRKRCPQARL
                     TGIGGELMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRELVRDLLSLKPDVFVG
                     IDAPDFNLGVAEKLKRAGIPTLHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLY
                     LDAGGRAEFVGHPMAQLMPLEDDRETARKTLGADVGIPVFALLPGSRVSEIDYMAPVF
                     FQTALLLLERYPAARFLLPAATEATKRRLAEVLQRPEFAGLALTVTDRQSETVCRAAD
                     AVLVTSGTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPEL
                     LQSEAKPEKLAAALADWYEHPDKVAALQQDFGALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(23899..24891)
                     /locus_tag="ACFJCW_000700"
     CDS             complement(23899..24891)
                     /locus_tag="ACFJCW_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC4150904.1"
                     /translation="MKTHEISKGSVSLIGVAEHEAGQRLDNYLIKILKGVPKGYIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFEVVYEDDA
                     LLVVNKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSEDGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKAEPPPDLAQFAVMLENGTKM"
     gene            25360..>26920
                     /locus_tag="ACFJCW_000701"
     CDS             25360..>26920
                     /locus_tag="ACFJCW_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HFC4150905.1"
                     /translation="MPPVHEVIMKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQ
                     RKGNIYKGIITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFLGYEGGRARIQDVLKE
                     GMEVIVQVEKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAA
                     MAQLDIPNGMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESS
                     LLIRAIRDYFRPDIGEILVDNQEVYDQVAEFMSYVMPGNAGRLKLYEDHTPLFSRFQI
                     EHQIESAFSRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEE
                     VARQMRLRDLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLEL
                     SRQRLKPALGESSHAACPRCAGTGVIRGIESTALHVLRMVQEEAMKDNTGEVRAQVPV
                     DVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKR
                     VAEPEEDESAKP"
BASE COUNT         6459 a         7947 c         6875 g         5639 t
ORIGIN      
        1 ggttttgtga acaatgtttc cgaagtgata aaggcgcatc atatattcgt attgccgtct
       61 tatagggaag gcgttccccg gagcactcag gaggcaatgg ccgtcggcag ggcggtgatt
      121 acgacggatg tccccggatg cagggaaacg gtcgccgaca aggtcaacgg cttcctgatc
      181 gaaccttgga atccccgcat cttggccgaa aaaatgattt attttatcga aaacagggct
      241 gccgtccgcc tgatggggaa tgcaagttat gcgattgcca aagataaatt cgatgccgaa
      301 aaagtcgatt tgaaatttct cgatattttg aaggcgtaaa caaggtggtc ggcttttgag
      361 tttcggtgat ttctgacaaa ctcccgtcat tcccgcgaaa gcgggaatcc aggttcgttg
      421 agcttcagat gtgtagggcg ggctgtaggg tgggcttcag cccaccgaaa ccaatcccgc
      481 caccaacctc accggctcaa accggcacag caacttatat cccgtcattc tcgcgcaggc
      541 gggaatccag ccccgccggt acagaaactt atcgaaaaaa agtttcttca gattttacgt
      601 tctagattcc cactttcgcg ggaatgacgg gatgcaggtt tccgcgcgga cggattcggc
      661 attcccgctt tcgcagaaat gtcggctttt ggtttgttgt ctttataaga ttattcggta
      721 attattctgc ggttttgcgt ttgtgtgctg ccggaatctc aagggattct ctgtatttgg
      781 caacggtgcg gcgggaaacc tctataccgc ggaaagccag caggttggcg agtgcctcgt
      841 cagaatagga cttgggcgtg gacgaggcaa aaccggcggc gggaaagggg ttgagcgaag
      901 caatgaggcc gagtgcggct tcgagtgtgc cgctgtcggt ttggggcagg cgttttttat
      961 tcgcgccggg gtttggctgc ggttgccgtc aatgctgtcg agggcgtttc ggacgatatg
     1021 cagggcggcg ggtttggcag cacattcgcc cgatctttct atctgcaata tcaacgattc
     1081 ggtcacatcg gcggcggcca tgcctgccgg atcgaatttt ttcaatgcgg tcagggcttg
     1141 tttcagcatt gcttcatcca acatccactc caagggcgta tggtccagga tgtcttcgat
     1201 gctgtcggtc aggtagccct gctcgtcaag gaaatcgata aggatgtgga cgcaggcggc
     1261 ttcttggtcg gaaagggggt gttcgcacgc ttgcgcgtgc aggtattgct tgaaatcttc
     1321 ttcgccggcg atgttggaca gcatatcttc gccttcgtct ccgccgattt gacgcgcggg
     1381 cgcggtgtaa tggctgaatt cggcatcgga aaattcatcc gtttctttgc gttcgagcag
     1441 ggggttgtcc gacggccagt tttcgacctc gcgttcaagt tcgatacccg gcatctgcaa
     1501 tacgcgcaaa gattgttgca gccgctggtc gagctgctgg gtctgtttga gctttattcc
     1561 gattaaggta atgataatgc ggtgaaaatt gttattttca gcctgtcggc gcaaaaaaat
     1621 gccgcaaagc gtcattgcat tataaatggt tttaatgagc gggttcggat tccgtccgat
     1681 aacaaaaaac aaacgaaaat ggaaacttga ttgcttataa caatattaaa tcaatttcat
     1741 agttttaata acgaaaatct tggcgtataa tcgcattcat agtttttgca aaaggaaaat
     1801 aaaatgtcga ttcaagaaat ttattacaat caagaaaccg gttacgaata cgctttccgc
     1861 caaatcgtac tgtaagccgt ttgcccccca tttgaccaac ctgagaaaag gaacaagagc
     1921 gatgactacc tccaaatgcc ccgtaaccca tctgaccatg aacaacggcg cgcccgttgc
     1981 cgacaatcaa aacagcctga ccgccggccc gcgcggcccc ctgctgacgc aagatttgtg
     2041 gctgaatgaa aaactcgccg acttcgtgcg cgaagtcatc cccgaacgcc gtatgcacgc
     2101 caaaggttcg ggcgcgttcg gtacgtttac cgtaacacac gacatcacca aatacacccg
     2161 cgccaaaatt ttcagcgaag tcggcaaaaa aaccgagatg ttcgcccgtt tcaccaccgt
     2221 ggcaggcgag cgcggcgcag ccgatgcgga acgcgacatc cgcggttttg cgttgaaatt
     2281 ctataccgaa gaaggcaact gggatgtggt cggcaacaac acgcccgtgt tcttcctgcg
     2341 cgacccgcgc aaattccccg acctgaacaa agccgtcaaa cgcgatccgc gcaccaatat
     2401 gcgttccgcc acaaacaact gggacttctg gacgctgctg cccgaagccc tgcaccaagt
     2461 taccatcgtg atgagcgacc gcggtattcc cgccagctac cgccatatgc acggcttcgg
     2521 ttcgcatacc tacagcttct ggaacgaagc gggcgaacgt ttttgggtga aattccattt
     2581 ccgcagccag caagggatta aaaacctgac caacgaagaa gctgcaaaaa tcatcgccga
     2641 cgaccgcgaa agccatcagc gcgacctgta cgaagccatc gagcgcggcg agttcccgaa
     2701 atggacgatg tacatccaag tcatgcctga agccgatgcc gaaaaagtgc cttatcatcc
     2761 gtttgacttg accaaagttt ggccgaaaaa agactatccg ctgattgaag tgggcgaatt
     2821 cgagttgaac cgcaatcccg aaaacttctt cgccgatgtg gaacaatccg ccttcgcacc
     2881 gagcaacctc gttcccggta tcggcgcgag cccggataaa atgttgcaag cccgtttgtt
     2941 caattacgcc gacgcgcaac gttaccgctt gggtgtgaac ttccgccaaa tccccgtcaa
     3001 tcgtccgcgt tgccctgttc acagcaacca gcgcgacgga caaggccgcg ccgacggcaa
     3061 ctacggcagc ctgccgcact acgaacccaa cagcttcggc caatggcagc aacaacccga
     3121 cttcgccgaa ccgcctttga aaatcaacgg cgacgcggca cactgggact accgccaaga
     3181 cgatgacgac tacttcagcc aaccgcgcgc cttgttcaac ctgatgaacg acgcgcagaa
     3241 acaggctttg tttgacaaca ccgccgcagc catgggcgat gcgcccgact tcatcaaata
     3301 ccgccatatc cgcaactgct accgttgcga cccggcatac ggtgaaggcg tagccaaagc
     3361 cctcggactg accgtcgaag acgcacaagc cgcccgcgcg accgatcccg cactgggtca
     3421 ggccggtttg ctgtaagggg gcattatgtg gatggaaatt gaagaaatcc tgtcccgcgc
     3481 cgtccgatac cggaaataac cgggcataaa aatgccgtct gaaacgtcgt ttgaccgttt
     3541 cagacggcat ttccacacct cgccccgccg tttcagtggg cgttttttat tatagtggat
     3601 taaatttaaa ccggtacggc gttgcctcgc cttgtcctga tttttgttaa tccactataa
     3661 acgcaaaata tcccgtcatt cccgcaccat ccccaccggt tcaaaccggc acgaaaactt
     3721 ttccgcgtca ttcccgcgaa agtgggaatc cggaacgtaa aatctaaaga aaccgttttc
     3781 ccgataagtt tccgtgccga cggggctgga ttcccacttt cgtgggaatg acgggatttc
     3841 tgtttttgat tttttgtttt tgcgggaata acgggatgcg ggttttcgtg cggcgttttt
     3901 cgcgctttgc tgttttgtta taatccgccc tttttaagga tgggtgcggt atgagtcttt
     3961 acgctttgct cttggttgcg ctgggaatgt cgatggatgc gtttgccgtc gcgctggcaa
     4021 agggtgcggc ggtcaggatg cccccgcgca aaattgcagc aacggctttg gtgttcggta
     4081 cggttgaagc gttcatgccg ctggcgggct gggtaggcgg tttttatgcc aagccgttta
     4141 tcagcgaatg agaccattgg gtggcttttg tcctgttggg cggactgggt ctgaaaatga
     4201 tgcgcgaagg gttgtccggc gaggcggaag atgtgcgcga aagcaaacag gaaagcctat
     4261 ggatgacggt tttgactgct tttggaacca gtattgattc catgatcgtc ggggtgggct
     4321 tggcgtttat ggaggtaaac atcgcctttg ccgccgccgt aatcggtatg gcggctacgg
     4381 taatggttac catcgggctg acggcgggaa aggcttttgg cgtattgttc ggcaggcgtg
     4441 cggaatttgc cggaggtttg gtgttgattg ccatcggtac atggacgctc ttatcgcatt
     4501 tgggtttgat tcaatgatgt cggaaaataa aatgccgtct gaagctttac cggtttcaga
     4561 cggcattttg ttaaacttga ttctctatcg gtattattgt gtaaagctat tgaaaataaa
     4621 atattgattt tccgcaaaga tggctaaagg tgcgataggt acactgaaga aataatcggc
     4681 agaacaggtt tgcctgccgg tttgaacaat gattttaacc tcccataagg aatacacgat
     4741 gtctttcaaa ctccgttacc tcgcatcagt attggcattg tcttcactgt tggcggcatg
     4801 cggcggtcag gaaaagtctg cggcaggcga tgcttctcct gcttccgaga ccgaagcggc
     4861 ttcccaagta caggcctcgg aagccgttcc ttccgcttca tcggcctcgc ccgaagacca
     4921 agaccttttg aaacgcgcgc aaggtgtatt ccaacctttg ccgactgtcg aagaaatgca
     4981 gaaaatccgt ccgtttaccg aagaacaggt caaactcgga caccaactct ggtatgaacc
     5041 acgcctttcc aaaggcaata ccgtaagctg caactcttgc cacaaccttg cttccgccgg
     5101 tgtggacaat atgccgacca gtcaggggca caaagggcag ttcggcggac gcaactcgcc
     5161 taccgcattg aatgctgcgc tgctgggcag ccagttttgg gacggacgtg ccgccgatgt
     5221 tgaagaacag gctggcgggc ctttggtgaa tccggtggaa atggcgaatg attcgcaaga
     5281 ggcggctgca gccaaaatcg ccaaagttcc cgaatatcaa gaaatgttta aaaaagcttt
     5341 tcctgaagac ggcgcggttt cgtttaaaaa catcactacc gcattgggtg cgtttgagcg
     5401 taccctgctg acgccgacca aatgggacga atacctcaaa ggcaacgtca acgccctgag
     5461 cgaacaggaa cgaaaaggcg tgcgcgcgtt catggacaac ggctgtattg cctgccacaa
     5521 cggtgtcaac cttggaggca cgaccttcca gaaattcggt ctggtccaag ggccgtattg
     5581 gaaattcatt gaagatccga aacgcgacaa aggccgtgct gacgtaacca aaaaaaccga
     5641 agacgaattt ttcttccgtg ttccggggtt gcgtaacgtg gctaaaactt atccgtattt
     5701 ccacaacggc agcgtgtggg agctggataa ggcagttacc atcatgggta aggcgcaatt
     5761 gggtaaagac attccgaaag aagatgtgga taacatcgtc gtattcctga atgcactttc
     5821 cggcaatgtt tccgaatcag cgcgcacgat gccggaactg cccctgaccg caccgatgga
     5881 atctaagccg gacaacaaat aatccggccg gtacgcaaaa atgccgtctg aaacgggaat
     5941 ctgtttcaga cggcatttta tatttcgtcg cgtcagatac gcagggtatg ccgtagggtg
     6001 tgcttcagcc agccgtttcc accaattcaa ccaaccatgt ccgggtctta tgcgtttttc
     6061 acgaatgcgc ggcgtaggcg gagggattgg tgggctgaag cctaattcaa tggctgcgtt
     6121 gtgtaagcca tgatgcgttt ggataattaa tcaatattct tgcgctacca ttaccatcgg
     6181 ctttgggggt ttgtacttcg gcattatgat aatcaatagc ctgtttggat tgtattcccg
     6241 aatccgacag ttttagatta taaaaaggcc gtctgaaaaa ttttcagacg gccttttata
     6301 gtaaatttca aataaaaata tctttgtcgt cattcccgcg caggcgggaa tccagacttg
     6361 tcggcacaga aacttatcgg gtaaaacggt ttcttcaatt ttatgttccg gattcccgcc
     6421 tgcgcgggga taacgattca ggtatttcta catcgaatcc gctttttata tcaacctgac
     6481 tatcaagccg cgttgtcgaa gccgctgtgg cgcagcagtg cgtctatgct cggttcgcgt
     6541 ccgcggaagg ctttgaagga ttccgccgcg ctgcgggagc cgccgacggc gaggatttct
     6601 tgccagaagc gtttgcctgt ggcggcgacg tcgtcgcttt cttcaaaggc ggcgtaggca
     6661 tcggcgctga ggacttcggc ccatgcgtag ctgtaatagc ctgcggaata gccgccggcg
     6721 aagatgtggc cgaagctgtt ggcgaagcgg ttgtattcgg gcggttggat gacggcgact
     6781 tctttgcgca cgctgtctaa aacctgctgc cagtttttca gacggcattc gtcgctttca
     6841 ctgtaaatca tcatatcgaa gagggcgaat tccatttggc ggacgaggaa catgccgcgt
     6901 tggaagtttt tggcggcgag cattttgtcg aagagttctt tcggcagggg ctcgccggtt
     6961 tcttcgtggg cggacatttg tgccaataca ttgtattccc aaacgaagtt ttccataaac
     7021 tggctgggca gttcgaccgc gtcccattct acgccgttga tgccggacac gcccagttcg
     7081 tccacttggg taagcaggtg gtgcagtccg tggccggttt cgtggaagag ggtgaggatt
     7141 tcgtcgtggc ttaaacgcgc ttctttgccg ccgacgggcg gggcgaagtt gcagacgagg
     7201 taggcggtgg gcagttgcag cgtgccgtcg gcaaagcggc ggcggccttt gtagtcgttc
     7261 atccacgcgc cgccgcgttt gccttcgcgt gcgtacaaat ccatataaac gccgccgatg
     7321 gttttgccgt tttgctccag ctcgaagtag cgcacgtctt tgtgccagac ggggacggtt
     7381 ttttcggcaa atccgatgcc gtagagtttt ttgatttggg cgaacagtcc gtttaatact
     7441 ttgccgacgg ggaagtattt tttgacttcg gtttcgctga atgcgtattt ggcttcgcgc
     7501 agtttttcgc cggcgtagct caagtcccac ggctgcgggt cggcgagacc gaggtgttcg
     7561 cgggcgaagg ctttgacttc ggcgaggtct ttttcggcgt agggtttggc gcggcgggcg
     7621 aggtcgtgca ggaagtttaa aacctgttcg ggcgtgtccg ccattttggt tgccagcgac
     7681 aattcggcgt aatttttaaa gccgagcagt ttggcggttt tcaatgcgtt ttcgagcgtg
     7741 cggtcgatgt tggcggtgtt gtcgaatttg ccgtcgtttg aaagttcgct ggcacgggta
     7801 acgtaggcgc ggtagatttg ttcgcgcagt tcgcggttgc cggcgtattg gatgacggca
     7861 aggtagtgcg gaatctgcaa gccgattttg taacctgttt tgccttcgct ttgcgcggcg
     7921 gcggcgaaca tggcgagcgc gtcttcggga atgccggcaa gcggtgcggc atcgtcaaag
     7981 taaatgccga acgcgtcggt cgcgtctagg acgttttggg agaatttggc ggaaagttgc
     8041 gcgccttcgg tttgcagttt tgccagttct gcctgctgtt cgggcggcag ttccgcgccg
     8101 ctcaatacga aatcgcgcag gtcgtgatcg agcttggttt tttgtgcggg ggaaagcgtt
     8161 gcaaattcgg gggaattttt gatggttttg aagcggttgt acagttcgat gtcttgtccg
     8221 atttcggtga agaagacggt gatttcaggc atcagttcgt tatagacggc gcgcagttcg
     8281 ggcgtgtcga cgacggagtt gagatgggac acgacgcccc aaatcctgcc gacgcgttcg
     8341 gtgatgccgg tcagacgctc gacggtgttc gcccagccgg tgtgcgtttg cgctttgacg
     8401 gcggcgattt gtccgcgcgc ttcggcgatg gcggtttgga cggcgggttt gatgtcttcg
     8461 gttttgattt gattaaaacg gggttcttcg cccaagtgga gcagtgcgtt gtcaatcata
     8521 agatgggttt cctttgcgtg ttgtgcttca gacggcatat cggcaatatg ccgtctgaag
     8581 ccagaaatgg ggccggccgg ggaaagttaa agtgtttcgg agccggcggg atgatttaac
     8641 aggcggtatt gtacgcgcaa aaattcgtcc ataaccgcct gttggatttc cagccgcttt
     8701 gaaacggggg aggcgaagcg gacgatgatg cggtatgcct tgtcgtcgta cggtacgcgg
     8761 gtaacgcgcg gcctggcggc gggcgtgata aacagttttt ccgcctgcac gttttccaaa
     8821 taccgctgaa tggcggggat gtagggcgcg cacaagggct cgagtacggc tttcagacgg
     8881 catacggctt catccgaatc caaatggatg ggaacgggga tttcgaccgt atggatgaca
     8941 tagtcgccca aaatattgtc gcggcgcacg gggtggctca acaacaggct gttggggaaa
     9001 gaaacggtgg ttcccgcaag ctgtccgacc aaggggttcg gaccgacctg catcatcagc
     9061 gtgttcaaca gattgatgtc gaccacgcgc ccgcgcaggc cgttgatttc gatatagtcg
     9121 ccgaccgagt attgctgggt ggcagacctt aaaatactgc ccgacagaca cataatcagt
     9181 tcttttgtcg ccacgacgac cgccgccgcc accgcaaaca tcgacaacgc cagcgtttga
     9241 atttgcgccg accagataaa tgccagcgaa aacagcacca aaagcagcgt tatattgcgg
     9301 ctggcaacca aaaaccgccg cttgctttcg atgccgaaat ccggatgccg tctgaagcgg
     9361 atattcaaca gaagggcgcg cgccagcagc aaagccgcga ccgccgccac ggattcggcc
     9421 gcctccgcgc gtatcgggac ggcatcgggc caagtgttca acatattcca tatttccatt
     9481 tccgcgcccc tgtccgaaaa gtatagggtg tagattttag tggcaaaaaa acgcttttgc
     9541 cactttgccg gcaaattccg cgcccgtacc ggccgcaaat gcgccgcacg ccctttcaga
     9601 cggcatccgg atgcggataa cgctgaatca ggcggcgaaa tcggctataa tacacaatta
     9661 tatgcgccgt cccgcccgct ttttccacaa ggtgcggact gttttggcgg catcgcaaaa
     9721 tcttttcaaa atccggcaaa aaatatgact gaacaaaaac acgaagaata cggcgccgac
     9781 agcatccagg tgctcgaagg cttggaagcg gtacgcaaac gccccggcat gtacatcggc
     9841 gacacgcagg acggcagcgg gctgcaccat atggtgtttg aagtattgga caacgccatc
     9901 gacgaagcac tcgccggaca ttgcgacaaa atcacggtaa cgatacacgc cgaccattcc
     9961 gtcagcgtcg ccgacaacgg gcgcggtatg cccaccggca tccacccgaa agaagggcgt
    10021 tccgccgccg aagtcatcat gaccgtcttg cacgcgggcg gcaaattcga caacaacagc
    10081 tacaaaatct ccggcggcct gcacggcgtg ggcgtatccg tcgtcaacgc gctgtccgac
    10141 tgggtaacgc tgaccatcta ccgcgacggc aaagaacact tcgtccgctt cgtacgcggc
    10201 gaaaccgaag agccgctgaa aattgtcggc gattccgaca aaaaaggcac gaccgtgcgc
    10261 ttcctcgccg gcacggaaac cttcggcaat atcgaataca gcttcgacat cctcgccaaa
    10321 cgtattcgcg aactttcgtt cctaaacaac ggcgtggaca tcgaattgac cgacgagcgc
    10381 gacggcaagc acgaaagctt cgccctttcc ggcggcgtgg cgggcttcgt gcaatacatg
    10441 aaccgcaaaa aaacgccctt gcacgaaaaa atcttctatg cgttcggcga gaaagacggc
    10501 atgagcgtcg aatgcgcaat gcaatggaac gacagctatc aggaaagcgt gcagtgcttc
    10561 accaacaaca tccctcagcg cgacggcggt acgcacctga ccgcgctgcg ccaagtgatg
    10621 acgcgcacca tcaacagcta catcgaagct aacgaagtcg ccaaaaaagc caaagtggaa
    10681 accgccggcg acgatatgcg cgaaggtttg acctgcgtgt tgtccgtcaa actgcccgac
    10741 cccaaattct catcccaaac caaagacaaa ctggtttccg gcgaaatcgg ccccgttgtc
    10801 aacgaagtca tcaaccaagc actaaccgac ttcctcgaag aaaatccgaa cgaagccaaa
    10861 atcatcaccg gcaaaatcgt cgatgccgcc cgcgcacgcg aagccgcccg caaagcccgc
    10921 gaaatcaccc gccgcaaagg cgtgatggac ggcttgggac tgcccggcaa actcgccgac
    10981 tgccaagaaa aagaccctgc cctgtctgaa ctctacctcg tcgagggcga ctccgcaggc
    11041 ggttccgcca tgcagggccg cgaccgcaaa ttccaagcga ttttgccgct caaaggtaaa
    11101 attttgaacg tcgaaaaagc acgttttgaa aaaatgctcg ccagccaaga ggtcgccacc
    11161 ctgattaccg cgctgggtgc aggcatcggc aaagaagagt tcaaccctga aaaactacgc
    11221 taccaccgca tcatcatcat gaccgatgcc gacgtggacg gtgcgcacat ccgcaccctg
    11281 ctcctgacct tcttctaccg ccaaatgccc gaactggtcg agcgcggcta catttacatc
    11341 gcccagccgc cgctctacaa agccaaatac ggcaagcagg agcgttacct caaagacgaa
    11401 ctggaaaaag accaatggct gctcggcctt gccttggaaa aagccaaaat cgtttcagac
    11461 ggccgcacca tcgaaggcgc agaacttgcc gacaccgcca aacaattctt gttggcgaaa
    11521 accgtcatcg aacaggaaag ccgcttcgtg gacgaactcg tcctgcgtgc catgctgcac
    11581 gcgtcgccca ttgatttgac gtcgtctgaa aacgccgata aagccgttgc cgaactttcc
    11641 ggtttgcttg acgaaaaaga agccgccctc gaacgcatcg aaggtcatga aggacaccag
    11701 ttcatcaaaa tcacgcgcaa gctgcacggc aacgtcatgg tcagctacat cgaacccaag
    11761 ttcctcaaca gcaaagccta ccaaaccctc acccaaaccg ccgccgcgct caaaggcttg
    11821 gtcggcgagg gcgccaagct ctacaaaggc gagaacgagt acgacgcgga cagctttgaa
    11881 accgctttgg acatcttgat gagcgttgcc caaaaaggta tgtccatcca acgatacaaa
    11941 ggtttgggcg agatgaaccc cgagcagctt tgggaaacca cgatggatcc cgccgtgcgc
    12001 cgcctgttga aagtgcgcat cgaagatgcc attgccgccg acgaagtgtt cgttaccctg
    12061 atgggcgacg aggtcgaacc gcgccgcgcc tttatcgaaa acaatgcgct gattgcgcaa
    12121 aatatcgacg cataagtgcc gttttaaaaa aggagacggg cagcttgccg cgtctccttt
    12181 tggtttgtca aacggaagcc atgccgtctg aaaccgcctt tcggagcaaa accatgatca
    12241 gcatttttga tattttcaaa atcggtatcg gcccttccag ttcgcatacg gtcggcccga
    12301 tgaaggccgc cgccgccttt gccgcaggct tggacgcgca aaccgcccgc atcgccatcg
    12361 acatttacgg ctcgcttgcc ctgaccggat acggacacgg cacatttgac gcgctgatgc
    12421 tcggtttgga aggcagcctg ccgcacgaca tcccgcttgc cggcattccc gaacgcctcg
    12481 gacgcatccg cacgcagcac atcctccggc tcaacgggca agaaatccgc ttcatccccg
    12541 accgcgacct gaacatacgc ggcaatcaag tgctgcccaa acaccccaac ggcctgcgat
    12601 ttaccgccta tgcttcagac ggcacggtat tgaaggaaca ggtttattat tcggtcggcg
    12661 gcggctttgt cgttaccgaa gaagacttcg agtggcagtc ggaaacggaa aaagccgttc
    12721 cttatcctta caacagttgt gccgggctgc ttgcccgatg ccgtctgaac cggctcggca
    12781 tctccgaagt cgtgttggca aacgaagccg cgcttgccgg atgcggcgaa gccgaaatcc
    12841 gccgccgcgt cgctgccgtt gccgaggtta tggaaggctg catcaaacgc ggcttgggtg
    12901 cggacggcga actgcccggc ggattgaacg tccgccgccg cgccccgcag cttgccgcca
    12961 aactcaaagt cctgcgcgaa accgaaatcg tcaacaccca gctctggccg atggtgtacg
    13021 ccatggcggt caacgaagaa aacgccgccg gcggacgcgt cgttaccgcc ccgaccaacg
    13081 gcgcggcagg catcattccc gccgtattgc attatttccg caagttcaac ccccacgcca
    13141 cacaggaacg tgtcgaaaac ttcctgctca ccgcaggcgc aatcggcatc ctctacaaaa
    13201 ccaacgcctc catttccggc gcggatgtcg gttgtcaggg cgaagtcggc gtagcgtgtt
    13261 caatggcggc gggtgcatac gccgaagtca tcggcggcac gcccaaacaa gtggaaaacg
    13321 ccgccgaaat ggcaatggaa caccatttgg gcttaacttg cgaccccgtc ggcgggttgg
    13381 tgcaaatccc ctgcatcgaa cgcaacggca tcgccgccga aaaagccctc aaactcggca
    13441 cgctcgcgct cttggaagac ggcacggaca aaaaagtctc gctcgacgaa gtcatccgaa
    13501 ccatgctgca aaccggccgg gacatgaagg cgacctacaa agaaacctcg cttgccggac
    13561 tcgccgccac gctccggaaa aaagccgtcc ccgtatccgt gcgcgtggtc gagtgctgag
    13621 gatggacaga aacgaaaatg ccgtctgaaa acagtttttc agacggcatt tcatttattt
    13681 tttgcgggtt taccgcttca acgccaacgt caacacgccc gccgtaacca gccccaagcc
    13741 tatccattcc tgcgtgttcg ggcgttcgtc caagaaaacc accgccatca ggaatgcaaa
    13801 ccggcgttgt ttgcagcatc cggcaagaat ttttatagtg gattaacaaa aatcaggaca
    13861 aggcgacgaa gccgcaggca gtacaaatag tacggaaccg attcacttgg tgcttcagca
    13921 ccttagggaa tcgttctctt tgagctaagg cgaggcaacg ccgtaccggt ttttgttaat
    13981 ccactataaa aggtcttttc taaaatatgc agatattcga atgtcgaatt tgccttatga
    14041 ttacggtttt ctgtcttatc cgccttaaaa cgccggtatt ccgtttgaac caaattatat
    14101 ttgccgaaac actcaaaaat ctcccttacc tgcccgacag acatcaagac ttcgttgttg
    14161 taactgagaa aaatatattg aaagtccgca tccctaatca aagcctcaaa taccggaacc
    14221 acatccgatt ttgatcaagt ccgcgctaaa acacatcgta cagcgcaaaa ccggatggga
    14281 atggcaaaat ccggaaacaa acatttttca aagcgtacaa acaaaaaata ccaaccggag
    14341 gttggtattt cttaactttt ggcgcggcgg acggggctcg aacccgcgac caccggcgtg
    14401 acaggccggt actctaacca actgagctac caccgcgcat ccattgcttg caacaatgaa
    14461 aggaaacttg gtgggtgatg acggagtcga accgccgaca ttctgcttgt aaggcagacg
    14521 ctctaccaac tgagctaatc acccgtgtat aaaaaatacc gacagagtca gtattttgaa
    14581 acttggcgcg gcggacgggg ctcgaacccg cgaccaccgg cgtgacaggc cggtactcta
    14641 accaactgag ctaccaccgc gcatccattg tttgcaacaa tgaaaggaaa cttggtgggt
    14701 gatgacggag tcgaaccgcc gacattctgc ttgtaaggca gacgctctac caactgagct
    14761 aatcaccctt gcgatttgcg aaaacgctat tagaccaaat aaccgggaat ggcgcaagcc
    14821 ttatttcggc atttcattca tatcccctgc aagctccagt tttcaaaaga gataatttct
    14881 tcttttttgc ctgcgaccac caacacgtca ccgccttcca atgtaaacga ggcatccggg
    14941 ttttcaatcc ggccggtgcg gcggcggacg aacaagagtt tgatgccgta agccgccatc
    15001 ggaagcgtgc cgactgtttt gccgacggcg tatgcttctg cagccaaagg aaaggcgtgg
    15061 cggacggttt cgccattttc gccgaatcct gcctcatcat cactaccgac aaacagtccc
    15121 tccaacgcgg cataacggct gtggcggata tttgccatcg tctgatagac gtgccggtac
    15181 gacgcgccgt tgcccaacat cgcatagcct gccagcacga gtccggtttc tttggtgtcc
    15241 gacacggctt cttccgcacc catatcggta aacgttttca cataatcgtc attggtggcg
    15301 cgcgcatata cgggcatatt gggatgcatg gacagcacat tgtctaaaac gtgttgcgtt
    15361 tcgtgcatat tgttgagcgt aaccaccacc attttcgccc gtcccagacc ggcggcttcc
    15421 aatacttccc tgcgtttcgc atcgccgaac gacaccggct cgcctgcact tctggctacc
    15481 tgcacgcgtg cgatgtccaa gtcgagcgcg aaatacggaa tatcctcttg ggcgaggacg
    15541 cgtccgaccg tctgcccgcc cctgccgaag ccgacaatca gcacatgatc agacttgctc
    15601 atcgcttcca ccaacatgct gtgcagatcg agcgacttca tgtcccagct tgacttgacc
    15661 aagcgcccga ccagcgcatc gctgccgccc aagaggaagg gcgcgataat catcgacagc
    15721 agaaccgccg ccgtcgccgc ctgttccaat tctggcgaaa ccatatcaag ctgcccggca
    15781 atggccagca tcacgaagcc gaactcgccg ccttgcgcga gatacaaagc cgttttgagg
    15841 ctgtcgccga ccgaatgctt cattttgaat gcaatggcaa acacaaccaa tgccttcaac
    15901 accagcagca ttgccaacag catcaatacc tgccgccagc cgccgatcaa tgcctgaatg
    15961 tccagcttca tgccgaccgt gataaagaag aagccgagca aaatatcgcg gaacgggcga
    16021 atgtcgtctt cgacttggaa acggtattcc gtttccgaaa gcaacatgcc ggcaacgaat
    16081 gcgcccaacg ccatagacaa accttccagc tcagtcagat aagccacacc caaggttacc
    16141 agcagcacat tgatcataaa gagttcggac gatttgcgtt ttgccaccat cctgaaccat
    16201 cgcgacataa ttttgctgcc gacgaaaaac agcagcccca gcgtcagcag catttttgca
    16261 aacgccaaac ccaaggccgc ccaaatattt ccgtcccctc cgccagccag cgcgggaatc
    16321 agaatcatca gcggcacgac ggcgatgtcc tgcatcagca gcacgcccat cgccatctga
    16381 ccgtgcggct gccccaactc cgtcttttcc gacaaaatcc ggctcacaat cgccgtggac
    16441 gacatcgcca acgcgcccga tacggcaaac gcccaattga acggcacgcc cgtcagcatc
    16501 agtatgccca ttaccgacag catcgtaacg ccgacctgca aaccgcccag accgaacacc
    16561 agccgcctca tcgccctcag cttgggcaat gaaaactcca aaccgatgct gaacatcagg
    16621 aacacaatcc cgatttcgcc caaataatcc gtcgcatggc ttttcggaat caggctgagc
    16681 ataccgggcc ccgccaaaaa gcccaccagc aggtagccca gcatggaggg aatgttgaac
    16741 ttgcggcaca ggatcaccgt aatgaccgac accagcagaa caaccacaat aggggcaagc
    16801 gaaaattcgt tcatggaccg tccgaacagg aaaatacaga aaaatgccgt ctgaaacggc
    16861 atacgccgcc gtattataac aaaacaccgc gcaccatccg aaacgggcgc ggcatacaat
    16921 tctgataaaa tacgcccttt tgacccgcac caccgcacaa tgaccgccac cgccgccgat
    16981 ttagaccgac tcctccccca aacccaatgc cgcgaatgcg gctatgaagg ctgcctgccc
    17041 tacgcccgcg cgatgctgcg gggcgaggcg cacaacctct gcgccccggg cggcgcaacc
    17101 gtcgtccgcg accttgccgc cctgctcggc aaaccccttg tcgcacctgc caaaacccaa
    17161 gccaaagcac tcgcccggat agacgaaacc gcctgtatcg gctgcaccgc ctgcatccgc
    17221 gcctgccctg ccgatgccat tatgggcgcg ggcaaactta tgcacaccgt catcaccgac
    17281 gaatgcaccg gctgcggact ctgcgtcgcc ccctgccccg tggactgcat ccatatgaag
    17341 cccgttgccg acaccgtcct gccgcgcgca cgccgtttca gcctgtccga cgacagccgt
    17401 tttgccgccg ccgaacacgc gcgtgcgcgc tacctcaaac gcaacgaacg caaacagcgc
    17461 gaagccgacg aacgcaaggc catgcttgcc gaacgcgaag ccgccgtccg caacgcgcgt
    17521 ccgcaaacgc ccgacacacc gaaaaaaccg gcgttcaacc ccgccgacct catcgccaaa
    17581 gccatggcaa aagcgcaaac ccaacaggat cgcctcgccg ccgccgacaa ccgccaaggc
    17641 tatcaggcaa aacagatagc cgaagcccgc gaacgcgccg agttgcgccg cgcccaacgc
    17701 gatatgaaat acggcagcga cagcgaaaaa gccgccgccc tcgaatacct caaacaatac
    17761 aaagccaaac aggaagccgc acagaatacc gcctcctgac ccttacccga catgccgtct
    17821 gaagccgctt cagacggcat tttatcaagc tctccgtccg ccgtacccgt gccgtccgta
    17881 tcttaccgcc cacccttccg gccgtgccgt tttcaataaa atattaatta cacgccacta
    17941 caaatttgct ataatccgcc ccgaaaatct acccaaccct caacaaagga acaaaccatg
    18001 ggcatcaaag tcgccatcaa cggctacgga cgcatcggcc gccaggtttt gcgcgccatc
    18061 tacgactatc agattcaaga ccaactccaa atcgtcgccg tcaacgccag cggcagcctt
    18121 gaaaccaacg cccatctgac caaattcgac accatacacg gacgctttga agccgacgta
    18181 tcccacgacg gcggcaacct catcgtcaac ggcgacaaaa tccccttctt ctcgacccgc
    18241 aaccctgccg aactgccgtg gaaagaactc ggtgtcgatt tggtcatgga atgcaccggc
    18301 tcgttcacca gcaaagaaaa agccaaaatc cacctcgaaa gcggcgcgaa aaaagtcctc
    18361 atttccgcac cgggcggcga cgatgtcgat gcaaccgtcg tgtacggcgt gaacgacagc
    18421 gtcctgaccg ccgacatgac cgtcgtttcc aacgcttcct gcaccaccaa ctgcctctcg
    18481 ccggttgcca aagtgttgag cgaaagcgtc ggcatcgtca aaggcgcaat gaccaccatc
    18541 cacgcactga ccaacgacca aaccgttacc gacgtgcgcc acaaagacct gcgccgcgcc
    18601 cgcagcggcg tggaaaacat gattccgacc aaaaccggcg cggcaaaagc cgtcggtttg
    18661 gtcttgcccg aattgaaagg cagactcgac gggcttgcca tccgcgtgcc gaccgtcaac
    18721 gtatccttgg tagatttgag cctccaagcc gcgcgcgaca ccacagtcga agaaatcaac
    18781 gcactgatga aagccgcctc ggaagcaggc gcgctcaaag gcgttttggg ctacaacacc
    18841 ctgccattgg tttccatgga cttcaaccac accaccgaag ccagccactt cgacgcaacg
    18901 ctgaccaaag tcgtcgacgg caacatggtc aaagtgttcg cgtggtacga caacgaatgg
    18961 ggcttcagct gccaaatgct gaacaccgca cgccgtatgt tcggacttga agtgcgcccg
    19021 ctcaaataag caacaaaccg tcaaacaaaa tgccgtctga aacccgatgt tttcaagttt
    19081 cagacggcac ttttcatttt tgaccgcgat tttacccggc tgtcgtcatt tccaatttta
    19141 tagtggatta aatttaaacc ggtacggcgt tgcctcgcct tgccgtacta tttgtactgt
    19201 ctgcggcttc gccgccttgt cctgattttt gttaatccac tataatccac tatatttgaa
    19261 cctgaccgaa gcataagccg ccatcaaagc cccttgcacg ccacttcgcg ccgcccgatt
    19321 tcctctttca acggcacggc gttcaacatc cgcagacgtt cggcaaaatc cgcaaacggc
    19381 agcagctccg aaccgaaacg gcgcatatgt tccgtgtcct gctggcagtc tatcagttcc
    19441 acgcccaaat ccgccaaaaa cggcacggcg caggcaaacg cgattttcga cgcatccggt
    19501 tgcaacgcaa acatcgattc gccataaaac accctgccga tctgaacgcc gtaaaagccg
    19561 cccgccaacc tcgttttacc gttttcatcg ggataatggc actcgaaaga atgcgcgtgt
    19621 cccatttcgt gcagcttcaa atatgccgtc tgaaactcgg gcgcaatcca agtcccatcc
    19681 tgattcgggc gcgccgctgc cgcacaatgc gcgacaactt ccgcaaaaca gccgttgacc
    19741 gcaacccgat agctgccgtt acgcagcgtt ttcgccagcg agcgcggaac gtgcagacgt
    19801 tcgggaacaa ttaccgcacg cggcccgacc gcataccaaa aaaaccaacc gtcccgcgaa
    19861 aaccaaggaa acacgccgtt ccgatacgcc tcgagcagcc gccccgcgtc caaatccctg
    19921 ctcacgccga ccagcccgtc gcaccgggcc aaagcatagg caggatcggg aaaggcataa
    19981 ttgtcagggg caagcagcgg aatacgcatg gcagttctcc aaaaacacag acggcatcca
    20041 aaatcatgaa tgccgtctga acaacaaacc gtccggattt aacgtttgcc cttggcctga
    20101 cagtcgctgc acacgccgta catataaagc gcgtgatcga cgatgcggta gccgttttcc
    20161 tcggcgattt tgtcttgcag ggcttcgatt tcgggattgt ggaattccgt tacctcgccg
    20221 cacttcacgc agacgatatg gtcgtggtgg tcgcccttgt ccaactcata aaccgccttg
    20281 cccgtttcaa aatggtggcg ttgcagaatg cccgcctgct cgaactgcgt cagcacgcgg
    20341 taaatcgtcg ccacaccgat ttccacgccc tcttccagca gaatgcggta cacatcttcc
    20401 gcactcaaat gctcttccgc gtgcttctcg aacaaatcca aaatcttcaa acgcgggccg
    20461 gtaaccttca gaccgctgtc tttcagttgc gcaatgttgc tgaatttttc cataatattc
    20521 aatatccctg taaaataata gacgctataa tacgcaattt cagcctgctt gcccactatc
    20581 acaccatagc agttcgcaat agcaaaaccg caacggcgga cgggcagtcg gacacagaca
    20641 gggtaaaata ccgcttaagc gtatgattat cgttcgcttt tataaaatat tcaagcagtg
    20701 ctacactaga catcccgatt tgcacagaaa ggttctcccg tgaacaaaac cctcatcctc
    20761 gccctttccg ccctgttcag cctgaccgcg tgcagcgtcg aacgcgtctc gctgtttccc
    20821 tcctacaaac tcaaaatcat ccaaggcaac gaactcgaac cgcgcgccgt tgccgccctg
    20881 cgccccggca tgaccaaaga ccaagtcctg ctcctgctcg gcagccccat actgcgcgac
    20941 gctttccata ccgaccgctg ggactatacc ttcaacacct cccgcaacgg catcatcaaa
    21001 gaacgcagca acctgaccgt ctattttgaa aacggcgtac tcgtccgcac cgaaggcgac
    21061 gccctccaaa atgccgccga agccctccgc gcgaaacaaa acgcagacaa acaataagga
    21121 acacacatga caccgctcaa aatcgccatc gccggcgcaa acggccgcat gggacgcgtc
    21181 ctcgtcgaag ccgtcaacaa ccatcccgac accgtccttt ccggcgcgct cgaacactca
    21241 ggctcagaag ccctcgggct ggacgcgggc tacgccgtcg gactcaaaac cggcatcgcc
    21301 atttcagacg acgttgacgc cgttctcgcc caaagcgacg tactcatcga cttcacccgc
    21361 cccgagccga ccctcaagca cctgcaaaaa tgcgttgaaa aacaagtcaa catcatcatc
    21421 ggcacaacag gcttcgacga tgcgggcaaa gccgccatcc gcgccgccgc cgaaaaaaca
    21481 ggcatcgttt tcgccgccaa cttcagcgtc ggcgtcaacc tcaccttcca catcctcgac
    21541 accgtcgccc gcgtcctcaa cgaaggctac gacatcgaaa tcatcgaagg ccaccaccgc
    21601 cacaaagtcg atgcccccag cggcacagca ttacgaatgg gcgaagtcat cgccggcgcg
    21661 ctcggccgcg acctcaaaca atgcgccgtt tacggccgcg aaggccacac tggtccgcgc
    21721 gatccttcca ccatcggctt tgccaccgtc cgcgcaggcg acatagtcgg cgaccacacc
    21781 gccctcttcg ccaccgacgg cgaacgcgtg gaaatcaccc acaaagccgg cagccgcatg
    21841 acctttgccg ccggtgccgt ccgcgccgca gtttgggtaa acggcaaaac gggtttgtac
    21901 gatatgcagg acgtactcgg gctgaacaac cgttaacccc catacaaaat gccgtctgaa
    21961 aagatattgt tcagacggca ttttgccgac aggcttcgta tcggcatatc aataaagttg
    22021 cttgtgcagc atgacaagct acggctcgtt taattgaaac tctcctgatc taaaaattcc
    22081 aactctattt cccggcaaac tatatctatg ataaaactgg tcggaagatt atacctacgc
    22141 cctattaatg ccagtgcacc tccataatcc aagatttcat catcctgctt taattctcca
    22201 agctccaagg tattatcgat atctttatct tggttctccg tagcgtatcc atagataaat
    22261 ttcagatagc tgaactgctt gaatttaatt tttacccagt ctgtgtaatt tggtgtagga
    22321 cacaattgcc taaaatagaa atttacgaag aacaaatgaa acaaggtacg taagcgtatt
    22381 agtataaact ataatcatat ataataaaat taatcagtta acgaaccatt atattttaac
    22441 cttaatccca ttcgggccag ttctgtttca tttggaattc ctcttaaata cttattgttt
    22501 gatgtgccat taatcacaat ttctccccct ttttttgtaa tacgtgctgc ttcgggaaaa
    22561 taatccatta accgctcaac atcccgcctc ttccaaaacc gcgcgcgcgg ccaaatccgc
    22621 cgtatctttt ttcaacagca ggtgcaacgc cccgaaatcc tgttgcagcg cggcaacctt
    22681 atcggggtgt tcgtaccagt ccgccaatgc cgccgccagt ttttccggtt ttgcttcaga
    22741 ttgcaataat tccggcacgg cctccttacc caacaggata ttcggcaggc cgacatgcgg
    22801 cactttgatt ttgcgtttca cataagcata ggtcagcggc gaaatcttgt agctgatgac
    22861 catcggacgc ttgcacaacg ccacctccaa agtcgccgta ccgctcgtta ccagcaccgc
    22921 atccgccgcc ctgcacaccg tttcagactg tctgtcggtt accgtcagcg ccaatccggc
    22981 aaactccggc cgctgcaaaa cttccgccaa acgccgcttc gtcgcctccg ttgcggcagg
    23041 cagcaggaag cgggcggcgg gatagcgttc caacaacaat aatgccgtct gaaaaaacac
    23101 cggcgccata tagtcgattt cgctgacgcg gctgccgggc agcagggcga atacggggat
    23161 gccgacatcc gcgcccaaag ttttccgcgc cgtttcacgg tcgtcttcca agggcataag
    23221 ctgtgccatc ggatgaccga caaactccgc acgtccgccc gcatcgagat aaagctgcgg
    23281 ctccatcggg aacaggcaca gcacgcggtt gacctgatgc acgattttgc ccacgcgttc
    23341 gcgccgccac gcccaaaccg acggactgac ataatgcagg gtcggaatgc ccgcccgttt
    23401 cagcttttcc gccacaccca gattaaaatc gggcgcatcg ataccgacaa agacatcagg
    23461 tttcaacgac agcaaatccc gtaccagctc cctgcgtatc cgtaaaattt ccggcagccg
    23521 cctgaccact tcgacaaagc cgcgcaccgc cagccgctcc tgatcataaa ggctctcgaa
    23581 accttccgcc ttcatcagtt ccccgccgat gccggttaac cgtgcctgcg ggcaacgctt
    23641 tcggatggcg cgtatcaggt gcgcccccaa caggtcgccc gacgcttcgc cgacactgac
    23701 ggcaatcaaa gggctttttt tatcaaccat attcgtctgt ccccacatat agtggattaa
    23761 caaaaaccgg tacggcgttg cctcgccttg ccgtactatc tgtactgtct gcggcttcgt
    23821 cgccttgtcc tgatttttgt taatccacta tactttcacg ccccgatgcc gtctgaagcc
    23881 ttcagacggc atcggggttc acattttcgt cccgttttcc aacatcaccg caaactgcgc
    23941 caaatccggc ggcggctccg ccttcaacac cagcggctca cccgtgagcg gatggttcag
    24001 gtgcagctcg gacgcgtgca aaaacatgcg cttcaaaccc aatttctgca aacgccggtt
    24061 cgcctgataa tcgccgtagc gttcgtcgcc cgcaatcgga cagccttgag attgcagatg
    24121 cacgcggatt tggtgcgtac ggcccgtttt cagcgttgcc cgcaccaaag tcaggtgcga
    24181 cagcccgaca ccgtgcaaaa tgccgtctga gaaacggctt aacacacgga acaccgtatg
    24241 cgccgactgc ccgtcctcgc tgacgcgtac catcttttcg ccttgtgcgc cggtatattt
    24301 gaacaggggc agtttgacat ggaaattgtc gtccggcagt ttgcccaccc ccagcgcaag
    24361 gtagattttt ttggggtggt cgttacggat agcttcgtgc agtttgacga gcgcgctgcg
    24421 tttcttcgcc accatcaaca agccgctcgt atccttgtcc aaacggtgga ccaactccaa
    24481 atacttcgcc tccggacggg cgcggcgcaa ctgttcgata acgccgaaac tcacgccgct
    24541 gccaccgtgt accgccacac cggaaggctt attgaccacc agtagcgcgt cgtcctcata
    24601 caccacctca aacgcacgcg ccggtacggc ggcacgcctt tcagacggca tttccttctc
    24661 cgccacgcgc acaggcggaa tccgcaccgt atctccctcc gcaatacggc tgtcgggttt
    24721 gcagcgtttc ttgttcaacc gcacctcgcc ggcgcggata atgcggtgga tatagccctt
    24781 gggcacgccc ttgaggattt ttatcagata gttatcaagg cgttgacccg cctcatgttc
    24841 ggcaacccct atcaggctga ccgaaccttt gcttatttcg tgcgttttca tctataatcc
    24901 gaacatccgt ttcagcagaa agcgcgtccg ccgcgccccc tgaaacggtt tactttaaaa
    24961 cggaatttta tattaaaaac gcactccgca aagcattttc cctgcgcctg ttcccagccg
    25021 gcaggcgcag aacgtagtca agtttgaatt gattttgccg tttcggcgcg gaagtaagac
    25081 ggcagcggag ccccaagccc cgaacgcaaa ccgcccgaaa acacaggcat cacgataaca
    25141 agaagaagcc ggcgcccatt tttccgaccg cagcgttcgg aacgcggcag gcagaccgcc
    25201 gcatcgatct ttatagcctt ctttatccga cccttccgca cacggttccc cggaacgtgc
    25261 atccctgcgg attttcaact caaaaactga ttaccggttt tatccgaaga catcggaaac
    25321 ccagccttac ggaatgccga accggaccgg cgcgcccgaa tgccgcccgt ccacgaggtg
    25381 atcatgaaaa gaatgttatt caacgcaacg caggccgaag agctgcgcgt tgccatcgtc
    25441 gacggacaaa acctgctgga tttggacatc gaaacgctgg gcaaagaaca gcgcaaaggc
    25501 aatatctaca aaggcatcat tacccgcatc gagccgtcgc tggaagcgtg tttcgtcgat
    25561 tacggaaccg accgccacgg ctttttgccg tttaaagaag tatcgcgttc gtatttcctc
    25621 ggctacgaag gcgggcgcgc gcgcattcag gacgtgctca aagaaggcat ggaagtcatc
    25681 gtccaagtcg aaaaagacga gcgcggcaac aaaggcgcgg cgctgaccac cttcatcagc
    25741 ctcgccgggc gctatctggt attgatgccg aacaatccgc gcggcggcgg cgtatcccgc
    25801 cgtatcgaag gcgaagagcg tcaagaactc aaagccgcga tggcgcaact cgacattccg
    25861 aacggcatga gcatcatcgc gcgtaccgcc ggcatcggcc gcagcgcgga agagttggaa
    25921 tgggatttga actacctcaa acaactctgg caggcaatcg aagaagcagg aaaagcgcat
    25981 cacgacccct acctgctctt tatggaaagc tcgttgctca tccgcgccat ccgcgactac
    26041 ttccgtcccg acatcggcga aattttggtg gacaatcaag aagtttacga ccaagttgcc
    26101 gagttcatga gctacgtcat gccgggcaac gcaggtcgtc tgaaactcta cgaagaccac
    26161 acgccgctgt tttcccgctt ccaaatcgaa caccagatcg aaagcgcgtt ctcgcgcagc
    26221 gtcagcctgc cctccggcgg cgcgatcgtc atcgaccaca ccgaagccct cgtctccatc
    26281 gacgtgaact ccgcacgcgc cacacgcggc gcggacatcg aagacaccgc cttcaaaacc
    26341 aatatggaag ctgccgaaga agtcgcccga caaatgcgcc tgcgcgactt gggcggcttg
    26401 gtcgtcatcg acttcatcga catggaaaac cccaaacacc agcgcgatgt ggaaaacgtc
    26461 ctgcgcgacg cactcaaaaa agaccgcgcc cgcgtacaga tgggcaaact ctcccgtttc
    26521 ggacttttgg aattgagccg ccaacgcctg aaacccgctt tgggcgaaag cagccacgcc
    26581 gcctgtccgc gctgcgccgg caccggcgta atccgcggca tcgaatccac cgccctgcac
    26641 gttttgcgca tggttcagga agaagcgatg aaggacaaca ccggcgaagt gcgcgcccaa
    26701 gtgcccgtcg atgtcgccac cttcctgctg aacgaaaaac gcgccgagct gtttgcaatg
    26761 gaagagcgtt tggatgtgaa cgtcgtcctg attccgaaca tccacctcga aaatccgcac
    26821 tacgaaatca accgcatccg caccgacgac gtagaagaag acggcgaacc gagctacaag
    26881 cgcgttgccg agcctgaaga agacgaatcc gccaaacctt
//
LOCUS       DAXGCP010000019        26820 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.019, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000019 DAXGCP010000000
VERSION     DAXGCP010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26820
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.019"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            110..1558
                     /gene="gnd"
                     /locus_tag="ACFJCW_000702"
     CDS             110..1558
                     /gene="gnd"
                     /locus_tag="ACFJCW_000702"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HFC4150906.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKETGIIGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFVEQLLPLLEEGDIIIDGGN
                     ANYPDTTRRTHYLAGKGILFVGAGVSGGEEGARRGPSIMPGGDKRAWEAVKPIFQAIA
                     AKTPQGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLAEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTATPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLGNIRDAYEANPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            1621..2892
                     /gene="waaA"
                     /locus_tag="ACFJCW_000703"
     CDS             1621..2892
                     /gene="waaA"
                     /locus_tag="ACFJCW_000703"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HFC4150907.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPHP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRRRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMKECRRAGVPLFLANARLSEKSLN
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEDMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLAVVPRHPEHFQTTFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVGSGCQNII
                     EPLSCGVTTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKNLSGEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVREAVCGHRGR"
     gene            2933..3382
                     /locus_tag="ACFJCW_000704"
     CDS             2933..3382
                     /locus_tag="ACFJCW_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HFC4150908.1"
                     /translation="MSIYAVAHIIHLYCATAFVGGVFFEVLVLSVLHTGRVSREARRE
                     VEKAMSYRAVRVMPFAVGLLFASGIVMAANRYLPISGEPFATSFGTMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            3415..4389
                     /locus_tag="ACFJCW_000705"
     CDS             3415..4389
                     /locus_tag="ACFJCW_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HFC4150909.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGIKET
                     LAWSGLWVAVSCLFAGWLYFELAGNPGYGAAAAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEEEDLANSRLLNAVKKVVPVGTAFHGEKFFTVENGKKIATPLFLVLIMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLGFIGVKMLVMHWVHIPISVSLSVVFGALGASILTSLIYTKKQPDK"
     gene            4458..4533
                     /locus_tag="ACFJCW_000706"
     tRNA            4458..4533
                     /locus_tag="ACFJCW_000706"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4491..4493,aa:Lys,seq:ttt)
     gene            4753..6006
                     /gene="murA"
                     /locus_tag="ACFJCW_000707"
     CDS             4753..6006
                     /gene="murA"
                     /locus_tag="ACFJCW_000707"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HFC4150910.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVATTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVNQHLKGLEAMGAEIAIEHGYVKAKGKLKGARVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGA
                     GELYGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVERLSGAVVKATDLRASASLVIAGLAARGETVVERIY
                     HLDRGYENIEKKLGSVGANIERVSG"
     gene            6087..7280
                     /locus_tag="ACFJCW_000708"
     CDS             6087..7280
                     /locus_tag="ACFJCW_000708"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HFC4150911.1"
                     /translation="MAFLKLTEQNVRGKTVLIRADMNVPFKGGKISDDTRIRASLASV
                     KYCLDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKDVKVLNDWRENKPAL
                     NAGEVVMLQNVRINKGEKKNDLELGKAYAALCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADAEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKTRR
                     VNGLI"
     gene            complement(7332..7580)
                     /locus_tag="ACFJCW_000709"
     CDS             complement(7332..7580)
                     /locus_tag="ACFJCW_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HFC4150912.1"
                     /translation="MLTPEQVKALIAGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(7673..8590)
                     /gene="ftsX"
                     /locus_tag="ACFJCW_000710"
     CDS             complement(7673..8590)
                     /gene="ftsX"
                     /locus_tag="ACFJCW_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HFC4150913.1"
                     /translation="MSIIHYFSLHVESARSALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITVYMETAAAQSDSDTVRSLLTRDKRLDNIRFIGKEDG
                     LAELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSIFSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYVGELG
                     LVFGFVIALGVFGAWLATTQHLLCFKAKK"
     gene            complement(8587..9237)
                     /locus_tag="ACFJCW_000711"
     CDS             complement(8587..9237)
                     /locus_tag="ACFJCW_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HFC4150914.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSMGKVLCNGQDLGTLSDNQIGFMRQHIGIVFQDHKILNDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(9431..9913)
                     /locus_tag="ACFJCW_000712"
     CDS             complement(9431..9913)
                     /locus_tag="ACFJCW_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HFC4150915.1"
                     /translation="MKRLNLAAIALAATFAAHTASADELAGWKDNTPQNLQSLKAPVR
                     IANLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYRQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            10037..10390
                     /gene="arsC"
                     /locus_tag="ACFJCW_000713"
     CDS             10037..10390
                     /gene="arsC"
                     /locus_tag="ACFJCW_000713"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HFC4150916.1"
                     /translation="MSEIKIFHNPRCSKSRAAVSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLESARGMMRVKDDLYKELGLDNPDLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            10387..11043
                     /locus_tag="ACFJCW_000714"
     CDS             10387..11043
                     /locus_tag="ACFJCW_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HFC4150917.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPLLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGSRFLGWLSD
                     "
     gene            11159..12553
                     /gene="gltX"
                     /locus_tag="ACFJCW_000715"
     CDS             11159..12553
                     /gene="gltX"
                     /locus_tag="ACFJCW_000715"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HFC4150918.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILGGMKWVGLDYDNADNVVYQTRRFDRYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCAVVDDYDMGVTHIIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTTEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPDGKLTELVKPRLA
                     LRDIHETEKPALEDVLALVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAKAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALISKEEVLKRIRA"
     gene            12574..12980
                     /locus_tag="ACFJCW_000716"
                     /pseudo
     CDS             12574..12980
                     /locus_tag="ACFJCW_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688080.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            12984..13475
                     /locus_tag="ACFJCW_000717"
     CDS             12984..13475
                     /locus_tag="ACFJCW_000717"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC4150919.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIR
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSAAVKRHDMENFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDV
                     DKV"
     gene            complement(13751..16345)
                     /gene="mutS"
                     /locus_tag="ACFJCW_000718"
     CDS             complement(13751..16345)
                     /gene="mutS"
                     /locus_tag="ACFJCW_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HFC4150920.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYELFLDDAVEAA
                     KLLDITLTTRGQMDGVPIKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTADK
                     LNDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDSKEHAVSIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAVTALESQYEPL
                     QCHLKSIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSATGSSLLETLKAVFP
                     ETLPVAETLKAAVMPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQDQALALEKQLFDGVLKNLRTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPVVHIENGRHPVVEQQVRHFTANHTDLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSI
                     VLMDEVGRGTSTFDGLALAHAIAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGRDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKAAQKHLNGLENQAAANRP
                     QLDIFSTMPSEKGDEPNVDCFVDKAEEKHFEGILAAALENLDPDSLTPREALSELYRL
                     KDLCKSVS"
     gene            16776..17780
                     /gene="gap"
                     /locus_tag="ACFJCW_000719"
     CDS             16776..17780
                     /gene="gap"
                     /locus_tag="ACFJCW_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HFC4150921.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHGIEVAAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGREIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPATKEEINAAMKAASSESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(17932..18612)
                     /gene="tsaA"
                     /locus_tag="ACFJCW_000720"
     CDS             complement(17932..18612)
                     /gene="tsaA"
                     /locus_tag="ACFJCW_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HFC4150922.1"
                     /translation="MTYTITPIGTARSPYKQKFGIARQPGLVSAAEACIELNPEFTAD
                     SVRGLEDFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGSDLLDGTPIVDIKPYIPFIESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     INLSPTPL"
     gene            19072..19707
                     /locus_tag="ACFJCW_000721"
     CDS             19072..19707
                     /locus_tag="ACFJCW_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HFC4150923.1"
                     /translation="MIVSIDVDAQKTFTPLCPDELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHMAAKWLVDNPVDMLKPTGLSDADLTWVAHAMVGTRGYELLDGLPSAKEYDY
                     CVWKGVDPELHPYGACFHDIEEKLSTGLIEWLRCQNTNMVIVGGLATDYCVKTTVLQL
                     LKGGRWQVIVNEAACRGIAPDTIEAAWQEMRSSGAIILKNAEKIKKYINNQ"
     gene            19744..20712
                     /gene="waaC"
                     /locus_tag="ACFJCW_000722"
     CDS             19744..20712
                     /gene="waaC"
                     /locus_tag="ACFJCW_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HFC4150924.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCSDVELHWLCEAGFAGI
                     ARLHPFVKKVHVMKWRQWRKHLFQAETWREMGRLKQALLQEAFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKHSAREGVAALAYDKKYVVPKGRNAVWRNRDLFAQVFGYAMPETQV
                     FGLSVPEASRLKNLAQPYYAALHATSRDSKLWPMENWRELLQKLNQKQQCNVYLPWGN
                     EAEKVRAEQIADGLPFTIVCAKMNLLQAAYLLKHAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSAIAKNVGNIGQIPTADLVYQTLMDCVSADKG"
     gene            20938..21687
                     /locus_tag="ACFJCW_000723"
     CDS             20938..21687
                     /locus_tag="ACFJCW_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HFC4150925.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHIETDVKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFVSKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLDSADLATDISPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            21698..22633
                     /locus_tag="ACFJCW_000724"
     CDS             21698..22633
                     /locus_tag="ACFJCW_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HFC4150926.1"
                     /translation="MSVLIIAEHDNKQLNPATLHAVAAAAKLGKVDLLVVGNGASSVV
                     EFAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQADSEKLVLTFRVTAFDAVAAQGGN
                     AEVINVKTTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSVEKFSEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLIELLKN"
     gene            22696..23307
                     /locus_tag="ACFJCW_000725"
     CDS             22696..23307
                     /locus_tag="ACFJCW_000725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HFC4150927.1"
                     /translation="MITTYKTITSPTQAEFKDKGSRFIAFAYPIRTLADVKKYLNLLK
                     EEHYKARHWCYAYRLGVNGMQFRGNDDGEPPGSAGRPILGQIDSVGITDVLVVVVRYF
                     GGALLGVPGLIHAYKEATAQALAIAEVVEKNIEKTVWLKCEYPFLNEAICIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEACVAAWKNTRQVEVNTEKPFE"
     gene            complement(23359..23664)
                     /locus_tag="ACFJCW_000726"
     CDS             complement(23359..23664)
                     /locus_tag="ACFJCW_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HFC4150928.1"
                     /translation="MDEIQSKYREWCHLLLQLEENIRRWKYAVALIRDMDNFYTHEYQ
                     VRHQTIEDGVELNLQTEGEYSIMSEDALWNAPGEFHQLAWLYLCSSVDTLDRYTQEN"
     gene            23834..25105
                     /gene="purD"
                     /locus_tag="ACFJCW_000727"
     CDS             23834..25105
                     /gene="purD"
                     /locus_tag="ACFJCW_000727"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HFC4150929.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIESKLQ
                     NIALTAYQDLIEFCRKENIVFTVVGPEAPLAAGIVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMVKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLVAGKGVIVAMTLD
                     EAHAAIDDMLLGNKMGNAGERVVIEDFLQGEEASFIVMVDGNHVLPMATSRDHKRLLD
                     GDKGPNTGGMGAYSPAPVVTPAVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGRLDSVKAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDDVNRIGKVFHAGTTVNEKGDVLTNGGRILCVVGLGDDVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            25139..25741
                     /locus_tag="ACFJCW_000728"
     CDS             25139..25741
                     /locus_tag="ACFJCW_000728"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HFC4150930.1"
                     /translation="MTDALQTAFYIMLFSRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQLEQLQPLLQMPFENIQTMLRNEWPA
                     PKTFLLLAKSGVLPALRGKRRSKLAVRVPDHTGARRLCQALGMPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            25756..26271
                     /locus_tag="ACFJCW_000729"
     CDS             25756..26271
                     /locus_tag="ACFJCW_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150931.1"
                     /translation="MKTFLHTQRKNFLDGISLHDCYRTAIKVEGRNVCFDFEDGFVVL
                     DNNPNNQAGKHLKTDFSRVVLTHENRNAEDDYLVDIFEDIVFLGKRLFTVRKFLDFSE
                     LLEMINAQGYFLEFLYLYECIGVKTSDYFLEAVLVTGRSRECKKCFIKIMRASSFVYQ
                     WNNLRLNSEIV"
     gene            complement(26423..>26820)
                     /locus_tag="ACFJCW_000730"
     CDS             complement(26423..>26820)
                     /locus_tag="ACFJCW_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HFC4150932.1"
                     /translation="LLPILITACSTPDKSARWENIGTISNGNIHTYINKDSVRKNGNL
                     MIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSSLQLFDTKNTEISTQN
                     YTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         6379 a         6116 c         7660 g         6665 t
ORIGIN      
        1 aagcgtaaag gcatcttttc aaaaaattaa aaagttaagg attgttaaac aagtgtaaat
       61 caggtagagt tgcagccgat aaattaaatc tataacggag cttcctgcaa tgaaaggcga
      121 tattggcgta atcggtttgg cggttatggg gcaaaacctg attttgaata tgaacgattg
      181 cggatttaag gttgtcgcct acaaccggac aatcggtaaa gtggacgaat ttttaaacgg
      241 tgcggcaaaa gagacgggca ttatcggcgc gtattccctg caagacttgg tcgataagct
      301 ggcaaaaccg agaaaaatca tgatgatggt tcgcgcaggt tcggtggttg acgactttgt
      361 cgaacaactg cttccgctgt tggaagaagg cgacatcatt atcgacggcg gcaatgccaa
      421 ttaccccgac acgacacggc ggacacatta ccttgccgga aaagggattt tgtttgtcgg
      481 cgcgggggta tccggcggcg aagaaggcgc gcggcgcggg ccgtccatca tgccgggcgg
      541 ggataagcgc gcttgggaag cggtcaagcc gattttccag gcgattgccg ccaaaacgcc
      601 gcagggcgaa ccgtgttgcg actgggtcgg caaggatggc gcgggacatt ttgtcaaaat
      661 ggtgcacaac ggcatcgaat acggcgatat gcagctgatt tgcgaagcgt accagtttat
      721 gaaagacggt ttggggctgt cctacgacga aatgcaccgc gtgtttgccg agtggaacaa
      781 aaccgagctg gattcttatc tgattgaaat cacagcggca attttgggct ataaggacga
      841 aggcggcgaa ccgctggccg agaaaatcct cgatacggca gggcaaaaag gcacgggcaa
      901 atggacgggc atcaatgcct tggatttggg cattccgctg acgctgattt ccgaagccgt
      961 attcgcccgc tgtgtttcgt cgttcaaaga acagcgcgtg cagaccggca agctgttcgc
     1021 ccgaaccgcc acgcccgtcg aaggcggcaa acaagaatgg gtcgaggcgt tgagacaggc
     1081 tttgcttgcc tccaaaatca tttcctacgc acaaggcttt atgttgatcc gcgaagcggg
     1141 cgaaagttac ggctgggatt tggactacgg caacactgcg ctgctgtggc gcgaaggctg
     1201 catcatccgc agcgcgtttt tgggcaatat ccgcgacgcg tatgaggcca atcccgattt
     1261 ggtgttcttg ggtgcggatc cgtatttcaa aaatattttg gaaaactgcc tgccggcatg
     1321 gcgcaaggtg gttgccaagg cggtcgaatg cggcatccct atgccctgca tggcttcggc
     1381 gattacgttc ttggacggct atacgaccga acgcctgcct gccaacctct tgcaggcaca
     1441 gcgcgactac ttcggcgcgc acacttacga gcgcaccgac aaaccgcgcg gcgaattttt
     1501 ccataccaac tggacgggca agggcggaga taccgcttcg acaacctacg atatttgatt
     1561 ccgttgccga aatgccgtcc gaaccgttcg gacggcattt gttttgcagg aaatagaaag
     1621 atgttccaat ggctttatga tgtattgtgg ctgcttgcgc cgatatggat acggcgttat
     1681 ttggacaaac gctccggaag tgccccggca taccgggcgc atagggacga gcgtttcggc
     1741 aagccgcatc cgaatcccgt taccggcgcg gtttggatac acgccgtttc ggtcggagaa
     1801 acgcgtgccg cccagccctt gatacgcgag ttgcggcggc gttttcccga tgcgccgctg
     1861 ctgatgacgc agatgacccc gacgggacgg gaaaccgcgc aagttctgtt tcccgatgcg
     1921 caatgccgct atcttccgta tgacaaaaaa acgtgggtac ggcagttttt gcgcgaacac
     1981 cgcccgatgt tcggcatttt gatggaaacc gaaatctggc ccaatctgat gaaggaatgc
     2041 cggcgagcgg gtgtgccgct gtttttggcg aatgcgcggc tgtcggaaaa atcgctgaac
     2101 ggttatctga aagtccgccg cctgatccgt cccgcagccg cttcgctgac gggctgtctg
     2161 gcgcagacgg aggcggatgc ggcgcggttg gcgaaattgg gcgcggcatc cgtgcaggtg
     2221 tgcggcaata ccaaatacga cctgatgccg tctgaagaca tgaaaacgct ggcggggcag
     2281 tttgaaaaac gcatcggagg ccggccggtt gccgtgtgcg gcagcacgcg cgtttatcgg
     2341 ggcgaagacg aggcggaaaa actgctggcg gcgtggcaac aatatcgcgg cgatgccctg
     2401 ctggccgtcg tgccgcgcca tcccgagcat tttcagacga catttgaaac ggcgaaacgc
     2461 ttcgggttta aggttcagcg gcgcagcgac ggtttgccgg tcgaacccga tacgcaggtg
     2521 tggataggcg acagtatggg cgagctgtat gcgtattacc tgtgcgccga tgtcgctttt
     2581 gtcggcggca gtctggtcgg ttcgggctgt cagaacatca tcgaaccgct ttcctgcggc
     2641 gttacgacga tattcggctt ttcgacctac aatttttccg aagcctgccg gcacgccttg
     2701 gcatcgggtg cggcggttca agtcgaatcg gcggacgcgt ggcgtgaagc cgttgaaaaa
     2761 aacttatctg gcgagggggg cggaatgcag atgcaggcgc gcgtggacgg ctttatcgca
     2821 caacatcgcg gagcgggcgc gagaatcgcc gaggcggtgc gggaagcggt atgcggacat
     2881 cgggggcgat agtgatacaa tccgtatccg agttttccgg ttggagcatc gtatgagtat
     2941 ttatgccgtc gcgcacatca tccacctgta ttgcgccacc gcctttgtcg gcggcgtgtt
     3001 ttttgaagtg ctggttttgt ccgtcctgca tacgggacgg gtgtcgcgcg aggcgcggcg
     3061 cgaagtggaa aaggcaatgt cttaccgcgc cgtcagggtg atgccgtttg cggtcggact
     3121 gctgttcgcc agcggcatcg tgatggcggc aaaccgctac cttcctatat cgggcgaacc
     3181 gtttgccact tccttcggta cgatgctgac gctgaaaatc ctgttggcgt tcagcgtgtt
     3241 ggcgcacttc gccatcgccg tcgtcaaaat ggcgcgttcc acgctgacgg tcggctggtc
     3301 gaaatacata cacgccgtcg tctttaccca tatgctgctg attgtctttt tggcaaaagc
     3361 gatgttttat atcagctggt aacacaacta catttcaaat caggagattg aaccatgaca
     3421 gaatatcccg gcatcgggtc gccgttgttt tacggcgttt tttttgcggc agtgctggtc
     3481 atgattgcct tggatatgtt ttcgctgaag aaaaacggca gccataaagt cggcatcaaa
     3541 gaaaccttgg catggagcgg cttgtgggtt gccgtatcct gcctgttcgc aggctggctg
     3601 tatttcgaac tcgccggcaa tcccggctac ggcgcggcag ccgcaaaaga aaaagtattg
     3661 gaattcttta ccggctacat tttggaaaaa tcgttggcag tcgacaatat tttcgtgttc
     3721 ctgatgatat tcggctactt caaagtcgca ccgcagtttc aacaccgcgt gctgctgtac
     3781 ggcgtattgg gcgcattggt attgcgcacc gtcatgattt tcgtcggcgc ggcactggtt
     3841 cggcagttcg agtggattct gtatctgttc ggcgcgttcc tgctctatac cggcatacac
     3901 atgatgaagc ccgaaggaga tgaggaagag gatttggcaa acagcaggct gctgaatgcc
     3961 gtcaagaaag tcgttccggt cggcacggcg tttcacggcg agaaattttt taccgtcgag
     4021 aatggcaaaa aaatcgccac gccgctgttt ttggtgctga ttatgattga attgagcgat
     4081 gtcgtttttg ccgtggacag tatccccgcc gtctttgccg ttaccaccga tccgtttatc
     4141 gtgctgactt ccaatatttt cgctattttg ggtttgcggg cgatgtattt cctgctggcg
     4201 gatgtggcgg aacgctttat cttcctgaaa tacggcttgg cattcgtgtt gggttttatc
     4261 ggtgtgaaaa tgctggtgat gcattgggta cacatcccga tttccgtttc gctgtcggtc
     4321 gtgttcggcg cgttgggtgc atcgatactg acctcgttaa tttatacgaa aaaacagcct
     4381 gataaataaa acgccgtctg aacgccgaca aaatggttga cagcatcagg cttgatgtat
     4441 aaactttcaa agttttcggg tcgttagctc agtcggtaga gcagcggact tttaatccgt
     4501 tggtcgagcg ttcgaatcgc tcacgaccca ccaggtaaag caaaaaagct gagttttcaa
     4561 aactcggctt tttttgtttt ccgacaatcc ttgttcggaa agcgcggcat ttcgtcaaat
     4621 tctttggtgc ggcttccgta tttttcccga aaatccctta taattccgcc tctgcaacct
     4681 tcatcgggtg atgctttatg cattgtcccg agtattgaaa tattagcaag tacccaccag
     4741 gaaagaacaa acgtggacaa actgaaaatc tccgcaaacg gcccgctcaa cggggaaata
     4801 acggtctcgg gcgcgaaaaa cgcggcattg ccgctgatgt gcgcgggttt gctgacatcg
     4861 ggtacgttgc gcctgaaaaa cgtccctatg ctggcagatg tcgcaaccac gcaaaagctg
     4921 cttcagggca tgggcgcgcg cgttctgacc gacaatatca gcgaatttga aatcaacggc
     4981 ggtacggtca acaatacctg cgccccttac gaattggttc ggacgatgcg cgcttcgatt
     5041 ttggtgcttg gcccgacgct ggcgcgtttc ggcgaggcgc aagtcagcct gccgggcggc
     5101 tgcgccatcg gttcgcgccc cgtcaatcag catttgaaag gcttggaagc gatgggggcg
     5161 gaaatcgcca tcgaacacgg ttacgtcaaa gccaaaggca aactcaaagg tgcgcgcgtg
     5221 gcgatggatg tcgttaccgt cggcggtacg gaaaacctgc tgatggcggc gacgctggcg
     5281 gaaggtacga cggttttgga aaactgcgcc atcgagcctg aagtggtcga tttggcggaa
     5341 tgcctggtca aaatgggcgc gaaaatcagc ggcatcggaa catcgaccat gattgtggaa
     5401 ggtgcgggcg agctgtacgg ctgcgaacac agcgtcgtcc ccgaccggat tgaagcgggg
     5461 acgttcctgt gtgcggtggc gataaccggc ggcagggtgg ttttgcggaa tgccgccccg
     5521 aaaacgatgg aagtggtgtt ggacaaactg gtcgaggcag gtgcggtgat tgaagcgggc
     5581 gacgattgga tcgccatcga tatgcggcag cgtccgaagg cggtggacat ccgcacggtc
     5641 gtccatcccg gcttccccac ggatatgcag gcgcagttta tggcattgaa tgccgtggcg
     5701 gaaggaagct gccgcgtggt ggaaacgatt tttgaaaacc gctttatgca cgttccggag
     5761 ttgaaccgga tgggggcgaa cattacaacc gagggcaata cggcatttgt gcagggtgtg
     5821 gaacggcttt ccggcgcggt cgtcaaggcg acggatttgc gcgcgtccgc cagcctagtt
     5881 atcgccggtt tggcggcgcg cggcgaaacc gtggtcgaac ggatttacca cttggatcgc
     5941 ggttatgaaa atattgaaaa aaaactcggc agcgtcggtg cgaacatcga gcgcgtatcc
     6001 ggctgatcgg gttgcgatgc cgtctgaagg cttcaggcgg catcaattgt ttctgtatcg
     6061 caaacactga ttgaaaagga ctgattatgg catttttaaa actgaccgaa caaaacgtgc
     6121 ggggcaaaac cgtcctcatc cgcgccgata tgaacgtgcc gttcaaaggc ggcaaaatca
     6181 gcgacgacac ccgtatccgc gcctcgctcg cgtccgtcaa atactgcttg gacaacggcg
     6241 cgtccgttat cgtgatgacc cacttgggcc gcccgaccga aggcgagttc caccccgaag
     6301 acgatgtcgc ccccgttgcc gcgcacttgg gcggcctgtt gggcaaagac gtgaaagtat
     6361 tgaacgactg gcgcgaaaac aaacccgccc taaacgcggg cgaagtcgtg atgttgcaaa
     6421 acgtgcgtat caacaaaggc gagaagaaaa acgatttaga actgggcaaa gcctacgccg
     6481 ccttgtgcga cgtgttcgtc aatgatgcgt tcggcaccgc acaccgcgcc caagcttcga
     6541 ccgaagccgt tgcccaagcc gcgcccgtcg cctgcgccgg cgtattgatg gcgggcgaac
     6601 tcgacgcttt gggcaaagcc ttgaaacagc ccgcgcgccc gatggtggcg attgttgccg
     6661 gcagcaaagt gtccaccaag ttgaccatcc tcgaatcgtt ggcggacaaa gtcgatcagc
     6721 ttatcgtcgg cggcggcatc gccaacacat tcctgttggc ggaaggcaaa gccatcggta
     6781 aatcgctggc ggaacatgat ttggtggaag aatccaaaaa aattatggcg aaaatggcgg
     6841 ccaaaggcgg ttctgtgccg ctgccgaccg atgtcgtcgt tgccaaagcc tttgccgccg
     6901 atgccgaagc ggtggtaaaa gacatcgccg acgttgccga agacgagatg attttggaca
     6961 tcggcccgaa atccgccgcc gcgcttgccg atttgcttaa agccgccggt acggtcgttt
     7021 ggaacgggcc ggtcggcgtg ttcgagttcg atcaattcgc aggcggtacg aaagcccttg
     7081 ccgaagccat cgcccaaagc aaagcgttct cgattgcggg cggcggcgac acgctggcgg
     7141 cgattgccaa attcggcgtt accgaacaaa tcggctacat ctccaccggc ggcggcgcgt
     7201 tccttgagtt cttggaaggc aaagagctgc ctgccgtagc cgctttggaa aaaacgcggc
     7261 gagtaaacgg tttgatataa aaaaatgccg tctgaaacga aatggtttca gacggcattt
     7321 ttgtgtggcg gttattgtgc tttggcagcc cattccgccg gagtggcggc aaccgaaatg
     7381 gaaagtgcgt gcagttcgtt gctttccagt tgggctttga gtccgtcttt aatcaggcgg
     7441 tggcgcgcga ggcgtgcctt gccttcaaat tctgatgaaa cgatgacggc gaaaaaatgg
     7501 tgtccgtcgc cttctacttc gatgtgttcg cattttgcca cgcctgcaat cagggccttg
     7561 acttgttcgg gtgtcagcat agtggggagt ccttattggg gaaatgcgcc attataccgg
     7621 caaatcgaaa ttccgtctga aaacggcttc agacggaatt tttgacggtg ttttattttt
     7681 tggctttgaa gcagagcagg tgttgtgtgg tggcaagcca cgcgccgaat acgcccaacg
     7741 cgatgacgaa gccgaacacc agcccgagtt cgccgacgta gaagaaacgc cagccgatgt
     7801 tcaagccgta gggtttgaag atggcatcga ccaaggggcg cacggcagag agcagccaac
     7861 cgcaaagccc taagctgacg gcggcggaga agatactctg ccacatagcc tgataaagga
     7921 aggggcggcg gataaacgac gcgggcgcac ccaggagttt ggtgatttcg atttcttctt
     7981 tgcggctgag gatttgcagt cggatggtgt tgtgtgcgac aaggacgaaa gccataccca
     8041 gcgtcaggga aagaaaccat aagattttgc ggatgaactc gttgatttgg tacagcgttt
     8101 gcacccattc ggtatccata gacgcggatt cgaccatagg cagcttggta atgtcccggt
     8161 agattgcctg catttgggcg ggcgtggttg ccgggtcggg ggtaacgata aagacatccg
     8221 gcagggggtt gccgtcaagc atggaaatca gattttggtc gaggttggac tgtaattccg
     8281 ccaaaccgtc ttccttgccg atgaagcgga tgttgtcgag ccgtttatcg cgcgtcagca
     8341 ggctgcgtac ggtatcgctg tcgctttgtg cggcggcggt ttccatatag acggtgattt
     8401 gcggcgactc gttgagtttg cccaacacgc tttgcccgct ttggatgccc agatacataa
     8461 acagcggcag ggtcatcgcg acggcaagca ttatgagggt aagcagtgtg ccgaagggtt
     8521 ggcgcagaag ctgtttgagt gcggagcgcg cggattcgac gtgcagcgag aagtagtgga
     8581 tgatgctcat gcgagtcgtc ctttcgagag gcgcaggatg cggtgtccgt agtccgccat
     8641 cagggtttcg tcatgtgcgg cgacgatgac ggtggttccc gcttcgtgga aggttttgaa
     8701 caattccata atatcgagcg cgtaggcacg gtcgaggttg gcggagggtt cgtcggcaat
     8761 cagcaggccg ggctggtgga cgacggcgcg ggcgatgcac aggcgttgtt gttcaccgcc
     8821 cgagagggtt acgggatcgt ccaattctcg tcctttcaag ccgacttttt cgatggcgat
     8881 gcgggcgcgt tcttcggctt tgcgcggcgg atagccgata atccgcaggg gcaggatgac
     8941 gttttgcagg acattgcggt cgttgaggat tttgtggtct tggaacacga tgccgatgtg
     9001 ttggcgcata aagccgattt ggttgtcgga caatgtgccg aggtcctgtc cgttacacag
     9061 gactttgccc atgctcggct tggtgatgcc cgaaatcagc ttgaggacgg tggatttgcc
     9121 cgaaccggag tgtcccgcga taaaaatcat ctcgcctttg ttgatttgga agctgacgtt
     9181 tttcagggct tcaaaaccgc cgggataggt tttggaaact tgttcgaaac ggatcatagg
     9241 aggtcctgta aggaagggcg gcatatcgtt tcgggcggtt gcgtccgcag ggatatgccg
     9301 tctgaacaat aggtaagaca gtaccgatta taaagattcc gcctgttttt agatagtgga
     9361 taagtttggc ggataccgaa ggccgggcgg gaaaatgccg tctgaagcgg cttcagacag
     9421 catccggcgt ttaacggcat tttgaatggg cgagtttgac ggcttcggtc aggcttttct
     9481 cgttcacctc tcctgtaatg gtctgcctgt atccgcattt cggggcttcg acgacggtaa
     9541 agggcagtac gccgacattg tttccgtagg atttcataaa gtttcggctg ttcgccccgg
     9601 tgtaacgcca aatcgggtag ctgaccgggg tctgcttgag aaagttgccg atattgtcgg
     9661 atgtgtcgag cgcgatgccg accatatcga cgctgccttt tttctgcgct ttgtaccatt
     9721 tggacatggc gggcatctct tttcgacacg gaccgcacca agtcgcccat aggttggcga
     9781 tgcggacggg ggctttgagc gattgcaggt tttgcggggt attgtctttc catccggcca
     9841 gttcgtctgc cgaggcggta tgtgcggcaa atgtggcggc aagggcgatt gcggcgagat
     9901 tcaagcgttt catcgttttg tcctttgtat gtcgattcgg gtattgtaaa ccgtttggta
     9961 cggttggagg cggggtattg agtaaaaccc tgcgtaagcc gataataagg ggattgtcga
    10021 gaagtaggga aatgtcatgt ctgaaatcaa aattttccac aatccgcgtt gcagcaaatc
    10081 gcgtgccgcc gtgtccctat tggaagaacg cggcattgct gccgaagtgg tcaaatattt
    10141 ggatacgccg cccgacttgt ccgaattgaa ggatattttc aacaaattgg gcttggaatc
    10201 ggcgcgcggg atgatgcgcg tgaaagatga tttgtacaag gaattgggtt tggacaaccc
    10261 cgatttggac aatgacgcgc tgctgcgtgc catcgccgat catcccgccc tgttggagcg
    10321 tccgattgtt ttggcaaacg gtaaggcggc tgtcggcaga ccgttggaaa atatcgaagc
    10381 ggtattgtga acaaacggct gttttgcagc cgcaacggct tgcgctatta cctgttgggc
    10441 ggtttctgtt tgagtgtttt tccgcttttg ctggtgtttg cctcatccgt ttgggcggtt
    10501 tatcggacgg gcgggcaggt tttgccgccg tatgtccggg cggatgccgc gctggtgttg
    10561 ggcgcagccg cgtgggacaa acgcccttcc ccggtttttc gggaacgcat caaccacgcc
    10621 atcgcgcttt accaaagccg cagggtaggc aaaatcgtgt ttacgggagg gcgaaccaaa
    10681 aaaggctata tgaccgaagc cgaggtcggg cggcggtacg cgctcaaaca gggggttccg
    10741 gcgcgcaaca tcctgtttga aaacacttcg cgcaacactt atgaaaacct gaacaacatc
    10801 cgtccggttt tgcgtgccaa cggtattgcc agcgtggtga ttgtcagcga tccctaccat
    10861 ttggcgcggg cggcggaaat ggcggaggat ttgggtgtcc gcgtttatat gtctgccacg
    10921 ccgaccacgc ggtttgatgc gggaaataag aaaaaaatct ttatgctgca agaggggtat
    10981 gcgttatccc tctaccgttt ggaaaaatgg ggcagccgct ttttgggatg gctgtctgat
    11041 tgaggcggta gaaaatgccg tctgaaactt atccgcaggc agggttcgga cggcattttt
    11101 gatgcctaag cacggtaaaa acagtaaaat aaacgctttc aaagatttcg gagccattat
    11161 gaccgtcaaa acccgtttcg cccccagccc caccggttac ctgcacatcg gcggcgttcg
    11221 caccgccttg ttttcgtggg cgtttgcccg ccatcataaa ggcgaatttt tattgcgtat
    11281 cgaagacacc gacttggcac gttccaccgc cgaatccgtc aacatcatcc ttggcggcat
    11341 gaaatgggtc ggtctcgatt acgacaacgc cgacaacgtg gtgtaccaaa cccgccgttt
    11401 cgaccgttat aaagaagtca ttgccgaact cttggcaaaa ggcgatgcct actactgcta
    11461 ttgcagcaaa gaagaattgg aagcgatgcg cgagaaagcc gaaaaagaag gcacggcgac
    11521 ttacgaccgc cgctggcggc cggaagcagg caaaaccctg cccgaaattc ctgcaggcgt
    11581 gcaacccgtc gtccgcttca aaacgccttt ggacggcgtt accaaatgga cagacttggt
    11641 caaaggcgaa atctccatcc ccaacgaagc cctagacgac ctgattattg cccgcgccga
    11701 cggtacgccg acctacaact tctgcgccgt ggtagacgac tacgacatgg gcgttaccca
    11761 cattatccgc ggggacgacc atgtgaacaa caccccgaaa caaatcaaca tcttgaaagc
    11821 catcggcgcg aacctgcccg aatacgggca tctgccgatg attctcaacg aacaaggcaa
    11881 aaaaatctcc aaacgcagcg gcgataccgt cgccattacc gatttcggcg caatgggcat
    11941 tctgcccgaa gcgatgctca actatttggc gcgtttgggc tgggcgcacg gcgacgatga
    12001 gtttttcacg acggaacaat tcatcgaatg gtttgatttg aaagacgttt ccccgtcccc
    12061 aagccgtatg gatttgaaaa agctctattg gatcaacggc gaacacatca aaatcacacc
    12121 cgacggcaaa cttaccgaac tcgtcaaacc gcgccttgcg ctgcgcgata ttcatgaaac
    12181 cgaaaaacct gcgttggaag acgtgttggc actggtcaaa gaccgcgccc aagatttgaa
    12241 cgccttggca gacgaatgcc tgtatttcta caaaaaacaa gtccctgccg aagccgatgt
    12301 tgccaaacac tgggacgacg aagccgccgc ccgtatgctg cgcttcgccg aacgcctcga
    12361 agggctggaa gactggaacg ccaaagccat tcacgacctc ttcaaacctt tctgcgacga
    12421 agaaggcatc aaaatgggca aactcggtat gcccctgcgc cttgctgtct gcggtacggc
    12481 aaaaaccccg agcgtcgatg ccgtgttggc attaatcagc aaagaggaag tgttgaaacg
    12541 catccgtgct taagttatcc acaggtgcgg gcaatgccgt ctgatgtcgg aatgcggctt
    12601 cagacggcat tcagacggca ttcagacgga agttgaacat gaaaaaaata ttgtattttc
    12661 tgatgtttgt tttttctaca agcgtatggg cagggggtgc ggaagacaat ttgctcagca
    12721 tccaatccgg ttaccgtgct ttactgcaaa agcaaaacaa tctggacgga aaaatcatcg
    12781 ggatgcagtc ggatttggaa gatgcgcgcc ggcgtttgca ggcggctcag gcagacatcg
    12841 cccgtttgga agcggaaatt cctgcagcaa tggcccaaaa agcccggcag gctgaagaga
    12901 tgaggcaaat cggagtgcgt ttggaccatg cttggaatgc ggtttacggc gcaggggaac
    12961 gaaagcgtcg ggggaattga ccgatgaatt ccctctttgt ggacaacact gtttttatta
    13021 cacggctgaa agccgggcat atcggcaggt tggttcaggc gttgtttgag gagtggcacg
    13081 gatttgaacc gtggtcttct gtggataaga ttcgtgccta ttacggcaga tgtttgaagg
    13141 atgacgaact gccgctggct tttgcggctg tggatgattc cggaaccctg ttgggttcgg
    13201 ctgcagtcaa gcggcatgat atggaaaatt ttccacagta tgaatattgg ttgggcgatg
    13261 tctttgtttt acctgaatat cgcggaaaag gcattggcag gaggctggtc gcccactgca
    13321 taggcgcagc gcgttcgctg gggataaagt tcttgtatct ttatacgcct gatgtgcaaa
    13381 tattttatga atcattcggc tgggcggttg tcgggcgaca tttccataac ggggaatggg
    13441 ttacggttat gcgtttggat gtggataagg tttaagccga atgggcagat gccgtctgag
    13501 ctgttcggac ggcatttttt atgtttggaa atttcctgtc agatatagtg gattaacaaa
    13561 aaccggtacg gcgttgcccc gccccggctc aaagggaacg gttccctaag gcgcccaagc
    13621 accgggcgaa ccggttccgt accatttgta ctgcccgcgg cccgccgcct tgtcctgatt
    13681 tttgttaatc cgccataaag tttatccaca gatttttcca tatggtttga tgctgctccg
    13741 ccaacggaaa ttaagatacg gatttgcaca aatctttcag acggtacagt tctgacaatg
    13801 cttcgcgcgg ggtcaggctg tcgggatcga ggttttccag ggctgctgcc aatatacctt
    13861 caaaatgttt ttcctctgct ttatccacaa agcagtccac attcggttca tctccttttt
    13921 cagacggcat ggtactgaaa atatccagtt ggggacggtt tgcggcggct tggttttcca
    13981 gtccgttcaa atgcttttgg gcggctttca atgcgcgcac aggcaggccg gcgagtttgg
    14041 cgacggcgat gccgtagctt tttccggcgg gaccgggttg gatttggtgc aggaacacga
    14101 tgtcccgtcc ctgttcgagc gcggaaaggt gcatattgac ggcggcggcg tgggcttcgg
    14161 gcaggtaggt cagctcgaaa tagtgggtgg caaacaggct gaaggatttg tttttttgca
    14221 gcaggtgttc ggcgattgcg tgcgcgaggg cgaggccgtc gaaagtggaa gtaccacgtc
    14281 cgacttcgtc cattaaaaca atgctttgtt cggtggcgtg atgcaggatg taggcggttt
    14341 cgctcatttc gaccatgaag gtggagcggt tggaggcgag gtcgtccgat gcgccgatgc
    14401 gggtgaagat ttgatcgaca ggcccgattg tggcggcatc ggcaggcacg aaacagccgg
    14461 tgtgtgccaa taaaacaatc agcgcgactt ggcgcatata ggtggatttg ccgcccatat
    14521 tggggccggt gagcagcatg aggcggtgtt tgtggtcgag gtcggtgtgg ttggctgtga
    14581 agtggcgtac ctgctgttcg acaacgggat ggcggccgtt ttcgatgtgg acaaccggat
    14641 agtcggcaaa ctcgggacgg acaaagttcc gctcttttgc caaggctgaa aatgtggata
    14701 acacgtccag cgcggcggcg gctttggcgg ctttttgaag ctgcggcaat gccgtccgaa
    14761 ggtttttcaa tacgccgtca aagagttgtt tttctaaggc gagggcttgg tcttgagcag
    14821 tcagcacttt gtcttcaaag gctttcagtt ccggcgtgat gaagcgttcg gcgtttttga
    14881 gggtttgccg gcgttggtag tcggcaggtg cttgttcggc ttgggttttg gacaattcaa
    14941 tgtaaaagcc gtgaacgcgg ttgaactcga ctttgagtgt ggacaaaccg gtacgttcgc
    15001 gttccttggc ttccaaatcc agcaaaaatt cgtcgccatg gttttgaatg cggcgcaatt
    15061 cgtccagttc gggatgaaaa ccgtggttga tgacattgcc gtctttcagc cagacggaag
    15121 gttcgggcat cacggcggct ttgagggttt cggcaactgg cagggtttcg gggaaaacgg
    15181 ctttaagggt ttccaacagg ctgctgccgg ttgcggacaa gtcgatttgt gccaactcga
    15241 acagactgtc gcgtaaagat gccaaatcgc gcgggcgggc attgccgacg gcgatgcggg
    15301 cggcgatacg ttcgatgtcg gcaatgctct tcagatggca ttggaggggt tcgtattggc
    15361 tttccagcgc ggttacggct tcttggcgcg ctcggatgtg ggcgcggttg cgtaaagggt
    15421 ggtgcagcca caatgccaac aggcggctgc ccatgtgggt ggcgcagccg tcgagtatgg
    15481 aaaacagggt cggcgttttt ttgccggaga gggtttgcgt gatttcgaga ttgcggcgcg
    15541 tggcggcatc catgccgata tattggctgt cggtttcgag cgacaggccg tccaaatgtt
    15601 gcggcatcag gttttgcgtc aggcggatat agttcaacag cgcacctgcc gcgccaatcg
    15661 aaacggcgtg ttctttgctg tccaaaccga agccgcgcaa atcttggcag ccgaaatatt
    15721 ccgtcagcag tttttccccc gcgtcggcgg caaactgcca cgcgttcagg cgtgtaacac
    15781 ccgatgccgt ctgaagttgc ggtgcgtttt tactgtccgg cagcaaaatt tccgccgcct
    15841 gcaggcgcgc cagttcgtcg ttcaatttat ccgcagttgt cagcttggtt ttgaattcgc
    15901 cgctttgcag cgatgcccac gccaaaccga tgtatttttt gtcgggagac acggcaacga
    15961 tgcggttggt ttccttgtct tccagtaatg cggaatcggt tagcgtgccg ggcgttacga
    16021 tgcgcacgac tttgcgctcc accggccctt tgcccgcgcc gacttcgccg acctgttcgc
    16081 aaatcgccac gcttttgccc aacttgacca ggcgcgccag atactgttcc gccgcgtgaa
    16141 acggaacgcc tgccatttta atcggcacgc cgtccatctg cccgcgtgtg gtcagggtga
    16201 tgtccaacaa tttcgccgct tccaccgcgt catccaaaaa cagctcgtaa aaatcaccca
    16261 tacggtaaaa cactagtttg tcggtatgtt gcgcttttat gccgaggtat tgctgcatca
    16321 ttggggaaac ggcggatttg gacatggggc tgccttatta ttaggaaaac ggtattgtag
    16381 caaaaggttt tgtcttcgac ggaatgagac tgaccgtaag cctgtcaata aagttgtgga
    16441 gacaaatagg aaaacggcaa agttatccat aagaatatta ttaagtcaaa aaacatccac
    16501 gcttatctgt cttatacggc aagccttaaa ctcaaattta tttaacaaaa aggtaatgaa
    16561 aatattggat atttgctact tatacacaag caggtcggca atcatcaaaa tcatcattaa
    16621 aattttaaaa tcaaatattg aatgcgcgtt tttgaaatag cgaaattcac ctgcgtcaaa
    16681 caaaacgcaa gtaattttat gtaatagtgg aatgtagttt tatttcagaa tacaatacag
    16741 gcatcggact ttatttcaca accgggagac aaaatatgag catcaaagta gcgattaacg
    16801 gtttcggccg catcggccgc ctcgcattgc gtcaaattga aaaagcccac ggcatcgaag
    16861 tcgccgccgt caacgacctg acccctgccg aaatgctgct gcaccttttc aaatacgaca
    16921 gcacacaagg ccgtttccaa ggtactgccg aattaaaaga cgatgccatc gtggtaaacg
    16981 gcagagaaat caaagttttc gccaatccga atcccgaaga attgccttgg ggcgagttgg
    17041 gtgtggatgt cgtcctcgaa tgtaccggtt tctttaccaa caaaaccaaa gccgaagcac
    17101 atatccgtgc cggcgcgcgc aaagtcgtga tttccgcacc cggcggcaat gatgtgaaaa
    17161 ccgtcgtata tggcgtaaac caagacatct tggacggtag cgaaactgtc atttccgccg
    17221 cttcctgtac caccaactgc cttgccccga tggcggcagt cctgcaaaaa gagttcggcg
    17281 tagtcgaagg cctgatgacc accatccacg cctacaccgg cgaccaaaac acccttgacg
    17341 cgccgcaccg caaaggcgat ttgcgccgcg cccgcgccgc cgcgctcaac atcgtgccca
    17401 acagcaccgg cgccgccaaa gccatcggtc tggttatccc cgaattgaac ggcaaactcg
    17461 acggctccgc ccaacgcgtc cctgttgcca ccggctcgct gaccgaattg gtttccgtcc
    17521 tcgaacgccc tgcaaccaaa gaagaaatca acgccgcgat gaaagccgcc tccagcgaat
    17581 cttacggcta caacgaagat caaatcgttt cttccgacgt tgtcggcatc gaatacggct
    17641 cgctctttga cgcaacccaa acccgcgtga tgaccgtggg cggcaaacaa ctggtgaaaa
    17701 ccgttgcctg gtacgacaac gaaatgtcct acacctgcca actcgtccgt actttggaat
    17761 acttcgcagg caaaatctaa ggcttgaaca aacctgtgga taagtaaatg ccgtctgaac
    17821 acattgcgtt cagacggcat tgtttatctg taacttgata ttgcggctta tggcgaacaa
    17881 acaacagccg tttgttcaac tgctatgcgg caaaaccgga ttttgcccga tttaaagcgg
    17941 ggttggggaa agattaataa ccgtcgcgcg gttttcctcg atttgaaacc tgacttcgta
    18001 atccgcaata ttcatcacat aaatccgttc gggaatattc tgataggcgg ggcgcggatc
    18061 ttgggcaatg ctttggctga tgaggttttt ggtgtttgca gataaatttt ccgcgccgat
    18121 gttttcctgc caaacgactt ccaactctac gggtttgccg ctgacgaaac cggatgcggc
    18181 atcgggtttg gattcgataa aggggatata aggcttgatg tccacaatcg gcgtgccgtc
    18241 cagcaggtct gagccgctgc aatagaggcg gacgggtttg ccggtttcga tgcgttcgag
    18301 tttaaggaga gagagtccga gatggttggg gcggtggggg ctgcgcgtgg cgaacacgcc
    18361 cattttttgt ttgccgccga gccgtggcgg gcgcaccatt tgcgcccaac cttcatccaa
    18421 tacgccgtgg aagataaaac ttatccacac ataatcgaaa tcttccaacc cgcgcacgct
    18481 gtctgcggta aattcgggat tcagctcgat gcaggcttct gcggcggaga ccaaaccggg
    18541 ctggcgggcg atgccgaatt tctgtttgta gggcgagcgg gcggtgccga tgggggtaat
    18601 ggtataagtc ataagattgt ggataagttt tttggaaaaa ccttatctta tcacagccgg
    18661 ttttaccgct ttcgggtagt aatttgttat aatacagggc atttaaatcg cgttgaaata
    18721 aagtagcaca gaatcctcgt gtccaagacg ctcttaaaaa ggcattggag tattgataaa
    18781 aaagaagcat aacggttcgt tataacgaag agggaatccc gtatattaca cccaagtcag
    18841 gttgttatct ttccttttgg atctcactta caggaggtga gatctgaaat tttgggtaat
    18901 aaaatcggat tacagcttct agcaaggagt accttaggta tagctaaaat ggagggggtg
    18961 gatatgacat atcatatcca cctagatgga ttgtactcct taaataaaga aggtaagagt
    19021 tttgttattc gtaaaataga gaatgacgat cttaaatgaa gaagtaatga gatgattgtt
    19081 tccattgatg ttgatgcaca aaaaactttt acgcctttgt gtcctgacga actgcccgtg
    19141 aacgaggggc atttgattgt cgaggagtta aatgcccaag ccgctttggc ggatttgcgt
    19201 gtgatgacga aagatgcgca tcatatggcg gcgaaatggc ttgtggataa ccctgttgat
    19261 atgttgaagc cgacaggttt gtccgatgcg gatttgactt gggtggctca tgcgatggtc
    19321 ggtacgcgcg gctatgaatt gttggacggt ctgccttccg ccaaggaata cgattattgc
    19381 gtttggaaag gtgtcgatcc cgaattgcat ccttacggcg cgtgttttca cgatattgag
    19441 gaaaaactga gcactggatt gattgagtgg ctgcgttgtc aaaatacgaa tatggtcatt
    19501 gtcggcggct tggctacgga ttattgtgtt aaaacaacgg ttttgcagtt acttaaaggc
    19561 ggtcgttggc aggttatcgt gaatgaagcg gcttgtcggg gtattgcgcc cgataccatt
    19621 gaagcagcgt ggcaggaaat gcgttcttcg ggtgcgataa ttttgaaaaa cgccgaaaaa
    19681 attaaaaaat atattaataa tcaataactt ataattgttt cacgtgaaac accctgtcta
    19741 tatatgaaaa ttttgcttgt ccgtttgtcc agtatgggtg atttaattca cactttgccc
    19801 gcaatcgaag atttggcgcg acaatgctct gatgtagaac tgcattggct atgtgaagcc
    19861 gggtttgcgg gtattgcacg gttgcatccg tttgtaaaaa aggtccatgt aatgaagtgg
    19921 cggcaatggc gcaaacatct ctttcaggct gaaacttggc gggagatggg tcgtctgaaa
    19981 caggctttgc tgcaggaagc atttgatttt gtattggaca gtcagggtct gattaaaagc
    20041 gcgtgtttcg ccaaaatggc aaaatcccct atttatggtt tggataaaca cagtgcgcgt
    20101 gagggggtgg ctgctttggc gtatgataaa aagtatgtcg taccgaaagg tagaaatgcc
    20161 gtttggcgca accgtgatct gtttgcccag gtgtttgggt atgcaatgcc tgagacgcag
    20221 gtatttggtt tgtccgttcc tgaagcaagc cgtctgaaaa atttagcgca gccgtattat
    20281 gcggctttgc acgcgaccag tcgggacagt aagttatggc ctatggaaaa ttggcgggag
    20341 ttgctgcaga aactgaatca aaaacaacaa tgcaatgttt atctgccttg gggaaacgag
    20401 gctgaaaaag tgcgtgcgga acagattgca gacgggctgc cgtttaccat agtgtgcgct
    20461 aaaatgaatt tattacaggc ggcgtatctg ttgaaacacg cggttggaat agttggtgta
    20521 gataccggtt tgctgcattt ggcaaatgcc ttggaaaaac ctgtggtcgg catttatacc
    20581 gataccgatc cgattaaaac aggcgttcaa gtttcggcta ttgcaaaaaa tgtgggcaat
    20641 atcgggcaga ttccgaccgc agatttggtt tatcaaacgc tgatggattg tgtttcagca
    20701 gataaaggct aaagggtcgt ctaaaactga tatggcggca tgatattttc caatttatta
    20761 gatacaggaa tgtatatccg ccagcctgag taaatacttt aaaaatggta taatcggtaa
    20821 aattatccga aagattgcta aataaattcg tttttaagga aaacggattt gattttataa
    20881 agaagaaggt ttggtttcgc tggatggtga aagcagcgtt ctttttagga gaattcaatg
    20941 aaagcactgg tcgcagtaaa gcgcgtagtg gactacaacg tcaaagtccg tgtgaaagcc
    21001 gatggttcgg atgtggacat cggcaatgtc aaaatgtcga tgaacccgtt tgatgaaatc
    21061 gctgtggaag aagccgtccg tttgaaagaa gccgggaaag taagcgaaat tgtagcggtt
    21121 tctttgggtg aaaagaaatg cgaagaaacc ttgcgtaccg ctttggcaat gggtgccgac
    21181 cgtgccattc atattgaaac cgatgtgaaa ttagagccgc tggcagttgc caaactgctg
    21241 aaagctgttg cggacaaaga aaatccgcaa attttctttt tgggcaaaca agcgattgat
    21301 gacgatgcca atcaagtggc gcaaatgctg gcagctttgt tgaatgcggc gcaaggtaca
    21361 tttgtttcaa aagtacaaat tgaaggtgat gaagtacaga ttgtgcgcga aattgatggc
    21421 ggcgaagaaa cgattgcgtt gaaactgcct gcagtcatca gcgcagattt gcgtttgaac
    21481 gagccgcgct ttgtcaaact ccccaatatt atggcggcaa agaaaaaacc tctggaaaaa
    21541 ctggattctg ccgatttggc taccgatatt tcgcctcgtc tgaaaacggt gaaatttgcc
    21601 gaacctaagg cgcgtcaggc aggcgtaaaa gtagcaagcg ttgccgaatt ggttgaaaaa
    21661 ttgaaaaacg aagccaaagt gatttgagga ggctgaaatg agcgtattga ttattgccga
    21721 acacgacaac aaacagttga atcctgccac tttgcatgct gttgccgctg ccgccaaact
    21781 gggcaaggtc gatttattgg ttgtcggaaa cggcgcatcg tccgtcgtgg aattcgcgaa
    21841 gcaagtagcg ggagtggaaa aagttttggt tgcagatgct gctcattatg ctgaaggttt
    21901 ggctgaagag ttggctccgc tggttgtcaa attggcggcg gattaccgct atgttgcagc
    21961 aacggcaacc acattcggta aaaacctttt gccccgcgta gccgccttat tagacgtacc
    22021 gcaaatttct gatttgaccg agattgtaga taacacgact tttgtacgtc cgatttatgc
    22081 aggtaatgca tttgaaaccg tgcaagccga ttcagaaaaa ttggtgctga ccttccgtgt
    22141 gacggctttt gacgcagtgg cggcgcaagg tggtaatgct gaggtaatta atgttaaaac
    22201 aacccctgcc caaaacctga gtcgttttgt taaccgtcaa ctttcccatt ccgatcgtcc
    22261 cgaactgact caggcaaaag tgattgtttc cggtggtcgt gcgttgggta gtgtggaaaa
    22321 attcagtgaa gtgctgacac cgttggcgga tgttttaggt gcggcaatcg gtgcatcccg
    22381 tgcggcggtt gatgccgagt atgcaccaaa cgatgctcaa gtcggacaaa ccggtaaggt
    22441 ggttgcgccg cagctctatt ttgcaatcgg tatttcaggt gcgattcaac acgttgccgg
    22501 tatgcaggac agtaaggtga ttgttgcaat caacaaagat gccgatgcgc cgattttcaa
    22561 tgtagccgat tacggattgg ttggcgattt atttgaaatt gttccacaat taatagaatt
    22621 attgaaaaat tgatgtttca cgtgaaactt tcaggcgact ttgttattaa tgaggtcgtc
    22681 taaaaacatt tcagcatgat tacgacttat aaaaccatta cttccccgac gcaggctgag
    22741 tttaaagata aaggcagccg ttttattgca tttgcctatc cgattcggac attggctgat
    22801 gtgaaaaaat acctcaatct gttaaaggaa gagcattata aagcgcggca ttggtgctat
    22861 gcctatcgtt taggtgtgaa cgggatgcag tttcgcggca acgatgatgg agagccacca
    22921 ggaagtgctg ggcggccaat tttgggacag attgattcgg tgggtatcac tgatgttttg
    22981 gtcgtggtcg tccgctattt cggtggtgct ttattgggcg ttcccggctt gattcacgca
    23041 tacaaagagg caacggctca ggcgttggcg atcgcggaag tggttgaaaa gaatattgaa
    23101 aaaaccgttt ggctgaaatg tgagtatccg tttttgaatg aagcaatatg cattgccaaa
    23161 caatatcagg cggatatatt ggagcaggat ttgcagttgg attgccgatt gacggtaagt
    23221 ttgtcgttgg caaattatga ggcctgtgtt gcggcttgga agaatacacg gcaggttgaa
    23281 gtaaatacgg aaaagccttt tgaatgaaag gttgtatgaa atgctttgta atggtatttc
    23341 aggcaacctc ttcgctgatt aattttcttg tgtatatctg tctaaggtat cgacgctgga
    23401 gcataaatat agccaagcca attgatggaa ttcgcccggc gcgttccata atgcatcttc
    23461 actcataatg ctatattcgc cttctgtttg caaattcagt tctaccccgt cttcaatagt
    23521 ctgatggcgc acctgatact cgtgggtata gaaattgtcc atatcgcgaa ttaaagcgac
    23581 ggcatatttc caacggcgga tgttttcttc cagttgcagt agtaaatgac accattcgcg
    23641 gtatttgctt tggatttcat caatacgttt ttgcgtgttt gcttgttatt ttttaatttg
    23701 tgaataagtt gaataggttg cagagtggaa tgaagtggtc ttttgtttga ttctactaaa
    23761 atttcttcag atgggacaaa agttcctttg tatcgagttt tcgttaaaag tacatatttg
    23821 tcaaggagat ggcatgaaac tgctggttat cggtaatggc ggtcgcgaac acgcgctggc
    23881 ttggaagttg gcgcagtcgc ccaaagtgga aacagtattt gttgcgcccg gtaatgccgg
    23941 tacggcgatt gaatccaagc tccaaaacat tgccttgacc gcgtatcagg atttgattga
    24001 attctgccgt aaagaaaata ttgtttttac cgtcgtcggc cctgaagcgc ctttggcggc
    24061 aggtattgtg gatgattttc gtgccgcagg gctgaaaata tttggtccga cacaatatgc
    24121 ggcgcagttg gaaagttcta aagatttcgc caaagcattt atggtgaaat acaatattcc
    24181 gaccgcgcaa taccaaacct ttgaaaatgc cgatgccgca catgattacg tcaatcagaa
    24241 aggtgcgcct atcgttatca aagccgatgg tttggtggca ggtaaaggcg tgattgtggc
    24301 aatgactttg gatgaagcgc atgctgcgat tgacgatatg ttgttgggca ataaaatggg
    24361 caatgccggc gaacgcgttg tgattgaaga ttttctgcaa ggcgaagaag cgagctttat
    24421 cgttatggtt gatggcaatc atgtattacc tatggcgacc agtcgagacc acaaacgtct
    24481 tttagacgga gataaaggcc cgaatacggg cggtatgggt gcgtacagtc ccgcgcctgt
    24541 ggtaacgcct gctgtgtacg agcgtgcgat gaacgagatt attttgccga ccgtagcggg
    24601 tatgaaagcg gaggggcacg agttcaccgg ctttttgtac gcaggtttga tgatcgatca
    24661 aagcggtgca ccctatacga ttgagtttaa ctgccgtttc ggcgatcccg aaacccagcc
    24721 gattatgagc cgtctaaaca gcgatttggc ggatttggtt gaagcggcaa tagacggcag
    24781 actggacagc gtcaaagcgg aatggaatcc gcaaactgcc gtgggtgtgg tactggcggc
    24841 gcaaaattac cccgaaacac ccaagaaagg cgatgttatt tccggtttgg atgacgtcaa
    24901 ccgaatcggc aaagtattcc atgccggcac aacggtaaac gagaaaggcg acgtgttgac
    24961 caacggcggg cgcatattgt gtgttgtagg attgggcgac gatgtggcgc aagcgaaagc
    25021 caaggcgtat ggcgcgttgg aaaaaatcag cttcgacggg atgcaatacc gtaaagacat
    25081 tgccgataaa gcgattaacc gttaattaga aagaggatga tgccgtctga agccaagtat
    25141 gactgatgcg cttcagacgg cattttatat tatgttattt tcgagaatta tcgcagcatc
    25201 agcgcaacgt aagttaagcg tttatttgaa aaaaggcggt ttggttgctt atccgaccga
    25261 atcttgttat ggcttggggt gtcttccgac attagccaaa gcactcggta agttggcgca
    25321 tttgaaaaaa aggccgcaac acaagggtat gattgtcatc gggaatcaac ttgaacaatt
    25381 gcagccttta cttcaaatgc cgtttgaaaa cattcaaacc atgcttagaa acgaatggcc
    25441 tgctcctaag actttcctat tgttggctaa atctggcgta ttacctgcgt tgcgcgggaa
    25501 gaggcgcagc aagcttgcgg tcagagtgcc cgatcataca ggtgcaaggc gtttgtgtca
    25561 ggcattgggt atgcctttgg tttccacttc atgtaatcgg gcgggtaaac gcgcgtgtcg
    25621 gacggagagg gaagtcagaa ggcagttcgg acgcgatgtg tggattgtcg gtgggagaat
    25681 cggcaggcag aaatcgccga gtcagattat cgatggggaa acaggtaaac gtttgcgtta
    25741 gatatggatg cttgagtgaa aacttttttg catacacaaa gaaaaaattt tttggatggt
    25801 atttctctac atgattgtta tcgcacggcg ataaaggtag aaggacgcaa cgtctgcttt
    25861 gattttgagg acggttttgt cgttctggac aataatccga acaatcaagc gggcaagcat
    25921 ctgaaaacag atttttcccg tgttgtttta acccatgaaa atagaaacgc cgaagacgac
    25981 tatttggtcg atatttttga agacatcgtc tttttaggga aacgtttgtt tacagtcaga
    26041 aaatttcttg atttttctga attgcttgaa atgatcaatg cacaaggcta ttttcttgaa
    26101 tttctgtatc tgtatgaatg tatcggtgtc aaaacaagcg attatttttt agaggctgtg
    26161 ttggttacgg gacggagccg ggaatgtaaa aaatgcttta tcaaaattat gagggcaagc
    26221 agttttgtgt atcaatggaa caatttacgt ttgaatagtg agattgtata gcgggtttat
    26281 atttcggatg gaagccggtt taaaaaaata atgtggataa tttcagggaa tggcaaaatg
    26341 tcgtctgaaa tgctgatatt tcagtattcc agacggcatt tttataataa ggcttatgga
    26401 taaatttgtg tataagttga aatcagagtt ttttcccgca tacggtttca tattgttttt
    26461 cagttaatgt cccggacagg atgctcatcg ggcggaggga agaggctgtg tagttttgtg
    26521 tggaaatttc cgtgtttttt gtatcaaata actgtagcga acttaagcgg tatgttttgt
    26581 tgttgcagtg gatttcccac tcggcaatgg cagtcttgta tgcgggggtg ttggcaaaac
    26641 gttcttgttt cagattggta acaacttttt tatcttggaa aatcatcaga tttccgtttt
    26701 ttctcacact gtctttatta atatatgtat gaatattgcc gtttgagatt gtgccgatat
    26761 tttcccatcg ggcagacttg tccggtgtgc tgcaggcggt tatcaaaata gggagtaaaa
//
LOCUS       DAXGCP010000020        24592 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.020, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000020 DAXGCP010000000
VERSION     DAXGCP010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24592
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.020"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(432..517)
                     /locus_tag="ACFJCW_000731"
     tRNA            complement(432..517)
                     /locus_tag="ACFJCW_000731"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(481..483),aa:Leu,seq:gag)
     gene            complement(531..881)
                     /gene="secG"
                     /locus_tag="ACFJCW_000732"
     CDS             complement(531..881)
                     /gene="secG"
                     /locus_tag="ACFJCW_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HFC4150933.1"
                     /translation="MEAFKTLIWIINIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNIRQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            complement(888..1661)
                     /gene="tpiA"
                     /locus_tag="ACFJCW_000733"
     CDS             complement(888..1661)
                     /gene="tpiA"
                     /locus_tag="ACFJCW_000733"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HFC4150934.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEERETGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            1820..2347
                     /locus_tag="ACFJCW_000734"
     CDS             1820..2347
                     /locus_tag="ACFJCW_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HFC4150935.1"
                     /translation="MYANMGDMMHALHFSASDKAALYREVLPQIESVVADEADWVANL
                     ANTAAVLKEAFGWLWVGFYFVDTRSDELVLAPFQGPLACTRIPFGRGVCGQAWAKGET
                     VVVKDVNAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDEADALYLGEL
                     AKILERRFEASSQAA"
     gene            2450..3106
                     /locus_tag="ACFJCW_000735"
     CDS             2450..3106
                     /locus_tag="ACFJCW_000735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HFC4150936.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALGEIPRELFADESLQG
                     LAYADMELPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAERQKRAKAVLDGLSLENIDYVQNNGLTELSAGAPFDAVYVGGAVTLVPEVL
                     KEQLKDGGRMAVIVGRRPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDAHPFDSFNF
                     "
     gene            3187..3510
                     /locus_tag="ACFJCW_000736"
     CDS             3187..3510
                     /locus_tag="ACFJCW_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HFC4150937.1"
                     /translation="MDIVQLPSAALKAWMDEGRMFCLLDVRTDEEAAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLAEAGFENLYNLQGGIDAWAVEVDA
                     EMARY"
     gene            complement(3773..5950)
                     /gene="tdfF"
                     /locus_tag="ACFJCW_000737"
     CDS             complement(3773..5950)
                     /gene="tdfF"
                     /locus_tag="ACFJCW_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HFC4150938.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPFGLPMTLREIPQSVSVITSQQMRDQNIKTLDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     PDGTGEPSATVNLVRKHPTRKPLFEVRAEAGNRKHFGLGADVSGSLNAEGTLRGRLVS
                     TFGRGDSWRQLERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWSNSRNRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHSTAATDLIPGYWHADPRTHSASMSLTGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYDTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRAGSYNSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQLQ
                     KDEHGSYLKPVTGNNLEADIKGEWLEGRLNASAAVYRARKNNLATAAGRDQSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKPRDQDGSRLNPDSVPERSFKLFTAYH
                     LAPEAPSGRTIGAGVRRQGETHTDPAALHIPNPAAKARAVANSRQKAYAVADIMARYR
                     FNPRTELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
     gene            complement(6213..6536)
                     /locus_tag="ACFJCW_000738"
     CDS             complement(6213..6536)
                     /locus_tag="ACFJCW_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HFC4150939.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGNMTIREGEMAVVPKSVSHRPRSENGCSVVLIDLPD
                     PSEAA"
     gene            complement(6569..7540)
                     /locus_tag="ACFJCW_000739"
     CDS             complement(6569..7540)
                     /locus_tag="ACFJCW_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4150940.1"
                     /translation="MKPRFYWAACAVLPAACSPEPAAEKTVSAASQAASTPVATLTVP
                     TARGDAVVPKNPERVAVYDWAALDTLTEPGVNVGATTAPVRVDYLQPAFDKAATVGTL
                     FEPDCESLHRHNPQFVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLSR
                     IFGKEARVAELNAQIDALFAQKREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGD
                     IGLPPVDESLRNEGHGQPVSFEYIKEKNPGWIFIIDRTAAIGQEGPAAVEVLDNALVC
                     GTNAWKRKQIIVMPAANYIVAGGARQLIQAAEQLKAAFEKAEPVAAQ"
     gene            7776..8732
                     /locus_tag="ACFJCW_000740"
     CDS             7776..8732
                     /locus_tag="ACFJCW_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC4150941.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLKM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDSGGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAGTLTAAACPLLQRPFESDGFGLLADEADALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILNSEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGRLRRLRLEHAL
                     ALIKSGSTIQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            complement(8845..10860)
                     /locus_tag="ACFJCW_000741"
     CDS             complement(8845..10860)
                     /locus_tag="ACFJCW_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HFC4150942.1"
                     /translation="MKSYPDPYRHFENLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILNQMQDTRQIPFCQEHRARMYHFHQNAEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLNKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPAYQIDKGAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSEGGAKPLNLPNDCDVVGYLAGHLLL
                     TLRKDWHRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADSKWQEAELPHLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRLQPQQFVSDGIEVRQFWAVSSDGERIPYFHVGKNAAPDTPTLVYAYG
                     GFGIPELPHYLGSVGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPKHIGLQGGSNGGLITAAAFVREPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEACKRRLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLRETSPQSWLYSPDGGGHTGNGTQRESADKLACVLLFLKEFLG"
     gene            complement(10956..12266)
                     /gene="argA"
                     /locus_tag="ACFJCW_000742"
     CDS             complement(10956..12266)
                     /gene="argA"
                     /locus_tag="ACFJCW_000742"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HFC4150943.1"
                     /translation="MNAPDSFVAHFREAAPYIRQMRGTTLVAGIDGRLLEGGTLNKLA
                     ADIGLLSQLGIRLVLIHGAYHFLDRLAAAQGRTPHYCRGLRVTDETSLGQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWMPPLGHSYGGKTFNLDMVQAAASVAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARGIGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKDYRSNGRNSHILVRRLHR"
     gene            complement(12263..12691)
                     /locus_tag="ACFJCW_000743"
     CDS             complement(12263..12691)
                     /locus_tag="ACFJCW_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HFC4150944.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTHAISKKQISRDEIADILNGGTTLHDTPPATAAAA
                     PAAAPQVSVPPARQEGLNWTIATLFALIVLIMQLSYLFIL"
     gene            complement(12765..13406)
                     /gene="pyrE"
                     /locus_tag="ACFJCW_000744"
     CDS             complement(12765..13406)
                     /gene="pyrE"
                     /locus_tag="ACFJCW_000744"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HFC4150945.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGA
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DRGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRTYRRQYGVE"
     gene            complement(13468..14205)
                     /locus_tag="ACFJCW_000745"
     CDS             complement(13468..14205)
                     /locus_tag="ACFJCW_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HFC4150946.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARRQTV
                     RAATIRPSQPHNVQARLETMKALETAAVHTRKPAPETETPPPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGILLDNILKAAGLDAAYVHKTCWVKTAAVGNPMP
                     SEQAVADALGQIAGELDGCRAPAVLFLGQAFVNLERQAMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKRALRQGGGS"
     gene            complement(14199..14639)
                     /gene="rimI"
                     /locus_tag="ACFJCW_000746"
     CDS             complement(14199..14639)
                     /gene="rimI"
                     /locus_tag="ACFJCW_000746"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HFC4150947.1"
                     /translation="MNIRPALPSDCAALAALDTVCNPSAWTQRQFESALVSPSEQVFL
                     AEKDGRIAAFIVWQNLPDESELHLIATAPECRRRGVASALLEYWYAHLPEGTQRLLLE
                     VRAGNAAAQALYTKHGFSIAGRRKNYYCTADGQTEDAVLMEKIC"
     gene            complement(14636..15313)
                     /gene="tsaB"
                     /locus_tag="ACFJCW_000747"
     CDS             complement(14636..15313)
                     /gene="tsaB"
                     /locus_tag="ACFJCW_000747"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HFC4150948.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGEIRLFHQEVGIRQSELI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIALPEGYVFSDG
                     IGSAFALENRPPFSGKPDMPTAADFLALALGGGYPATGAAHAELLYVRNKIALTAKEQ
                     AERKART"
     gene            complement(15452..16309)
                     /locus_tag="ACFJCW_000748"
     CDS             complement(15452..16309)
                     /locus_tag="ACFJCW_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HFC4150949.1"
                     /translation="MTRSKPVNRTTFCCLSLTAGPDSDRLQQRRGGGGGVAADIGTGL
                     ADALTAPLDHKDKGLKSLTLEASIPQNGTLTLSAQGAEKTFKAGGKDNSLNTGKLKND
                     KISRFDFVQKIEVDGQTITLASGEFQIYKQDHSAVVALRIEKINNPDKIDSLINQRSF
                     LVSDLGGEHTAFNQLPDGKAEYHGKAFSSDDAGGKLTYTIDFAAKQGHGKIEHLKTPE
                     QNVELASAELKADEKSHAVILGDTRYGGEEKGTYRLALFGDRAQEIAGSATVKIGEKV
                     HEIGIADKQ"
     gene            complement(16448..17512)
                     /gene="fba"
                     /locus_tag="ACFJCW_000749"
     CDS             complement(16448..17512)
                     /gene="fba"
                     /locus_tag="ACFJCW_000749"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HFC4150950.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLLEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAAGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLGKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMASRYAKGELNQIVK"
     gene            17706..18623
                     /gene="xerC"
                     /locus_tag="ACFJCW_000750"
     CDS             17706..18623
                     /gene="xerC"
                     /locus_tag="ACFJCW_000750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HFC4150951.1"
                     /translation="MVLDGFAAYFDAYLENIVREGKSEHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQDLSRRDFTAALRRLSQRGLDGRTLARKLSAWRQYCAWLVKRGLMRADP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLTGKSVEALKNYLPLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLESWAAQYGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            18708..20621
                     /gene="dxs"
                     /locus_tag="ACFJCW_000751"
     CDS             18708..20621
                     /gene="dxs"
                     /locus_tag="ACFJCW_000751"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HFC4150952.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGGDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKEGGAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCVPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGEKTAFIAFGSMVATALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTEHGDPKKLLDDLGLSAEAVER
                     RVREWLPDRDAAN"
     gene            complement(20686..20850)
                     /locus_tag="ACFJCW_000752"
     CDS             complement(20686..20850)
                     /locus_tag="ACFJCW_000752"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150953.1"
                     /translation="MPPEAFQTAFCLVSADGTAAVIRTSGINFQTRNGTPSTARKPPP
                     EPFLPPAGFQ"
     gene            complement(20868..22196)
                     /gene="miaB"
                     /locus_tag="ACFJCW_000753"
     CDS             complement(20868..22196)
                     /gene="miaB"
                     /locus_tag="ACFJCW_000753"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HFC4150954.1"
                     /translation="MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIVEA"
     gene            22393..22467
                     /locus_tag="ACFJCW_000754"
                     /pseudo
     CDS             22393..22467
                     /locus_tag="ACFJCW_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
     gene            22521..22904
                     /locus_tag="ACFJCW_000755"
     CDS             22521..22904
                     /locus_tag="ACFJCW_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HFC4150955.1"
                     /translation="MYCLRLRRLVLIFVNPLYQTEEGIAQTVVKGKTTRAEVEARFGK
                     RNPFGCYAYHEVSLPIYNFLPTNFIYMKSERRHWEWCADYDGEGVVRDYRFTHKVEKD
                     ERSVIRDTVGVIRKEAGKSLSQPEK"
     gene            22968..24248
                     /gene="hemL"
                     /locus_tag="ACFJCW_000756"
     CDS             22968..24248
                     /gene="hemL"
                     /locus_tag="ACFJCW_000756"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HFC4150956.1"
                     /translation="MNRNEILFDRAKAVIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAEI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGDEIACVIVEPFVGNMNLVRPTEA
                     FVKALRGLTEKHGAVLIYDEVMTGFRVALGGAQSLHGITPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIQREGFYENLTALTQRLANG
                     IAAAKAHGIEFAADSVGGMFGLYFAAHVPRNYADMARSNIDAFKRFFHGMLDRGIAFG
                     PSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(24472..>24592)
                     /locus_tag="ACFJCW_000757"
     CDS             complement(24472..>24592)
                     /locus_tag="ACFJCW_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC4150957.1"
                     /translation="SPEPNPIEKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         4757 a         6429 c         7674 g         5732 t
ORIGIN      
        1 cttgtcccga tttaaattta attcactata tttcatatac ttatttatct aacttttccc
       61 cggtaacaag gtaacaacta agggtatcgc ttcctagtat aggttttttc caaaaaccca
      121 aaaaaaccgc tctgcatctt ggacggtttc cccctcgttc cctacggttc gtcagtattc
      181 cccgcaagct cttttccgct tggcattcct gatttggtgg tcgttcagct ttatttttgc
      241 ggtatttttc ggataccgta aaaaatcagg ttagttcaat tagggcggat tggacgggat
      301 tgcacagtca ggaaggggac ggcaggataa caatcagcct gaaatccttg tattgattgg
      361 gattggttga tggcatcaga caggattaaa cgaaaaaaaa acgcctagaa tttctaagcg
      421 tttttgtgtg ttggtgccga cagcgagatt tgaactcgca cagcctacgg ccactacccc
      481 ctcaagatag cgtgtctacc aatttcacca tgtcggcatt tgaaaaactg ttatttctgc
      541 tgctgaggaa caggggcaga aggttcggta ttgcttacgg gtttgggtgc ttgctgagtc
      601 tgtcgtatgt tgctgaagtc caaaccgtgt tttgtcgtgt gggtgtgaat atacaccata
      661 gccatgcagg ttgcgaagaa aaatgttgct gcaacggcgg tcgagcggct gaggaagttg
      721 gcgttgccgg cagagccgaa tacgccttgc gcgctgccgc ttcccgatcc gaaggtcgcg
      781 ccggcatccg cgcctttgcc gtgttggagc aatactaaca cgatgacggc caaagcggaa
      841 ataatattaa taatccaaat tagggttttg aaggcttcca tatttttcta cgcattttgt
      901 gcggcactga tgatggcggt aaaggagtcg tacgacaatg acgcgccgcc gacgagtgcg
      961 ccgtccacat aaggtactgc gaagatgtcg gccgcgttgt ccgctttcac acttccgccg
     1021 taaaggacgc ggattttaac atcgcttccg cacaaagaca agatttcttt gtagatgaat
     1081 gcgtgcatat cggcaatctg ttcgacggtg gcgactttgc ctgtgccgat tgcccagacg
     1141 ggttcgtagg cgacggcgat gtttttggta tccagccctt gcaggatgga aagctgatgg
     1201 gcgatgactt cgtgttcttt gccggtttcg cgctcttcga ggctttcgcc gacgcacaat
     1261 aatgggatga gtccgacgtt gaggacgttt tccattttgc ggcgttggat ttcgtttttt
     1321 tcgccgaaat aaaggctgcg ttcggagtgt ccgatgagga cgatgtctgt gccggtgtcg
     1381 gcgagcattt cggcggacac ttcgccggtg tacgcgccgt tgtcggggaa gcggctcacg
     1441 tcttgggcgc aggtgaggat gcggttgttt aagacgattt gcatggcgtt gtgcagttgc
     1501 agcaggtaaa cggtcggggc ggcgagtccg atgaggacgc gttcggcggt ggggaggatg
     1561 cggaagcggt gcatcagtgc gttgttgttt tggagccggc cgttcatttt ccagttgccg
     1621 atgacccatt tttgatccca cattccgatt tggcgataca tcttttttgc tccgtgtcgt
     1681 gtttttctgt ctgccgcgtg tggcgcgttg caatgtgaag tttagtggat atgcggcggg
     1741 ttcgcaactt ggggcgggcg gctgcggggg cggtttggaa tgttgtttcg ggcaggatgt
     1801 tttataatgg ctgcctgata tgtatgcaaa tatgggagat atgatgcacg cgcttcattt
     1861 ttcggcttcg gacaaggccg cgctttatcg tgaggtgttg ccgcagattg agtctgtggt
     1921 ggcggacgag gcggattggg tggcgaattt ggcgaacacg gcggcggttt tgaaggaggc
     1981 gttcggctgg ttgtgggtgg gtttttattt tgtcgatacg cgttcggacg aattggtttt
     2041 ggcaccgttt cagggacctt tggcgtgtac gcggattccg ttcgggcgcg gggtgtgcgg
     2101 tcaggcttgg gcgaagggtg aaacggtggt tgttaaggat gtgaacgcgc atcccgacca
     2161 tattgcctgt tcgtctttgt cgcgttcgga gattgtcgtg ccgctgtttt cagacggccg
     2221 ctgtatcggc gtgttggacg cggacagcga acatttggcg cagtttgatg aggcagatgc
     2281 tttgtatttg ggcgaactgg cgaagatttt ggagaggcgg tttgaggctt cgagtcaggc
     2341 ggcttgagac tggcaaaacg ggcgggcttc gcgtgccgaa gttggcgcgg cggtagtgtg
     2401 gttttataat gcctgccatt gataaaacaa ttatttgacg gagcactaaa tggattttga
     2461 aaaagcgcgg ttcaatatgg tcgaacagca gatccgtcct tgggatgtat tggattttga
     2521 cgtgttggac gctttggggg agattccgcg cgagcttttc gcggatgagt ctttgcaggg
     2581 tttggcgtat gcggatatgg agctgccgct tgccaacggt cataagatgc tcgagccgaa
     2641 agtcgtggcg cggctggcgc agggcttgaa gctgacgaaa aacgatacgg ttttggaaat
     2701 cggcacgggt tcgggctatg cgacggctct gttggcaaaa ctggctggcc gtgtggtttc
     2761 ggacgacatc gatgccgaac ggcaaaagcg cgccaaagcg gttttggacg gcttgtcttt
     2821 ggaaaacatc gattatgtgc aaaataacgg gttgaccgaa ctttccgcag gtgcgccgtt
     2881 tgatgcggtt tacgtcggcg gcgcggtaac ccttgtgcct gaagtgttaa aggaacagtt
     2941 gaaggacggc gggcgtatgg cggttattgt gggacgcagg ccggtgcagc gcgcgctttt
     3001 gattacgcgc aggggcgatg tgtttgaaga gaaggtgctg ttcgatactt tggtggcgca
     3061 tttggacgac aaggatgccc atcctttcga cagttttaat ttttgatgtt cggattgtga
     3121 tgccgtctga aagcgggttt ggggcttcag acggcatttt gcttggtttt tttcgggggg
     3181 tttgtgatgg atattgtgca acttccgtcg gcggcattga aggcgtggat ggacgaaggg
     3241 cggatgtttt gtttgttgga cgtgcgtacg gatgaagaag cggcggtttg ttcgctgcca
     3301 aatgcgctgc atatcccgat gaatctgatt ccgctgcggc aaaacgagtt gccggacgat
     3361 gtgccgcttg tggtgtattg ccatcacggt atccgcagcc tgcatacggc gatgtatttg
     3421 gcggaggcgg gttttgaaaa cctgtacaac cttcagggcg gcatcgacgc gtgggcggtt
     3481 gaggttgacg cggaaatggc gcggtattga aggcggcttc agacggcatt ccttaaatgc
     3541 gtgtacctct ggtgttccat aaaggtcgtc tgaaagtgca gcttctgcga agctaaagcg
     3601 cagtatcaac gaagttaaaa tttgcctgaa ccttaaaggc agcctgcacc ccaattccct
     3661 cgccccgtgg gagaaggcta gggagagggc ggcaaactgc aggtttgctt gggcggcatt
     3721 ttcaatgtgc aggctgcttt tagcttcgca gaaactccgt tttcagacga ccttatttaa
     3781 accgataggt aaacgccgcg ttcactgtcc gcagtgcgcc gtagctgtgg cggtcgggct
     3841 gggtgcggta gtgtttgttg aacaggttgt ccacgttcag cgacagttcg gtgcgcggat
     3901 tgaagcggta acgcgccatg atgtcggcga cggcgtaggc tttctggcgg ctgttggcga
     3961 cggcgcgggc tttggcggcg gggttgggga tgtggagcgc ggctgggtcg gtgtgggttt
     4021 cgccctgccg gcgcacaccc gcaccgatgg tccggccgct gggggcttcg ggggctaagt
     4081 ggtaggcggt gaagagtttg aagctgcgtt cgggtacgct gtcggggttc aggcggctgc
     4141 cgtcttggtc gcggggtttg ctttggctgt agcctgcctg tatctgccat tcgggcgtga
     4201 tgcggccgcc gacttcgatt tcccagccgt gggttttggc ttggttggcg gcgcgatagt
     4261 aggtgttgcc gctctggtcg cgtcctgctg cggtggcgag gttgttttta cgggcgcggt
     4321 acacggcggc ggatgcgttc agacgccctt caagccattc gcctttgatg tcggcttcca
     4381 gattgttgcc ggttacgggt ttcaggtagc tgccgtgttc gtctttttgc aattgcggga
     4441 cgaacaggct gctgtacgag ccgtaaagcg acaggttgcc ggtcagatcg aacacgatgc
     4501 ctgtgtaggg ggtgaaacgg ttggcggaca cataggtcat gccttgtgtg cggctgttgt
     4561 agctgcctgc gcggtagcgg ctgtatctgc cgccgagtat cagcgaaagg ttgtcggcgg
     4621 cgcggaaacg ggtggcgaga tagccgccga tttgccgcct ggtgtcgtat tgcgggatgg
     4681 tttgggcaaa cgatgatggc tgcggatagg cgcccgtgcg ggaaaattcg taggcgttgg
     4741 gaatggcgtt gggaatgatg ctgcgttcgc cgtatttgtt gctggcgtat ttgtagccgt
     4801 tgatacccgc gattaaatcg tgctcgcggc cgaacaggcg gtatttgccg gtcaatgaca
     4861 tgctggcgct gtgggtgcgc ggatcggcgt gccaataacc gggaatcagg tcggtggcgg
     4921 cagtgctgtg gtcgatggaa agtacgcctg ccacaccgta gggctggcgg aagcggctac
     4981 gggtgtagtc gtattcggct ttgagtttcc agtcttggtt gaagcggtgt tctatgccgg
     5041 cgaacaggtt gagcgcacgg ttgcggctgt tcgaccaatt tgtggcgggg ttgtcttttg
     5101 ggccgaaggc ggtggcataa ccttggctgt cgtacacggc gtagctgagc ggcgcgtctg
     5161 cggtttcttt cgcctgctgg tagtccatgc ctgcgtggac gcgggtttgc ggtgcgatgt
     5221 cgtattccaa aatgccgtag agttcggcat cgcggctgcg ttcgagctgc cgccacgagt
     5281 cgccgcgtcc gaaggtggaa accaggcggc cgcgcagcgt gccttcggcg ttcaggctgc
     5341 ccgatacgtc cgcgcccagc ccgaaatgtt tgcggttgcc ggcttcggcg cggacttcaa
     5401 acaatggctt gcgggtcggg tgtttgcgta ccagattgac ggtggcagaa ggctcgcccg
     5461 tgccgtccgg cagccccgcc acgccgcgca cgacttccac gcgctcatag gcggcggtgt
     5521 tggcattgcc cgtatcggcc agcgcgtcgg caacggggat gccgttgatt tggtagttgg
     5581 cgatgcggct gccgcgcgcg aacaggtagt tgtagcccgc gcggtcggag ccgtaaatct
     5641 ggcggctggt gccggtcgcc tgcaacaggg cgcggtcgag cgttttgatg ttttggtcgc
     5701 gcatttgttg cgatgtgatg acgctgacgc tctgcgggat ttcgcgcagg gtcatgggca
     5761 gcccgaacgg ggtgtgcgtg ccggaaacgg tgtagccgtc gttggaactc gcggtgcggt
     5821 cggcggtaac ggtgatggtc ggcaattcgg tgctttcctg cggtttgggg tcgtctgaaa
     5881 cagaaacatc ggcctgcgcg tacacgggta gcagggcggc aaaaagcagg gagtatttga
     5941 agcgtgtcat ggggtttcct ttgtgtgttg gtgtgcggtg gggttgtata gcggattaac
     6001 tttaaaccgg tacggcgttg ccccgccccg gcccaaaggg aacggttccc taaggcgccc
     6061 aagcaccggg cgaaccggtt ccgtaccatt tgtactgcct gcggcccgcc gccttgtcct
     6121 gatttttgtt aatcctctat gcttttggca tattgaaggt gtaggctgct tttagcttcg
     6181 cagaaactca gcttccttcg gaaacttcgt tttcaggcgg cctcggacgg gtcgggcaga
     6241 tcaatcagca ccaccgagca gccgttttcc gaacgcgggc ggtgcgacac cgacttcggc
     6301 acgaccgcca tctcgccctc gcgtatcgtc atgttgccgc cgtcggcgaa gtccaccgcc
     6361 atgtcgccct ccacggcaaa cagcactttg tcgctgtatc cgtgcgtgtg ccagccgtaa
     6421 tcgcccaaaa gtttgaccag gcggaattgg aacccgtggc ggttgatgat ttcgggctgc
     6481 cagtattctt tgatggcggc aaggtgctgt ttcaggttga tggtttcgtt ttgcatgggg
     6541 ttctccttgt ggtttgtttt gaataaaact actgcgccgc aacgggttct gccttttcaa
     6601 acgccgcctt caactgttcc gccgcctgta tcaactgccg cgcgccgccc gcgacaatgt
     6661 agttcgcggc aggcatgacg atgatttgct tgcgcttcca agcgttcgtg ccgcatacca
     6721 gcgcgttatc caacacttcc acggcagccg gcccttcctg cccgatggcg gcggtgcggt
     6781 cgatgatgaa aatccagccg gggtttttct ctttgatgta ttcgaaggaa acgggctgcc
     6841 cgtgcccttc gttgcgtaaa gattcgtcca cgggcggcag gccgatgtcg ccgtgtatcc
     6901 aacttgccaa ccgcgattgc gtgccgaagg cggacacctt gttgcctgta accgacagca
     6961 ccagcccgcg tcctttgcct ttggcggctt cgcgcttttg ggcgaacagc gcgtcaatct
     7021 gcgcattcaa ttccgccacg cgcgcttcct taccgaaaat ccgcgacagg gtctccatct
     7081 gcttctcgcc gctggtgcgg atattgccgt tgtccaccgt caaatctatg gtggtcgcgt
     7141 ttttcgccaa ctgttcatac gcttccgcac ccggcccgcc ggtaatgaca aactgcggat
     7201 tgtggcggtg cagggattcg caatcgggct caaacagcgt ccccaccgtt gccgccttgt
     7261 caaatgcagg ctgcaaatag tccacgcgca ccggcgcggt ggttgcgccc acattcacgc
     7321 ccggctcggt cagcgtatcc aacgccgccc agtcgtacac ggcgacgcgt tcgggattct
     7381 tcggcacaac ggcatcgccc cgcgcggtcg gcacggtcag cgtggcgaca ggtgtggatg
     7441 cggcttggga tgcggcggat acagtttttt cggcggcagg ttcgggcgaa caggcggccg
     7501 gcaggacggc gcaggctgcc caataaaaac gcggtttcac ggtgtgcggt tcctttgcat
     7561 acgaataaga atgtttatta ttaagcaaac aacctgcaga aaccacgccg caaaacgcaa
     7621 aattcccgat acggcaaaac aaattcccga aacggaaaag gttgtctgaa acaccctttc
     7681 agacgacctt ttccgttcca accaatccct gtgcttgatt attggtaata attcctattt
     7741 aattcatttg ttagacaact cgttcctatc caatcatgaa caccgccgcc atctaccgcc
     7801 agtaccaaac ctatgtccgc tccgataaat ccggctgggc gttggacggc tgttccgaca
     7861 gcgcactcat tgcgcaggca aaacagcccg gtttgcatct gaaaatgtgc atcaaccgct
     7921 tcgactcggg catcacctta tcacggatgc gcggcggcgg aacgggtgcg tttcccaccg
     7981 aaatccacaa tttcagccac aactgcgcct tgttcgtcat ggtatcgggg cagaaccggt
     8041 tacaaatggg cggcagggaa taccgcccgt ctgccggcga aatctggctg gtacgcggcg
     8101 aactggcgga cgtatccgaa accctgctgc cagacagcgg cggcatgtgc gcgctgcatt
     8161 tggatttttc gctggaaaaa ctgcgccgct ggcacgacga aggtttactg gacgaacgcc
     8221 tgttttcgcc gcaaacgata ggccgattcg ccctgcaacg gctggcgcaa aacgcgggga
     8281 cactgacggc ggcggcctgc cccctgctgc aacgcccgtt cgaatcggac ggcttcggcc
     8341 tgctcgccga cgaagccgac gcgctggaac tctccgcccg attattacgc ttcaccttcc
     8401 gccgccacga caacggctac cgccgccggc gcatagacga agccgccgat attttgaaca
     8461 gcgaattcgc ccgcccgctg accatcgccg aaatcgcccg ccgcgtcggg ctgaacgaat
     8521 gctacctgaa acgctatttc aaagcgcaaa ccggcgaaac cgtcgccgga cgcctgcgcc
     8581 gcctgcggct ggaacacgcg ctcgccctca tcaaatcggg cagcaccatc caagccgcga
     8641 tgcacttttg cggctaccgc cacgcgggac ggttcaacga agcgttcagg cggcattacg
     8701 gatttttgcc ttcggatgtg aaaaagtgct gatgggccga cggcatagat attttgattt
     8761 gaaacaacca ttaaaaaaga tcgtctgaaa aagcaatttc agacgatctt ttttcattcg
     8821 cggcggcagt gtcgccccct gcccttatcc caaaaattct ttcaaaaaca gcaacacgca
     8881 ggcgagtttg tcggcggatt cgcgttgggt gccgttgccg gtatggccgc cgccgtcagg
     8941 cgagtagagc caagattgcg gcgaggtttc gcgcagtttg gcgtagaatt tgagcgcgtg
     9001 ggcgggatgg acgcggtcgt cgctgaggct ggtggtaatg agtgcgggcg gataatcgat
     9061 gccgtctgaa agattgtgat acggcgacaa ttcgcccagc cggcgtttgc aggcttcgta
     9121 tttctgcgga ttgccgtatt cgtccgtcca acttgaaccg gcggacagca gcggataacg
     9181 gatcatatcg gtcagcggta cttcgcacac cagcgcaccg atgctttgcg gttcgcgcac
     9241 gaaggcggcg gcggtaatca ggccgccgtt gctgccgccc tgcaagccga tgtgtttggg
     9301 cgaactcatg ccgcgttcgg acaaatcacg cacgactgcc aacaaatcat caacgctttt
     9361 gtgtttgctg attccctgcg ccgcctgatg ccagcgcggg ccgaattctc cgccgccgcg
     9421 gatgtttgcc aatacaaagg cattgccctc ttccagccaa tatttgccga cgctgcccag
     9481 ataatgcggc aattcaggaa tgccgaaacc tccgtaagca tagactaagg tcggcgtgtc
     9541 gggcgcggcg tttttgccga cgtggaaata aggaatgcgt tcgccgtcgg acgacaccgc
     9601 ccaaaactgc cgcacttcga tgccgtctga aacaaactgc tgcggctgga ggcgcatgac
     9661 ggtcagttcc atcacgttca aatccagcgc aaacagcgtc agcggcgtgg tgaaatcgct
     9721 ggcggcaaga taaaccacgt cgccgcccca cggttggtcg gtcatttcca acgcgccgga
     9781 gggcaggtgc ggcaactcgg cttcctgcca tttgctgtcg gcaaaccgcc acgctttcag
     9841 acggccttgt acattctcca gcaggcttgc caccacaaaa cgcttggtcg tttccacgct
     9901 ttccaatgcc tgcgtttcat cgggcgcaaa caaaagctgc gccgccccga gttcgccccg
     9961 attcagtttc accgccacca acgcgccact cggatagctt tggttcgcgc ggtgccagtc
    10021 cttgcgcagc gtcagcaaaa gatgtcccgc cagatagccg accacatcgc aatcattagg
    10081 caggttcaac ggtttcgccc cgccttcgga cgacacctgc aaatacgtct tggtgtaaaa
    10141 accgtccgac gcttcaatca aatcaatcgg cgaaccctgc ggatcgaggt aacgccacgc
    10201 gtttaccatc atcgcgcctt tatcgatttg gtacgccggc aggctttcct cgaaactctt
    10261 gccgcgttcc accagccaca cttcgcgcgg atagcccgat tcggtcaact ggcgttcgtc
    10321 ccaagccgga cacacccaca cgctgttttc atcgcgccac gacacatggt ttttgcctgc
    10381 cggaaagtga aaaccgccct ctaccaattc ccctgcttcc aaatccactt ccagcgtata
    10441 cgccgtatcg ccgcccgatt tgttcaaagt cagcagcgcg cggttgggct gctccaccaa
    10501 gtgcgacacg ccgcccaaat acacatcgtc gccgagcaac tcatcgaaat ccgccaccga
    10561 aaacaggatt ttccactcgg gatagccgga acggtaggtc gccgccgtac acacgcggta
    10621 cacgcccttc ggatattccg cattctgatg gaaatggtac atccgcgcgc ggtgttcctg
    10681 acaaaacgga atctgccgcg tgtcctgcat ttgattcaaa atgccgtctg aaagtgcgcg
    10741 cgccttgtcg ttgtttaaaa aacgcgcgcg cgtttcggca ttcgcttcag cagcgaagtt
    10801 ttgcgtttcg gcggaatcga ggttttcaaa atggcggtag gggtcggggt aggatttcat
    10861 cggggtcctt gagggtcggg caggtcttta taatcgggga aatgccgtct gaaacggggt
    10921 tcaggcggca tttctgcggc ggctttccgt tgcggtcagc ggtgcaggcg acgcaccaga
    10981 atatgcgagt ttcgtccgtt gctgcggtag tctttgcgcc gcgtttcggg cagctcgtct
    11041 tccgatgccg tctgaaagcc gcgttcggca aaccattcgc cggtatttgt ggacagtgcg
    11101 aacagcctgc ttatgcctat gccgcgcgcc ttatcgataa tgtgggcaag caggcgttcg
    11161 ccgtagccgc cgtcctgtgc ctgcggcgag acggcaaggc aggcgatttc gccgcaatcg
    11221 gcttcggcaa aggttttgag tgcggcacag ccgtacaggt tgccgtcgtg ttcgaggatg
    11281 gaaaattcgg aaatgtggtt ttcgaggtat tcgcggctgc ggtgcaatag gatgccctgt
    11341 tcttccagcg ggcggatgag ggcggcgatg tgcgggatgt cgccgctgtg cgcctgccgg
    11401 atggagacga aggcttcttt ggcaatggac gtgccgatgc cgttgcgggt gaagagttct
    11461 tgcagcaggc tgccgtcggc ggccccgttg aggatttgga cgcgatgcac gccgccttcg
    11521 agcgcggcaa cggcggacga aatcagtcgt cgggtttcgc tggcggcgtg ttccgccagc
    11581 gattgcgctt cctgtgccga gagggtttcg gcgagcgtgc cgtcggggcg ggaaatgccg
    11641 tctgaaaggg tcaggtaaac gagtttttcg gcctgaagcg agacggcgac ggaagcggcg
    11701 gcctgcacca tatcgagatt gaaggttttg ccgccgtagg aatgcccgag cggcggcatc
    11761 cagacgatat tgcccgcgtc gagttggaaa cggagggcgg cggtgtcggt tttgcggata
    11821 acgcccgcgt attccatatc ggttccgtca atcacgccta tcggacgggc ggtcaggaag
    11881 ttgcccgata cgagcgggac ggaaggcgcg cgcgcgaatc ctgaaacgct gccgcacaat
    11941 gcggcttcaa aacggctgcg gacggtgccg gcaaactgct gcgcctgtcc gagcgaggtt
    12001 tcgtcggtaa cgcgcaaacc ccggcaataa tgcggcgtgc ggccttgcgc ggcggcgagg
    12061 cggtcgagga agtggtacgc gccgtggatg aggacgagtc ggatgcccag ttgcgacaac
    12121 agcccgatgt cggcggcgag cttatttaag gtgccgcctt cgagcaggcg gccgtctatg
    12181 ccggcgacca gtgtcgtgcc gcgcatttgg cggatgtagg gggcggcttc gcggaagtgg
    12241 gcgacaaagc tgtcgggcgc gttcatagga tgaagaggta ggaaagctgc ataatgagga
    12301 cgataagtgc gaacagggtt gcaatagtcc agttgagccc ttcctgacgg gcgggcggta
    12361 cggaaacctg cggtgcggcg gcaggtgcgg cagcggcggt tgcgggcggc gtatcgtgca
    12421 gggttgtacc gccgttgagg atatcggcga tttcgtcgcg ggaaatctgt ttcttgctaa
    12481 tggcgtgcgt gccgatgcgg tggacgagtt tgacatccga aacagcttcg ggcaaatcgt
    12541 tgaatatagg ttctttcgtg cttgccagat ggtctttggc tttaaacagc ccttcgcatt
    12601 tttggcagac gacgaagcct tgggcgacgt tgagctgggt ttctttgacc cagaggcggg
    12661 ttttgcagtg cggacagaaa caggcgggca tgatgttttc tcggtgtgtg tcggtttgat
    12721 gccgtctgaa gcggcaggtg gttcggacgg catatgcttt atttttattc tacgccgtac
    12781 tgccggcggt aggtgcggac gggttcgagg aactgtccga attcggggtt gttttgcaac
    12841 aggataaaca aatcgttcag gctggcgatg ggggcgacgg gcaggccgta ttgtttttcc
    12901 acttcctgaa ccgcgctcaa ttcacccgtg cctttttcca tgcggtcgag cgcgatggcg
    12961 acaccggcgg gggttgcacc ctccgcttca atcagtttga ttgattcgcg tacggatgtg
    13021 ccggcggaaa tcacgtcgtc gataatcagc acgcgccctt taagcggcgc gccgaccaac
    13081 acgccgcctt cgccgcggtc tttggcttct ttgcggttgt aggcaaacgg gacgttcacg
    13141 cctttttccg ccagcatcat cgcggttgcc gccgccaaaa taatgccttt gtaggcgggg
    13201 ccgaacagca tatcgaatcg gatgccgctt tcaatgatgg attgtgcata gaattttgcc
    13261 agttgcagcg tggacgcgcc gtcgttgaag aggccggcat tgaagaaata gggcgaccgc
    13321 cgtccggctt tggtggtaaa ttcgccgaat ttcaaaacat tttgggcgag ggagaatttg
    13381 aggaaatctt ggcggaaatc agtcattttg tgctttctgt cagatattgg gacgcagttg
    13441 cgattctacc gccccgtgcg gcgcgcttca actgccgccg ccttgccgca aggcgcgttt
    13501 caactgtttc aacacctgcc agtttcgggc tttgagttcg ggttggcgca acagccgggc
    13561 gggatggtcg atgatgaaga agggacggct gccgcacaaa gtttcaatca tcgcctgccg
    13621 ttccaggttg acaaacgcct gtccgaggaa taggacggcg ggggcgcggc agccgtcgag
    13681 ttccccggcg atttgaccca gcgcatccgc gacggcctgt tcagacggca tcgggttacc
    13741 gacggcggcg gttttcaccc aacaggtttt gtggacatag gcggcatcca gtcctgcggc
    13801 tttgaggatg ttgtcgagca ggatgcccgc tttgccgtgg aacagttgcc cgtaaaccgc
    13861 atcctcgatc ggcggacaca ggctgacgac ggcaagcttg gtgatgcccg aagcggcggg
    13921 aacgggggcg atgccgtctg aaaggccggg cgggggcgtt tcggtttcag gcgcgggttt
    13981 gcgcgtatgt acggcggcgg tttccaacgc tttcatcgtt tcgagccgcg cctgaacgtt
    14041 atggggttgg gaagggcgga tcgtggcggc gcggacggtt tggcgacgtg cctgtgccgg
    14101 ggttgcgggt gtgtttttgg gcggcaggac ggcggcggcc tgtttcagcc acatcggacc
    14161 caagcccaaa gcctcgtgca ggtggaggta gcgcgcgctt aacatatttt ctccattaag
    14221 acggcatctt cggtttgccc gtcggcggtg cagtaatagt ttttccgcct gcccgcaatg
    14281 ctgaagccgt gtttggtata cagtgcctgt gcggcggcgt tgcctgcgcg gacttcgagc
    14341 agcaggcgtt gcgtgccttc gggcagatgt gcgtaccaat attcgagcag ggcggacgca
    14401 acgccccgtc ggcggcattc gggcgcggtg gcaatcaggt gcagttcgga ttcgtcgggc
    14461 aggttttgcc aaacgataaa ggcggcaatc ctgccgtctt tttccgcaag gaaaacctgt
    14521 tcggacggcg aaacaagcgc ggactcaaat tggcgctgcg tccacgcgga cgggttgcag
    14581 acggtatcga gcgcggccag tgcggcgcag tcggacggta aggctgggcg gatgttcatg
    14641 ttcgtgcctt ccgttccgcc tgttctttgg cagtcagggc gattttgttg cggacgtaga
    14701 gcagttcggc gtgtgccgcg ccagttgcgg gatagccgcc gccgagggcg agcgcgagaa
    14761 aatcggcggc ggtcggcata tcgggtttgc ctgagaaggg cggacggttt tccagtgcga
    14821 acgcactgcc gatgccgtct gaaaagacgt acccctcggg gagggcaatg tctgccgccc
    14881 taccgacttg ataatcgctc aaacggcggc ggttcagcgt gtcgaaccac gcataaaaca
    14941 cttcgcccat acgcgcgtcc gcagcggcga gtatgcagct ttgcggcggc ggcagcgagg
    15001 cggcggcatc gagcgtgggg atgccgatta aaggcgtgtc gaacggcgtt gccaaacctt
    15061 gcgccacgcc gatgccgata cgcagtccgg taaacgcgcc ggggcctttc gcataaacaa
    15121 tcgcccccaa atcggcggcg gtaatgcccg catttcggaa tagggtgcgg atttccggca
    15181 ggatcagttc ggactggcgg atgccgactt cctgatggaa cagacggatt tcgccgtcgg
    15241 cgcgcagcgc gagcgacaaa taggaagttc cggtatcgac ggcgaggacg gggcggttga
    15301 aatcggcttg catggtgtgg ttctcgttgg ttcagacggc attatatagt gaaatcggct
    15361 tgcctgccgt gccgtcgtgt cctagggcgg tatggcgcaa aaatgccgtc cgaacggtaa
    15421 attatcgtgt tcggacggca tttttcaaat actactgttt gtcggcgatg ccgatttcgt
    15481 gaaccttttc ccctatcttc acggttgccg agccagcgat ttcttgggcg cggtcgccga
    15541 aaagggcgag gcggtaagtg cctttctctt cgccgccgta gcgcgtgtcg cccaaaatga
    15601 cggcgtgtga tttttcatct gctttgagtt cggcggaggc aagctcaaca ttctgctcgg
    15661 gtgttttcag gtgttcgatt ttgccgtgtc cctgtttggc ggcgaaatct atggtatagg
    15721 tcagttttcc gccggcatcg tcggagctga atgctttgcc gtgatactcg gctttgccgt
    15781 caggcagttg gttgaaggcg gtatgttctc cgcccaaatc gctgacaagg aaggagcgtt
    15841 ggtttatcag gctgtcgatt ttgtcggggt tgttgatttt ttcaatccgt agggcaacga
    15901 cggcggagtg atcctgtttg tatatttgaa attcgccgct tgccagtgtg atggtttgtc
    15961 cgtccacttc gattttttgc acgaagtcga agcggctgat tttgtcgttc ttcagtttgc
    16021 ccgtgttgag gctgttgtct ttgccgccgg ctttgaaagt tttttccgca ccttgtgccg
    16081 acagggtcag tgttccgttt tggggaatgg aggcttccaa tgttagggat ttcaaacctt
    16141 tgtctttatg gtcgagcggc gcggttaatg catcggcaag ccccgtgccg atgtcggcgg
    16201 cgacaccacc gcctccgccc ctccgctgct gcaggcggtc agaatcaggg ccggcggtca
    16261 aagaaaggca gcagaaggta gttcggttca caggtttact cctagtcata cacagaatag
    16321 ataatatata aacgttttgg ttatggtatc tttttttgca tactgcatca atgaggcagg
    16381 tcagagaagc aaaaatcaaa tgccgtccga acggcgttca gacggcattt tgtttacagg
    16441 caacctgtta tttgacgatt tggttcaatt cgcccttggc ataacggctt gccatttttt
    16501 ccaacgaaac aggtttgatt ttgcctgcct gaccttcgca accgaacgca agataacggt
    16561 cgaggcagat ttgcttcatc gcttcaatgg ttttgcccaa gtatttgcgc ggatcaaagt
    16621 cggacgggtt ttcggcaagg tagcggcgta ccgcgccggt ggaagcgagg cgcaggtcgg
    16681 tatcgatgtt gactttgcgc acgccgtgtt tgatgccttc gacgatttct tcaaccggca
    16741 cgccgtaggt ttcgccgata ttgccgccgt attcgttgat gactttcagc cattcttgcg
    16801 gaacggagct ggagccgtgc atcacgatgt gtgtattggg cagggcttgg tggatttcct
    16861 tgatgcggtc gatacgcaat acgtcgcctg tgggcggacg ggtgaatttg tatgcgccgt
    16921 ggctggtgcc gacggcaatc gccaatgcgt caacgccggt atctttaacg aaacgcacgg
    16981 catcttcaac gctggtgagc atttggtcgt gtgagagttt gcctgccgcg cccactccgt
    17041 cttcttcgcc tgcttcgccg gtttcgaggt tgcccaatac gccgatttcg ccttcgacgg
    17101 acacgccgca ggcgtgggag aagttgacga cggtacgggt ggcgttgacg ttgtattcgt
    17161 aagaagaagg ggttttgccg tcttcgagca aagagccgtc catcatcacg gaggagaagc
    17221 ccagttggat ggagcgttgg cacacgtcgg gcgatgcgcc gtggtcttgg tgcatcacga
    17281 cggggatgtg cggaaattct tcgactgccg ccagaatcag gtggcgcaaa aacggcgcgc
    17341 ccgcgtattt gcgcgcacct gcgctcgcct gtacgatgac gggcgcgttg acttggtcgg
    17401 cggcttccat aatggcgcgc atttgttcga ggttgttgac gttgaacgcg ggcaggccgt
    17461 agctgttttc ggcggcgtgg tcgagcagtt ggcgcatgga tacgagtgcc atttgtgtct
    17521 ccttgggcaa taggtaaata aggcggatta taatgttttt tacggcaaaa aaccataaac
    17581 ggctcattga ttttatatta acgataacgg cgggcagatg gggcggattt tgggcggttc
    17641 gggattttgg tgtgttgttt atgataatgt tttcactggt tttttgatat ttgtgtggga
    17701 cggttatggt tttggacggg tttgcggcgt attttgacgc ttatttggaa aacatcgtgc
    17761 gcgagggcaa gtcggagcac acggttgcgg cataccggcg cgatttggaa gaactgtttg
    17821 cactgttggc acaaatgccg tctgaagatg caggcggcgt gccgcaggac ttgtcgcggc
    17881 gcgattttac ggcggcgttg cggcggctgt cgcagcgcgg tttggacggt cggacgctgg
    17941 cgcgcaagct gtcggcgtgg cggcagtatt gcgcctggct ggtcaaacgc gggctgatgc
    18001 gcgccgaccc gaccgccgac atcaaaccgc cgaagcagcc cgagcgcgta cccaaagccc
    18061 tgccgcagga atggctgaac cggatgttgg atttgcccgt ggacggcggc gacccgctgg
    18121 cggtgcgcga ccacgcgctg ttcgagctga tgtacggcag cggtttgcgc gtgagcgaga
    18181 tacacggctt gaatgcagat gatgtatatt tggacgaagc gtgggtacac gttaccggca
    18241 aagggcgcaa gcagcgtcag gttccgctga ccggcaaaag cgtggaagcc ttgaaaaact
    18301 atctgccgct gcgtcagacg gcatcggacg gcaaagccct gtttaccggc aggaacggca
    18361 cgcgcctgag ccaacgccaa atccaaaaac gcctcgaatc gtgggcggcg caatacggcg
    18421 acggcaggca cgtttcgccg catatgatgc gccacagcta cgccggccac ctgttgcagg
    18481 cttcgcgcga catcagggcg gtgcaggagc tgctcggaca cagcagcctt tcgaccacgc
    18541 agatttatac caagctcgat ttcgaccaca tcgcccgcct ctatgacgaa gcccacccgc
    18601 gcgccaagcg gcaggacgaa tgacatacgg caaaatcagc cgtcagccgc acgctcttga
    18661 tatataattg accgttgcac ccggacgaca cataaaaaag acacaccatg aacccaagcc
    18721 ccctactcga cctgattgac agcccgcaag atttgcgccg cctggacaaa aaacagctgc
    18781 cgcgccttgc cggcgagttg cgcgcctttc tgctggaatc tgtcgggcag accggcgggc
    18841 atttcgccag caatctgggt gcggtcgaac tgaccatcgc cctgcactat gtgtacgaca
    18901 cgcccgaaga caagctggtg tgggatgtcg gacaccaaag ctacccgcac aaaatcctga
    18961 caggcaggaa aaaccagatg cacaccatgc gccaatacgg cggtttggcg ggttttccga
    19021 aacgttgcga gtccgagtac gacgcgttcg gcgtggggca ttcctccacc tccatcggcg
    19081 cggctttggg catggcggcg gcggacaaac tcttgggcgg cgaccgccgc agcgtcgcca
    19141 tcatcggcga cggcgcgatg acggcggggc aggcgtttga agccttgaat tgcgcgggcg
    19201 atatggatgt ggatttgctg gtcgtcctca acgacaacga aatgtcgatt tcccccaacg
    19261 tcggcgcgtt gcccaaatat cttgccagca acgtcgtgcg cgatatgcac ggactgttga
    19321 gtaccgtcaa agcgcaaacg ggcaaggtat tagacaaaat acccggcgcg atggagtttg
    19381 cccaaaaagt cgaacacaaa atcaaaaccc ttgccgaaga agccgaacac gccaaacagt
    19441 cgctgtcgct gtttgaaaat ttcggcttcc gctacaccgg ccccgtggac ggacacaacg
    19501 tcgagaatct ggtggacgta ttgaaagact tgcgcagccg caaaggccct cagttgctgc
    19561 acgtcatcac caaaaagggc aacggctaca aactcgccga aaacgacccc gtcaaatacc
    19621 acgccgtcgc caacctgcct aaagaaggcg gggcgcaaat gccgtctgaa aaagaaccca
    19681 agcccgccgc caaaccgacc tatacccaag tattcggcaa atggctgtgc gaccgggcgg
    19741 cggcagattc ccgactggtt gcgattaccc ccgccatgcg cgagggcagc ggactggtgg
    19801 agtttgaaca acgattcccc gaccgctatt tcgatgtcgg catcgccgag cagcacgccg
    19861 ttacctttgc cggcggtttg gcgtgcgaag gcatgaagcc cgtcgtggcg atttattcca
    19921 cctttttaca acgcgcctac gaccaactgg tgcacgacat cgccctgcaa aacctgcccg
    19981 ttttgtttgc cgtcgaccgt gcgggcatcg tcggcgcgga cggcccgacc catgccggct
    20041 tgtacgattt gagcttcttg cgctgtgtgc cgaacatgat tgttgccgcg ccgagcgatg
    20101 aaaacgaatg ccgcctgctg ctttcgacct gctatcaggc ggatgcgccc gccgccgtcc
    20161 gctatccgcg cggcacgggt acgggcgcgc cggtttcaga cggcatggaa accgtggaaa
    20221 tcggcaaggg cattatccgc cgcgaaggtg agaaaaccgc cttcattgcc ttcggcagta
    20281 tggtcgccac cgcattggcg gttgccgaaa aactgaacgc caccgtcgcc gatatgcgct
    20341 tcgtcaaacc gatagacgaa gagttgattg tccgccttgc ccgaagccac gaccgcatcg
    20401 ttacccttga agaaaacgcc gaacagggcg gcgcaggcgg cgcggtcttg gaagtgttgg
    20461 cgaaacacgg catctgcaaa cccgttttgc ttttgggcgt tgccgatacc gtaaccgaac
    20521 acggcgatcc gaaaaaactt ttggacgatt tgggtttgag tgccgaagcg gtggaacgcc
    20581 gggtgcgcga gtggctgccg gaccgtgatg cggcaaatta aaccgcttga ccgcgccgtc
    20641 gttatcgggc ggcgttttta aacggcgttt gtttctgcgg tttttttatt gaaaccccgc
    20701 aggcggcagg aagggttcgg gcggcggctt tcgggcggtg cttggtgtgc cgttgcgcgt
    20761 ttggaaattt attccgcttg tccgtataac ggcggcggtg ccgtctgccg atacaaggca
    20821 aaatgccgtc tgaaacgctt caggcggcat ttttcggcgt gagggtttta ggcttcgaca
    20881 attttgccgc gcagggaaaa ggtgtaggct tcggtgattt ccaaatcgat catttggttg
    20941 atcatgtcgg gcgtgccggt aaagttgacg acgcggttgt tggcggtacg ggcttggagc
    21001 tggtcggggt cttttttgga gatgccttcg accaggcagc gttgaaccgt gccgatcatg
    21061 gtttggttga tgcgggcggt ttcggcttcg atgacttcgt tcaaggcttc gaggcggcgc
    21121 actttttctt cgtgcggcgt gtcatccggc aggttggcgg caggcgtgcc ggggcgcggg
    21181 ctgtaaataa acacgaagct caagtcgaag gcaatgtctt tcaccagttt caaggtttgc
    21241 tcgaactcgc gttcggtctc gccggggaaa ccgacgatga agtcgctgct caggcacaaa
    21301 tcaggacgga tggcgcgcag tttgcggatg atggatttgt attccaaagc ggtgtagccg
    21361 cgtttcatcg cgctcaatac gcggtcggaa ccgctttgaa tcggcaggtg caggtgggaa
    21421 accagtttgg gcaggtcgcg gtagcactcg ataatcgagt cggtaaactc gcgcgggtgg
    21481 ctggtggtga agcgcatacg ttcgatgccg gggatttcgt ggacgatacg cagcagggtg
    21541 gcgaagtcgc agatttcgcc gtcgtccatt tcgccgcgat aggcattgac gttttgtccc
    21601 aagaggttga tttctttcac gccttgctgg gcaaggttgg cgatttcggt caatacgtcg
    21661 ttgagcgggc gggagaattc ttcgccgcgc gtgtagggga cgacgcagaa ggagcagtat
    21721 ttggaacagc cttccataat cgacacaaat gccgcgccgc cttcgacgcg ggcgggcggc
    21781 aggtggtcga atttttcgat ttcggggaag gaaatatcga cttgcgacag cccgctggtt
    21841 tctttgtcca caatcatttt gggcaggcgg tgcagcgttt gcgggccgaa aaccacatca
    21901 acataaggcg cgcgtttgat gatgttttcg ccttcttgcg aggcgacgca gccggcaacg
    21961 ccgatgatga ggccggggtt tttttctttg agcggacgga cgcgccccaa gtcggagaac
    22021 actttttcct gtgctttttc gcgcacggaa caggtgttga acaagatgat gtcggcttcg
    22081 tcggcttggg taacctgttc gatgccgccg tgttcttcgg caaggacgga cagcattttt
    22141 tcgctgtcgt actcgttcat ctggcagccg aaggtgcgga taaatacttt tttcatggtt
    22201 tgtgtctttc tcgggcagcc gtaatcgcgg ggctgatggt tgttggaatg aaaaaatttc
    22261 agacggcacg acgatgccgt ctgaaaatcg gtgcggatta tagcacgatg tgggtttggg
    22321 aggcaaaata ttgttttaaa atatgaattt aatcggtcgg aacggctgta taatgtttgg
    22381 ctttaacggg aggtgtgtgt atgggcggca ttgctgctgt gtgcgtgtac cagcaatttc
    22441 ggcgacaggg aacatcagtt cctgcgttat agtggattaa atttaaacca gtacagcgtt
    22501 gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
    22561 ttaatccact atatcagacg gaagagggaa tcgcacaaac ggttgttaaa ggcaaaacga
    22621 cccgggcgga ggtagaggca cgtttcggga agcgcaaccc tttcggttgt tatgcctatc
    22681 acgaggtcag cctgccgatt tataattttt tgccgaccaa tttcatctat atgaaatcgg
    22741 agcggcggca ttgggaatgg tgcgcggatt acgacgggga gggagtcgtc cgggactacc
    22801 gctttacaca taaagtggaa aaagacgagc gttccgtcat ccgggatacg gttggcgtaa
    22861 tccgcaaaga agcgggcaaa tccttgtcgc aacctgaaaa atgataaaat ggggctttct
    22921 gcttccaagc ccgaaacctg ccgttcagac ggcatttgag gataaatatg aaccgtaacg
    22981 aaattttatt cgaccgcgcc aaggcggtca ttcccggcgg cgtgaattcg cccgtgcgcg
    23041 cattcggcag cgtcggcggc gtgccgcgct tcatcaaaaa agccgaaggc gcgtatgttt
    23101 gggacgaaaa cggcacgcgc tacaccgatt atgtcggctc ttgggggcct gcgattgtcg
    23161 gacacgcgca tcccgaagtc gtcgaagccg tgcgcgaagc tgcgttgggc ggtttgtcgt
    23221 tcggcgcgcc caccgaaggc gaaatcgcca ttgccgaaca aattgccgaa attatgccgt
    23281 ctgtcgaacg gctgcgcctc gtcagctccg gcacggaagc gacgatgact gccatccgtc
    23341 tggcacgcgg ttttaccggc cgcgacaaaa tcatcaaatt tgaaggctgc taccacggcc
    23401 attccgacag cctgttggtg aaagcaggca gcggtctgct taccttcggc aatccttctt
    23461 ccgccggtgt gcctgccgac tttaccaaac atactttggt actcgaatac aacaacatcg
    23521 cccaactcga agaagccttt gcccaaagcg gcgacgaaat cgcctgcgtg attgtcgaac
    23581 ccttcgtcgg caatatgaac ctcgtccgcc cgaccgaagc ctttgtcaaa gccttgcgcg
    23641 gattgaccga aaaacacggc gcggtgttga tttacgacga agtgatgacc ggtttccgcg
    23701 tcgcgctcgg cggcgcgcag tcgctgcacg gcatcacgcc cgacctgacc acgatgggca
    23761 aagtcatcgg cggcggtatg ccgcttgccg cgttcggcgg acgcaaagac atcatggaat
    23821 gtatttcccc gttgggcggc gtgtatcagg caggtacatt atcaggcaac ccgattgccg
    23881 tcgccgccgg cttgaaaacg ctggaaatca tccagcgcga aggcttctat gaaaacctga
    23941 ccgccttgac acaacgcctt gccaacggta ttgccgccgc caaagcgcac ggtatcgagt
    24001 ttgccgccga cagcgtgggc ggtatgttcg gtctgtattt cgccgcacac gtgccgcgaa
    24061 actatgccga tatggcgcgc tccaatatcg acgctttcaa acgcttcttc cacggcatgc
    24121 tcgaccgcgg cattgccttc ggcccgtccg cttatgaagc aggtttcgtt tccgccgcgc
    24181 atacgcccga gctgattgac gaaacggttg cggttgcggt tgaagtgttc aaggcgatgg
    24241 ctgcatgatg ttttgacgga cagagtttct ctgttcgatt tgtttggcag attgaagtaa
    24301 gaatgcacac cgccgtcatt tccgcgcagg cgggaatccg gacctttcag tttctgtaat
    24361 gattgaaaat aacggcaagc ccgaccttcc ggattcccgc ctgcgcggga atgacgggcg
    24421 tgtacatttt tgatttcaat ctactgtaaa aatgccgtct gaaatatata gtcaattaaa
    24481 atcaaaatag gacagtagtg catcgtcaaa tcgggcgtaa tcagacaaaa cggttcgcag
    24541 ataccgctta atattcgccc acactttctc aatcgggttg ggctcgggcg aa
//
LOCUS       DAXGCP010000021        22835 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.021, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000021 DAXGCP010000000
VERSION     DAXGCP010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22835
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.021"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(248..1465)
                     /locus_tag="ACFJCW_000758"
     CDS             complement(248..1465)
                     /locus_tag="ACFJCW_000758"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HFC4150958.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLATGEQVTIGLLAMALKDIGVDAKSYTGWQVSL
                     KTDTAHTKARIESIDDEKMRADLAAGKVVIVAGFQGISSEGNISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERKDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFDLG"
     gene            complement(1667..2395)
                     /gene="rph"
                     /locus_tag="ACFJCW_000759"
     CDS             complement(1667..2395)
                     /gene="rph"
                     /locus_tag="ACFJCW_000759"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HFC4150959.1"
                     /translation="MPDYIRTSRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SVDENAPPFLHGKNQGWVTAEYGMLPASTALRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPILE
                     AVAAVSAGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEGAPFSLDELG
                     KLVALAQKGIGELLRYQQNALSVA"
     gene            complement(2477..2941)
                     /locus_tag="ACFJCW_000760"
     CDS             complement(2477..2941)
                     /locus_tag="ACFJCW_000760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HFC4150960.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVGNTVKHLLVANKGAREMAQDL
                     VDYADENGAGLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3158..3934
                     /locus_tag="ACFJCW_000761"
     CDS             3158..3934
                     /locus_tag="ACFJCW_000761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC4150961.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALTHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERITQINPQCEVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKEKMRVPCVYSTENIMPPQSGAAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQGAVEHIAGKK"
     gene            3938..4069
                     /locus_tag="ACFJCW_000762"
     CDS             3938..4069
                     /locus_tag="ACFJCW_000762"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150962.1"
                     /translation="MPSETGFRRHLNKRGNQAVGSEKPTSARLKPYSQSTPFQNICI"
     gene            4179..5033
                     /locus_tag="ACFJCW_000763"
     CDS             4179..5033
                     /locus_tag="ACFJCW_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HFC4150963.1"
                     /translation="MPPIPALSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVEITGQYLHYIAQMEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTEAVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAAETKLPEVYIADLMQAWLGILSRAKHTRSHEVIQETLSVRAQMTAILRRLNEHGIC
                     RFHDLFNPEQGAAYVIVNFIALLELAKEGLVGIVQEDGFGEIRISLNHEGAHSDGIFG
                     TRGGRDVF"
     gene            5074..6282
                     /gene="pncB"
                     /locus_tag="ACFJCW_000764"
     CDS             5074..6282
                     /gene="pncB"
                     /locus_tag="ACFJCW_000764"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HFC4150964.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNVSTVY
                     PLADIREDLEAELDALCRLRFTHDELGYLRSLRFIKSDFVDYLELFQLQRRFVEVGTD
                     DKGRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVYLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKG
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFGIPEPRTP"
     gene            6374..8092
                     /gene="argS"
                     /locus_tag="ACFJCW_000765"
     CDS             6374..8092
                     /gene="argS"
                     /locus_tag="ACFJCW_000765"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HFC4150965.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGVAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLEFTGNTVIRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVADDLVEKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRIGRLKAGRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENAKAEFIGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERATALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSDYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLTEPLEKQLAAELLKFENVLQSVAD
                     TAYPHYLAAYLYQAATLFSRFYEACPILKAEGASRNSRLQLAKLTGNTLKQGLDLLGI
                     DVLDVM"
     gene            complement(8028..8460)
                     /locus_tag="ACFJCW_000766"
                     /pseudo
     CDS             complement(8028..8460)
                     /locus_tag="ACFJCW_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257775.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8656..10074
                     /locus_tag="ACFJCW_000767"
     CDS             8656..10074
                     /locus_tag="ACFJCW_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HFC4150966.1"
                     /translation="MNIHALLSEQWTLPPFLPKRLLLSLLILLVPNAVFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWPAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAVKTDFRHIAVCAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATRL
                     SEPKSQKILFIVAESWGLPGNPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQKIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIRRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
     gene            10080..10340
                     /locus_tag="ACFJCW_000768"
     CDS             10080..10340
                     /locus_tag="ACFJCW_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150967.1"
                     /translation="MPSERTNSLQTAFCRQTDLLKPTFFIISDKLLCKNPKIQNHRKL
                     SKKQKPSAVVPAKAGIQTRKPQKFIGKTETRKQRTEFPPAQE"
     gene            complement(10527..11273)
                     /locus_tag="ACFJCW_000769"
     CDS             complement(10527..11273)
                     /locus_tag="ACFJCW_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC4150968.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAACSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTAALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(11257..11436)
                     /locus_tag="ACFJCW_000770"
     CDS             complement(11257..11436)
                     /locus_tag="ACFJCW_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150969.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(11452..12126)
                     /locus_tag="ACFJCW_000771"
     CDS             complement(11452..12126)
                     /locus_tag="ACFJCW_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HFC4150970.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYDSELVRTGIAVLNELGVEE
                     SAGRYETPVRRRASAKSGHSYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQ
                     AYGTRSRDNLRAAAEGRKVSVRVFETDRYQREVAQVSAGKTDLNLMQVQDGAAWHYKS
                     YAKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDSVG
                     EWLGIW"
     gene            complement(12195..12866)
                     /gene="rpiA"
                     /locus_tag="ACFJCW_000772"
     CDS             complement(12195..12866)
                     /gene="rpiA"
                     /locus_tag="ACFJCW_000772"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HFC4150971.1"
                     /translation="MTTQDELKRIAAEKTVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSGELLARYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(12943..13425)
                     /gene="ispF"
                     /locus_tag="ACFJCW_000773"
     CDS             complement(12943..13425)
                     /gene="ispF"
                     /locus_tag="ACFJCW_000773"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HFC4150972.1"
                     /translation="MTNIRIGQGYDVHQLIEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(13457..14146)
                     /gene="ispD"
                     /locus_tag="ACFJCW_000774"
     CDS             complement(13457..14146)
                     /gene="ispD"
                     /locus_tag="ACFJCW_000774"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HFC4150973.1"
                     /translation="MKRKNIALIPAAGIGVRFGADKPKQYVEIGSKTVLEHVLGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLETGLAAET
                     DNILVHDAARCCLPSEALARLIEQAGNAAEGGILAVPVADTLKRAESGQISATVDRSG
                     LWQAQTPQLFQAGLLHRALAAENLDGITDEASAVEKLGVRPLLIQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(14143..14877)
                     /gene="dnaQ"
                     /locus_tag="ACFJCW_000775"
     CDS             complement(14143..14877)
                     /gene="dnaQ"
                     /locus_tag="ACFJCW_000775"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HFC4150974.1"
                     /translation="MMTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEEKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGETEEEEPTAKPVASAEMKLGAKLKVIKADEAELAAHE
                     EYLDGLGEACIWRKEAVPSENGGENA"
     gene            complement(15033..16343)
                     /locus_tag="ACFJCW_000776"
     CDS             complement(15033..16343)
                     /locus_tag="ACFJCW_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC4150975.1"
                     /translation="MDAKKGGLGLVKSRRFGPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGVLPAGQMLNLGALLFILPYFLFSALSGQLGNKFDKAVLARWVKVLEIIIMAV
                     AAYGFYIRSAPLLLLCLFCMGAQSTLFGPLKYAILPDYLDDNELMMGNSLIESGTFVA
                     ILFGQILGTAVAGAPPYIVGILVLLVAVGGTAGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRHNPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFGRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLAVFLIKRERRFLGAAAIRKKP"
     gene            complement(16333..16518)
                     /gene="ccoS"
                     /locus_tag="ACFJCW_000777"
     CDS             complement(16333..16518)
                     /gene="ccoS"
                     /locus_tag="ACFJCW_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HFC4150976.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKEKENDGR"
     gene            complement(16518..16817)
                     /locus_tag="ACFJCW_000778"
     CDS             complement(16518..16817)
                     /locus_tag="ACFJCW_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150977.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARLQSGRFAVKLEDGTGN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLIGNM"
     gene            17168..18364
                     /locus_tag="ACFJCW_000779"
     CDS             17168..18364
                     /locus_tag="ACFJCW_000779"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HFC4150978.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELEAHGLDSRIGAIGHRVVSGGELYNESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETAHFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITDMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTADSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            complement(18414..18536)
                     /locus_tag="ACFJCW_000780"
                     /pseudo
     CDS             complement(18414..18536)
                     /locus_tag="ACFJCW_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(18878..20719)
                     /locus_tag="ACFJCW_000781"
     CDS             complement(18878..20719)
                     /locus_tag="ACFJCW_000781"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HFC4150979.1"
                     /translation="MRTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELTVADDGVNVRFRIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVHHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDGRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPAFMLLVNGRRQKRRPKA
                     VAFALGSILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKFSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAVYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRADGSRSEPLLGFVKADKFIEWYEQNR"
     gene            20810..21280
                     /locus_tag="ACFJCW_000782"
     CDS             20810..21280
                     /locus_tag="ACFJCW_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HFC4150980.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLGALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     PEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            complement(21353..22165)
                     /gene="hpnC"
                     /locus_tag="ACFJCW_000783"
     CDS             complement(21353..22165)
                     /gene="hpnC"
                     /locus_tag="ACFJCW_000783"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HFC4150981.1"
                     /translation="MSVGHYENFPVGSLVLPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLSGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYAHFGDLTDYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEEQIAAGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(22252..22734)
                     /locus_tag="ACFJCW_000784"
     CDS             complement(22252..22734)
                     /locus_tag="ACFJCW_000784"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC4150982.1"
                     /translation="MAIAKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSSDDAFGEQDSELVRIEDAGAFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGSHGHYHH
                     "
BASE COUNT         5434 a         6767 c         5605 g         5029 t
ORIGIN      
        1 gcacaaaggg cgggcatata cagcgggaat ccgttttttg agtttcgctt aagttcaata
       61 aatcctgaaa ctttaatctc gccgtgaaaa tgaattttct atttcaattt gtcatatata
      121 gttaattttt tagggtattt tattttttgt tccaaagtca aaatatgccg tccgaacgtt
      181 cgggcggcag acaaaacggc actgcccgat aaaggcagtg ccgttgtccg ttttaaaccg
      241 tgaaacatca gcccaaatca aaggctttat gcaataccct ggttgccagt tccatgtatt
      301 tttcgtcaat caatacggaa actttgattt cggaggtgga aatcatttgg atgttgatgc
      361 cctcttcggc gagcgtgcgg aagattttgg cggctacgcc gacgtgcgaa cgcataccca
      421 aaccgactgc ggagactttg cacacggtgt cgtcgccgtc gatagaagct gcgccgatac
      481 tgtctttacg ttccgacagg atttccaaag tctgtttgta atcgccgcgc ggtacggtga
      541 aagaaaaatc ggttgtgcct tcgctgccga cattttggat aatcatatcg acttcgatgt
      601 tggcatctgc gaccgcgccc aaaatctgat aggcgacgcc gggcttatcg ggcacaccgc
      661 gcacgttgat gcgggcttgg tttttatcga atgcgatacc ggttacggca gctctttcca
      721 tgttgtcgtc ctcttcaaag gtaattaagg tgccgttgcc gccgtcttgc aggctgctca
      781 gtacgcgcag gcgcactttg tattttccgg cgaattctac tgaacggatt tgcaaaactt
      841 tcgaaccgag gctggccagt tcgatcattt cttcaaatgt aaccgtatcc atacggcgcg
      901 cttcgggtac gacgcggggg tcggtggtgt aaacgccgtc tacgtcggta tagatttggc
      961 attcgtccgc tttgagggct gcggcaagcg caacggcgga agtgtcggaa ccgccgcgtc
     1021 ctagcgtgga aatattgcct tcactgctga tgccttggaa gccggcaacg atgacgactt
     1081 tgccggcggc gaggtcggcg cgcatttttt cgtcatcaat gctttctatg cgggctttgg
     1141 tgtgggcggt atcggttttg agggagacct gccagcctgt gtagcttttg gcatccacgc
     1201 cgatatcctt caatgccatt gccaaaaggc cgatggttac ttgttcgccg gtagctaaga
     1261 cgacgtccag ctcgcgcgga tcgggatgct cctgcatttc gtgcgccaac gcaaccagac
     1321 ggttggtttc gccgctcatg gcggatacga cgacgacgat atcgtgtcct tcggcgcggg
     1381 ctttagcgac acgtttggcc acgtttttaa tgcgctcggg cgagcctacg gatgtgccgc
     1441 cgtatttatg tacgattaac gccatgtttc atgctttctt gtgtgggatt ggtcgggcag
     1501 catggtttgc tggaaaagcg gctattatta ctatttttta catgaagttc aagaacggac
     1561 tgcgctttcc cgcctgccgt ttgacagcgg tcagcgaaaa acctgttctt tcagattttt
     1621 gacaaaatgc cgtctgaacg gttttcagac ggcatacgga cagtaattaa gcaacggaca
     1681 acgcattttg ctgataacgc agcagttcgc ctatgccttt ttgcgccagt gcaaccagtt
     1741 tgcccaactc gtccaaactg aatggcgcgc cttccgccgt tccctgtatt tcgatgattt
     1801 tccccgatgc ggtcatgacg atgttcacat cactgtcgca gccggagtct tcgggataat
     1861 ccaaatccaa aagcggcacg ccgttcacta cgcccgctga tacggcggca acagcttcga
     1921 ggatggggtt ttcactcaaa atgccgtctg aaaccagttt gccgacggcg atttgcagcg
     1981 cgacaaacgc accggtaatc gaagccgtac gcgtgccgcc gtccgcctga atcacatcgc
     2041 aatcaatcag gatttgtcgt tcgccgagtt tttccatatc cacgaccgcg cgcagcgaac
     2101 gcccgatcaa gcgttggatt tcttgtgtgc gtcccgactg tttgcccgcc gaagcttcgc
     2161 ggcgcatacg caaagcggtt gaggcaggca gcataccgta ttccgccgtt acccagcctt
     2221 ggtttttgcc gtgcagaaac ggtggggcat tttcgtccac ggaagcggta caaatcactt
     2281 tggtattacc gcattcaata aggcacgaac cgtccgtatg cggcaggaaa tgaggggtga
     2341 ttttgatatc gcgcaggctg tcggcggcgc gtgaggtgcg gatataatca ggcatactgc
     2401 cctcccgtta aaaacagata aattaaaaag ccttaaatat gaaaaatcac atttaaggcc
     2461 ttcaaactga aaatttctac gcctcttcgg ctttgctacg gataatcaaa agcggcaggt
     2521 ggctttggcg cattaccgtt tcggcgaaac tgcccatcaa aaggtgcatc agcccggtgc
     2581 gcccgtgcgt gcccaacacc agcaggccgg caccgttttc atcggcataa tcgaccaaat
     2641 cctgcgccat ttcgcgcgca cccttattgg caaccagcag gtgtttgacg gtatttccca
     2701 cacccagttc ccgggcggtg cgctcggcgg catccaaaac ctcgttgcct tgcgcgacgg
     2761 cggcggcctc gtaactttcg tgttgcaaaa attcgggggc gagcgccata tattcggcag
     2821 ggttggcaac gtgtaccaaa gtcagacgcg caccgttgac cccggcaagc tcggcggcgt
     2881 gtttcagggc attgatggac gtttcactgc cgtcaacggc aacgaccaga tgtttgtaca
     2941 tatcgtattc tccttttgca ccgtctcacg gtgccgtctc ttcaggtttg cgcaaaggca
     3001 gtctgcgccg tttcattata gacccgccgt cgggctttat acaacagccg aacagcctga
     3061 ctgctttcca gtataatatg ccgctttcgt gcagtcaggc attttttgcc ggctttcgtt
     3121 cactttttga tttgacgcaa tcttgcagga ttcgaccatg tccgacaacg ctttgacctc
     3181 ttcgcgacgc ttcggcggca tcgccagact ctacggagac tctgccttga cgcacttttc
     3241 acaggcacac gtctgcgtgg tcggcgtggg cggggtcggc tcgtgggcgg tcgaggcttt
     3301 ggcgcgcacg ggcatcgggc gtttgacttt gattgatttg gacaacgttg ccgaatcgaa
     3361 tgtcaaccgc cagctgcacg ccctgaccgg cgacttcggc aaagcaaaag ttaccgcctt
     3421 gcgcgaacgt attacacaaa tcaatccgca atgcgaagta tttgaaattg aagatttcgt
     3481 taccgaagac aatttgccgg aatacttcgg aaaaggtttt gatttcgtca tcgacgcgat
     3541 cgaccaagtg cgcgtcaaag cggcaatggc ggcttatttt gtggaacgca aacaaccgtt
     3601 tgtcctcagc ggcggcgcgg gcggacagaa aaatcccgcc ctgattcaaa ccgccgattt
     3661 aagccgcgta acccacgacc cgctgcttgc caacctgcgc tacaccttgc ggaaacgcta
     3721 cggcttcagc cgcgatacta aggaaaaaat gcgcgtgccg tgcgtgtatt cgaccgaaaa
     3781 tatcatgccg ccgcaatcgg gcgcagcgtg ttctgccgat gccgcgccgc agggcttgtc
     3841 atgcgccggc tatggcgcaa gtatgctcgt taccgcttcg ttcggactgt attgcgcaca
     3901 gggggcggtg gaacacatcg cgggcaaaaa ataagcaatg ccgtctgaaa caggattcag
     3961 acggcatttg aacaaacgcg gcaatcaagc tgtcggttca gaaaaaccaa catcggcacg
     4021 cctaaaaccg tattcacaat ctactccttt tcaaaatatt tgcatttaaa agccgttata
     4081 atgccgtccg aacatctgcc cgaccacatt atgcgtgaat gccggcagat tgttttcttt
     4141 tgtaaactta tattaaaatt cacttaccaa ttcacgccat gccgcccatc cctgccctat
     4201 ccgcaccatc cgagcacact gtcgcatggg tattcggcca acccgttacc gatttgccgc
     4261 aggatttgtt tatcccgccc gacgcgctga aagtcgtatt gggcagtttt caaggccctt
     4321 tggatctgct gctctacctt atccgcaagc agaacatcga tgttctcgat attccgatgg
     4381 tggaaattac cgggcagtat ctgcactata ttgcccaaat ggaagcctat cagtttgatt
     4441 tggcggcgga atatcttttg atggcggcaa tgctgattga aatcaaatcg cgcctgctgc
     4501 tgccgcgtac cgaagccgtc gaagacgaag aggccgaccc gcgtgccgag ttggtgcgcc
     4561 gtctgcttgc ctacgagcaa atgaaactgg cggcgcaggg tttggacgcg ctgccgcgtg
     4621 cgggacggga tttcgcgtgg gcttacctgc cgctggaaat tgcagctgag acgaagctgc
     4681 ccgaggttta catcgccgat ttgatgcagg catggttggg cattctttct cgggcaaaac
     4741 atacgcgcag ccacgaagta atccaagaaa ccctttccgt gcgcgcgcaa atgacggcaa
     4801 tcctgcgccg tttgaacgaa cacgggatat gcaggtttca cgacctgttc aatcccgaac
     4861 agggcgcggc ttacgtgatc gtcaacttca tcgccctgtt ggagcttgcc aaagaaggat
     4921 tggtcggaat cgtacaggaa gacggtttcg gagaaatccg aatcagcctc aatcatgagg
     4981 gggcgcattc agacggcatt ttcggcacac ggggcgggcg cgatgtgttc taatacgccc
     5041 caagccgcca ccagaaatcg ggagacacgc catatgaccg gcatcataca ttcgctgctc
     5101 gacactgacc tctacaaatt cactatgctg caagtagtcc tgcaccagtt tccgcagacg
     5161 cacagccttt acgaattccg ctgccgcaac gtctcgaccg tctatccgct tgccgacatc
     5221 agggaagact tggaagccga actcgacgcg ctctgccggc tgcgcttcac ccacgacgaa
     5281 ctcggctatc tgcgctccct gcgtttcatc aaaagcgact ttgtcgatta tctcgaactc
     5341 ttccagctcc aacgccgctt tgtcgaagtc ggcacagacg ataaaggccg tctgaacatc
     5401 cgtatcgaag gcccgatgat acaggcgatg ttttttgaaa tcttcatcct cgccattgtc
     5461 aacgaacttt acttccgccg gctggaaacc cctgccgtta tcgaagaagg cgaacgccgg
     5521 cttcaagcca aagccgcgcg cctgaaagaa atcgccgccg cacagaatcc ggacgaaccg
     5581 cccttcctga tttccgactt cggcacgcgc cgccgctaca agctcgcgtg gcaggaacac
     5641 gtcatccgca ccctgctcga agccgcccca agcatcgtgc gcggcacaag caacgtttac
     5701 ctcgccaaaa aactcggcat cacccccatc ggcaccatgg cgcacgaatt cctccaagcc
     5761 ttccaagccc tcgacgtgcg cctgcggaat ttccaaaagg ccgcgctcga aagctgggtg
     5821 cacgaatacc ggggcgattt gggcgtcgcc ctgaccgacg ttgtcggtat ggatgccttc
     5881 ctgcgcgatt tcgacctcta tttcgccaaa ctcttcgacg ggcttcgcca cgacagcggc
     5941 gacccttacg tttggggcga caaagcctac gcccactatc aaaagctcaa aatcgacagc
     6001 cgcaccaaaa tgctgacctt ctccgacggg ctggacatcg aacgctcttg ggcattgcac
     6061 caatatttca aaggccgctt caaaaccggc ttcggcatcg gcaccaacct caccaacgat
     6121 atggggcata cgcccttgaa tatcgtgttg aaactggtcg aatgcaacgg gcagtccgtc
     6181 gccaagctct ccgactcgcc gggcaaaacc atgaccaaca acagcacctt cctcgcctac
     6241 ctgcgccaag tgttcggcat acccgaacct agaacgccgt aaaccggcag aaaaagcgta
     6301 caattcctgt ttccgccgca taaaatcttt taaaataccg cctgatttga atttaaccga
     6361 aagaccgaac ttcatgaacc tacatcaaac cgtcgaacac gaagccgccg ccgcctttgc
     6421 cgccgcaggc atcgccggca gccccgttgt cttgcagccg accaaaaatg ccgagcacgg
     6481 cgatttccaa atcaacggcg tgatgggggc ggcgaaaaaa gccaaacaaa atccgcgcga
     6541 actggcgcaa aaggtcgccg acgcattggc gggcaacgcc gtcatcgaaa gcgcggaagt
     6601 ggccggtccc ggctttatca acctgcgcct gcgtcctgag ttcctcgccc aaaacattca
     6661 gacggccttg aacgacgcgc gtttcggcgt agcgaaaacc gacaaaccgc aaaccgtcgt
     6721 catcgactat tcctcgccca atctggcgaa ggaaatgcac gtcggccatc tgcgttccag
     6781 catcatcggc gacagtattt cgcgcgtgtt ggaatttacg ggcaacaccg ttatccgtca
     6841 aaaccatgtc ggcgactggg gtacgcaatt cggcatgttg gttgcttatt tggtcgagca
     6901 gcagaaagac aatgccgcgt tcgagctggc ggatttggag cagttttacc gcgccgccaa
     6961 agtgcgcttt gacgaagacc ccgcctttgc cgacaccgca cgcgaatacg ttgtgaagct
     7021 gcaaggcggc gatgaaaccg tgttggcgtt gtggaaacag tttgtcgata tttcgctctc
     7081 gcacgcccaa gccgtttacg acacgctggg cttgaagctg cgccccgaag atgtggcggg
     7141 cgaatcgaaa tacaacgacg atttgcagcc tgtagccgat gatttggttg aaaaaggcct
     7201 ggcggttgag gacgacggcg cgaaagtcgt gttcttggac gagttcaaaa acaaagaggg
     7261 cgaacccgcc gcatttatcg tgcaaaaaca aggcggcggc ttcctttatg cttccaccga
     7321 tttggcgtgc ctgcgctacc gcataggccg tctgaaagcc ggccgcctgc tgtacgtcgt
     7381 cgaccaccgc caagccctgc acttcgagca actctttacc acttcccgca aagcaggcta
     7441 tctgcctgaa aatgcaaaag ccgagtttat cggcttcggc accatgatgg gcaaagacgg
     7501 caaaccgttc aaaacgcgca gcggcgacac cgtaaaactg gttgacctgc tgaccgaagc
     7561 cgtcgagcgc gccaccgctt tggtgaaaga aaaaaatccc gaattgggcg cggatgaagc
     7621 cgccaaaatc ggcaagaccg tcggcatcgg cgcagtcaaa tacgccgatt taagcaaaaa
     7681 ccgcaccagc gattatgtgt tcgactggga cgccatgctc tcatttgaag gcaacaccgc
     7741 cccctacctg caatacgcct acacccgcgt gcaaagcgtg ttccgcaaag ccggagaatg
     7801 ggacgcaacc gcaccgaccg ttttgaccga accactggaa aaacagcttg ccgccgagct
     7861 tctgaaattt gaaaacgtgc tgcaaagcgt ggcggacacc gcgtatccgc actacctcgc
     7921 cgcctacctt taccaagccg ccaccctgtt cagccgcttc tacgaagctt gcccgatttt
     7981 gaaagccgaa ggcgcaagcc gcaacagccg cctgcaactg gcaaaactca ccggcaacac
     8041 gctgaaacaa ggcttggatt tgctgggcat cgatgtgttg gacgtaatgt aaaaccgcac
     8101 cgcccgattg cggacaacag ccctgcaatc aaccggcgga ccatcctcat ccgaatctga
     8161 aaaaagcggc gcgatacacc gtatccgccg cccctcccaa aatgcgaaac agacaaacgc
     8221 caagcaagca agcaagcaag caagcaagca agcaagcaag caaaaaatta taacccccct
     8281 tcctgccgac gcacgcactt tccgcgcggc ttattcccct tttcccgccc ctcaaacccg
     8341 ccttttcttc aggcagggtt tcagcccgcc tcctttccct gttttccttc cctcaacacg
     8401 cgtgcgcgcc cctgccgcac cgtgccgcgc ttttgcgccc ggacggcatc gttccgccat
     8461 ccggttctct gtttcaaata cccctgtttc agaaagaaat gcagatgttt caacacacag
     8521 gacgacatat aaagtaccgc cctatgtgtc gtcctgattt ggaaggggtt gcgccccttc
     8581 ctaaatatag tctgatcctg ccgccccgaa ggacagatgt ccgagtggcg gggtttcaac
     8641 cgaaaaggaa atacgatgaa tattcacgcc ctgctctccg aacaatggac actgccgcca
     8701 ttcctgccga aacggctgct gctgtccctg ctgatactgc tggtccccaa tgcggtgttt
     8761 tgggttttgg cactgctgac cgccaccgcc cgcccgattg tcaatttgga ctaccttccc
     8821 gccgcgctgc tgatcgccct gccttggcgt ttcgtcaaaa ttgccggcgt attggcgttt
     8881 tggccggcgg ttttgtttga cgggctgatg atggtgatcc aactcttccc ttttatggac
     8941 ctcatcggcg ccatcaacct cgtccccttc atcctgaccg cccccgcccc ttatcagata
     9001 atgaccgggc tgttgctgct gtatatgctg gcgatgccgt ttgtgttgca aaaagccgcc
     9061 gtcaaaaccg acttccgaca cattgccgtc tgtgccgccg ttgtggcggc agccggctat
     9121 ttcaccggcc atttgagtta ctacgaccgg gggcggatgg ccaatatctt cggcgcaaac
     9181 aacttctatt acgccaaaag tcaggcgatg ctctacaccg tcagccagaa tgccgacttt
     9241 attaccgccg gcctggtcga ccccgtcttc ctccccttgg gcaatcagca gcgtgccgcc
     9301 acgcggctga gtgagccgaa atctcaaaaa atcctcttta tcgtcgccga atcttggggg
     9361 ctgccgggca atcccgagct tcaaaacgcc acttttgcca aactgctggc gcaaaaagac
     9421 cgtttttcgg tttgggaaag cggcagtttt cccttcatcg gcgcgacggt cgaaggcgaa
     9481 atgcgcgaat tgtgcgccta cggcggtttg cgcgggttcg cactgcgccg cgcacccgac
     9541 gaaaaatttg cccgctgcct ccccaaccgt ttgaaacaag aaggttacgc cacctttgcg
     9601 atgcacggcg cgggtagttc gctttacgac cgcttcagct ggtatccgag ggcgggcttt
     9661 caaaaaatca aaaccgccga aaacctgatc ggtaaaaaaa cctgcgccat tttcggcggc
     9721 gtgtgcgaca gcgagctgtt cggcgaagtg tcggcatttt tcaaaaaaca cgacaaggga
     9781 ctgttttact ggatgacgct gaccagccac gccgactatc ccgaatccga cattttcaac
     9841 cacaggctca aatgcaccga atacggcctg cccgccgaaa ccgacctctg ccgcaatttc
     9901 agcctgcaca cccaattctt cgaccaactg gcggatttga tccgacgccc cgaaatgaaa
     9961 ggcacggaag tcatcatcgt cggcgaccat ccgccgcccg tcggcaacct caatgaaacc
    10021 ttccgctacc tcaaacaggg acacgtcgcc tggctgcact tcaaaatcaa ataacaacaa
    10081 tgccgtctga acgcaccaac agccttcaga cggcattttg cagacagacc gacctcctca
    10141 agcccacttt tttcatcatc tccgataaat tgctttgtaa gaatccaaaa atccaaaatc
    10201 acaggaagtt atcaaaaaaa cagaaaccat ccgccgtcgt tcccgcgaaa gcgggaatcc
    10261 agacccggaa accgcagaaa tttatcggaa aaaccgaaac tcgaaaacaa cggacagaat
    10321 tcccgcctgc gcaggaatga cggctcatac atcacccaaa aaaaattgaa accaaacagc
    10381 tgggattccc tcttgcgtga ggctgacaga tgccgtctga aagactttca gacggcatag
    10441 ggcgttttct ctttgaattt aaattttgcc acaaaaaagc cgccccaaat gaatacccgg
    10501 gcagcttttt gttgatatga ctccaatcag cggtgttgcg gattgtaacg tttttccaaa
    10561 cgcaggaata tccagcctaa gaaagtcgtc atcaacagat aaatcagggc ggcggtgtaa
    10621 agcggttctt cataaaccga ataccggccc gtaatcgtat tctgaacata cgccaactcc
    10681 gccacagcaa tgaccgacag cagcgagctg tctttcaaga gcgtgatgaa ctcgctcgcc
    10741 aaaggcggca gcatacggcg caatgcctgc ggcagaatca catagcgcat cgcctgcgga
    10801 taggtcagtc ccaaagaaca cgccgcctcc atctgtcctt tgtctataga ctggatgccc
    10861 gcgcggaaaa tctcacagat atacgccccc gagttggcga tcagtgccaa agaaccggca
    10921 atcagcggcc cgtatccgcg acgcagcgcg attgccgcct cgccgctgac caaaatgccg
    10981 tctgaaggat ggacgaaaaa cggaaaccac acatacgccc aaatcacaat ctgcacaaac
    11041 agcggcgtac cccggaacag ggtaacgtac agcagcgaaa ccttacgcaa cgcccacgcc
    11101 agcacgcgca tcggcgcacc ggctttttcc aagtgaatca ggcgcgccaa cgccaacaac
    11161 agacccaata ccgaaccgcc cgccgtcgcc acgaccgtca gccccaaggt cgtcagtgcg
    11221 ccgtaaagaa acatccagcg gtattcgtaa ataatgtcaa aacgaaaatc cataaaccgt
    11281 ccgtatcaaa aaccggcgga actgccgccg ttgcaaaata atccgccatt ttaccgtaaa
    11341 aaccgccgcc tgaacttttt tatcgcggca gacggcggtt gcgcgtctcc gcaaaaatgc
    11401 agggcgcgcg gttttcagac ggcatttgcc gttcaaggcc gtgcggtgtc tttaccaaat
    11461 gcccaaccat tcgcccacgg aatccatcca atccttattg cccccgccgc tcctgcctgc
    11521 ccggcggtac gcccacggcg cttgcggatt tttagctttc cacaatcctt tgcgttccct
    11581 ttccgcctga atttgagcgt cggcatagtc ggcaaaatcc gccttatcct gctgttcttt
    11641 agcataactt ttataatgcc acgccgcccc gtcctgcacc tgcatcaggt tcaaatcggt
    11701 tttgccggcg gatacctgcg ccacttcgcg ctgatagcgg tcggtttcaa acacacgtac
    11761 actgactttc ctaccctccg ccgccgcgcg caggttgtcg cgcgaacgtg taccgtaagc
    11821 ctgtttcatc tccggtgcgt cgatatacgc catccgaatt ttatgtttcg cgccgtcgcc
    11881 gtcgatgacg tgaagggtat cgccgtcata gactttggac accgtgcctg tgtagctgtg
    11941 gccggatttc gccgatgccc ggcggcgaac gggtgtttcg tacctacccg cactctcctc
    12001 tacacccaat tcattcagta cggcaatacc ggtacggaca agctcgctgt cgtatcccgt
    12061 ataacccaac gcgcccaaaa gcgacagggc gacgggaagc catttcatga tttttttaat
    12121 ctgcatattt ttcaaatgcc gatgccgtct gaacatctct gaaccggatt tcagacggca
    12181 tcttaacgtc aggattaccc ttggcaggga tagatgactt tcgcaccctc ttccgtcccc
    12241 aaaatcaaca catcggcggc atcgcgggcg aatatgccgt tttcgagtac gccggtgatt
    12301 ttgttgattt catcttccat cgtcagcggc tgatcgatat tcaagccgtg gacatcgacg
    12361 atttggttgc cgtaaaacgt ggtgtagccg atacgcagtt cgggctgtcc gcccatggca
    12421 agcagtttgc gcgaaacaag ggagcgcgcg ctttcgacga cttccacggg cagtgggaat
    12481 ttgcccagcc gggaaacata tttgctttcg tccgcaatgc agacgaattt ttctgatgcg
    12541 ctggcgacga ttttttcgtt gaggtgcgcg ccgccgccgc ccttaatcat ttgcagggcg
    12601 tggttcactt cgtccgcacc gtcgatatag accgccaaac cggacacttc gttcagggaa
    12661 acgacgggaa tgtcgtaccg ggcaagcagt tcgccggatt ttttggaggt tgaaaccgcg
    12721 cctttgattt ttttaccgct tttgcccaag gcttcgatga agaaattgat ggtcgaaccg
    12781 gtaccgatgc cgatgtattc gttttcgggt acgaattcga ctgttttttc ggcggcgatg
    12841 cgcttgagtt cgtcttgtgt cgtcatattt ttatcctttg ggaaaccgta tcaacaaaca
    12901 gccgccatct taacattttt ttgcacgtcc tgcccgccgc gttcaaatcc gtaccagcaa
    12961 taccgccgcc tgcgcctcta tgccttccat ccgcccgaga tagccgagtt tttcgttggt
    13021 tttgcctttg atattgacgc acgaaatatc gatacccaaa tcggcggcga tgttggcacg
    13081 catttgcgga atgtgcggtg cgagtttggg tttctgtgca atcacggtcg tatcgacatt
    13141 gaccgcctgc caaccctgcg cctgaacgct ttgatacgcc gcacgcaaaa ggacgcggct
    13201 gtccgcatct ttgaactctg cggcggtgtc gggaaaatgg ctgccgatgt cgcccaaacc
    13261 tgccgcaccg agcagcgcgt cggtaacggc gtgcagcagc gcgtcggcat cggaatgccc
    13321 gagcagccct ttttcaaatg ggatttcaac tccgccaagt atcagctttc tgccttcgat
    13381 caattggtgg acatcgtagc cctgtccgat acggatattc gtcatcgttt gtgttcctga
    13441 tgttttgaat tgaatttcag acggcattga gcagcagcct gacgatgtat gcgtcctgcg
    13501 gctgcgtcag tttcaaattg cgcgcgtcgc cctgtatcag tagcggacgc acacccagtt
    13561 tttccacggc ggacgcttca tcggtaatgc cgtccaagtt ttccgcagcc aatgcgcggt
    13621 gcagcaaacc cgcttgaaaa agctgcggcg tttgcgcctg ccaaagcccc gaacggtcga
    13681 cagttgcact gatttgtccg ctttctgcgc gcttgagcgt atcggcaacg ggaactgcca
    13741 aaatcccgcc ttcggcggcg ttgcccgcct gttctatcaa ccgcgccaga gcttcagacg
    13801 gcaggcagca gcgggcggca tcgtgtacca gaatattgtc ggtttccgcc gccaaaccgg
    13861 tttccaacag ttttgccaca ccgttgcgga cagtttcggc gcgggtctgt ccaccgtttt
    13921 tccacacccg aacctgtgga aatgccgtct gaaccttatc ggcaaacgtg tcttcgggcg
    13981 agacgacaac gacggtcaaa tcgacggcct catgccgttc aaaaatccca agtacatgtt
    14041 ctaaaacggt tttgcttccg atttcgacat attgcttggg tttgtccgca ccgaaacgca
    14101 ccccgatgcc ggcggcggga atcagcgcga tatttttgcg tttcatgcgt tttccccgcc
    14161 gttttcagac ggcacggctt ccttacgcca aatacaggct tcgcccaagc cgtcgagata
    14221 ttcttcgtgc gccgccagtt cggcttcatc cgccttaatc actttcagtt tggcaccgag
    14281 tttcatttcg gcagatgcaa caggtttggc tgtcggttct tcctcctcgg tctcccccat
    14341 caagtcgaat tgccgccgcg tcatcgccag atagacttcg cccaaaagtt cgcagtcgat
    14401 caatgcgccg tgcaggacgc gcttgctgcg gtcgacggaa aaacggttgc acagggcatc
    14461 caggctcgct ttctgccccg gaaacatttc gcgcgccatc gccagggtat cggtaacggt
    14521 gcagccgagt tcctcgacgg tcggcagccc catccggcgg aactccatat tgaggaagcc
    14581 cacatcgaat ttggcattgt ggataatcag ttccgcaccg cgcagaaaat cggcaatctg
    14641 cctgccgacc tctgcaaacg gcggcgcgtt tttctcttcc aaaacctgta tcgtcaagcc
    14701 gtggacgcgt gccgcctctt cgggcatatc gcgctcgggg tggacataga ggtgcaggtt
    14761 tttgtcggtc atttggcggt tgaccatttc cagaccggca aactcgacca gacggtcgcc
    14821 gccgtcggca tacaggccgg tggtttcggt atcgaggatg atttggcgtg tcatcatatc
    14881 ggtgtctttc ttctgtcttc gtaaattgat tattttttaa gcaatgtatt tttctgtttt
    14941 catttcaatg cacaaaccca cttattcaca gtgtgttcac aacattgggc aggcggattg
    15001 tgtattttgg ggacaatttt tccagacggc attcaaggtt ttttcctgat tgccgccgcg
    15061 cctaaaaacc gcctttcgcg cttaatcaaa aataccgcca acggaatatt gcccaaggcg
    15121 acaatcagat acagcaggga aatgctgtca aacaaaaaca gcaataccgc gctcaaaacg
    15181 gcggcggaaa ccataaagat gccgttaacg atattgttgg cggcaacggc gcgggcgcgg
    15241 aaagtctcgc tgctggcggt ttgcagccag gtatagagcg gaacggagaa aaatccgccg
    15301 aaaaagccga tcagcgtcat caccgccatc acggggtatg cccatccttg cgataaaaac
    15361 caaaaaatgc cgttcagccc ttcaaaacgg tgtccgtgcg tcagccacac caaaaccagg
    15421 ccgcaaaccg tcaaacccaa cgcaccaacc gttacccaag ccaacatcag ccgttccctg
    15481 ccgaacttgg cacacagtac cgaaccggcg gcaataccga tggaaaacaa agcaagcatc
    15541 aggttaaaaa cattatcgtt gccgcccaaa tggatttggg taaaggtcgg cagttgcgtg
    15601 gtataaaccg cgccgacaaa ccaaaaccac gagatgccga taatggcggt aaaaacggga
    15661 ttgtgccgca ccgtttcacg cagcagggat tttgtaccac ggacaatatt ccactcgatt
    15721 tgggtatcgg cagccttggc gggtacggac ggcataaaca ggctgccggc cgttcctccg
    15781 acggcgacca gcaaaaccag tatcccgaca atataaggcg gcgcgccggc aaccgccgtt
    15841 cccaaaatct gaccaaacag gatggcgaca aacgtaccgg attcaatcag gctgttgccc
    15901 atcatcagct cgttgtcgtc gagataatcg ggcagaatgg catatttaag cgggccgaac
    15961 agcgtcgatt gcgcgcccat gcaaaacaga cagagcaaga gcagcggggc tgaccggata
    16021 taaaacccgt atgccgccac cgccataatg atgatttcca gcaccttgac ccaacgcgcc
    16081 aaaacggcct tgtcgaattt gttacccaac tgccccgaca gcgcggaaaa caggaaatac
    16141 ggcaaaataa acagcagtgc gcccaagttc aacatctgtc cggcaggcag aacgccgttt
    16201 tgccccaaac cgtaaaaccc gatcatcaca aacagcgcgg ttttgaacac attgtcattg
    16261 aacgcgccga gaaactgcgt agcgaaaaga ggcccgaaac ggcggctttt aaccagtccc
    16321 aaaccgcctt ttttagcgtc catcgttttc cttctctttt tcaatcagtt tacttgtcga
    16381 atcatcatcc atcaaaatgc ggtgcgccgg tccttccaaa tcgtcaaact gtccgttttt
    16441 gcccgaccac cagaaaaacc agccgatgac aaatgccaaa ataatgctga tgggcaccag
    16501 aataaacata ctttccatca catattccct atcaaatcgt tcaaaacaaa agtctgccct
    16561 gacacggtca gatattcgtt acgcaaagtt ccgacggggg cttcgtcaaa aaacagctcg
    16621 atacggtctt tgaccacgcg ccaatattgg ggaatttccg tctgaccgaa cggcgacagg
    16681 acatggttgc ccgtcccatc ttccaattta acggcaaaac gcccgctctg cagccgtgct
    16741 tccgattcgt cgtcggcaag aaggatgaaa aagcctatat gccgtcccga ttggtcatga
    16801 atactgaaat aatgcataaa ttccccaccc gccttttttc agacggcatc aactaaaaac
    16861 agggcgaatg taccagtttg gacgggaaaa atgcaaagaa attctccctc ccccagccga
    16921 aaacaccggc aaaccgcata tccccctttt ttccgtcaaa atacccgact tccgccattt
    16981 tcacgcaaac gcccgattaa gccaagcaat tgcaaagatt ttttgctaga atagcctgct
    17041 tcttttatca accgtttcag acggctccac tactttcccg tcaaggaaag caaagcggat
    17101 tcggcacgaa tccgattagt atccgtgtcc gattccaatg ccgtctgaaa ctttccggag
    17161 taagaaaatg tcccaaaaat tgatcttggt tttgaactgc ggcagctcgt ccctcaaagg
    17221 cgcggtcctg gataacggca gcggcgaagt cctgctgagc tgccttgccg aaaaactcaa
    17281 cctgcccgat gcctacatta cattcaaagt aaacggcgaa aaacacaaag tcgatctgtc
    17341 cgcacacccc gaccacaccg gcgcggtcga agccctgatg gaagaactcg aagcccacgg
    17401 cctcgacagc cgcatcggcg ccatcggcca ccgcgtcgtc agcggcggcg aactgtacaa
    17461 cgaatccatc ctcgttgacg acgaagtcat cgccggcatc gaaaaatgca tcccgctggc
    17521 tcctctgcac aatcccgccc acctcttggg cctgcgtgcc gcgcaaagca ttttcaaagg
    17581 cctgcccaac gtcgtcgtat tcgatacctc cttccaccaa accatgcccg aagtcgccta
    17641 caaatacgcc gttccgcagg agttgtatga aaaatacggc ctgcgccgct acggcgcgca
    17701 cggtaccagc taccgcttcg ttgccgacga aaccgcgcac ttcctcggca aagacaaaaa
    17761 agacctgcgt atggtcattg cccacttggg caacggcgca tccatcaccg ccgtcgccaa
    17821 cggagaatcg cgcgacacca gtatgggcct gaccccgctg gaagggctgg taatgggtac
    17881 gcgcagcggc gacatcgatc cttccgtatt cggcttcctc gccgaaaacg ccaatatgac
    17941 cattgcccaa atcaccgaca tgctgaacaa aaaatccggc ctgctcggca tttccggcct
    18001 gtccaacgac tgccgcacca ttgaagaaga agccgccaag gggcataaag gcgcgaaatt
    18061 ggccttggat atgtttatct accgccttgc caaatacatc ggcagtatgg cggttgccgc
    18121 aggcggcttg gacgcactgg tctttaccgg cggtatcggc gaaaactccg acatcatccg
    18181 cgaacgcgta atcggctact tgggcttcct cggtctgaac atcgaccaag aagccaacct
    18241 gaaagcccgc ttcggcaacg ccggcgtgat taccactgcc gacagcaaag ccgttgccgt
    18301 ggtcattccg accaacgaag agctgatgat tgcccacgat accgcccgtt tgagcggtct
    18361 gtaaggtttt atcctcacgc gaactgcctc cggaaacgga ggcagttttt ttatagtgga
    18421 ttaaatttaa accggtacag cgttgcctcg ccttgccgta ctatttgtac tgtctgcggc
    18481 ttcgtcgcct tgtcctgatt tttgttaatc cactatatcc ggctttccat gcttaaacag
    18541 cactacctct tttcagacat tgacggttgc agccgcctac ctgaacctta atgattgact
    18601 attttttaat catgttatta ttttccataa aatacatggc attaagatgt ttttccacaa
    18661 aagatacaca caccggcaaa caccggctgt gtttatcttt tcttatgcct attttttaat
    18721 catcgtattt ttatctttta atttcaatac gcaaaccgac ttatacacac ggttttcaca
    18781 tctttggact gcttccgtgt gtatagcgga tattgccgtt ttcctgtctg acaaaaatgc
    18841 cgtctgagaa cttcagacgg catttgaaac atcggaatca gcggttttgt tcataccact
    18901 cgataaactt gtctgctttg acaaaaccca gcagcggctc gctgcggctg ccgtcggcgc
    18961 ggacgacaaa cacgcccggc ggcccgaaca gaccgtattc tttcaacaac gcctgatgtt
    19021 cgggcgtgtt ggcggttacg tcgatctgga aaaagcgttc catatcgact gcctgatgca
    19081 cttccggctg attgagcgtg taaaccgcca tttctttgca ggaaatgcac cagtcggcat
    19141 aaaaatccaa aacgacaggt ttgtcgggat gttctttcaa cgccgtatcc atcgctgcct
    19201 tcagcgcggc agtatcggca aacattttgc cgtgttccga aaatttgcct gcttcggccg
    19261 gcggattgag ggtcaagaaa tggtgcagcg cggtcgtttt gccgtttgcg ccctgccagc
    19321 cgaaccacgc gccgcctatc agcaatatgc tgcccaatgc gaatgccaca gctttcggac
    19381 ggcgtttctg cctgcgtccg ttgaccagca gcataaaggc aggaaccagc atcagcagcg
    19441 tgtacagcgc gacgacgaga taatagggca aatgcggcgt ggcgaggtaa acggcgacgg
    19501 caagcaggat aaagccgaaa gcgtatttga cggcattcat ccaatcgccc gccttaggca
    19561 ggatatgtcc tccgaacgtg ccgatggcaa tcagcggcac gccggtgccc aacgccaaag
    19621 tgtaaagtgc caaaccgccc aaaaccgcat cgcccgtctg accgatatag cccaaggcaa
    19681 acgccagcgg cggggcgacg cacggtccga caatcagtgc ggacagaatg cccataataa
    19741 agacggaaac gattttaccg ccggagagcc tgctgctctg gttttggaaa tatgactgta
    19801 cggcgttggg aagctggatg ttgaacagcc cgaacataga cagcgccaag acgaccatca
    19861 aagccgatgc cgccaacacg acccaagcct gctgcaacca tacggtcagc agcgcgcccg
    19921 tcagtccggc aacaatgccg accagcgtat aagtcagagc caaaccctga acataaacga
    19981 cggacagcac aaacgcccgc gccttgcccg cctttttgtc accgaccacg atactggaca
    20041 caatcggcag caggggatac atacaggcgg taaaactcag gcccaaaccg gcgagaaaaa
    20101 acgccaaaag attggcgttg agcgtatccc aagacagctt gaaacggccg tcgccgccct
    20161 cgtccccctt cgggggcggc aacgccccgc tgccgttttg agaggaaggc tgcaaaaaac
    20221 ggtctttggc ggatgccggt tcgtcggttt gcggatggta agtgccgttg ccggaaatat
    20281 caaactcggt atccacgggc ggatagcaca cgccggcttc ggcacagccc tgataggtca
    20341 aaaccaattt atacggttcg ccgacagcct ttgcataagg aaaggcaacc tgcgcctcgt
    20401 gatggtgaac cgtctgcctg ccgaaaaact cgtcttcctt ctcttcgccc ttactgaaag
    20461 aaggctgtcc caacaaatcc gccggatcgg tcttgccgac gattttcgcc tgatacatat
    20521 agtatccgtc ggcaatcctg aaacggacgt tcacgccgtc gtcggcaaca gtaagctccg
    20581 gcacgaatgc cttttccggc ggcagcagat cgttcgcatc cagcgcgaaa gcccgtccgc
    20641 acaacatcaa aaatacggcg aacaggcaaa tcagtttttt cataatcgaa tccgtttcag
    20701 acaaataatt tgtccgcatt ataaatggta aggttgacgg taggatttaa tttatgtaaa
    20761 acccgccatt atccgaacct atttccataa acatcttatc ggacccgcca tgtacgatgt
    20821 caatacccac gatgtccgcc gctttttcgc ccgcgtgtgg cagcagcggc tcaatccgct
    20881 gcaattgggc gcgttggaac agaaagccct ccgcattgtc gaagcccatc ccgaatacca
    20941 ccgttatctc gaacgcatcg aagaccatct ggacaccgac tggctgcccg aaaacggcga
    21001 aagcaacccc ttcctgcata tgtcgctgca tttgtccgtc caagaacagg cgggcataga
    21061 ccagccgcac ggcatacgcg ccatccacga caccctgtgc gccaaacgcg gctggccgga
    21121 agccgaacac gaaatgatgg aggcactggc ggaaacactg tggacggcgc aacgctacgg
    21181 caccggtttg gatgtcaatt tctacatgac ccgactgcgc aaactcatcg gcttgggtgc
    21241 agaggatcaa gccaggttaa acccgcatga aatcgcctga ccataccgac cgcctgcaaa
    21301 atgccgtctg aagcggaaca acccctttca gacggcattc attttccccc aatcatttcc
    21361 acaacgcgcg tttcaacata atcaaccaat ccttcttatc caaaacgggg cgttgtgcaa
    21421 acacatcgta tcggcacgcg tccagtttct gcaaaatcaa ctgcgccccc aacacaatca
    21481 tacggagttc caaaccgata cgccctttca attcgcgcgc caaaggcgaa cccgccttca
    21541 gcatacggaa tgcacgccgg cactcatacg ccatcagccg ctgaaacgcc gcatccgccc
    21601 gtcctgctgc gatctgttcc tcagaaacac cgaatttcaa caaatcgtcc tgcgggatat
    21661 aaaccctgcc cttttgccaa tccacagcta catcctgcca aaaattcacc agttgcaaag
    21721 ccgtacaaat accgtcgctt tgcgctacgc acaccgcatc cgttttcccg tataaagcca
    21781 gcataatgcg tccgacaggg ttggcggaac gccggcaata atcggtcaga tcgccgaaat
    21841 gcgcgtaccg cgttttaacc acatcctgcg aaaacgccga gagcagatca taaaacggct
    21901 gcaaatccaa accgaacggc acaaccgcct cggcatccaa tcgtgcaatc aaaggatgcg
    21961 ccgaccggcc gcccgatgcc aacacgtcca actcgcgccg caaaccctcc aaccccgaca
    22021 acctggcttc agacggcata ctgccctcgt ccgccatatc gtccgccgtc cgtgcaaacg
    22081 catacaccgc atgaaccggc ttcctcaacc tgcgcggcaa aaccagcgaa ccgacgggaa
    22141 aattctcata atgcccaacc gacatacctt ctccatccat caaacaaaat gccgtctgaa
    22201 acggaacaaa cccttttcag acggcatcag atacctccaa gctgccggca atcagtggtg
    22261 gtaatgaccg tgcgaaccgt ggacatgacc gtgtgcgatt tcctcatcgg atgcatcgcg
    22321 cacgctttca accgtagctt taaagcggat tttcatgcct gccaaaggat ggttgccgtc
    22381 caccaccgcc ttgccgtcgg caacatcggt tacacgatag acgacaacat cgccggtttc
    22441 aggatcgtcg gcttcaaaca tcatgccgac ttcgacttca acagggaacg cgcccgcatc
    22501 ttcaatacgg accaactccg aatcctgctc gccgaacgca tcgtcggacg aaagcgccac
    22561 atcgaccgta tcgccggcat ccttaccgtg caacgcctct tccaccaaag ggaaaatgcc
    22621 gtcgtaaccg ccgtgcagat acgcaatcgg ttcttcggtt ttatccaaaa gctgattgtt
    22681 ggcatcatac atctcataat gcagcgaaac cacggaattt tttgcaatag ccatatttgt
    22741 cctttcagga acagcagatt gattacaggc gcattctaac acaaccgccg cgccggccga
    22801 ttaccgttaa cctgttcata aactgtacgg cacat
//
LOCUS       DAXGCP010000022        22555 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.022, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000022 DAXGCP010000000
VERSION     DAXGCP010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22555
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.022"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            2..599
                     /locus_tag="ACFJCW_000785"
                     /pseudo
     CDS             2..599
                     /locus_tag="ACFJCW_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244425.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
     gene            745..2421
                     /locus_tag="ACFJCW_000786"
     CDS             745..2421
                     /locus_tag="ACFJCW_000786"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ArnT family glycosyltransferase"
                     /protein_id="HFC4150983.1"
                     /translation="MLTYTPPDARPPAKTHEKPWLLLLMAFAWLWPGVFSHDLWNPAE
                     PAVYTAVEALAGSPTPLVAHLFGQTDFGIPPVYLWVAAAFKHLLSPWAADPYDAARFA
                     GVFFAVIGLTSCGFAGFNFLGRHHGRSVVLIHIGCIGLIPVAHFLNPAAAAFAAAGLV
                     LHGYSLARRRVIAASFLLGTGWTLMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLT
                     AVASLAFALPLMTVYPLLLAKTQPALFAQWLNYHVFGTFGGVRHIQTAFSLFYYLKNL
                     LWFALPALPLAVWTVCRTRLFSTDWGILGIVWMLAVLVLLAFNPQRFQDNLVWLLPPL
                     ALFGAAQLDSLRRGAAAFVNWFGIMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSP
                     YYVPDIDPIPMAVAVLFTPLWLWAITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWL
                     DAAKSHAPVVRSMEASFSPELKRELSDGIECIGIGGGDLHTRIVWTQYGTLPHRVGDV
                     RCRYRIVRLPQNADAPQGWQTVWQGARPRNKDSKFALIRKIGENILKTTD"
     gene            2628..3233
                     /locus_tag="ACFJCW_000787"
     CDS             2628..3233
                     /locus_tag="ACFJCW_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HFC4150984.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDIDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAAANKEQAKAREAIGNGLTMLSPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            3305..3697
                     /locus_tag="ACFJCW_000788"
     CDS             3305..3697
                     /locus_tag="ACFJCW_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HFC4150985.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     GIMLNIGATATQNLRIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     EYRPDTPSENTSAETAPRPAKKGLKLVK"
     gene            3702..3827
                     /locus_tag="ACFJCW_000789"
     CDS             3702..3827
                     /locus_tag="ACFJCW_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4150986.1"
                     /translation="MPSERNRVSDGILSDGAQTESVYRQNLFRRIETVLPLPIRY"
     gene            complement(3896..4342)
                     /locus_tag="ACFJCW_000790"
     CDS             complement(3896..4342)
                     /locus_tag="ACFJCW_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HFC4150987.1"
                     /translation="MSLKTRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDGAKIYTEAGRQDLADKENAEIDVLHRYLPQMLSAGEIRTA
                     VEAAVAETGAAGMADMGKVMVVLKTRLAGKADMGEVNKILKTVLTA"
     gene            complement(4474..4686)
                     /gene="rpsU"
                     /locus_tag="ACFJCW_000791"
     CDS             complement(4474..4686)
                     /gene="rpsU"
                     /locus_tag="ACFJCW_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HFC4150988.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            complement(4976..6826)
                     /gene="ltgA"
                     /locus_tag="ACFJCW_000792"
     CDS             complement(4976..6826)
                     /gene="ltgA"
                     /locus_tag="ACFJCW_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HFC4150989.1"
                     /translation="MYLPSMKHSLPLLAALVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQNNDAAAAAYLENAGDSAMAENVRNEWLKS
                     LGARRQWTLFAQEYAKLKPEGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSPEQRSFAWGVLGHYQSQSLNVPAALDYYGKVADRRQL
                     TDDQIEWYARAALRARRWDELTSVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDAGKNSVLRMAEDGAIKRALVLFRNSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEILATAGYNAGPGRARRWQADTP
                     LEGAVYAETIPFSETRDYVKKVMTNAAYYASLFGAPHIPLKQRMGTVPAR"
     gene            7357..8094
                     /locus_tag="ACFJCW_000793"
     CDS             7357..8094
                     /locus_tag="ACFJCW_000793"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HFC4150990.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIQDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLSNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHAQSEIGRELIRED"
     gene            8096..8782
                     /locus_tag="ACFJCW_000794"
     CDS             8096..8782
                     /locus_tag="ACFJCW_000794"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HFC4150991.1"
                     /translation="MADLTFEQAVSTIVGMKDEIVRALGETFVMVGLSTTFAVIFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPIAIVLKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            8941..9807
                     /locus_tag="ACFJCW_000795"
     CDS             8941..9807
                     /locus_tag="ACFJCW_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC4150992.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASAAAPSADNGAAKK
                     EIVFGTTVGDFGDMVKEQIQAELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHK
                     PYLDDFKKEHNLDITEAFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARALV
                     MLNELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYA
                     ISSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGY
                     KYPAAWNEGAAK"
     gene            complement(9850..10440)
                     /locus_tag="ACFJCW_000796"
     CDS             complement(9850..10440)
                     /locus_tag="ACFJCW_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HFC4150993.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDVETHLVVSKGAEMAR
                     ASETDYTKDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSIAHTLSLFGIDTPDLAEWQGMADYKDKNAV"
     gene            10598..11458
                     /locus_tag="ACFJCW_000797"
     CDS             10598..11458
                     /locus_tag="ACFJCW_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HFC4150994.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTAVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLSEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPESVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGKIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            12132..12485
                     /locus_tag="ACFJCW_000798"
     CDS             12132..12485
                     /locus_tag="ACFJCW_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HFC4150995.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVMLSLLSMLAVFAIWHQSLVFVPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            12475..13341
                     /gene="atpB"
                     /locus_tag="ACFJCW_000799"
     CDS             12475..13341
                     /gene="atpB"
                     /locus_tag="ACFJCW_000799"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HFC4150996.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHSEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRIVPTADLNTALALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            13398..13634
                     /gene="atpE"
                     /locus_tag="ACFJCW_000800"
     CDS             13398..13634
                     /gene="atpE"
                     /locus_tag="ACFJCW_000800"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HFC4150997.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            13704..14174
                     /locus_tag="ACFJCW_000801"
     CDS             13704..14174
                     /locus_tag="ACFJCW_000801"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HFC4150998.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKIAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLRDQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            14179..14712
                     /locus_tag="ACFJCW_000802"
     CDS             14179..14712
                     /locus_tag="ACFJCW_000802"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HFC4150999.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            14723..16270
                     /gene="atpA"
                     /locus_tag="ACFJCW_000803"
     CDS             14723..16270
                     /gene="atpA"
                     /locus_tag="ACFJCW_000803"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HFC4151000.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVSTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTLGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPVEKIAPGVIARKSVDQPMQTGLKAIDSMIPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            16295..17170
                     /gene="atpG"
                     /locus_tag="ACFJCW_000804"
     CDS             16295..17170
                     /gene="atpG"
                     /locus_tag="ACFJCW_000804"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HFC4151001.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            17208..18605
                     /gene="atpD"
                     /locus_tag="ACFJCW_000805"
     CDS             17208..18605
                     /gene="atpD"
                     /locus_tag="ACFJCW_000805"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HFC4151002.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRTIAMGSSDGLKRGMTVSNTGSPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFSGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LAVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            18616..19038
                     /locus_tag="ACFJCW_000806"
     CDS             18616..19038
                     /locus_tag="ACFJCW_000806"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HFC4151003.1"
                     /translation="MSIMQVEVVSGEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGILEVQPDKVTVLADVAVRSAEMDRARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
     gene            19210..20106
                     /gene="glyQ"
                     /locus_tag="ACFJCW_000807"
     CDS             19210..20106
                     /gene="glyQ"
                     /locus_tag="ACFJCW_000807"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HFC4151004.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTPDGNTVSYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLFAEENADLALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYIESREKLGFPLIKK"
     gene            20223..22286
                     /gene="glyS"
                     /locus_tag="ACFJCW_000808"
     CDS             20223..22286
                     /gene="glyS"
                     /locus_tag="ACFJCW_000808"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HFC4151005.1"
                     /translation="MTTQTLLIELLTEELPPKALNNLGNHFAASVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAVKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGRQDVYAYEYVQTGKPLGGLLEDIINQAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLIVLHGGDVVNVSVLGLQSGNQTLGHRFLSDGEIIIENADSYAAQMRGQGKVVA
                     SFAGRKAAIQTALEGQARRLNATVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTENPSHIIRGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAGRAAR
                     LAKADLVTEMVGEFPELQGTMGKYYARLDGETEEIAEAIEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTAFD
                     SFPQGLLNEKTPSETADFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     VFKQLPEAAALAAANKRVQNLLKKADAELGAVNESLLQQDEEKALYAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAGQMNAVADI
                     ALLGE"
     gene            22350..>22555
                     /locus_tag="ACFJCW_000809"
     CDS             22350..>22555
                     /locus_tag="ACFJCW_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC4151006.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLAAVVNQTWRNLDILIVDDGSTD
                     GTLAIAKDFQKRDSRIKILAQAQNS"
BASE COUNT         5229 a         5993 c         5917 g         5416 t
ORIGIN      
        1 cctgtattct gggacagccg tagacttact tattatccta atgttatttt ttgccaaaaa
       61 aaagcagaaa agacatcatt aacatctatt taggacaatt tctaggctct gttagcctga
      121 tattgctaag tttgcttttt gcatttgtct tagattatat tcctagtaaa gagattttag
      181 gtttgctcgg cttgattccg attttcctag gcctcaaagt tttgctgtta ggagattccg
      241 atggagagtc tattgccaaa gagggtttgc gcaaagataa taaaaacctg atttttctag
      301 tcgctatgat tacttttgca agttgtggcg ctgacaatat tggtgtcttt gtcccatatt
      361 ttactacctt aaatttagcg aatttgatag tggctttact tacctttcta gttatgattt
      421 atctcttggt tttttctgcc caaaaattgg cacaagtccc ttctgtcgga gaaactttgg
      481 aaaaatatag cagatggttt gttgccgttg tttatttagg attggggata tatatcctga
      541 ttgaaaacaa cagttttgat atgctatgga ctgtgtcggg ccaggaaaaa atattatgaa
      601 aaagatagta tctgcaaaga ctgccccgtg cagtcttttt tgttgccggt ctttttgtgt
      661 ctgatgccgt ctgaagcagt ctctgcacga cctttgtgcg aatatttgct acacttggca
      721 atccgtccat ttcttctcac gcttatgctg acctataccc cgcccgatgc ccgcccgccc
      781 gccaaaaccc acgaaaaacc gtggctgctg ctgttgatgg cgtttgcctg gctgtggccc
      841 ggcgtgtttt cccacgattt gtggaatcct gccgaacctg ccgtctatac cgccgtcgaa
      901 gcactggcag gcagccccac ccccttggtt gcccatctgt tcggtcaaac cgatttcggc
      961 ataccgcccg tgtatctttg ggttgccgcc gcattcaaac atttgctgtc gccgtgggca
     1021 gccgacccgt atgatgccgc acgctttgca ggcgtatttt ttgccgttat cggactgact
     1081 tcttgcggct ttgccggttt caactttttg ggcagacacc acgggcgcag cgttgtttta
     1141 atccatatcg gctgtatcgg gctgattccg gttgcccatt tcctcaatcc cgccgccgcc
     1201 gcctttgccg ccgccggact ggtgctgcac ggctactcgc tggcacgccg gcgcgtgatt
     1261 gccgcctctt tcctgctcgg tacgggttgg acgttgatgt cgctggcggc agcttatccg
     1321 gcggcgtttg cgctgatgct gcccctgccc gtgctgatgt ttttccgtcc gtggcaaagc
     1381 aggcgtttga tgttgacggc agtcgcctcg cttgcctttg ccctgccgct tatgaccgtt
     1441 tacccgctgc tcttggcaaa aacgcagccc gcgctgtttg cgcaatggct caactatcac
     1501 gttttcggta cgttcggcgg cgtgcggcac attcagacgg cattcagttt gttttactat
     1561 ctgaaaaatc tgctttggtt cgcactgccc gcgctgccgc tggcggtttg gacggtttgc
     1621 cgcacacgcc tgttttcgac cgactggggg attttgggca ttgtctggat gcttgccgtt
     1681 ttggtgctgc tcgcctttaa tccgcagcgt tttcaagaca acctcgtctg gctgctgccg
     1741 ccgcttgccc tgttcggcgc ggcgcaactg gacagcctga ggcgcggcgc ggcggctttt
     1801 gtcaactggt tcggcattat ggcgttcggg ctgtttgccg tgttcctgtg gacgggcttt
     1861 ttcgccatga attacggctg gcccgccaag cttgccgaac gcgccgccta cttcagcccg
     1921 tattacgttc ccgacatcga tcccattccg atggcggttg ccgtactgtt cacacccttg
     1981 tggctgtggg cgattacccg gaaaaacata cgcggcaggc aggcggttac caactgggcg
     2041 gcaggcgtta ccctgacctg ggctttgctg atgacgctgt tcctgccgtg gctggacgcg
     2101 gcgaaaagcc acgcgcccgt cgtccggagt atggaggcat cgttttcccc ggaattaaaa
     2161 cgggagcttt cagacggcat cgagtgtatc ggcataggcg gcggcgacct gcacacgcgg
     2221 attgtttgga cgcagtacgg cacattgccg caccgcgtcg gcgatgtccg ttgccgctac
     2281 cgtatcgtcc gcctgcccca aaacgcggat gcgccgcaag gctggcagac ggtctggcag
     2341 ggtgcgcgcc cgcgcaacaa agacagtaag tttgcactga tacggaaaat cggggaaaat
     2401 atattaaaaa caacagattg agccgaattt ctggattaag tgccggaaat cgcgtataat
     2461 tgcgcgatta aacctttata tagtggatta aatttaaatc aggacaaggc gacgaagccg
     2521 cagacagtac aaatagtacg gcaaggcgag gcaacgccgt accggtttaa atttaatcca
     2581 ctataaatca gccgttttgc aggcatcaca caggagcgac aattattatg atgaccctct
     2641 attccggcat tacctgcccc ttcagccacc gctgccgctt cgttttgtac gaaaaaggta
     2701 tggattttga aatcaaagac atcgatattt acaacaaacc cgaagacctc gccgtcatga
     2761 acccgtacaa ccaagtcccc gtgctggtcg agcgcgattt ggtgctgcac gagtccaaca
     2821 tcatcaacga atacatcgac gaacgcttcc cccatccgca gcttatgccc ggcgatcccg
     2881 ttatgcgcgg ccgggggcgg ctggtgctgt accgtatgga aaaagaattg ttcaaccacg
     2941 tccaagtttt ggaaaacccc gccgccgcca acaaggaaca ggcaaaagcg cgcgaagcca
     3001 tcggcaacgg cctgacgatg ctttcccctt cgttcagcaa aagcaaatac atcctcggcg
     3061 aagatttttc tatgattgat gttgccctgg ccccgctgtt gtggcggctc gaccattacg
     3121 atgtcaaact gggcaaaagt gccgcgccgc tgctcaaata cgccgagcgt atcttccagc
     3181 gcgaagcctt tatcgaagca ctgacacccg ccgaaaaagc catgcgcaaa taagtccgaa
     3241 atgcttgcaa aacccgccgt tttgcaggca ttttcacatt caggcacacc acacggaacc
     3301 catcatgccc acctcaacca aaccctacat cctccgcgca ctttgcgaat ggtgcagcga
     3361 caacagcctc acgccgcaca tccttgtctg ggtaaacgag catacgcgcg tccccatgca
     3421 gtacgtccgc gacaacggaa ttatgctcaa catcggcgcg accgccacgc aaaaccttcg
     3481 aatcgacaac gattggatca gcttttccgc ccgtttcggc ggacaagcgc acgacatatg
     3541 gatacctgtc ggacacgtcc tcagcctttt cgcacgggag accggagaag gtatggggtt
     3601 tgaattggag gagtaccgcc ccgacacgcc gtctgaaaac acttctgccg aaaccgcgcc
     3661 ccggcccgcc aaaaaaggtt tgaaattggt caaataaatc tatgccgtct gaacggaatc
     3721 gtgtttcaga cggcattttg tccgatgggg cgcaaacgga atccgtttat cggcaaaacc
     3781 tgtttcggcg tatcgaaacc gtgttgcccc tgccgattcg atattaggac attgaaaatg
     3841 ccgtctgaac ctgcgatacg ggcttcagac ggcgttttgt ccgatattcg ggcaatcagg
     3901 cggtcagtac ggttttcaag attttgttga cttcgcccat atcggctttg ccggcgaggc
     3961 gggttttcaa tacgaccatc actttgccca tatccgccat acctgccgcg ccggtttcgg
     4021 caacggctgc ttcgacggcg gtgcggattt cgccggcgga gagcatttgc ggcaggtagc
     4081 ggtgcagcac gtcgatttcg gcgttttctt tgtctgccaa atcctgacgg ccggcttcag
     4141 tgtagatttt cgcgccgtct ttgcgctgtt tgaccatttt ggtcaggatg gcggtgattt
     4201 tggcatcgtc ggcttcggtg cgttcgtcta cttcaaactg tttgacggcg gcattgatga
     4261 ggcggatggt gccgagggaa acttgatctt tggcgcgcat cgcggttttc atatcttcgg
     4321 taaggcgggt tttcaggctc atgatgtcct cgctgggatg tcggatggaa acggcgggtt
     4381 tcgatgccgt ctgaaaagca aaacacaccg cagagcaggt cttgcggtgt gtcttcatat
     4441 cacagggctg acctgtaatc tgtacttgaa cgtttagtac attttgggcg gcagctgttg
     4501 gctgcgcagg cgtttttgca ggcgttttac ggctgccgct tttttgcgtt tgcgttcggt
     4561 agtcggtttt tcgtaggctt cgcgggcgcg cagctcggtc agcaggccgg ttttttctac
     4621 ggcgcgtttg aaacggcgca tagcgacttc aaatggttca ttctctttta cgcggattgc
     4681 aggcatttta tttcctttaa taaattcggt tgttccatct gcccatcata atcggtggaa
     4741 agggtagggc agacggtatt gtaggttttc cgtatcgctg tgcctttcgg cggcgggata
     4801 cgcgccgtga cggaaacatc acctcctaac gggccggctt gtgccgtgtc aagctgcttg
     4861 aaaaagtagg aaaaacaatt ttcggattgt cttatattta tggttcgccg tcaatgccgt
     4921 tcgggataaa aatgccgtct gaaagaccgg gcgggtttca gacggcatcg gcacgtcagc
     4981 gtgcgggaac ggtgcccata cgctgtttga gcgggatgtg cggcgcgccg aagagggagg
     5041 cgtagtaggc ggcattggtc atcacttttt tgacatagtc gcgcgtttcg gaaaacggga
     5101 tggtttcggc atataccgcg ccttcgaggg gtgtgtccgc ctgccatcgg cgcgccctgc
     5161 cggggccggc gttatagcct gcggtggcga ggatttcgtt gttttgcagg cggcgtttgg
     5221 tgtccgccat ataccacgtc cccatacgga tattgccgtc ggcggtgtag agctgggcgg
     5281 catccatacc gattttgccg gcgatttcgc gcgcggtggc aggcataacc tgcatcagcc
     5341 cctgcgcgcc tacgcgggat tgcgcgccta taacgaagcg gctttcctga cgaatcaggc
     5401 cgtaaaccca agccggatcg acattaacat tttgcgcgtg gcggattacc gtgtctttaa
     5461 acggcgaaat atagcgcaag gtgtagttga gtttgcggtc ggtgcgttcc gcgctgttga
     5521 ccgccatatc gtaaaaaccg tggtcgaacg cggtttgcgc ggcggtcagc agcttgtctt
     5581 cgtcaaagcc gcgtgtggca aaacgccatt ccgcctgagc ctgacggcgc attttcgcat
     5641 cgccggcggt tcggctgttt cggaacagca ccagcgcgcg cttaatcgcg ccgtcttccg
     5701 ccatacggag gacactgttt ttgccggcat cgggcacatt gttgcgcgta tcgattttgc
     5761 gccccaattc ttcccctgcc agtacggcat aaaaattcct gcccgtcgct gccgcctgtt
     5821 tgtaaagttt ttccgcttct tgcgtgttgc ccgttgcggc gcggctgcgt gccagccagt
     5881 agagccaggt cgggcttttt tgcagttttt cgggcatatg cgagatcacg gaggtcagct
     5941 cgtcccaacg tcgggcgcgc aaggcggcgc gggcgtacca ctcgatttgg tcgtcggtca
     6001 gttggcggcg gtcggcaacc ttgccgtaat agtccaaggc ggcaggcaca ttgaggcttt
     6061 gcgactgata atgccccaat acgccccacg cgaaactgcg ttgttcgggg cttaaaccgc
     6121 tttccatttc ggacagcagg gcggcggcat tcggcgattt gcgtgcttct ttgccgatga
     6181 cgttcaacag ggcatattcg cgcgaacctt gtgtaccgcc gtcaaacggg ctgcccaatg
     6241 cggcggcaag gttgcgtgcg tctgtggttt ggcggccggc cagcagtccg cgcacgcgcc
     6301 tccaggcatc gttgccgtcc aacaagccgg atgcggctgc ctgttccaac agtttggtgc
     6361 agcccgaagg cagtttgccc gtatttttga ccagttcggc ggcacgcgta tagtcgttgc
     6421 ggctcgaatc ggcgtagcat tcgacttctt gggcgcgccc ttcaggtttg agtttggcgt
     6481 attcctgtgc aaacagcgtc cactgtctgc gcgcgcccaa agacttcagc cactcgttgc
     6541 ggacattttc cgccatcgcg ctgtcgccgg cgttttccaa ataggcggcg gctgccgcat
     6601 cgttgttttg tttcactgca tccagtgcgg acgggtagcc gccgtaatct gccagcgttt
     6661 ttccttccgg ttcggcaggg cgggtgggaa cgcttgccga aaggtcggca gtttctatat
     6721 tgtctgccgg ggtcttgccg gctggcagtg tgtttgtcga agaacacgcg gcaagcacca
     6781 gggccgccag cagcggcagg gaatgcttca tagagggtag gtacatcgga tttccttaag
     6841 aatcggaacc ctgaacggtc agggttggaa aagacaaaat gccgtctgaa caggcgtttg
     6901 catgaattat atgccgaaac tgcaccgcct ttggaatgtt tccgacataa tttatagtgg
     6961 attaaattta aaccagtacg gcgttgcctc gccttagctc aaagagaacg attctctaag
     7021 gtgctgaagc accaagtgga tcggttccgt actatttgta ctgtctgcgg cttcgtcgcc
     7081 ttgtcctgat ttttgttaat ccactatata tttttcaatt atttgccgtt ttggtgcgaa
     7141 ccgctgcctt tgcccgtttc agacggcatt gtccgaaatg gttgcccgct tcctgcctta
     7201 ttgacaaaaa aacgctttcc cgataatatc ctacgaaaat taacctgccg atttgacaca
     7261 gcttgcgggc ataacagcta aagcgttccg acaatttcag ctttatcttc cgcgcccgtt
     7321 gtgtccgaca tcgggctttg ttgtatggga aagacaatga ttattttgga caaggtttcc
     7381 aagcattacc aaacgcgcga caaaacccgt tttgccgccg tcgagccgac cagcctcgaa
     7441 attcaagacg gcgaaatctt cgggctgatg ggctattccg gcgcgggcaa atccactttg
     7501 ttgcgcctga tcaacctgtt ggaacgcccc gacacgggca aagtcaacgt ctgcggacaa
     7561 gaactgaccg cgctcgatgc cgccgcattg cgtcaggcgc ggcagaatat cggcatggtg
     7621 tttcagcagt tcaacctttt aagcaaccgc accgtcgccg gcaacgttgc ctttccactg
     7681 gaaatcgccg gatggccgtc tgaaaaaatc aaagcgcgcg ttgccgagtg cctcgaaatc
     7741 gtcggcttga ccgaacgcgc cggccactac cccgcccagc tttcaggcgg gcagaaacaa
     7801 cgcgtcggaa tcgcccgcgc gctcgcgccc aagccgcaag tcatcctcgc cgacgaaccc
     7861 acttccgccc tcgaccccgc caccacgcgc agtgtcttgg aatgtttgga agacatcaac
     7921 aaacgcttca acgttaccat cgtcatcgta acccacgaaa tgagcgtcat cagacgattg
     7981 tgcgaccgcg ccgccctgtt ggataaaggg aaagtggtgg aaatcgtcga agtacgcggc
     8041 aaccaaatcc acgctcaatc cgaaatcggg cgcgaactga ttcgggagga ctgatatggc
     8101 agacttaaca ttcgaacaag ccgtttccac catcgtcggc atgaaagacg aaatcgtccg
     8161 cgccttgggc gaaactttcg tgatggtcgg cttgtccacc acattcgccg tcatcttcgg
     8221 cacgctcttg ggcgtgttgc tcttcgtaac ttccagccgc caactgcatt acaacaagcc
     8281 ggtgaacttc ctgctcgaca acctcgtcaa cctcatgcgc gccttcccct tcgtcatcct
     8341 gatgattgcg atgatacccg ccacacgcgc catcgtcggc agcaccatcg gcccggttgc
     8401 cgcctcgctg gtgttgagcg tgtcgggatt gttttatttt gcccgactgg tggaacaaaa
     8461 cctgcgcgaa gtcccaaaag gtgtgattga agccgccgcc gcgatgggtg cgccgccgat
     8521 tgccatcgtc ctcaaagtcc tcttgaacga agcgcgcgcg ggcatggttt ccagcattac
     8581 cgtgcttgcc atcgggcttt tgtcatacag cgcggcggca ggcatgatag gcggcggcgg
     8641 cttgggcgac ctcgccatcc gctacggcta ctaccgctac caaaccgaag tcatcgtctt
     8701 catcgtcgcc ctcctcgtgc tgctggtcat cctgattcaa agcaccggca acgcgttggc
     8761 gcggaaactc gacaaacgtt aaacccgaat gccgtctgaa cgccaaaaac cccgccgcta
     8821 tccgaaaaat gctataaaat ccccctgttc gcggcaaatg ccgtctgaac gccgaatccg
     8881 gacggcagga ctccctgcct gtcatttttg tttgaaaccg ccacaacatc aggagaaaat
     8941 atgaaaacct tcttcaaaac cctttccgcc gccgcactcg cgctcatcct cgcagcctgc
     9001 ggcggtcaaa aagacagcgc gcccgcagcc tctgccgccg ccccttctgc cgataacggc
     9061 gcggcgaaaa aagaaatcgt cttcggcacg accgtcggcg acttcggcga tatggtcaaa
     9121 gaacaaatcc aagccgagct ggagaaaaaa ggctacaccg tcaaattggt cgaatttacc
     9181 gactatgtgc gcccgaatct ggcattggcg gagggcgagt tggacatcaa cgtcttccaa
     9241 cacaaaccct atcttgacga tttcaaaaaa gaacacaacc tggacatcac cgaagccttc
     9301 caagtgccga ccgcgccttt gggactgtat ccgggcaaac tgaaatcgct ggaagaagtc
     9361 aaggacggca gcaccgtatc cgcgcccaac gacccgtcca acttcgcacg cgccttggtg
     9421 atgctgaacg aactgggttg gatcaaactc aaagacggca tcaatccgct gaccgcatcc
     9481 aaagccgaca tcgcggaaaa cctgaaaaac atcaaaatcg tcgagcttga agccgcacaa
     9541 ctgccgcgca gccgcgccga cgtggatttt gccgtcgtca acggcaacta cgccataagc
     9601 agcggcatga agctgaccga agccctgttc caagagccga gctttgccta tgtcaactgg
     9661 tctgccgtca aaaccgccga caaagacagc caatggctta aagacgtaac cgaggcctat
     9721 aactccgacg cgttcaaagc ctacgcgcac aaacgcttcg agggctacaa ataccctgcc
     9781 gcatggaatg aaggcgcagc caaataaggc agtcgtataa aatgatgccg tctgaaccgc
     9841 attccgtgtt cagacggcat ttttgtcctt ataatccgcc attccctgcc attccgccaa
     9901 atccggcgta tcgattccga acagcgacag cgtgtgtgcg atactgtgcg ccactatgtc
     9961 gtccgccgtc tgcggcttgc ggtacatcgc aggaacaggg ggaaacacca cgccgcccat
    10021 ttccgttacc cgcttcatat tgtccaaatg ggcaaggttc agcggcgttt cgcgcaccat
    10081 cagcaccagc cgccgccttt ccttcaaaac cacatccgcc gcacgcgtca agaggttgtc
    10141 gccgaagccg tgcgcgacag aggcaagcgt ccgcatcgaa cagggtgcga ccagcatccc
    10201 gtccgtttta aacgtaccgc tggcaatgca cgccccgata ttgccgatcg gatggacgaa
    10261 atcagccaag gcatatactt cgtctttcgt ataatccgtt tccgaagcgc gcgccatctc
    10321 cgcgcctttc gataccacaa ggtgcgtttc gacatcttgc gcgcgcaaaa gttccaaagc
    10381 cttcacgccg tattggaaac cgctcgcccc gctgatgccg attatcaaac gccgtaccat
    10441 catccgcctt tcccataaaa ccgcctgcaa cggcaaaccg gctattatag tgaaaaaaca
    10501 gaaatccgat aaacacggat acaaattgtc ggcaacaccc aatatccgat aaaatacccg
    10561 atttaacatc ctatctgaat aggcacggga gggcggtatg gcaaaagtaa aaggcggatt
    10621 ggggcgcggc ttggattcgc tgctcgccaa cggtgcggac aacagcagcg gcgaccggtt
    10681 gactgcggtt gcggttaaag atatccggcc cggccgctat caggcgcgcg tccaaatcga
    10741 tgacgaagcc ttgcaggaac tggcagattc gattaaggcg caaggcgtga tacagcccgt
    10801 catcgtgcgc gaacacggac tgtcccgata cgaactgatt gcaggcgaac gccgttggcg
    10861 cgccgctcag attgccggcc tgtccgaaat ccccgccgtt atcaaaacca tcagcgacga
    10921 aaccgcattg gcaatgggtt tgatcgaaaa cctccagcgc gaaaacctca accccatcga
    10981 agaagcacaa ggcttgaaac gccttgccga cgagttcggg ctgacccacg aaaccatcgc
    11041 ccaagccgtc ggcaaaagcc gaagcgcgat ttccaacagc ctgcgccttt taagcctgcc
    11101 cgaatccgtg caggaaatgc tttaccaacg ccgcctcgaa atggggcacg cccgcgcact
    11161 gctgaccctg cccgtcgtcg aacagctcga attggcgcaa aaggccgtca aaaacggctg
    11221 gtcggtgcgc gaagtcgaac gccgcagcca ggccgccctt caaaacaaac gtcccgagcc
    11281 aaaaaaaact gccgccgccg acatcggccg cctgaatgat ttgctgactg aaaaattggg
    11341 tgtcaacgcc gaaatcaaga ccgccaacca taaaaaaggc aaaatcatcc tgcatttcga
    11401 cacgcccgaa accttcgacc atatcttgaa gcagttgggc atagattacc ggccttaatt
    11461 ttgcgggata tgccgtttga aatatagaga atagctttcc agattttaag tgggaaatat
    11521 aattctattg acattttttc tgcttcgcgt aagaatcgtt ttcctgtttt catttttaat
    11581 tttcgaggaa attatgaaca cacgcatcaa ctttacgcaa ctgtgggtaa gcgcgtgagc
    11641 caatgctatg ttaccagtgt aatcagcaca atcggcgtta ccacttccga tgcaatttgt
    11701 tcgggaggcg gaacgaacaa agccaaaagt caatgcaatg ctttgcttaa agcggcaggc
    11761 cgctgctaat cctttattcg gaaaaggtcg tctgaaaata ttttcagacg accttttatt
    11821 tattgagcaa actccccaaa ctgccgacaa tccgaccgat aaactactac aatttcgcgt
    11881 tgatttttta ttatttccac gtaaagcaaa caaatcacgt aagaacatta aaagtgtaaa
    11941 gaaattgcgg acaaactcct taatatcctg taatcatatg taatatgtgt tagaatagcg
    12001 gagttggatt ttggggagtc gctcgtctgt atcggcggcg agtttcacaa agattaacat
    12061 attgcttgac gtaataaggc ttctaaatta tattagccgc gccccaaacc tgaggcggaa
    12121 acattccctt tatgaagcag attatcatcc tacaatccgc cgtattgtcc atatgcgccg
    12181 cagttgcctt tgccgtatgg ggttttgccg gattcctttc ggcggtcggg ggcggtttgt
    12241 cctacctgct tcccacgttt gttgcagttt tacttctaaa acttttcagg ggaaacccct
    12301 tcctgcaaag caggatgttc gtcttcggag agattttaaa agtaatgctg tcgctgttgt
    12361 ccatgcttgc cgtatttgca atatggcatc aatcgctggt gttcgtcccg tttttgatgg
    12421 ggctgctcgg tgtcagccat ctggtttttt tagtattgtt gagagtgaaa gattatggca
    12481 ggtgaaacca ttaccgctgc cgactacatc aagcaccact tgcagagctt gaccagtttg
    12541 tcggatgtta ctcagggtca gggactgaaa aacattgctg atttttcgtt tattaacctt
    12601 gatgccgttt tttttgccgt cctgttgggc gtaatcggca gcttcctgtt gtggcgcggt
    12661 gcaaaaaaag caacggcagg cgttcccgga cgtttccagg ccgccgtgga aatcttgttc
    12721 gagtttgtgg acgatatgtg taagagcatc attcacagcg aaaagtctag aaaagccgtc
    12781 gcgccgttgg gtctgacgct gtttgtttgg attttcctga tgaacgcgat ggatatgctg
    12841 ccggtcgatt tgctgccgat ggtatggcag ggcattaccg gcaaccatca cgccctgctg
    12901 cgcatcgtac cgactgccga tttgaacacc gctttggcac tcgctgtcgg cgtgttgctg
    12961 atttgtatct attacaacat caaaatcaaa ggattgggcg gctggtttca cgagttgttc
    13021 agtgcgccgt tcggtgcaaa actcgcacct gcgaactttc tgttgaactt ggtcgagttt
    13081 ctttctaaaa ccgtatccca cggtatgcgg ttgttcggca atatgtatgc gggcgagctg
    13141 gtattcctgc tgatagcctt gcttggcggt gcttgggcgg cttccggcag cgttgaagtc
    13201 atggatccga ttctgtttgt attccacatt attgccggtt tggcatgggc gattttccat
    13261 attttggtga ttaccctgca ggcatttatt ttcatggcgt tggcgttcgt ctatatcggg
    13321 caggcgcacg atgcccactg attttcccaa gtagtttgtt tttgtagttt aacctttgtt
    13381 tctttaagga gtttaaaatg ggtttgattg ctatcgcatg tggtttgatc gttgcattgg
    13441 gtgcattggg tgcatctatc ggtatcgcaa tggtcggttc taaatatttg gagtcttctg
    13501 ctcgccaacc tgaactgatt ggtccgctgc aaaccaaact gttcctgatt gccggtctga
    13561 ttgatgccgc attcttgatc ggtgtcgcca ttgcactact gttcgccttc gtcaacccgt
    13621 ttgcaggtgc ataatcagga cggattcgtc cgttcgtaca ggtgcagcct gtttgattaa
    13681 ccccaatacg aaggttaagt aacgtgaata tcaatgcaac attattcgct caaatcatcg
    13741 tctttttcgg tttggtatgg tttaccatga aatttgtgtg gccgccgatt gcaaaagctt
    13801 tggatgagcg tgccgcaaaa atcgccgagg gcttggctgc cgccgagcgt ggtaaaagcg
    13861 atttcgagca ggctgaaaaa aaggttgcag aacttttggc agaagggcgt aatcaggttt
    13921 ccgaaatggt tgccaacgcc gaaaaacgtg ccgccaaaat tgtcgaagaa gccaaagaac
    13981 aggcttcttc cgaggcggcg cgcattgcag ctcaggcaaa ggccgatgtg gagcaggaat
    14041 tgttccgcgc acgcgaatcc ctgcgcgatc aggttgccgt gttggctgtc aaaggtgccg
    14101 aatctatttt gcgcagcgaa gtcgatgctt ccaaacacgc aaaactgctc gataccctga
    14161 aacaggagtt gtaatcttat ggcagagttc gcaacgatcg ccagacctta tgcaaaggca
    14221 ttgttcggtc tggctcagga aaaaaaccaa attgagtctt ggttgggcgg actggaaaaa
    14281 cttgcggcgg ttgttcagga agggaaggtg gcttcattga ttgaccgtcc tgaaacgaat
    14341 gcttcagaaa aagcagatat cctcatcgat ttggtcggtt tgaaagacaa ggagttaaaa
    14401 aactttgtta tcgtcttggc cgggcagaaa cgtttgtcga tattgccgga agtgtatgct
    14461 caatatcaag acttgacctt atcattcaac catatcaaat ctgccgtcat ttacagtgcc
    14521 tatccgttga ccgacaaaca ggtcggcgag ttggcgcaaa tgctgaataa gcgtttcgac
    14581 agcgagctga aaatctctgt cgaaatcgaa ccggagctga ttggcggcat aaaagttgaa
    14641 gtgggtgatc aggttttgga tttgtctgta caaggcaaac tgagtgcctt gtacacgact
    14701 atgacgaatt aggagagttt tcatgcagct taatcctgct gaaattagcg atctgattaa
    14761 agccaagatc gaaaatctgt ctgtaaatgc cgaagtgagt acccgtggta cggtgatttc
    14821 ggtaactgac ggtatcgttc gcatccatgg tttgtcagat gcaatgcaag gtgagatgct
    14881 cgaattcccg ggtaacactt taggcttggc gatgaacctg gagcgcgact ccgtcggtgc
    14941 cgtagtgttg ggcgagtacg aacatattaa agaaggcgac acggttacct gtaccggccg
    15001 tattttagaa gtgccggtcg gacgcgaatt ggtcggacgc gtcgtcgatg cattgggtcg
    15061 gcctatcgac ggcaaaggcc cgattaatac aactttgacc gcccctgtcg aaaaaatcgc
    15121 accgggcgtg attgcacgca aatcggttga tcagccgatg caaaccggtc tgaaggcgat
    15181 tgactctatg attcctgtcg gtcgcggtca gcgtgagttg attattggag accgtcagac
    15241 aggtaaaacg gccgtggcat tggatgccat cgtcaaccaa aaaggtacgg gtgttatctg
    15301 tatctatgtc gctatcggtc aaaaagcatc ttctattgcc aacgtggtcc gcaaattgga
    15361 agagcatggc gcgatggaac acacgattgt ggttgctgca actgcatctg aagcggcggc
    15421 attgcaatat atcgcacctt attcaggttg tacgatgggt gaattcttcc gcgatcgtgg
    15481 cgaagatgcc ttgattgttt atgacgattt gtccaaacag gctgtggctt accgtcaaat
    15541 ttccctgctt ttgcgccgtc cgcccggccg cgaagcctat cccggcgatg tgttctacct
    15601 gcactcccgt ctgttggaac gtgcggcacg tgtcaatgaa cacgaagtgg aaaaattgac
    15661 caacggcgaa gtaaaaggca aaaccggttc tctgaccgcg ttgccgatta tcgaaaccca
    15721 agcgggcgac gtatctgctt tcgttccgac taacgtcatt tcgattaccg acggtcagat
    15781 tttcttggaa accgacctct tcaacgccgg tatccgtcct gcaatcaatg ccggtatttc
    15841 cgtatcccgc gtaggcggtg ctgcacaaac caaagtgatt aaaaagctgg gtggcggtat
    15901 ccgtttggcg ttggcacaat atcgtgaatt ggcggcgttc tcgcaatttg catccgattt
    15961 ggatgaagct acgcgcaaac agttggagca tggcgaagtc gtaaccgaac tgatgaaaca
    16021 gaaacagttc agtacgttga atacggctga aatggctttg accctttggg caatcaacaa
    16081 cggttcgtat tctgatgttc cggttgccaa agctctagct tttgaatctg aatttttgag
    16141 ctttgtccgt acccaacatc cggaagtttt ggaagccgtc aatgcttcag gtgcaatgtc
    16201 cgacgagagc gagaaaacgc ttgaagcagc catgaaatcc ttcaaatctt cttacgccta
    16261 tcaggcataa ggcttgaagt gaaaggagtc tgaaatggca gtaggaaaag agattctcac
    16321 caaaatccgc agtgttcaga atacccaaaa gatcactaaa gcgatgcaaa tggtgtcaac
    16381 ctctaaaatg cggaagactc aggaacggat gcgtttggcg cgtccgtatg ccgaaaaagt
    16441 gcgtatggtg atgagccatc ttgcgcaaac caataccgat catggtattc cgttactgga
    16501 atctcatcgg gaaatcagac gtgtcggttt tattttgatt acgtctgata agggtttgtg
    16561 tggcggtttg aacgccaacg tgctgaaaaa gtttttggca caagttcaag agtatcggaa
    16621 tcaaggtatt gaagaggaaa tcgtatgcct tggcagtaaa ggtctgatgg cgtgtcagag
    16681 cattggtctg aatgtggttg ccagtgccgt aaatttgggc gataccccaa aaatggaaat
    16741 gctgctcgga cctttgacag aacttttcca acggtatgag aaacatgaaa ttgacagaat
    16801 ccatctggtg tattcgggtt ttgtcaatac catgcgtcaa gaaccgagga tggaagtatt
    16861 gctgcctatc ggtgagaacg tgattggcga ttcagctccc aaatcaccgt tcagctggga
    16921 ataccgctac gaaccgactg cacttgcagt gttggaatat ctggttcgcc gctatttaga
    16981 gtctgtggtt tatcaggcgt tgagcgacaa tatggcatcc gaacaggcag cccgcatggt
    17041 tgccatgaaa gctgcaacag acaatgcagg caatgccatc aaagagttgc gtctggtata
    17101 taacaaatcg cgtcaagctg cgattaccac ggaattgtca gaaattgtag caggtgcggc
    17161 ggccgtctga tgccgtctga atcctgtacg gaaattagga tacgataatg agccaaggca
    17221 aaatcgtaca aattatcggt gcggttgttg acgtggaatt tccacgcgac atgattccgc
    17281 gcgtttacga cgctttgaaa ttagacgaaa acggtctgac tttggaagtc caacagcttt
    17341 tgggtgatgg cgtagtccgt accatcgcta tgggcagctc ggacggtttg aaacgcggca
    17401 tgactgtgag caatactggt tcgcccatta ctgtgccggt aggtaaaggt acgttgggac
    17461 gcattgtcga tgtattggga acgcctgttg acgaggcagg tccaattgat accgacaaga
    17521 gtcgtgccat ccaccaagcc gctcctaagt ttgacgaact gtcttccaca accgaattgc
    17581 ttgaaacggg cattaaagtg attgacttgc tgtgtccgtt tgccaaaggc ggtaaagtag
    17641 gtctgttcgg cggtgccggt gtgggtaaaa ccgtgaacat gatggaattg atcaacaaca
    17701 tcgccaaagc gcacagcggc ttgtccgtgt tctcaggcgt aggtgagcgt acccgcgaag
    17761 gtaacgactt ctaccacgag atgaaagatt ccaacgtatt ggataaagta gccatggtgt
    17821 atggccaaat gaacgaacct ccaggcaacc gtctgcgcgt tgctttgacc ggtttgacta
    17881 tggctgaata cttccgtgac gaaaaagacg aaaacggtaa aggtcgtgac gtattgttct
    17941 tcgttgacaa catctaccgt tacactctgg ccggtaccga agtatccgca ctgttgggcc
    18001 gtatgccttc tgcagtgggt taccaaccga cattggctga agaaatgggt cgtttgcaag
    18061 agcgtattac ctctacccaa accggttcca ttacttccat ccaagccgta tatgtacctg
    18121 cggatgactt gactgacccg tctccggcga caactttcgc ccacttggac gcgaccgtcg
    18181 tattgagccg tgatattgcc tctttgggta tttacccggc agttgacccg cttgactcta
    18241 cttcgcgcca attggatccg atggtattgg gtcaagagca ctacgacgta gcgcgcggtg
    18301 tacagtctac tctgcaaaaa tacaaagaat tgcgcgacat catcgccatt ctgggtatgg
    18361 acgaattgtc tgacgaagac aaactggctg taatgcgtgc ccgtaaaatc caacgcttcc
    18421 tgtctcaacc gttccacgtt gccgaagtgt ttacaggttc tccaggcaaa tatgtcgccc
    18481 tgcgcgatac cattgccggc ttcaaagcca tcttgaacgg cgaatacgat catctgcccg
    18541 aacaggcatt ctatatggtc ggcagcatcg aagaagcggt tgagaaagcg aaaaccttaa
    18601 actgaggagg tcggcatgag catcatgcaa gttgaggtgg taagtggcga gcagaaaatc
    18661 tattcaggcg aggcaacatt tatcgttgtt ccgactgtac agggcgaact cggtatttat
    18721 ccgcgacacg agccgattat gagtttggtg cgtcccggtg cgttgcgttt gaccgttccg
    18781 ggcgaggata aagaggtttt ggttgctgtt tccggcggta ttttggaagt acagcctgat
    18841 aaagtaactg tcttggcgga tgttgccgtc cgcagtgcgg aaatggatcg ggcacgtgcg
    18901 gaagaggcga aaaaagccgc agaagcgggc atttcccaag ctaaagacga taaggctttg
    18961 gcggaagcac ataaagcatt ggctgccgca attgcacagc tcaaaacttt ggactatatc
    19021 cgttcgcaca agaaataaac ttgtttggtt tgaaaaagca cgaccgtttg gccgtgcttt
    19081 ttattttccg gatttaaatt aaaaaattat ccatcccctg gtttcaaatc aggctgtctt
    19141 cgagataaat ctattcaagc ggctatggaa acagtaaaat aaaaccttta ttttatcgaa
    19201 caataagcca tgcttacctt ccaacaaatc atcttcaaac tgcaaacctt ctgggcagac
    19261 aaaggctgca ccgtcatcca acccttcgac atggaagtcg gtgccggcac atcccatccc
    19321 gccacctgcc tgcgcgcgct cggccccgag ccttggtttg ccgcctacgt ccaacccagc
    19381 cgccgcccca aagacggccg ctacggcgac aaccccaacc gcctgcaaca ctattaccaa
    19441 ttccaagtcg ccctcaaacc cgcccccgcc aatatccaag acctctatct cgactccctg
    19501 cgcgaattgg gcatcgatcc caaagtccac gacatccgct ttgtcgaaga cgactgggaa
    19561 aaccccaccc tcggtgcgtg gggtttgggc tgggaagtct ggctcaacgg catggaagta
    19621 acccagttta cctatttcca acaagtcggc ggtatcgatt gcacgcccgt actcggcgaa
    19681 attacctacg gcatcgaacg cttggcgatg tacctgcaag gcgtggaaaa cgtctatgac
    19741 ctcgtttggg caaaaacgcc ggacggcaat accgtaagct acggcgacgt gtaccatcaa
    19801 aacgaagtcg agcaatctac ctacaacttc gaatacagcg atgccgactg gctgctgcgc
    19861 cagttcaacg actacgaagc gcaagccaaa cgcctgttcg ccgaagaaaa cgccgacctt
    19921 gccttacctg cctacgagct ggtcctcaaa gcggggcata cgttcaacct tttagacgca
    19981 cgcggcgcga tttccgtaac cgagcgggca acttatattg gacgtattcg tgcattgagc
    20041 cgcgccgtgg cgcaaaaata tatcgaaagc cgtgagaaac tgggcttccc gttgattaaa
    20101 aaataacgat acgtcgtctg aagcaggttt tcaggcgacc tttattgcgt atccattaat
    20161 acaggccgta cggcatatgc aggctttata agcatggcct acggacaaac agaaagtctc
    20221 acatgacaac ccaaaccctt ttaatcgaac tccttaccga agaactcccg ccaaaagccc
    20281 tgaataatct gggcaaccat tttgccgctt ccgttgccga aggcttggaa aaagcgcaac
    20341 tggttgacgg cgcggccgaa tttacggctt atgcctcgcc gcgccgtttg gcggttcaag
    20401 tcaaaaacgt caaagctgtt caggccgatc agaaaatcgt gaaaaaaggc cctgccgtgg
    20461 cgaatgccgt aaaagacggt gcgccgacca aggctttgga aggttttgcg cgcggcgcag
    20521 gcgcgaaaat cgaagacctg accatcgtcc acgacggcag gcaggacgtg tacgcctatg
    20581 aatacgtcca aaccggcaaa ccgttgggcg gacttttgga agacattatc aatcaagctg
    20641 ttaagaagct gccgattccg aaagtaatgc gttggggcag cagcacgttt accttcgtgc
    20701 gccctgttca cgggctgatt gtgctgcacg gcggcgatgt cgtgaacgtc agcgttttgg
    20761 gcctgcaaag cggcaatcaa accttgggac accgctttct ttccgacggc gaaatcatca
    20821 ttgaaaacgc cgacagctac gccgcacaaa tgcgcgggca aggcaaagtc gtcgcttcgt
    20881 ttgccgggcg caaagccgcg attcagacgg cattggaagg gcaggcacgc cgtctgaacg
    20941 cgaccgttgc cgccgatgaa gccctgttgg acgaagtaac cgcgctggtc gaatggcctg
    21001 ttgttttgga agccggtttt gaggaacact tcctcgccgt gcctcaagaa tgcttgattt
    21061 tgacgatgca gcaaaaccaa aaatacttcc cgctgctcga ccaaaacggc aagctgatga
    21121 accgcttcct gctggtctcc aacctgcaaa ccgaaaaccc gtcgcacatc atccgaggca
    21181 acgaacgcgt tttgcgcgcg cgcctgtctg atgccgagtt cttctacaaa caagaccaaa
    21241 aagcgacttt ggaaagccgc ctgcccaagc tggcgaacgt ggtgtaccac aacaaaatcg
    21301 gttcgcaggc cgaacgcatc gaacgcctgc aaagcatcgc cgcccatatc gccaaagcat
    21361 tgggcgcgga tgccgcggca gccgggcgcg ccgcgcgtct tgccaaagcc gacttggtaa
    21421 ctgaaatggt cggcgagttc cccgaactgc aaggcacgat gggcaaatac tacgcccgct
    21481 tggacggcga aaccgaagaa atcgccgaag ctattgagca acactaccaa ccgcgttttg
    21541 ccggcgacaa gctgcccgaa agcaaaattg ccgccgccgt ggcacttgcc gacaaactgg
    21601 aaaccctggt cggcatttgg ggcatcggtt tgattcctac cggcgacaaa gacccctacg
    21661 ccctgcgccg cgccgccttg ggtattttgc ggatgctgat gcagtacggt ttggacgtga
    21721 acgaactgat tcagacggca ttcgacagct tcccgcaagg tttgctcaac gaaaaaacgc
    21781 cgtctgaaac cgccgacttt atgcaggcgc gccttgccgt gttgctgcaa aacgattatc
    21841 cgcaagacat cgttgccgcc gtactcgcca aacagccgcg ccgtttggac gatttgaccg
    21901 ccaaactgca ggccgtcgcc gtattcaaac aactgcccga agccgccgcg ctcgccgccg
    21961 ccaacaaacg cgtgcaaaac ctgctgaaaa aagccgatgc cgagttgggc gcggttaacg
    22021 aaagcctgct gcaacaggac gaagaaaaag ccctgtacgc tgccgcgcaa ggtttgcagc
    22081 cgaaaatcgc cgccgccgtc gccgaaggca atttccaaac tgctttgtcc gaactggctt
    22141 ccgtcaagcc gcaggttgat gccttcttcg acggcgtgat ggtgatggcg gaagatgccg
    22201 ccgtaaaaca aaaccgcctg aacctgctga accgcttggc agggcagatg aacgcggtgg
    22261 ccgacatcgc gcttttgggc gagtaaccgt tgtacagtcc aaatgccgtc tgaagccttc
    22321 aggcggcatc aaattatcgg gagagtaaat tgcagccttt agtcagcgta ttgatttgcg
    22381 cctacaacgt agaaaaatat tttgcccaat cattagccgc cgtcgtgaat cagacttggc
    22441 gcaacttgga tattttgatt gtcgatgacg gctcgacaga cggcacactt gccattgcca
    22501 aggattttca aaagcgggac agccgtatca aaatccttgc acaagctcaa aattc
//
LOCUS       DAXGCP010000023        21671 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.023, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000023 DAXGCP010000000
VERSION     DAXGCP010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21671
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.023"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(3..1313)
                     /locus_tag="ACFJCW_000810"
     CDS             complement(3..1313)
                     /locus_tag="ACFJCW_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HFC4151007.1"
                     /translation="MDISKQTLLDRVFNLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFIGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGYFRVQGAIIITILTITVIASLMGLN
                     EFHGVVGEVPGIAPTFMQMDFKGLFTVSMVSVIFVFFLVDLFDSTGTLVGVSHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPVFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTGDVPPMVWVVAVLWALKFWYLG"
     gene            complement(1449..2627)
                     /gene="ftsZ"
                     /locus_tag="ACFJCW_000811"
     CDS             complement(1449..2627)
                     /gene="ftsZ"
                     /locus_tag="ACFJCW_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HFC4151008.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRSVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFSYEGKRVHVAQAGLEQLREHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDPTPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            complement(2746..3990)
                     /gene="ftsA"
                     /locus_tag="ACFJCW_000812"
     CDS             complement(2746..3990)
                     /gene="ftsA"
                     /locus_tag="ACFJCW_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HFC4151009.1"
                     /translation="MEQQKRYISVLDIGTSKVLALIGEVQDDDKINIIGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIELCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGT
                     VQEREGGGGLLARLKRWIENNL"
     gene            complement(4076..4804)
                     /locus_tag="ACFJCW_000813"
     CDS             complement(4076..4804)
                     /locus_tag="ACFJCW_000813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HFC4151010.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWNVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRHAPDGLPEKESEE"
     gene            complement(4794..5708)
                     /locus_tag="ACFJCW_000814"
     CDS             complement(4794..5708)
                     /locus_tag="ACFJCW_000814"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HFC4151011.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKERGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLYDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKEKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTGH
                     SLVPKSAAVTGVGFADLCIEILKAAHVG"
     gene            complement(5821..7230)
                     /gene="murC"
                     /locus_tag="ACFJCW_000815"
     CDS             complement(5821..7230)
                     /gene="murC"
                     /locus_tag="ACFJCW_000815"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HFC4151012.1"
                     /translation="MMKNRVSNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLSSLGIQVYPGHTAEHVNGADVVVASTAVKKENPEVVAALERQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCV
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKILNTVDALV
                     LTEVYAAGEEPVAAADSRALARAIRVLGKLEPIYCENVADLPQMLMNVLQDGDVVLNM
                     GAGSINRVPSALLELSKQI"
     gene            complement(7385..8452)
                     /gene="murG"
                     /locus_tag="ACFJCW_000816"
     CDS             complement(7385..8452)
                     /gene="murG"
                     /locus_tag="ACFJCW_000816"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HFC4151013.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRVRGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGIRGNGIKRKLMLPFTLYKTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPVPAERFQGREGRLKILVVGGSLGADVLNKTVPQALALLPEEVRPQMYHQ
                     SGRNKLGNLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            complement(8456..9727)
                     /locus_tag="ACFJCW_000817"
     CDS             complement(8456..9727)
                     /locus_tag="ACFJCW_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HFC4151014.1"
                     /translation="MGDGVHTLLLDRPIVRDGRKFDAPLLWMVVLMTAFGLLMIYSAS
                     VYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRLVPWIFALSGLLLVA
                     VLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRREEVLRSMESLGWQSI
                     WRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLIMVQPDFGSFVVITV
                     ITVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAFLDPWKDPQGAGYQL
                     THSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFGFFGMCVLIFCYGWL
                     VVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGALPTKGLTLPLMSYG
                     GSSVFFMLISMMLLLRIDYENRQKMRGYRVE"
     gene            complement(9906..11243)
                     /gene="murD"
                     /locus_tag="ACFJCW_000818"
     CDS             complement(9906..11243)
                     /gene="murD"
                     /locus_tag="ACFJCW_000818"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HFC4151015.1"
                     /translation="MTFQNKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKAERVA
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAELQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVMNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDVFCRAMKRAGREVKRFSLEHEADFWLERGTGCLKQGNEDLISTQDIPLQGLHN
                     AANVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALKDKAKGVFLIGVDAPQIRRDLDGCGLN
                     LTDCVTLEEAVQTAYAQAEAGDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            complement(11328..11708)
                     /locus_tag="ACFJCW_000819"
     CDS             complement(11328..11708)
                     /locus_tag="ACFJCW_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC4151016.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWAGDVSDFRENLQAAEQGNAAAQ
                     FNLGVMYENGQGVRQDYVQAVQWYRKASEQGDAQAQYNLGLMYYDGRGVRQDLALAQE
                     WLGKACQNGDQNSCDNDQRLKAGY"
     gene            complement(11833..12915)
                     /gene="mraY"
                     /locus_tag="ACFJCW_000820"
     CDS             complement(11833..12915)
                     /gene="mraY"
                     /locus_tag="ACFJCW_000820"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HFC4151017.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAVIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVVGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVAIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            complement(13160..13336)
                     /locus_tag="ACFJCW_000821"
     CDS             complement(13160..13336)
                     /locus_tag="ACFJCW_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151018.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMRTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVPAR"
     gene            complement(13339..14697)
                     /gene="murF"
                     /locus_tag="ACFJCW_000822"
     CDS             complement(13339..14697)
                     /gene="murF"
                     /locus_tag="ACFJCW_000822"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HFC4151019.1"
                     /translation="MKPLDLNFICQALKLPMPSENKPVSRIVTDSRDIREGDVFFALA
                     GGRFDAHDFVGGVLSAGAAAVVVSREDCAALGGALKVDDTLAALQTLAKAWRDNVNPF
                     VFGITGSGGKTTVKEMLAAVLRRRFGDDAVSATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNALRAHVGCGFDGVGDIAKAKSEIYAGLCSDG
                     MALIPQEDANMAVFKTATFNLNTCTFGVDSGDVRAENIVLKPLSCEFDLVCGDERTAV
                     VLPVPGRHNVHNAAAAAALALAAGLSLNDVAEGLQGFSNIKGRLNVKAGIKGATLIDD
                     TYNANPDSMKAAVDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLSHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(14822..15957)
                     /locus_tag="ACFJCW_000823"
                     /pseudo
     CDS             complement(14822..15957)
                     /locus_tag="ACFJCW_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
     gene            complement(16048..16467)
                     /locus_tag="ACFJCW_000824"
                     /pseudo
     CDS             complement(16048..16467)
                     /locus_tag="ACFJCW_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232821.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(16490..17968)
                     /locus_tag="ACFJCW_000825"
     CDS             complement(16490..17968)
                     /locus_tag="ACFJCW_000825"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HFC4151020.1"
                     /translation="MFSKLSPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGRFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLFGEETAIIGTVGNGFWGALEETAHTTPAP
                     VDVQTLLYRFRQQGATAAAMEVSSHGLDQSRVNGVPFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINTDDGYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGMEAVFQTPWGEGKCRTRLLGRFNAQNLAACIALLCANGYPLDKVLDVLAKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALSTLQEIKPQGAALWCVFGCGGNRDCG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(17993..19741)
                     /locus_tag="ACFJCW_000826"
     CDS             complement(17993..19741)
                     /locus_tag="ACFJCW_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HFC4151021.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAMAVLFACLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQALPATRGTVSDRNGAVLALSAPTESLFAVPKDM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLYGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPQNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVR
                     MHSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPLSF
                     EKQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKLVNG
                     RYVDNKHVGTFIGFAPAKNPRVIVAVTIDEPTANGYYGGVVAGPPFKKIMGGSLNILG
                     ISPTKPLTAAAVKTPS"
     gene            complement(19802..20065)
                     /gene="ftsL"
                     /locus_tag="ACFJCW_000827"
     CDS             complement(19802..20065)
                     /gene="ftsL"
                     /locus_tag="ACFJCW_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HFC4151022.1"
                     /translation="MNKSNFFLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRVQQARLANHEAIRAAAEKQNLHPPVSGNTFMVEHQR"
     gene            complement(20092..21048)
                     /gene="rsmH"
                     /locus_tag="ACFJCW_000828"
     CDS             complement(20092..21048)
                     /gene="rsmH"
                     /locus_tag="ACFJCW_000828"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HFC4151023.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIVRAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHEPLPSWAAVREADL
                     PEPPLKIVGRALKPGEAEIAANPRARSAVLRVAERTAGPIPE"
     gene            complement(21045..21500)
                     /gene="mraZ"
                     /locus_tag="ACFJCW_000829"
     CDS             complement(21045..21500)
                     /gene="mraZ"
                     /locus_tag="ACFJCW_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HFC4151024.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVATLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLVPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLSQTDLQL"
BASE COUNT         5066 a         6241 c         5420 g         4944 t
ORIGIN      
        1 aatcagccca aataccagaa tttcaatgcc cacaatacgg caacaaccca taccataggc
       61 ggcacgtccc cagtccggcg acacaaaagt ttgaccacgg catagctgat gaagccgaag
      121 gcgatgccgt ctgcaatcga ataggtaaac ggcatgaaga caatggtcag gaacgcgggc
      181 gcggcttcag tcatatcgtc ccaatcaatg tccctcgcac tgcggagcat ctgcgtgccg
      241 acataaagca gtgcgggcgc ggtggcaaat accggaacac ttttcgccaa tggggagaac
      301 atcagacacg ccagcatcaa tacgccgacg gtaaccgccg tcaggccggt ccgtccgcct
      361 gccgatacgc ccgccgcgct ttccacataa ggcgtggttg aagaagtacc caaagccgca
      421 cctgccacaa tggcggtaga gtctgcaagc agtgcgcgtt tcaggcgggg cagcttaccg
      481 tccaccagca gtccggcacg gtgggatacg ccgaccagcg ttccggtact gtcaaacaaa
      541 tcgaccaaga agaagacgaa aatcacgctg accatgctga cggtaaacag acctttaaaa
      601 tccatctgca taaaggtcgg cgcaatgccc ggtacttcgc cgaccacgcc gtgaaactcg
      661 ttcaaaccca tcaggctggc aatgacggta atcgtcagaa tggtgatgat gattgcgcct
      721 tgaacgcgga aataccccaa tacgaccacc atgacaaaac cgaacaatgc caacagtgcg
      781 ctgggctgat gaatatcgcc caagccgacc aaggttgccg gattggcaac gataatgcct
      841 gcgcctttca gggaaatcag tgccaaaaac aaaccgatac cggcggcaat cgacattttc
      901 aaacccatag gcagtgcgtt gaccagcatt tccctgactt taaaaaagct gaacaggatg
      961 aaaatcagac cggaaatgaa caccgcaccc aacgccacct gccaaggcac gcccataccc
     1021 ttaacgacgg caaaggtgaa ataggcattc agccccatcc ccggggcaag cgcaatcgga
     1081 tagttgccga taaaacccat aacaaaacag ccgatggcgg atgcgataca ggtggcgacg
     1141 aataccgccc ccatatccat tccggtctcg cccaaaatca ggggattgac gataacgatg
     1201 tagcacatcg tcaaaaaggt cgtcaaaccc gccatcaact cggtacgtac cgtcgtaccg
     1261 tttgccttca ggttaaaaac cctatccagc aatgtttgtt ttgaaatatc catatctagc
     1321 agtccgtttc aagtaaaaaa tctgaacccg cacaccgcaa accgcacagg attcggcata
     1381 ttgaaaaata tacctcccaa atcgggaaaa ccggttcggg aggcaataag tttacggcag
     1441 acggcacatt atttgtctga attgtgttga cgacgcaaaa ttgcaggaat ttcaaaatcg
     1501 tcaaggacag actggttatc gaaatccgct gctgtcagat tcatggtgcg gataccgcga
     1561 ttggtgcgga tcataccttc gacattgtgg ctttgctcct gtttggacgg ggcaaccgct
     1621 tctacttccc ttgccggagt aggatcgacc gctccttttt ctttcagacc ggtagcgata
     1681 atggtaatcc ggatggcatc ttcgctcatg gtctcgtctt cagcggcacc gaatttgcat
     1741 tccaaatcgg gatgcgcgct ttggttgacg attttcatga cttcagacaa ctcggacatt
     1801 ttcaggcaac ccggagcagt cgtaatattg accagcacac cgcgtgcacc atccaaagtt
     1861 acatcgtcca gcagcggact ggaaatggcc tggtcggtcg ccatacgcgc acggtcgata
     1921 ccttgggcat aacccgaacc catcatagcg ataccgcggt tgctcatcac ggttttcacg
     1981 tcggcaaagt cgaggttgat gatttcgctc gggcaagtta ccacttcgga aatgcctgcg
     2041 accgcatcgc gcaatacatt gtccgccgcg cggaaggctt cgcgcatagt tacgtcttca
     2101 cccaatgcgg tcatcagttt gtcgttcggg atgataatca gcgaatcgac gtgttctctc
     2161 aactgttcca accctgcctg tgccacatgg acgcgtttgc cttcataaga aaacggacgg
     2221 gtaactacgg caacggtcag aatgcccaaa gacttggcaa tctcagcaac aaccggcgcg
     2281 gaaccggtac cggtaccgcc gcccataccg gtcgtgataa acagcatatt ggcaccgcga
     2341 atggcttctt caatggcctc ccgatcttcc tgtgctgccg cacggccgat atcgggattc
     2401 gcacccgcgc ccaaaccgcg tgtcagattc gtacccaact ggattctctt cgccgcatgg
     2461 ttttttgcca aagactgcgc atctgtattg gcactgataa actccacact gcgcacattg
     2521 ttggcaacca tgttattgat tgcattgcaa ccgccgccgc ccaagccgat tactttaatt
     2581 accgcagggc tgactgccga ttctgccacg tcgtaaacaa attccattca aaaactcctg
     2641 atcgccccgt tcagaggacg gtttaaataa attattattt attatataag aagtatctta
     2701 ctgctggcaa aatacttctc acctgtcaaa cggcaatcca actgttcaga ggttgttttc
     2761 aatccaccgc ttcaatcttg ccaacaaacc gccgccccct tctctctctt gcactgtacc
     2821 gttttccggt tgcggcaagt ttccttccag cttgcatgct gcatgaagca gcccgatagc
     2881 ggtagaaaag cgcggtgtgc ggacacggtc ggacaaaccg cccatttctt ggggcgcacc
     2941 ggtgcgtaca ggcaaatcga agattttttc ggcaaattcc acaatcccgg tcatcatgga
     3001 cacaccgccg gtcagaacga tacccgcatt cagcacttct ttggggaaac ccgatttttg
     3061 cagttcgccc agcactacgc caaaaatctc ctgaatacgt gcgctgatga ttgctgccaa
     3121 aaccttactg gaaacctgac gcgatgtccg gtcacccacg cccggaactt caatcatctc
     3181 gcccaagcct tccgtatcgc atgatgccac gccataatgg attttaatgt actcggcggc
     3241 atcgagaggt gttctcaacg atttggacaa atctttggta atcagattac caccggccgg
     3301 aatgacggac gtatggcgga tggcgccgtt catataaacg gcaatatcgg tcgttccgcc
     3361 accaatgtcg atgacgcata cgccgaggtc tttttcatct tcagtcagca ccgcctgccc
     3421 gcttgccaac ggttgaagca tgatctgatc gcttttcaag ccgcacagct cgatacattt
     3481 ttggacattc tgcactgccg tacttgcacc ggtaatgatg tgcacccgcg tatccagacg
     3541 cacaccgctc ataccgatgg gctcccttac accaagttgg gtgtcgataa tgtagtcttg
     3601 aaccacggca tcgagaattt tttgatcggg cgggatattg attgcctttg ccgtttcaat
     3661 ggcgcggtcg atgtctgcct gtgttacttc tccgtctttg attttaacca caccttgcga
     3721 attaaggctg cggatgtggt tgcctgcgat acctgtggta acgtgggtaa ttttggtatc
     3781 cgccatcagc tcggcatcat tgaccgcctg cctgatggct tggacggtgg catcgatatt
     3841 ggttaccatg cccgcgcgca agccccgtga aggagcctgc cccaaaccga tgatgttgat
     3901 tttgtcgtca tcttgaactt ccccgatcag tgcgaggact ttagacgtac cgatatccag
     3961 tacgctgatg tatcttttct gctgttccat tgttcgtctg cccttaaaac tgattgaaat
     4021 ttgcgtcgca ccgtttcaga cggcacggcc gtaatatgtc cgatacctgt tcccactatt
     4081 cttcggattc tttttcgggt aaaccgtcgg gagcatggcg gactgaaaat ccgtccttat
     4141 acctcatatc cacataggat aaccgatttt tattcttacg caacagatgc tgccacgctt
     4201 cggtaaaaag ccggaggcgt ttcatctcgt tttcccgtcc gagcctgacg gtgatgccgt
     4261 tgtccaaaac gacattccac gccgaacgtg ccgtataggt catctctttg atgcccaaac
     4321 cctgttttgc caaaacagtc gaaaattcgt cataacggcg gagcatttcg gcagacgttc
     4381 cttccgcgcc tctgaatacc ggcattccgg gtctgtccaa gcgggcttca aaaacattgc
     4441 cttcgccgtc caccaaggca tggtcgcccc aacgtgcaac cggcttgcgc tcggtcagga
     4501 cgacctcaac cgtatcggga aaacggcggc gcaccatgac cgacgcaatc cacggatacc
     4561 ggcggtaggc ttcctgtgcg ccattgatgt ccgtcctcaa aatattccca tggatgtatt
     4621 ctttcgccaa actgcccaat gccttcttat cggaataaac caggttgccc ttcagcgaca
     4681 cctgcttgac gggcagatga ttcgaattgt aaaaccaaac cagcccggac gcagcaagca
     4741 gcatcgccat catgacaagc agccagcgcg tcagccgttc catcgcttcg gcattatccc
     4801 acatgtgcgg ccttcaaaat ttcaatacat aaatcggcaa aacccacgcc cgtaacggca
     4861 gcggatttcg gtactaaact atggccggtc ataccgggca gggtgttgat ttccaacaga
     4921 tagagtttgc cgtcggtatc tttgaggaaa tcgacgcgca cgcagccttc cgcaccgatt
     4981 gcctgtgcgc cgcgaaccgc cagttcgcgc atcaggcttt cttcggcttc ggtcaaatct
     5041 tccgaaggac attgataaat ggtgtcgtct cggttgtact tggcttcgta gtcgtaaaac
     5101 tcggttgcgg ggatgatgtg tatgccgggc agccctttgc cgttcaggac ggggcaggaa
     5161 tattcgccgc cgccgataaa acgttcggca atgatttcgc cctgaaggtg tttcaattct
     5221 tcgtaaacgc ttttcagacg gcctttttct ttgactttta ccacgccgac gctgctgcct
     5281 tcggccgccg gcttcacaaa catcggcaga cccaattttt cttcgacggc atcgaaatcg
     5341 gtatcatcgt acagtacggc gaactcggga acgggtaatc ccaatgcctg ccaaatcagt
     5401 ttgcagcggt atttgtccat gccgatggcg gaggcggcga caccgctgcc ggtataggga
     5461 atgcccaaca gttccaatgc accctgaaca gccccgtctt cgccgtaagt accgtgaagg
     5521 atgttgaatg ccgtctgaaa gccccgctcc ttcagttcgg ataacggcgt ttccttaggg
     5581 tcgaaggcgt atgcgtctat gcctttgctt tttaaggcgt tcaaaatggc ggtaccgctg
     5641 tccagcgaga tttctcgttc gctggaaaaa ccacccatca atacggccac tttgccaaaa
     5701 ttctgcattg tttttgttct ttcctaattg ctttatgctt gttgtcagag gtcgtctgaa
     5761 acctgattgc ggtttcagac gacctttatt atgatgttcc gtctgtcagg cgggtgtatc
     5821 tcaaatctgt ttcgacaatt ccaacagcgc ggagggaacg cggttgatgc ttcccgcacc
     5881 catattcaac acaacatcgc catcctgtaa aacattcatc agcatttgcg gcaggtcggc
     5941 gacgttttcg cagtaaatcg gctcaagttt gcccaatacg cggatagcac gcgccaaggc
     6001 gcgggagtcg gcggcggcaa ccggctcttc gccggcggca taaacttcgg tcagtaccag
     6061 cgcatcaacg gtattgagga ttttggtaaa gtcttcaaac aaatcgcgcg tgcgggtata
     6121 gcggtgcggc tggaaggcga gcaccaaacg tttttccgga tacgcgccgc gtgcagcggc
     6181 aagggttgcc gccatttcga cggggtggtg tccgtaatcg tccaccagca aagcggtccc
     6241 gccgtttggc aacttgatgt cgccgtattt ttggaagcgg cggccgacgc cttcaaagcc
     6301 gagcaagcct ttttggatcg cttcaaccga tgcgccgact tccagcgcca cgccgatggc
     6361 tgccaatgcg ttcagcacgt tgtgtctgcc gggcatattc agcacgactt caaacgaccc
     6421 ctgctcatgt cctttcattt gaacatggac ggtgaatttc atttgcgcgc cgacgttttc
     6481 gatgtcggtg gcgtagatgt cggcggtatc gtccaaaccg taagtagcat aaggtttgct
     6541 cactttgggc aaaatcgcgc ggacgtgttc gctgtcaaca cacaaaaagg ctttgccgta
     6601 gaagggcata cggtggatga aatcgataaa cgcctgatgc agtttttcga cgctgtgccc
     6661 gtaggtatcc atatggtctt cgtcgatatt ggtaacgacg gacataatcg gggtcagatg
     6721 taggaaagag gcatcggatt cgtcggcttc ggcaacgatg tattcgcctt tgcccaagcg
     6781 ggcgttggtg cctgcggcgt tgagtttgcc gccgataacg aaagtggggt cgagtcctgc
     6841 cgcgccgagg atggaggcgg tcaggctggt ggtcgtggtt ttgccgtgcg taccggcaat
     6901 ggcgatgccg tcacggaagc gcatcagctc tgccagcatc aaggcgcgcg gaataacggg
     6961 aatttgccgc tccaacgcag cgacaacttc gggattttct ttcttgacgg cggtagaggc
     7021 aacgacgaca tccgcaccgt taacgtgttc tgcggtatgg ccgggataaa cttgaatgcc
     7081 caggctgctc aaatgctcgg tagcggcatt tcgcgcctga tccgaaccgg aaactttaaa
     7141 gcccaaattg tgcaagactt cggcgatacc gctcatgccg acgccgccga taccgacaaa
     7201 atggatgttg cttactcgat ttttcatcat aatgttgcgt tccgattggt ttttagtgcg
     7261 taaaggcgtt attttaaagg tctgaccgtt tgcgcaccat agttttctga caaatatata
     7321 gcggattgaa ataaaaaaca tccatgccgt ctgaacggct tttcagacgg catggttcgg
     7381 cagtttacgc cgcacacgca atcgcggctt cggcaacgtc atccgcgctg tgcggcaatg
     7441 ccaacgtacg ggcgttttcc gcccatttga ggcatttttc gcggttgagg ctgccgagga
     7501 tttcggcgag tttttccgcc gtcaactggg tttgcggcaa cagcagcccc gcttctgcct
     7561 gcaccatgaa acgcgcgttg gcggtttgat ggtcatcaac ggcgtgagga tacggcacta
     7621 acaacgcgcc cagccccgcc gccgtcaact cggcaatcgt cagcgcgccg gcacggcaaa
     7681 tcaccaaatc ggcatcacgg taggcggaca ccatgtcggt aataaattcc acgcattccg
     7741 ctttcacgcc caacgcgtca taatccgcct gaagattgcc cagcttgtta cgccccgact
     7801 ggtggtacat ctgcgggcgc acctcttcag gcagcagtgc caacgcctgc ggtacggttt
     7861 tgttcaaaac gtccgcaccc aaactgccgc cgaccaccaa aattttcaga cggccttcgc
     7921 gcccttggaa gcgttcggca ggcacgggca ggttgctaat atcggcgcgg acggggttgc
     7981 cgaccaaacc gccttcgtgg ctgaacgctt tcggaaaagc gtacaacacc cgtttcgccc
     8041 agcgcgacag gtggcggttg gacaagcctg ccacggcgtt ttgctcgtga atcacaatcg
     8101 gcacgcccaa gagtttcgcc gccagaccgc cgggaaaggt aacaaaaccg ccgaagccga
     8161 tgacgcactc gacacggtgt ttgcggataa tccgctgcgc ttcgcggacg gttttgtaca
     8221 gagtaaacgg aagcatcagc ttgcgtttga tgccgttgcc gcgtattcct ttaatcgcca
     8281 gcgtttccaa gcgtatgccg tattgcggca cgatgcgctc ttccatcgaa tccttgctgc
     8341 ccagccaaat tacatgatga ccgcgcacgc gcaatgaatc cgccacagcc agagctggga
     8401 aaatgtgtcc gcccgttccg cccgccatca gcataaaggt tttaccgccc atgatttact
     8461 ccacccggta accgcgcatt ttctggcggt tttcataatc gatacgcaac agcagcatca
     8521 tgctgatcag catgaaaaag actgacgaac cgccatagga catcaacggc agcgtcagac
     8581 ctttggtcgg caaagcaccg atgttcacac cgatattgaa gaaactttgg ataccgatcc
     8641 aaatgccgat acccgaagcg atataggcgt tgaaagtcaa acccaaatcg cgcgactgct
     8701 tgccgatgga aaacgcccgc accaccagcc agccgtaaca gaatatcagc acgcacatcc
     8761 cgaagaagcc gaattcttca gcgatgatgg caaaaataaa atcggtatgc gcttccggca
     8821 gaaagccgcg tttgctcaaa ctcgcaccca aacccatacc gaaccactct ccgcgcccga
     8881 ttgccatcag agagtgggta agctggtagc cggcaccctg cgggtctttc cacgggtcca
     8941 aaaatgccac tacccgctgc acacggtagg gagcggcggt aatcatcagc accatcccac
     9001 ccaagacgct gcctaccagg acaaaaaaat atttccacgg caatcctgcc agaaacagca
     9061 ttccaacggt aatgacggta atgacgacaa acgaaccgaa atccggctgt accattatca
     9121 gcaccaaacc gaacgccacc agcataatcg gcaggatgat cgcccggaaa cggccgtaca
     9181 tttctaatgt ttcacgacgt gcctgcggat tggtggcgga cataatcagg ttggccgtcc
     9241 cccgccaaat cgactgccaa cccaaacttt ccatgctgcg caacacttct tcacggcgcg
     9301 tgaacaggct tgccaaataa aggatgactg ccagcttgaa cagctcggtc ggctggaaat
     9361 tcaacggacc caaaggtatc caacgggtcg cgccattgat ttcgcgcccg gcaatcaata
     9421 cggctaccag caacaggccg gataaggcaa aaatccacgg cacaagccgc cgccatgtcc
     9481 tcatcctgca aagaaaccat aaaaaaccgc tcgctataag gccggcaacg acgaaccccg
     9541 cctgcctggt caaatagaaa aactgatcgc cgccttcctt cgatgccaaa tacacagaag
     9601 ccgaataaat catcagcagg ccgaacgccg tcatcagcac caccatccac aaaagcggcg
     9661 cgtcgaattt cctgccgtcg cgcacaatcg gcctgtcgag cagcagagtg tggacaccgt
     9721 cgcccacttt taccaatact tccgaaatct tcaaaaaacc acctgccagt ctgtttgcac
     9781 ctgccgcaaa gggcaaaaat ttcagacggc agacaatgcc gtccgaacat acgatacatc
     9841 ccaaatcggt attctaaatc tttacttgcc gcccaacaat gacggcgttt gcgtttcgga
     9901 cggcatcaca aagccttaaa cgcttcgata aacacttccg aacggtgcgc gtagccttta
     9961 aacatatcga aactcgcgca ggcggggctg agcaagacaa tatcgcccgc ttcggcttgg
    10021 gcgtatgccg tctgaaccgc ctcttccaaa gtgacgcagt cggtcaggtt caagccgcag
    10081 ccgtccaaat cgcggcggat ttgcggcgca tcgacgccga tcaggaacac gccttttgcc
    10141 ttatctttca acgcgtcgcg caggggcgtg aagtcctgcc ctttgcccat gccgcccaaa
    10201 atcacgaaga gcgggttttg caaaccggca atcgcggcgg cggtcgcgcc gacattcgtg
    10261 cctttgctgt cgtcgatgaa taccacgccg tttttctcgc cgattttttc cacacggtgc
    10321 ggcaagcctt ggaaggtttt gacgtgttcc agcaatgctt cgcgcggcaa accgacggcc
    10381 tcgcacaaag ccacggcagc cataacgttg gcggcgttgt gcaaaccttg cagcgggatg
    10441 tcttgcgtag aaatcaaatc ttcattgcct tgttttaaac agcccgtccc gcgttccaac
    10501 caaaaatcgg cttcgtgttc caaggaaaac cgtttcactt cacgccctgc ccgtttcatg
    10561 gcgcggcaga acacgtcgtc cgcattcaaa acctgcactc catcgccacg gaaaatcttg
    10621 gctttggtat gcgcgtagtc gagcaaatcg tcgtagcggt cgagatggtc ttcggaaatg
    10681 ttcatcaccg tcgccgcagt cgggcgcagg ctttcggtgt tttccagttg gaagctggaa
    10741 agctccaaca cccacacgtc cgcctttttg ccttcgcgct gcaattctgc ctccaaaacc
    10801 ggcgtaccga tattgcccgc aatgacggta tccagcccgc acttgatgca gagatagccg
    10861 accaggctcg ttaccgtggt tttgccgttg ctgccggtaa tcgcaatcac cttgtcgccg
    10921 cggcggttca caatgtccgc cagcaattcg atgtcgccta gcacgcgccc gccgttttgc
    10981 ttgaacgcct cgatatccgg ctgccgctcg ctgatgccgg gactgagcgc cagaatatcg
    11041 aaaccgttgt ccaacgcatc tttcagacga cccgtgtaaa acaccagccc gtcaaacatc
    11101 ttaccgattt gcgccacgcg ctcggctttc agctccgcat cataagcggc aacctccgcg
    11161 ccgtttttgc gcagataggc aatcatggaa atacccgtgc cgccaagtcc ggcgacgagg
    11221 atttttttgt tttggaaagt cattttggtt ttgtcctaaa acaaatcata ttgggcagga
    11281 gacgtccgcc cttgcccaag ccgctttcag acggcatcgc gagccgatta ataacccgcc
    11341 ttcaggcgtt ggtcattgtc gcagctgttt tggtctccgt tttgacaagc cttgccaagc
    11401 cattcttgag cgagcgcaag gtcttggcgc acgccgcgtc catcgtaata catcaagccc
    11461 aaattgtatt gggcttgggc atccccttgt tctgaagcct tgcgatacca ctgcactgcc
    11521 tgtacataat cttgacgaac tccttgtcca ttttcataca tcacgcccaa attgaattgg
    11581 gctgctgcat ttccctgttc tgccgcctgc aagttttccc gaaaatccga tacgtcaccc
    11641 gcccacaccg cttggttcaa gcccaaggca atcagggcgg cggcaagcca tttgactgtc
    11701 tgtttcatgg ttttctcctg ttttagtata aggcgggttt cagccgccgt taacgatagg
    11761 acggggcgga ttgccgccgc aggtttattg cgcgttcaaa tgccgtctga aaggtgttcg
    11821 gacggcatag gttcagcgaa ttttgagggt actcaaaccg atcaatacca agacgatggt
    11881 aataatccag aaacggacga cgacttgggt ttctttccag cctttttgtt cgtaatggtg
    11941 atgaatcggc gccatcagga agatgcgttt tttggttttc ttgtaccagc cgacctgaag
    12001 cataacggac acggcttcta cgacgaacag accgcccata atgacgagga caaattcttg
    12061 gcggacgatg acggcaacgg taccgagcgc ggcacccaat gccagcgcgc cgacatcgcc
    12121 cataaagact tgcgcgggat aggcgttgaa ccacaaaaat ccgaggcacg cgccgcacat
    12181 ggcggtgcag aatatagcga cttcgttcgc gccggcgaca tagggaagct ggaggtattg
    12241 ggaaaattgg tagtgtccgc tgacgtaggc gaaaatggcg agcccggcgg caacgaggac
    12301 gacggggaag gcggcaaggc cgtccaagcc gtcggtgagg ttgacggcgt tggatgtgcc
    12361 gacgatggtc aggtaagaca acaccaaaaa gccgaccacg cccagcggca gggcgatttg
    12421 tttgaaaaac gggacaatca aaatattgtt ggcggaattg gcggcaaggt aaaacaatgc
    12481 caaaccggcg ataacggcaa cgcttgactg ccacaccatt ttgaatttgg cggacacgcc
    12541 gttggggtct ttataaacga ctttgcgcca gtcgtcgtaa aaaccgagcg caccggtggc
    12601 aagcagtacg cccaagagaa tccagatata cgggttcgcc cagttgcccc acaacagggt
    12661 ggacacggta atggcggtca gaatcagcga accgcccatc gtcggcgtgc cgtttttgac
    12721 gaggtgggtt tgcgggccgt cggtacgcac tgcctgcccg catttgagcg cggtcagcct
    12781 gcgtatcgtc cacgggccga acatcaggga aaacgccaag gcggtcaacg ccgccataac
    12841 ggcgcggaat gtggtgtatt gaaaaatatt cagaccggtt aaccagttgc tgaaatgtgc
    12901 gagccataaa aacatggggc ttcctttttt gttttgtcgt tatagcggat taacaaaaac
    12961 cggtacgtcg ttgccccgcc ccggctcaaa gggaacggtt ccctaaggcg cccaagcacc
    13021 gggcggatcg gttccgtact atccgtactg tctgcggccc gccgccttgt cctgattttt
    13081 gttaatccgc tatacatcgg gcttgcgccc gcttgaggtt tgcttgctgt ccggcaaggt
    13141 ttcggacggc ttttgcagat taacgtgcag ggactttccc aatcacgcaa atcgggtagc
    13201 tccccggatt tttgccgccg cccaagtcta aacataaatc ttcataaaga tacgcctgcg
    13261 tccgcattcc ggcataaaac gcgccgacca gcgcggcaat cagcaataag gctttaaaaa
    13321 aacgtcggct tttcattttc acttatcctc caatgcctcg accacttctt ccatctgcat
    13381 aaagcgcgaa cctttcacca acacggtggc gcgttcgggc aaatcgtggc tcaacacttg
    13441 aatcaacggg tctttggcgg cgaaccacaa accgtccgcg ccaaattttt ccgccgcttc
    13501 gacgctgttg tcgccgacaa aataagccgc ttcgatgcct tggtcgcggg cgtacgcgcc
    13561 gacttcggcg tgcatggcgg cggcttcgtc ctcgcccagt tcgcccatat cgcccatcac
    13621 gaaaatgcgc ggcgcaggca tacgcgccaa cacgtcaacc gcggctttca tactgtcggg
    13681 attcgcatta taagtatcgt caatcagggt tgcgcccttg atgccggctt tgacgttcag
    13741 acggcctttg atgttgctga agccttgcaa accttccgcc acatcgttca aactcaaacc
    13801 ggcagccaaa gccagcgcgg cggcagcggc ggcgttgtgg acattgtggc ggccgggaac
    13861 aggcagcacc acggcagtgc gctcgtcgcc gcacaccaaa tcaaattcgc acgacaaagg
    13921 tttcagcacg atattttccg cgcggacatc gccgctatcg acgccgaaag tgcacgtatt
    13981 caaattaaac gttgccgttt tgaagacagc catattggca tcttcttgag gaatcagtgc
    14041 catgccgtct gaacataagc ctgcataaat ctcgcttttc gctttggcaa tatcgcccac
    14101 tccgtcgaaa ccgcatccga catgggcgcg cagggcgttg ttgaccaaag cggcatcggg
    14161 tttggcgatt tgcgttaaaa ccgccagttc gccaaaatgg ttcatgccca tttcaatcac
    14221 ggcatagcgg tgtttttcgt ttaatttcaa taaagtcagc ggcaatccga tgtggttgtt
    14281 gaagttgcct gccgtcgccg aaacggcatc atcgccgaaa cggcggcgca ataccgcagc
    14341 cagcatctcc ttcaccgtcg tcttgccgcc cgaaccggta atgccgaaca caaacgggtt
    14401 cacattatcg cgccacgcct tcgccaacgt ttgcaacgcg gcaagcgtgt catcgacttt
    14461 caacgcgccg cccaaagccg cgcaatcttc gcgcgaaacc acaaccgccg ccgcgcccgc
    14521 agacaatacg cctccaacaa aatcatgcgc gtcaaaccgc ccgcccgcca atgcgaaaaa
    14581 cacatcgcct tcccgaatat cgcggctgtc ggttacgatg cgcgacacgg gtttgttttc
    14641 agacggcatc ggaagcttga gggcttggca gatgaaattt aggtccagtg gtttcatatt
    14701 tgctttcgtt aatattcggg cggcggacac atcggtagcg gctgattttt ttatcgcctg
    14761 ttttgctgtg gtaaaacaca gattattttc ccattctcat tcggcatttt ttctgtacgt
    14821 atcatttttt agacgtattt ttagccgatt tgccttttcc cgcataccac ggcgcggggt
    14881 cgtcggactg tctgtcgata aaggcaaggt tattgccttc gcccggcaca tcggggacat
    14941 tcccccaaaa atcatagccg tcatcgggca actcgtcggt ttcgataccc gtccaactgc
    15001 cgaatccgcg taaaaaatta aacgcgctgc gcctcacttt aatcatttcg cgccgcgtgt
    15061 catcggacga aattttaacc agcggcacgc cgtagctttg acgcttccac tcgccgtgtg
    15121 tcaacgttcg ctcgccgcct ttgccgacat gcatcaaacc gtggtcggaa aagtaaacca
    15181 aagaccagct ttctttattt tcattcaata tcttaaccgt atcttctaaa aatttatcgg
    15241 tttgcgcgat ggtggaaaca tagcaggata ttttttcagt ttgatactga aaccgccgcg
    15301 catccttatc caaacgtgtg caaaaatcac tgtgcgaacc catcaggtgc atcacaatca
    15361 gccgaggctt cgtgcctgca tttcctgtca aaacccgttt gaacgccggc aacaaaaggc
    15421 ggtcgctcaa ccccgcgctt ttgccataat cacccctttg ggtaaaccac ggataatcgc
    15481 tgcgtagggc ataggtggaa atttcgttgg caaaatgccc caacattcct tgattagaca
    15541 gccacgccgt ccgaaaaccc gcctgcttcg ccaagctgac aatgttattg ttcggctctc
    15601 ccggcagccc caaagtctgc ggcagcgaaa gattcgtcgc gtgggcggtc gattggtaac
    15661 cgtttatcaa cagccctttg gtccgactca aaaaaggcgt atcgggcaat gggaaaccgt
    15721 aaacattcat ataatccgaa cgcgcgctct caccgataac cacaacataa tttttatact
    15781 tgggcgcaac atgacggata tgccatgttg acgctttttt gctgcttcca aaatgtgggc
    15841 gcgcttggcg gcatattgtg ccggcgcgga agccaaatcg taatacaggt cgaaaatatt
    15901 caacaacagg ccggcatcag gttctcgcca atctttatcg ccggcgattt tctccatcac
    15961 cgcgcaggac aaaatcaaag tcaataatat ggtcagccat attttgctgc ggcgtttata
    16021 gttttttacg tcagcaaata cccccacaga tacacaatat ttccaaactg tcaagccaaa
    16081 aatgaaaaat aatgcctgca caaaataaag cgacccggga agattgccga caaattcacg
    16141 cgcctcggca ggattgcttt ccaatatcga accgactatc tgataagaag gcgcaccata
    16201 cagccagccg accggcaaat atagggcggt tgtgccgacg taaatcagta aaacaactga
    16261 agaaacgcgc gggaagccgc gtgccaataa taataaaaat acaaccgaag ccaaagcgcc
    16321 cacggcagaa taacggtagc cgtattcata ttccaagtga taacctgatg cgatggccgc
    16381 gccaaaacaa aaggctaaaa gcgcgcaaat gcccaatgta ttttttaatg tctgatccat
    16441 attttttatt cgggcggatt gtttcatacg atgccgtccg aatatcccat tatttacgag
    16501 ttaacaaagc ctgcccgacg atttcaagat cggaaaaacg gtgcttcacg ccctgtacat
    16561 cctgatagtt ttcgtgtcct ttgccggcaa tcaggatgat gtcgtttgcg gcggcctgct
    16621 caaccgcata acggatggcg gcggcgcggt cggcttcgac gcattcgggc gcgggcacgg
    16681 cgggcaggat gtcgttgatg atgtcgtgcg gattttccaa acgcgggttg tcgctggtta
    16741 cgacgacttt atccgcgccc tgtacggctg ccgcgcccat caatgggcgt ttgccgcaat
    16801 cgcggttgcc gccgcaaccg aatacgcacc ataaggccgc accctgcggt ttgatttcct
    16861 gcaaagtgga gagtgctttt tccaatgcgt cgggcgtgtg ggcgtaatcg acgacgacca
    16921 agggcttgcc gctgttcatg atgcagtcca tgcgccctga agcgggacgg atttttgcca
    16981 gcacatccaa taccttatca agcggataac cgttggcaca aagcaaggcg atgcaggcgg
    17041 cgaggttttg cgcgttgaac cgtccgagca ggcgggtgcg gcattttcct tcgccccacg
    17101 gggtttggaa tacggcttcc atgccgtctg aagaggcggt aaagtcggta atgcggatgt
    17161 cggcgtgttc gctgaaacca tagctgtaaa cggctaaatc gggacagtct tttttcagac
    17221 gacctgcgag ttccgcgccg tatccgtcat cggtattgat aacggcgtgt ttcaagccgt
    17281 gccagtaaaa caggcgcgac ttgatagcac cgtaggcttc catcgtgccg tggtagtcga
    17341 ggtggtctcg ggtgaggttg gtgaagattg cgctgcggaa cggcacgccg ttgactcgcg
    17401 actggtcaag gccgtggctg gaaacttcca tcgcggcggc tgttgcgcct tgttgacgga
    17461 aacggtagag cagggtttgg acatcgacgg gggcgggggt ggtgtgcgcg gtttcttcca
    17521 atgcacccca aaagccgttg ccgaccgtgc cgataatggc ggtttcttcg ccgaacaaat
    17581 cggcggcctg cgccagccat tgtgtgatgg aggttttgcc gttggttccg gttacgcccc
    17641 agactttgag accgtctgaa acgttgccgt aaacctgtgc cgccaatatg ccggcacggt
    17701 gtttcaaatc tttgatgcct tgattgggga ctttccattc gggattccac gcgaatctgc
    17761 cgtcgtcgtc ccaaaaaaca aaagccgcgc cgttggcaac ggcggcgggg atataactgc
    17821 gtccgtcggc atattcgccc ggacaggcaa cgaaaatatc gccttgtttg atttggcggc
    17881 tgtctgaatg caacaaacgc cctgccgcgt ttgcacacga cagggtcggg atgccggttt
    17941 cagccaaagg gcttaacttg ctgaacataa aacaatctcg ttgatactcg gattaagacg
    18001 gtgttttgac ggctgcggcg gtcagtggct tggtcgggga aatgcccaag atgttcaggc
    18061 tgccgcccat aatttttttg aagggcggcc ctgccactac gccgccgtag taaccgtttg
    18121 cagtcggctc gtcgatggta acggccacaa tcacgcgtgg atttttagcc ggagcaaaac
    18181 cgataaacgt accgacgtgt ttgttgtcca catagcggcc attgaccagt ttgcgcgccg
    18241 taccggtttt agcgccgaca tcgaaaccgt ccaccgcacc cgccgtaccg gtgccgcccg
    18301 gctcggttac ggaaaccatc agattgcgta cctcgcgcgc ggtcgattct ttgaatatgc
    18361 gtttgccttg cggcgcaacc gcctgcttct caaagctgag cggcagcaaa acgccgtcgt
    18421 gcgtcagtgc ggtataggcg cgcgccaatt gcagcaggct caattgcagg ccgtaaccga
    18481 aagacatcgt cgcctgttcg atgggccgcc acctgcgcca atttctcaac aaacctgcag
    18541 tttcccccgg aaagcccgag tgcatacgca caccgatgcc caattcatga tagaagtcat
    18601 acatttcttc ggcgccgaaa cgcgcagaca gtttgcttgt gccgacgttg gacgatttct
    18661 gcataatgcc gcgcacatcc aaagaggggt aaacatgggt atcgtcgcgc acgggagacg
    18721 gtccgatttt ataaggctgc gtattcagcc gttcgttcaa atcggttttg cccgcatcca
    18781 atgccttcgc aatcacgaac ggtttgattg ccgaaccagg ttcgatcata tcggttacgg
    18841 cacggttgcg ccgctgttcg ctgtctgccc ggccgggtct gttgggatcg taggcgggcg
    18901 tattggccaa ggcgaggatt tcccccgtgc gggcatccaa aaccaccacc gttccggctt
    18961 ttgcctgatg gtattcgacc gccttgttca actcttcata ggccaaggtc tgaatcctct
    19021 gatcgaggga aaggatgatg tctttgccgt tttgcggtgc tttattgcgc ggggagtcca
    19081 agctgtccac aatattgccc tgccggtccc gcaaaacaac ttccgcgccg tcttcgccat
    19141 acaggctgtc ttcaagcgaa agttccaaac cttcctgacc tttgccgtca atatcggtaa
    19201 atccgatgac gtgtgcaaac aggttgccca tcgggtaatg gcgttttaat tctttttcaa
    19261 atacaaagtt ttccaaaccc aaggctttga cctcttcggc aaccttggga tcgagctgcc
    19321 gcttgatcca aataaacgac ttgcctttct gttcgagttt gttcctcaaa acatcgaccg
    19381 gcacatcgac aagctcggac aggcgttcca attgggcggc agacggcatt tccttcatat
    19441 ctttaggcac ggcaaacagg gactccgtcg gcgcgctcaa cgccaaaacc gcaccgttcc
    19501 ggtccgaaac cgtaccgcgt gtagccggca atgcttgagt ccgcacaatc cggttgtcgc
    19561 cctgttcttt caaaaagtta tacgttaccg tctgcagata cagcccgcgg gcaatcagac
    19621 aggcaaacaa gaccgccatt gccatcagga cgaagctaat ccgtccgtta ctggtcatcg
    19681 gctttttgac ctgctcttct ttgggcagca tccggggctt atattcgctt ttaatcaaca
    19741 tttttacttc tcgttattat tatcctgatg caggaatccg attccggcac acaggctgct
    19801 tctatctttg atgttccacc ataaaggtat tgcccgaaac cggcggatgg aggttttgtt
    19861 tttctgccgc cgccctgatc gcttcgtgat tcgccaaacg cgcctgttgc accctcattt
    19921 gcgcataatc ctgctccaag gcgatttcct gttttttcgc cttgtccaaa gctgtgaagt
    19981 tgagcctgta ctggttttgc tgcatcacaa cggaaaaagc ggaaacgcac accgcaagca
    20041 gcagaaagaa attcgatttg ttcattgccg ttcagacgtt tttctctgtt attattccgg
    20101 tatcggaccg gcagtccgct ccgccacacg caaaactgcg ctcctcgccc tcgggttggc
    20161 ggcaatttcc gcttcacccg gctttaatgc cctgcccacg attttcaggg gcggctcggg
    20221 caaatccgct tctctgaccg ccgcccagct cggcaggggc tcgtgttgcg aatatttttt
    20281 gacaaactgc ttcacaatgc ggtcttccaa cgaatggaaa gcaatgaccg ccaaacgccc
    20341 gccctctttc agacggcaca tgacctgcgg caataccgcc cctacttctt caagctcgcg
    20401 gttaataaag atgcggattg cctggaaggt gcgcgtcgca ggatcctgcc cccgctcgcg
    20461 agtacggacg ttttgtgcca cgatctgcgc cagcttgcgg gttgtatcga ttggactttc
    20521 cgcccgttgc gcgacaatgg cgcgcacaat ctggcggcta aaccgctctt caccataatt
    20581 cttgattacc tcgtgcaaat cctgttccga cgcaaccgct atccactctg cggcagacat
    20641 accgcgcgtc gtatccatac gcatatccaa aggggcatcg aaacggaagc tgaaaccgcg
    20701 gctgccgtca tcgatttgcg gagacgaaat ccccaaatca aacagcgcac cgtccacctt
    20761 gccgataccc aaaccgtcca atgccgtctg aaacgaagca aaaccgccat gcacgacacc
    20821 gacccgtttg tccgaacgcg ccagctcttc tgccacagca atcgcctgcg ggtctttgtc
    20881 gaaaacaatc aaccgccccg catcgcccaa acgcgacaaa atcagccggg aatgccctcc
    20941 cctgccgaac gtaccgtcca catagacacc gtcttcgcgc acggcaagcg catccaccgc
    21001 ctcattcagc aagaccgtga tatgccggta actttctgct ccactcacaa ttgcaaatcc
    21061 gtctgactca actggaaggc aagttcgtca ggatcgtcat ccaaagcctg aaccatctca
    21121 gcctcccact gctcgcgacc ccaaagctcc aaacggttgg cacggccgac caaaacaact
    21181 tcacggtcga aatccaccct tttcctcagt ccggcaggaa ccagcaccct gccggcgctg
    21241 tcccattcca aaatttccgc gttatgcagc aaaagatttt gaaaccgccg caaaacaggg
    21301 ttatccgcca cttttaagtt taaaagttgc gccgcaacct tttcccactc cgcaacaggg
    21361 tacatcaaca gcttatgttt cgactcgagc gttgccacta cggcaggcgt atagaggcgc
    21421 gacagaatgt cgcggaattt ggcaggaaca gccaaccgcc ccttactgtc gatgcttaat
    21481 tcgtgtgcgc cgccgaacat gacatgcccc aagccgaaat caaaatcaca agggtaaaag
    21541 agacactttg ccccacaatt ccccaccaat cgacactata agaaatttta aacactcggt
    21601 caaatcaggg catgaaaact cattaacata tctgaaattt ttattctgtt taaaaacaat
    21661 aagataaaaa a
//
LOCUS       DAXGCP010000024        21485 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.024, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000024 DAXGCP010000000
VERSION     DAXGCP010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21485
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.024"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..450
                     /locus_tag="ACFJCW_000830"
     CDS             <1..450
                     /locus_tag="ACFJCW_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4151025.1"
                     /translation="PGGSCFGVRRKGRRGRGAAGKAVVFGIPKRNGRAYTVAADNAEP
                     ETLPPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRRNYINGIGNFW
                     NQAKRALRKYNGIDRKPFPPLLRECEFRLNFGTPSRQLKILRDRCGI"
     gene            584..2611
                     /locus_tag="ACFJCW_000831"
     CDS             584..2611
                     /locus_tag="ACFJCW_000831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HFC4151026.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFSWFYVLTFSIFLGFLLILSVSGLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITVGAPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGITTTLGFGASQLGA
                     GLQEMGWIAENSFGVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLGLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSLKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVRIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            complement(2700..4253)
                     /locus_tag="ACFJCW_000832"
     CDS             complement(2700..4253)
                     /locus_tag="ACFJCW_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HFC4151027.1"
                     /translation="MNRTYANFYEMLAAACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAVSAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASAGLSKELAGLKAQTPVEKIIWTDKSRPAGETAEGDAFFENVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQALLKRATVFLGVPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGEDEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            4304..4432
                     /locus_tag="ACFJCW_000833"
     CDS             4304..4432
                     /locus_tag="ACFJCW_000833"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151028.1"
                     /translation="MPSENGRRQFIIFAFRRHIKRRLCAACRRFAPVLPMSDLNAV"
     gene            complement(4504..5697)
                     /locus_tag="ACFJCW_000834"
     CDS             complement(4504..5697)
                     /locus_tag="ACFJCW_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HFC4151029.1"
                     /translation="MNPKHFIAFSALFAATQAEALPVASVSPDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKLRSVAQGSGETFRILQIGDSHTAGDFFTDALRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHSGNWQSFTSRNNTGDFPLGGILAQTGSGGGMTLTASDG
                     KTGKQRVSLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTGAALPLAIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTQWSKWRADRMNDLAQTGADLVILSYGTNEAFNNNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVLLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAQGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(5694..6677)
                     /gene="patB"
                     /locus_tag="ACFJCW_000835"
     CDS             complement(5694..6677)
                     /gene="patB"
                     /locus_tag="ACFJCW_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HFC4151030.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYALSDGIKTFLSGETPPTAQDGGSADMPPEAAASEAAPPAGGT
                     EWKQGTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESANLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKVKLDGQMRYLDKLLSEHLKGKIILIPTAQTLSGGKGR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAEKIMEKIVFEPSTQPSSTQP"
     gene            complement(6688..8124)
                     /locus_tag="ACFJCW_000836"
     CDS             complement(6688..8124)
                     /locus_tag="ACFJCW_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HFC4151031.1"
                     /translation="MPLLSVEFALFFIVFLPIYWGFAKYPSVQNLLLLAAGMGWLYHI
                     SPVFAAIIVLYSSCVYLLGELLRSDRESTRRFWLGCGIAASITVLGFFKYFDFFRPLI
                     AQYAGKGGAIDILMPLGLSYYTFQSVAYLVYCFRAPHAARFGWHELLLHLSFFPTVTS
                     GPIIRAAAFKSTDGEQAGALAQIRTRRPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLAGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RAANIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALALLNTGDRYFGRDALCRLKYLAPLSWFVTFHFVCLSFVVFNTANPD
                     DAGAVFSALFANAGGWNAPQRADMLLLASFASLMLLYPYLQRAFDGTVKGLEKIPMWL
                     WFIQISIILLLIIVLAPSGIPGFIYANF"
     gene            complement(8253..9418)
                     /locus_tag="ACFJCW_000837"
                     /pseudo
     CDS             complement(8253..9418)
                     /locus_tag="ACFJCW_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
     gene            9859..10071
                     /locus_tag="ACFJCW_000838"
     CDS             9859..10071
                     /locus_tag="ACFJCW_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HFC4151032.1"
                     /translation="METLLLDIGGMSCGGCVKSVTRILESVKGVASVEVSLENKSATV
                     GYDPAQTAAEALIEAVEDGGYDAALK"
     gene            10219..11797
                     /locus_tag="ACFJCW_000839"
                     /pseudo
     CDS             10219..11797
                     /locus_tag="ACFJCW_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
     gene            11879..12976
                     /locus_tag="ACFJCW_000840"
     CDS             11879..12976
                     /locus_tag="ACFJCW_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HFC4151033.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYVLGFGSGKVQAALGQNLLQAGLPLMQ
                     VWQENLASEGITLFANPLSPDTPARALSDGSHTRQRMAMDVFAANAIRAVRMQGPRVG
                     VVAAAKAGGQILFGFNATDGAFEVVPQVFCWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQENIPSYAEALKREGRNPFFSA"
     gene            13090..14205
                     /locus_tag="ACFJCW_000841"
     CDS             13090..14205
                     /locus_tag="ACFJCW_000841"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HFC4151034.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTAGNDGGIGIAAGLGYQFYDEDGNALP
                     ACGQSLLNPASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVPPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIVGKGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSFAEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            14273..14785
                     /locus_tag="ACFJCW_000842"
     CDS             14273..14785
                     /locus_tag="ACFJCW_000842"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HFC4151035.1"
                     /translation="MPSERVSASDGIALEQGWDMKKPKILFVCLGNICRSPMAEYILR
                     RRAAEAGIPLETDSAGTSGWHDGEDMHRETAKILKKYGIDASGFTSRKIRQSDATAFD
                     YIIAMDGKNLSELEKTFGRRPEKIFKLTDLIPESGYDHVPDPWYMGDFEETYRLADAG
                     CRALLEKISK"
     gene            14862..15338
                     /locus_tag="ACFJCW_000843"
     CDS             14862..15338
                     /locus_tag="ACFJCW_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HFC4151036.1"
                     /translation="MKTNFKQKIIEQARREDLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWADQGVLHKVAAVNGYILCSHAQHECNDHCHDHEEA
                     EAHHSAFILVCTECGAADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            15326..16252
                     /locus_tag="ACFJCW_000844"
     CDS             15326..16252
                     /locus_tag="ACFJCW_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HFC4151037.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVDPRQFINPDYAQQALYKDQIGICDVLAAGKTD
                     LCTPEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIQWLDIPVVEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            16317..16871
                     /locus_tag="ACFJCW_000845"
     CDS             16317..16871
                     /locus_tag="ACFJCW_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HFC4151038.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATRVLMETDMGNIRLVLDESKA
                     SKTVANFVRYARKGFYDNTIFHRVIGGFVIQGGGLTEDLVQKATDKAVANESGNGLKN
                     TVGTIAMARTADPDSAAAQFFINLADNGSLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGLYQNVPIQPVKIRRVVVE"
     gene            complement(17005..17964)
                     /gene="ttcA"
                     /locus_tag="ACFJCW_000846"
     CDS             complement(17005..17964)
                     /gene="ttcA"
                     /locus_tag="ACFJCW_000846"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HFC4151039.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDTINDFNMIEPGDKIMVCLSG
                     GKDSYALLDILRRLQASAPIDFELVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATMFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFAGLERGQNLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGP"
     gene            complement(18056..18919)
                     /locus_tag="ACFJCW_000847"
     CDS             complement(18056..18919)
                     /locus_tag="ACFJCW_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HFC4151040.1"
                     /translation="MKTLLPFFGVARVSGEDRQTFLHGQLSNDINNLQAGQACYATYN
                     TPKGRVIANMIVVNRGDDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     AASAEPLAAQEPSLAFTSECVSDGICSVILHHRGILHIAPETALPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAAEAGILLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELTVPNGGIFKA
                     VHLFFKTKNAE"
     gene            complement(18954..19316)
                     /locus_tag="ACFJCW_000848"
     CDS             complement(18954..19316)
                     /locus_tag="ACFJCW_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC4151041.1"
                     /translation="MDIRYFGTTPRYSEAVCAGGLIFLSGMVPENGETAAEQTADVLA
                     QTDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKRDAATA"
     gene            19391..19870
                     /gene="ybaK"
                     /locus_tag="ACFJCW_000849"
     CDS             19391..19870
                     /gene="ybaK"
                     /locus_tag="ACFJCW_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HFC4151042.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGPIVLMHGDKQISTRNLARHLGAKHIEPAAPAQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPDDLNILNPKTIQAAV"
     gene            19892..20584
                     /locus_tag="ACFJCW_000850"
     CDS             19892..20584
                     /locus_tag="ACFJCW_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HFC4151043.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNLQAEE
                     KFKEIQRAYDTLSDLSKRTQYDASFRRHEERGRQEEAFRREQARREQFYGEQMRREQA
                     FRREFERQASRSRHAYEPSGSGSGRNYILAAYILFGLGAIMQFMPIVGVILAYMKRNS
                     LDSIVYAAHTEYLIKTFWRTFWLYLLGALTARFGIGVLIIIATTVWYFYRIIAGFIRF
                     NDGRAVAPEKWI"
     gene            20588..21463
                     /locus_tag="ACFJCW_000851"
     CDS             20588..21463
                     /locus_tag="ACFJCW_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HFC4151044.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     SVLKPDVGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVESAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKSDSGKKSGSAWRQALLLLGVWAGYGI
                     IDILFKQIAKSGTAFAGNLLVAFALAGVLMFACLFAKSVRWRVESVVGGILLGGLNFM
                     NIVTYITAHQMMKDSPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLSLCSI
                     ACLFYWTEVKALFGI"
BASE COUNT         4949 a         5410 c         6117 g         5009 t
ORIGIN      
        1 ccgggcggaa gctgtttcgg cgtacggcgt aaaggcagac gcggtcgcgg cgcggcagga
       61 aaagcggttg tcttcggcat tccgaaacgc aacgggcggg cctataccgt tgccgcggac
      121 aatgccgagc ctgaaacgtt gccccctgcc gtcaaaaaga aaatcatgcc ggacggtatt
      181 gtttatgccg atagcccggg cagccgcggc aagtcggacg cgggcggttt tacccgttgc
      241 cgcatcaacc gttccaagga atttgcagac cgtcggaact acattaacgg cattgggaac
      301 ttttggaatc aggcaaaacg cgccttgcga aaatacaacg gaatcgatcg taaacctttc
      361 ccgccgttgt tgagggaatg cgaatttcga cttaacttcg gcacaccgtc ccggcagcta
      421 aaaatcctgc gggatcggtg tggaatttag ggataatcta gtacagcccc atttcggccg
      481 gtttgtgcat ttcgtcatcc ggaagccggt attttgccgg caggttttga ctactttgcc
      541 cgatgaccgg gtttgtctgt ttttaacaaa ggagtgagaa ggtttgtccc tgtctgaatt
      601 tatagaacgc cgaacgtcat ttaatccgat ggttattttg acgactttgt tttttgtgtg
      661 tgttttggtg gtattggttt taaccgtgcc ggatcaggtg cagatgtggc tcgaccgggc
      721 aaaagaagtc atttttaccg agttcagctg gttttatgtt ttaacgtttt ccatttttct
      781 gggttttctg ctgatactct cggtcagcgg tttgggaaac atcaggctag gacgggatga
      841 agatgtgccg gaattcggct tcctgtcgtg gctggcgatg ctgtttgcgg ccgggatggg
      901 cgtgggcctg atgtttttcg gcgtggcaga gccgttgatg cattattttt cggacattac
      961 ggtcggcgcg ccggaacaca ggcagcagca ggcattgctg cacacggtgt tccattgggg
     1021 cgttcacgcc tggtcggtgt acggtacgat tgcattggct ttggcttatt tcggtttccg
     1081 ctacaaactg ccgcttgccc tgcgttcttg tttttacccc ctgttgaaag aaaaaatttc
     1141 cggaaggttc ggcgatgcca ttgatattat ggcgttgctt gctacttttt tcggcatcac
     1201 caccacattg gggttcgggg cttcgcaact gggcgccgga ttgcaggaaa tgggctggat
     1261 tgccgaaaac agcttcggcg tgcaggtctt gattatcgcc gccgtaatgt ccctcgccgt
     1321 cgtttcggca atatccggcg tggggaaggg cgtgaaggtg ttgagcgagt tgaacctggg
     1381 ccttgcgttt ttgctgctgt tttttgtttt ggcggcgggc cccactgttt acctgttgtc
     1441 ggcattcggc gacaacatag ggaactacct cggaaatctg gtgcgcctca gtttgaaaac
     1501 ttatgcgtac gaacgggaac acaagccgtg gtttgaatct tggacggtgc tttattgggc
     1561 gtggtggtgt tcttgggcgc cgtttgtggg tttgtttatc gcgcgcattt caaaggggcg
     1621 caccatccgc gagtttgtct tcggggtttt gctcatcccc ggcctgttcg gcgttttgtg
     1681 gtttaccgtc ttcggcaata cggcgatttg gctgaatgac ggggttgcgg ggggaatgct
     1741 cgaaaagatg acctcctctc cggaaacgct gctttttaaa ttctttaatt acctccccct
     1801 gcccgaactg acgagcatcg tcagcctgct ggtcatttcc ctgttttttg taacttctgc
     1861 cgactccggg atttatgtcc tgaacaatat tacctctcgg gacaaaggct tgagcgcgcc
     1921 acggtggcag gcggttatgt ggggcgtgct gatgtctgcc gttgccgttt tgctgatgcg
     1981 ctcgggcgga ctcggcaacc tgcagtctat gaccctgatt gtttccctgc cgtttgccct
     2041 gctgatgctg ataatgtgtt tcagcctgtg gaaaggcttg agtgcggata agaaatattt
     2101 tgagaccagg gtcaacccta ccagtgtatt ttggacgggc ggcaagtgga aagaacggct
     2161 ggtgcggata atgagccaga cgcaggagca ggatatttta aaattcctca aacataccgc
     2221 atcgcccgct atgcacgagt tgcaacggga gctttcggaa gaatacggct tgagcgtccg
     2281 ggtcgataag atgtttcatc aggacgagcc cgcaatcgag ttcgtcattc ggaaagagac
     2341 gatgcgcgat tttatgtacg ggattaagtc tgtcgggcag gatgtatccg accagttgat
     2401 taacgacggc aagctgccgc atatccggca ccagacaact tacaaaccct acgcttattt
     2461 tttcgacggg cgcgtcgggt acgatgtgca gtatatgaac aaggacgagc tgattgccga
     2521 cattttgaaa aactacgaac gttatttgat gttgttggat gatgtcggtc aggaactgat
     2581 ggcgcacgag caggtggaat tggcagagta agcgccttcc ctccggcgtt tgccaaaaaa
     2641 tgcggtgaat cagattcacc gcattttttt gccggacggg gcttcggacg gcacggcgtt
     2701 catttgtttc cgtcaaactg ctccttcagc acccgtttca atactttgcc cgtagcgttg
     2761 cgcggcagcc cgtctttaaa gtggatctgt ttggggattt tgaaatttgc cagcacggta
     2821 cgcaggtggc ggcggatttc gtcctcgccc aaatccatac cttccttcaa ttggacgaag
     2881 gcgacgattt cctcgtcggc ataacggtct ttcacgccga tgacggcggc ggcttcgacg
     2941 gcatcgagtt tgtagatttc ttcttcaatc tcgcgcggat agacattttg acctttggaa
     3001 ataatcaaat cttttttgcg gtcgacgata aagataaagc cgtcctcgtc tatggtaacg
     3061 aaatcgcccg ttttcaacca gccgttgacg atggtttcat cggtggcggc aggcatattg
     3121 aggtagcccc gcatcaccga accgcccctg acgatcagtt cgcccacttc gccgcgcggc
     3181 acttcgacca attcttcatc gacggctttg gcttccaaac cgggcagggg gatgccgacg
     3241 ctgcgggctt tttgccgttc gggcgtattg acggcgacga cgggcgaggc ttcgctcagt
     3301 ccgtagcctt ccagcaattt ggcgcggggg aacttggctt taaaatcgag gatggtttgt
     3361 tccgccaaag gcgcgccgcc gctgataaac aggcggatgc ggttgaacca tctgaaatac
     3421 caagggattt tcgccttgct catcgcggtg taaatcgcgg gtacgcccaa aaacacggtt
     3481 gcgcgtttga gcagggcctg tttcaaaacg ttggaaaagg ggaaaacgga tttgaccaaa
     3541 ataatcgaac acgccatata aatcggcagc agtaccatag ccgtcagcgt gaagctgtgg
     3601 aacatcggca ggaaaacgat aaagcggtcg cgtttggaaa ttttaaagat gcgttcgatg
     3661 ccgttcaggt tggcgaacag gttggcgtaa ctgattagcg cgcctttggg atgccccgtc
     3721 gtgccggagg tgtagatgat gtgtgccaaa tcatttatcc ggggttggcg gcccaagtcg
     3781 ggtttttcgg ggaagcggcg cacgttttca aaaaaggcat cgccttccgc cgtttcgccg
     3841 gccggccggc ttttgtccgt ccaaatgatt ttttcgacgg gcgtttgcgc cttcaggccc
     3901 gccaattctt ttgacaggcc ggccgaggcg aacaggaagc gcgccttgca gtcattcagg
     3961 atatacgcgt attcgctgtt tttcaaaaat gtgttcatcg gtacggcgac cgcgccgatg
     4021 gcggagacgg cgaaataggc ggtaataaat tctgtggaat tggaaaccgc cagcgcgacc
     4081 gtgtcgccga acttcacgcc gatattttgc agatacgccg cgacggcttc ggcttcctgc
     4141 ttgagcgcgc ggtaggcggt tttttccttg ccgtcgaaca ctgccgtgcc gttgccgttt
     4201 ttgcggcagg cggcggcgag catttcgtag aaattggcat aagtccggtt catgaaactt
     4261 cctttatggt tgcggacggc gaacgccctc atttgaaaac aatatgccgt ctgaaaacgg
     4321 aaggcggcag tttatcatct ttgccttcag acggcatatc aaacgccgcc tttgcgccgc
     4381 atgccggagg ttcgcccccg tccttcctat gtctgacctg aatgccgtct gaatcaatat
     4441 gaagatatac gtttcagacg gcatccccct gttgtggaaa taccgtccgc cccccctgtc
     4501 cgattattgc ctgattgcgg cggcgcggac gagttcttcg aggctgtcgg caagcatttc
     4561 cgccgcgcgc cggtagcctt gggcggagaa gtgtacgccg tctttggcgg cccatccttg
     4621 gttgagccag tttttcatgc tgcatatgcc gcccattgcg ttttgccaag accaaaacat
     4681 cgtctgcccc tgacgggcga cgcgccgctg catctgttgg acttcggtca ggaggacggg
     4741 gcgcgtgccg catacgccga gcgtgttttt cagggattcg ggcgcgccga tgatgaggat
     4801 gccggcggcg ggcaggctgt cgcggatttg gcggacggta tccagccatt tttgttcggt
     4861 atcggcaatg tcgatgttgt tgttgaaggc ttcgttggtg ccgtaggaaa ggataaccaa
     4921 atcggcgccg gtttgggcaa ggtcgttcat acggtcggca cgccatttcg accactgggt
     4981 caattgtgcg ccgttgatgc ccatcgcgga aacggtaatg ccgccggcgg gattttcgat
     5041 gttgatgaag ccgatgtccc acggcatttc ggtctgtatg gccaggggca gtgccgcgcc
     5101 cgtatccagt acctgccagc cgccgccgtt ggcggagacg gtgttgccgt tgacggtcag
     5161 ggtttgttcg gcgagcagcg gtttggcaaa cagggaaacg cgctgtttgc cggttttgcc
     5221 gtcagacgcg gtcagggtca tgccgccgcc gctgccggtt tgggcgagga tgccgccgag
     5281 cgggaaatct ccggtattgt tcctgctggt gaagctttgc cagttgccgc tgtgacggac
     5341 ggccgccatg cgctgccctt tgacattggc ggggtaaacc cagcctatgc cgccgtcgcc
     5401 ccatgttttt tgcaggcgtt tgcgcagggc gtcggtaaag aagtcgccgg cggtatgcga
     5461 gtcgccgatt tgcaggatgc ggaaggtctc gccgctgcct tgtgcgacgg atcggagttt
     5521 tttcatccaa ggcgaggcgg cggcgttgcc gtagtcggtc agcagcccgt ttgtatcggt
     5581 gtagggggcg gacggggaaa cggtaacggt gtcggggctg acggaggcga cgggcagggc
     5641 ttctgcctgc gtggcggcga acagggcgga aaatgcgatg aagtgtttgg ggttcatggc
     5701 tgtgtacttg atggttgcgt actcggttca aaaacgattt tttccattat tttttccgcc
     5761 agcagttttt gtccttcggc ggtaaagtgt atgccgtcct tactgcggta gcggacgggt
     5821 ttgccgttga cgttgacgga atcggtgtag cggcctttcc cgccgctcag tgtttgcgcg
     5881 gtgggaatca ggatgatttt gcctttcaag tgttccgaaa gcagtttgtc gaggtagcgc
     5941 atctgaccgt cgagcttgac ttttttcatg taggggatgc cgagccagac gacttggacg
     6001 cggtgcgtgt gtgcggcttc aaggatgcgg tcgacgcgtt tcaggtattc ttgcgcccat
     6061 tcgtcggaag cgaatttgag gtagcgtttg ccgacgggga aatcccacgg gtcgttcggg
     6121 ccgaggaaga cggcgagtac gctgatttcg ggatgttttt tcaaggtttc ttcaatcgtt
     6181 ttcggccagt cgaagaatga gggataggaa agccccgtgc tttgtttgct gaggttggcg
     6241 gattcgatgc cgtattgctg tttcaggctt ttttgcacga agggcgcaac gccctgcatc
     6301 agcgaatctc cggcgaaaaa gactttgtcg ccgctgcgga cggcggcggc ttcggtgcct
     6361 tgtttccatt ctgttccgcc ggccggcggg gcggcttcgg atgcggcggc ttcaggcggc
     6421 atatctgccg aaccgccgtc ttgagccgtc ggcggcgttt cgccggacag gaaggttttg
     6481 atgccgtctg aaagggcgta ggcgttttct tgcaacgccg ctccgctccg ccaccatccg
     6541 taggcggcaa gcggttcgag cgggctgttg cggtggtagg tctgctgcca gtaggcgttg
     6601 atggggtttt ggctgaacca cacggcaatc agggcagaca tcagtatgga ggcgaaaagg
     6661 gaaagaaagt ttttcatgtc caaaccctta aaaattggca taaataaagc cgggtatccc
     6721 cgaaggggcg aggacgataa tcagcagcag gatgatggaa atctggataa accacagcca
     6781 catcgggatt ttttccaaac ctttgaccgt gccgtcgaaa gcgcgttgca ggtaagggta
     6841 gagcagcatc aaggatgcaa acgaggcaag cagcagcata tccgcccgtt gcggcgcgtt
     6901 ccagccgccg gcattggcaa agagggcact gaaaactgcg cctgcatcgt cggggtttgc
     6961 ggtattgaag acgacaaagc taaggcagac gaaatggaag gtaacaaacc acgagagcgg
     7021 cgcaaggtat ttcagacggc atagcgcgtc gcgtccgaaa taccggtcgc ccgtgttgag
     7081 cagcgccagt gccgtgccgt gcagcgcgcc ccaaatgagg aagttccagc cgtagccgtg
     7141 ccagatgcct gagagtacca ttgccgccat caggttgagc tgtgtccgca aaaagccttt
     7201 tttgctgccg cccaagggga tgtagatgta gtcgcgtatc caggtggaaa ggctgatgtg
     7261 ccatttgtcc caaaatgcgc ggatattcgc ggcacgaagc ggtgcggaga agtttttggg
     7321 cagccggaag cccagcagca tcgccatacc gataaccaaa tcggaatatc cggaaaagtc
     7381 taaaaagagt tggaaggtat agccgtacac gcctgccaac acgccccagc cgtcgaattg
     7441 ggcgggattt tcaaatacgg gcgacaccca gttttccgcc agcatccccg ccagccacca
     7501 ttttttggca atgcccagta aaatcaggga aacggcgagg gcggggcgga cgggcgaacg
     7561 cggtcggcgg gtgcggattt gcgccagtgc acccgcctgt tcgccgtccg tgcttttgaa
     7621 tgcggcggcg cggataatcg ggccggaggt aacggtgggg aaaaaactca ggtgcagcag
     7681 cagctcgtgc cacccaaaac gcgcggcgtg cggggcgcgg aagcagtaaa ccagataggc
     7741 gacagactgg aaggtataat aggaaagccc cagcggcatc aggatgtcga ttgcgccgcc
     7801 ttttccggca tattgtgcaa tcagcggacg gaaaaaatcg aaatatttga aaaagcccaa
     7861 aacggtaatc gaggcggcaa tgccgcaccc cagccaaaag cggcgcgtac tttcgcgatc
     7921 ggaacggagc agttcgccca aaaggtacac gcaggaggaa taaaggacga tgattgccgc
     7981 aaatacgggg ctaatatggt agagccagcc cataccggca gccaaaagca gcaggttttg
     8041 gacggacggg tatttcgcaa agccccagta aatcggcagg aagacgataa aaaacagtgc
     8101 gaactcgaca gacagcagcg gcataaacca tccttgggac aaaaaatagg cgttaaaaca
     8161 cggcaaagcc cgttatttta agcaggggcg gatattcctt caatcaaaat gccgtctgaa
     8221 gggcgggagg ggcttcagac ggcatcgctc ggtcaggttc ggatatggtg gttcaaattc
     8281 aggcagaccc gcaaacctgc cgccgccgtc agcatacccg caacgccgat gcaggaaatg
     8341 cccgagtatt gcgtaaccta atgtcccagc agtgcgccgc cgcctatacc gacgttgtaa
     8401 agccccgaat aaatcgagtt ggcaaggtct gcggcatcgg aggcgaaatc caaaactttg
     8461 gcaaccatcc ccaagctgac gaccacaatc gccgtccccc atacgaacac caacgcgtaa
     8521 atggcggcag gaaaatgcgc caaaggcagc aaaagccccg aagagagggc gataagcgac
     8581 accgcgcccg ccaaaaatgc gcgcggatgt ttggcaaacc atttgccgaa caggtaagac
     8641 gcggcaaaac ccgccaggcc gtacagcccc ggaaccaccg taacctgccg cgcggagaaa
     8701 ccgccgattt ggatgacgaa gggctcgatg tagctgtatg cggtaaagtg cgccgtaatc
     8761 accggcaccg ttaccgcata cagcagcatc agttttttcc gtttcaaaag caggggcagg
     8821 ctgcttaaag aaccggtatt cacgctcggc aggcgcggca ggcttttggc aagcactgcc
     8881 attaccgccg ccgaacacag gccgatcagc agaaaactcg cctgccagcc caaatattgt
     8941 ccgaccatac gcccgagcgg aatccccgcc accatcgcca tcaccgtccc cgtgctgagc
     9001 agccccaatg cctgattccc ttttccgaca ggggcgatgc gtaccgccag cgaagccgta
     9061 atggaccaga acaccgcgtg cgtcagcaca atccccacgc ggcttgcgag taggatttca
     9121 aaacgccacg aggcaaacga caggatgtgg ctgacagtaa tacagcgcaa acaggaccag
     9181 cagcaggccg cgccgttcca taattgcgcg tcagcagcat cagcggcagc ggcagcgaag
     9241 tcagcgcgac aatccacgca taaaccgtaa tcatcacacc cgtttcggtc gccgccatgc
     9301 cgaagcttcg tccgatgtcg ctcaaaagcg cgatggggat gtattcggcc gtgttgaaaa
     9361 taaatgcgcc gattgccaag gcaacgatgc tcaaccaagg tttgtgcgaa gcgttcatct
     9421 caattcctta tatgtcgcac cccgccaaaa gggggcgcat tatggtgaat taacaaaaac
     9481 cggtacggcg ttgccccgcc ttagctcaaa gggaacgatt ccctaaggtg ctgaagcacc
     9541 aggcgaaccg gttccgtacc atttgtactg cctgcggccc gccgccttgt cctgattttt
     9601 gttaattcac tatacttttc ttgtctgccg gacggcaaaa tccaaatcag ggggaagcag
     9661 ccgcctcccg ttcggagaaa cactcgggac gctgctttga aaatcgttcc atatgttgaa
     9721 acattgccgc ctcccgattg ggcaaggttg ccattatgtc gcaagcatcc gtgccgcacc
     9781 gtttccgcgt ttgcccaagt tcacgctccg acttacaata acgcccatca gattgcagta
     9841 ccaacgaaag gaaaaatcgt ggaaaccctc ctcctcgaca tcggcggcat gagctgcggc
     9901 ggctgcgtca aaagcgttac ccggatatta gaaagcgtaa aaggcgtggc aagcgtcgaa
     9961 gtcagccttg aaaacaaaag tgcgaccgtc ggatacgacc ccgcgcaaac cgcagcggaa
    10021 gcactaatcg aagccgtaga agacggcggc tatgatgcgg cgttgaaata aagcggcaaa
    10081 aatgccgtct gaagcctttg cgtttccccg atgccgtctg aagcacgctc cgcgccttca
    10141 gatggcattt gatttagttg aacgggcagg atgaattggt taaacttgcg ggcaatagtg
    10201 ccttcagaca aacaaaatat gccgaacaaa aagaaaaaag ccgcctttgc gcgctgcaac
    10261 ggagaacggt gtgccgggcg tgtccgacat caaaaattca tatgatgatt tgatgtacga
    10321 atccaaagca ttttcccaaa ccgccatcaa cgccttggag gcatgcgccc gcatgatggg
    10381 tttgaagcct acggcagccg caaaagccaa ggtcttggag ctgggctgtt cgatgggcag
    10441 aaacatcatc acgcaggcac tttattaccc ggatgcggaa tttgtcggta tcgacttgtc
    10501 cggcaggcag gttgcgcagg gcaacgccat cattgaaaaa atgggcttgg aaaatgtgcg
    10561 tctggaagaa aaagatattt tgaccgtcga tgaatcattc gggaagttcg actatatcat
    10621 cgtccacggc atttggtcgc gggtgcccga cgcagttaaa gacaaaatct tttcgatttg
    10681 ccggaacaac ctgaccgaat acggcattgc ctatatttca tacaatgttt accccggttg
    10741 gaagcggcag gagcagttgc gcgatattat gcagtttgcc ggcagggatg cgcttggaga
    10801 acccttggaa gcaaggacgc ggaaaggctt ggatgcgatc aaggcgctgg cggaaatttt
    10861 ggaaaacgac aagggcttgg gcggcggcaa acttccggcg attcaaaaaa tattgaatca
    10921 caatacttat tatgtcgcac acgaatatat ggaaatattc aacgacccga tttacgttaa
    10981 cggtttcatt gaatgggcaa accgccaccg gctggcgtat atcggggata ccgatttgca
    11041 tgtgtctttt gtttcttgga tggcggagca tacgcgggag cggattctgg cattggcagg
    11101 gggtgattat attgccaaag aattttacag cgatatttta tccgaccgcc aattccaccg
    11161 ttcgctttta tgccgtgagg aagtcgggga tactgtcagg cgtgatgagt cggttgccgt
    11221 cgaagtgata gaaagtttga atttccgccc ggcaagaggg gaaacaatca actttgatga
    11281 aaacgatacc ctgctttcgg gcatacgcga tgtgatgaaa accggagagg cgtttaaaac
    11341 ggaagatgtt gcggaaaatc ttgcccgccg atttcccggt ctggaatttg accgcatgaa
    11401 aatcaattcc cagcttttat tgcaaaccat tctcgggcgt ttttctgttt catcagacaa
    11461 tgcgggcaaa ccattttttg aagaccataa aacctatgtg ccggcgcgct ttacaaacta
    11521 tgccgccgcc tttgtggaac acggtgcggg agcgtttgtc cggcctgcca accgttacaa
    11581 cgaaagcacg ccctcattcg gatacgggca tttgtacatt atgcggcaat tgtcgcggcc
    11641 gacgagcaaa caggcattga ttgaaacggt tgccgaaaac ttgaacatcg tcagcgccac
    11701 gcccgacggt ttgacattcc atccgcctgc cgaagtgtat gtggaagaaa tattggcaga
    11761 cttggcagac aggcattttc tcgtttcggc ggattgacgg gcaagtcccg acggcaatcc
    11821 gtccgatata ttttcagaca ggaaagacac acactgcgaa aaacggtaca cgacacatat
    11881 gaaccagaca tttaccttgc ccgatacgcg cccgtatccc caaaatccga ttaaaaacca
    11941 cctgctgctc aatgcctacc agttggcgca caattcgtca caggcttcgc gcaaactctc
    12001 gtccgggcag cttcaaaccg aaatcagggg gatgcttgag caaaaccact atatcaacct
    12061 ttccctcgcg ctgacgatgt cgcccgatgc cggaacttat gccgcgctgc tttccagtgt
    12121 gaacgcggta ctcgattgcg agaaagaagg cgaagtgcag tggttcgccc tgccggtcgt
    12181 gctggtgtca ggctgcaaga aagaacgggc aatcgagatg aagctgccga cggaggcatt
    12241 gtttgcctgc ctgcaaaact atccgcacct gcgcgcgttg acgcaagaga cacaatggct
    12301 gccttatctt gtgcattctt ccgatttgag tgcggtcgcg ccggatgagt ggtggcgtgc
    12361 caaacaaaat accgaagcgg cggcgcaaca cttacgccgt ttcgccccgc gccctttgct
    12421 gttgcccgaa gggcagtccg tccacgtcgt ttacgtgctg ggtttcggca gcggcaaagt
    12481 tcaggcggca ttggggcaga accttcttca ggcaggcttg cccttaatgc aggtatggca
    12541 ggaaaatctt gcatcggaag gcattacgct gtttgccaat ccgctttccc ccgatacccc
    12601 ggcgcgcgcg ctttcagacg gcagccacac gcgccaacgt atggcgatgg atgtttttgc
    12661 ggcaaacgcg atacgcgccg tccggatgca gggtccgcgc gtcggcgtgg tcgctgcggc
    12721 aaaggcgggc ggacagattc tattcggatt taatgcgacc gacggcgcgt ttgaagtcgt
    12781 gccgcaggtg ttttgctggc agctttcctt taccgataac attgccgtca tccagcagaa
    12841 tttcctcgac ctgatggcag aatgccgtgt agaacacgtt tacctgctgc acaatccctt
    12901 gggcgaacag gaaaacatcc cgagctatgc ggaagcgttg aaacgggaag ggcgcaatcc
    12961 gtttttcagc gcatagtgat ttgtagtagt gataggcttt ctcatttcta taataaatca
    13021 aaataaagag cacaacactt tttcattctg tgttgtgcct tgagtgaaac gaaaggatga
    13081 attataaata tgaagattgt aattgcaccg gattcgttta aggaaagctt gacagctcaa
    13141 caggtagctg aagcaataaa aagaggcttc caacaatcga tagcagatgt ggaatgtctc
    13201 ctctgtcctg tcggtgatgg gggagaaggc actgtagatg ctatccgaca ttctcttgac
    13261 ctagaagaaa aatgtctcca agtgacagga ccttttggac aaaaagaagt catgcgctat
    13321 tttcaaaaag aacaactagc cctattcgaa gttgctgatt tggttggtct tggaaaaatc
    13381 ccgctagaga aacgaaatcc attacaaatc caaactcgtg gtattggaga attgattcgc
    13441 cacctcatta gtcaagaaat taaagaaatc tatattggcg ttggcggtac ggccggtaat
    13501 gatggaggta ttgggattgc tgctggttta ggttatcaat tttatgatga ggatggaaat
    13561 gccttacccg cttgcggtca atccttacta aacccagctt ctgtttcaac agaaaatcgc
    13621 tatgaaattc ctgaagatgt tcacattcgt attttagcag atgttgtgag tcccttatgt
    13681 ggacaccaag gtgcgaccta tacgtttggc aagcaaaaag ggctggattc tactatgttt
    13741 gaggccgtag atcaggcaat acaagatttt tatgaaaaag tcccccctgc aacattaaaa
    13801 cttaaaggag caggagctgg tggaggcatc gctggtggtt tgtgtgcctt tgctcaggca
    13861 agtatcgtat ctggaattga cacctgcctg gacttgattg actttgataa gaaagtgtca
    13921 gatgttgact tggttatcgt tggtaaagga agactagatc gtcaaagttt agcagggaaa
    13981 gcgcctattg gtgtagcaaa aagaacccct gtcggagttc ctgttgtcgc tatttgcggc
    14041 agtttcgctg aagatttgcc ttccctacca tttgaaaata tccaagctgc cttttctatt
    14101 ttggagaaaa gtgaaccttt agaagatagt ttgaaaaatg ccagtcttta tttggagcat
    14161 acggcttcta atattggaca tttattaaat atgcctaaga tttagccaag ccatttcttc
    14221 cagatggatg ttttggcagg ttcttcctta tgcggttacg attaaccggc cgatgccgtc
    14281 tgaaagggtt tccgcttcag acggcatcgc gttggaacag ggatgggata tgaaaaaacc
    14341 gaaaatcctt tttgtctgcc tcggcaacat ctgccgttcg ccgatggcgg aatacatttt
    14401 gcgccgccgt gccgccgaag cgggcattcc cctcgaaacg gacagcgcag ggacatcggg
    14461 ctggcacgac ggcgaggata tgcaccgtga aacggcaaag atattgaaaa aatacggcat
    14521 tgacgcttca ggctttacca gccgcaaaat ccgccaaagc gatgcgacgg cgtttgacta
    14581 catcatcgct atggacggca agaatttgtc cgaattggaa aaaacttttg gcaggcggcc
    14641 ggaaaaaata ttcaagctga ccgacctgat acccgaaagc ggttacgacc atgtccccga
    14701 tccgtggtac atgggtgatt ttgaagaaac atacaggctt gcggatgcag gctgtcgggc
    14761 attattggaa aagatttcca aataaagcaa ttgaatacaa acacaaatat aaaaccgcct
    14821 cctgtcgtat cggtcgttcg gacggcataa acagggaatt tatgaaaaca aatttcaaac
    14881 agaaaattat cgaacaggca cgcagagagg acttgcaggt aaccgctttg cgcgagcagg
    14941 tattagatat tgtcttgcag caaagcggcg tgattaaagc ctacaatgtt ttgtcacaga
    15001 tgcagcagca gagcgaaggc gtgcttgcac cgcctaccgc ctaccgtgcc cttgattttt
    15061 gggcggatca gggcgtttta cacaaagtgg cggcggtcaa cggctatatt ttgtgcagcc
    15121 acgcgcagca cgagtgcaac gaccattgcc acgaccacga agaagccgaa gcgcaccaca
    15181 gcgcgtttat tttggtctgc accgaatgcg gcgcggcgga cgagcaaacc ctcagccacg
    15241 agtgggcggc actgcgtgca ggcgttgccg aaagcggttt tgcgctgaaa gaagaacacg
    15301 ttgttttaac tggaatctgt aaaaaatgtc agaagtgaaa aaaaccaaag tccacctgat
    15361 ttcaggtttt ctgggaacag gcaaaaccac cgcgctcaaa agcctgatgg cgcaaaaaga
    15421 cccgaacgaa aaatgggtca tcatcgtcaa cgagttcggc gaaatcggca ttgacggcgc
    15481 ggtattgagc gacaacggca tccctgtggc agaaatcgcc ggcggctgtt tatgctgcac
    15541 cgccggcccg caaatgggcg taaccgtgca gaaaatgctg cgcgacgcca aacccgaccg
    15601 cctgatgatt gaggcaagcg gactggcgca cgccgccagc gtcatcgacg aattgaaagc
    15661 caaacctctg gacagtcttt tggaaatcgg cgccgtcttt accgtcgtcg atccgcgcca
    15721 gttcatcaat cccgattacg cgcaacaggc gttgtataaa gaccaaatcg gcatttgcga
    15781 cgtattggcc gccggcaaaa ccgatttatg cacccccgaa cagcttgccg aatttcatga
    15841 caaagcggca aaactgttcc cacccaaagc taaagtggtc gaagtccaaa acgcacaact
    15901 cgatatccaa tggctcgata ttcccgtagt tgaaaaatca cgctaccgcc tcaaagccct
    15961 gccggacaac accatgggct tccagtcgca aggtttcaca ttccccgccg gacgcgattt
    16021 cgacggcgaa aaattgacca acttcttcaa tgatttgccc aaaatgaccg aaggactcgt
    16081 ccgcgccaaa ggcgtgttcc aagtattggg aacgtgggtg tggcttaact gggtggacgg
    16141 gcagtggggc gcgaaccaag tgtcttggcg gcgcgattcg cgtttcgagc tgattgccaa
    16201 atcgtttgac gcggatttaa tcgaacaaaa acttaaagac gcattggaat agcgttcacg
    16261 cgctttcaga cggcatatga aatgaaaatg ccgtctgaag gctttaggag gacgggatga
    16321 aacccaaatt caaaaccgtt ttaaccgcgc tgcttttggc ggtttccctg ccgtctatgg
    16381 cggcaacccg cgtcctgatg gaaaccgata tgggcaatat ccgtttggtt ttggacgaat
    16441 ccaaagcctc caaaaccgtt gccaatttcg tgcgctatgc ccgaaaaggc ttttacgaca
    16501 acacgatttt ccaccgcgtc atcggcggct tcgtcatcca aggcggcgga ttgaccgagg
    16561 acttggtgca aaaggcaacc gataaggccg ttgccaacga atccggcaac ggcttgaaaa
    16621 ataccgtcgg caccatcgca atggcgcgga cggcagaccc cgattccgcc gccgcccaat
    16681 tctttatcaa tctggcggac aacggttcgc tcgactacaa aaacggacaa tacggctaca
    16741 ccgttttcgg cagggtagaa agcggaatgg acaccgtttc caaaatcgcc cgcgtcaaaa
    16801 ccgccacgcg cggcctttat caaaacgtac ccatacagcc cgtcaaaatc cgccgcgttg
    16861 ttgtcgagta atataacggg aaaccttcag aaagccgaaa cggaaaaagc aggcgtttgg
    16921 ggttgaaaag cgtctgcttc gggcttttaa aatgccgtct gaaacgccaa acgggcttca
    16981 gacggcattt ttgacggcgg aggtctatgg gccgcaggtt ttcggcttgt tcgccagaat
    17041 gttgatgact ttgcgttcgg ctttttgcgg ctcgattttg atttcgctct catcttcttc
    17101 gctgccgtct gaaaagcgtt cgggcatttt ttcgctgtca aaagccaaat cgccgccgtg
    17161 tttcagattt tgaccgcgtt ccaatccggc aaagtcaaag agttcggtat cggcaaggtg
    17221 ggaagggacg acgttttgca gggcggagaa catcgattcg atacggccgg ggaagcgttt
    17281 gtcccaatcg cgcagcatat cgccgattac ttggcgttgt aggttgggct gcgagccgca
    17341 gaggttgcac gggatgatgg ggaactgttt caattcggcg tatttgatta agtctttttc
    17401 tttcacatac gccagcgggc ggatgacgat gtgttcgccg ttgtcgctca ccagcttggg
    17461 cggcatggct ttgagtttgc cgccgtaaaa catatttaaa aacatggtgg cgaggatgtc
    17521 gtcacggtgg tgtcccaagg cgattttggt gcagcccaat tcttttgcgg tgcggtagag
    17581 gatgccgcgc cgcaggcggc tgcacagcga acaagtcgtt ttgccttcgt ccaacacgcg
    17641 tttgacggtg gagtaagtgt cttcttcaac gattttgtag ggaacgccga tgctttcgag
    17701 ataggtcggc aatacttctt cggggaagcc cggctgtttt tggtcgagat tgacggcgac
    17761 cagttcaaaa tcaatcggcg cgctggcttg gagccggcgc aggatgtcta acagggcgta
    17821 gctgtctttg ccgccggaga ggcagaccat gattttgtcg cccggctcga tcatgttgaa
    17881 atcgttaatc gtgtcgccga cggcgtggcg caggcgtttg ctgagtttgt tgttttcgag
    17941 ttcttgcttg gtttttttgg acatggcggt ggtttgaaaa attagggatg cggcattgta
    18001 accgaaaaca ggggcggcaa tgccgtctga agggcttcag acggcattag agggcttatt
    18061 ctgcattttt ggttttaaag aagagatgaa ccgctttgaa gataccgccg tttgggacgg
    18121 tgagttcttt ttgcgcggcg gagaatttaa tcacggcaag ggcggtaaag ttttccgaat
    18181 cttgaacgct gtcgagtacg atgccggctt cttcgccgtc cgccgtcagc aggatgcccg
    18241 cttcggctgc cgaatttccc gacaataccg ccaagccgcg tttgacctgc ccccgatact
    18301 gggcgcgcgc gatgatttcc tgtcccgggt agcagccttt tttgaagtgt acgccgccga
    18361 tgatgtgctg gttgagcatt tgggcgacgg cggtttcttt ggtagccgcg catatccacg
    18421 gataaccgct gcggatttcg tgcagccgcc acgcgttttc ggcggcagcg tcataagggg
    18481 gtagggcggt ttcgggggcg atgtgcaaaa tgccccgatg gtgcaggatg acggaacaga
    18541 tgccgtctga gacgcattcg gaggtaaagg cgagactggg ttcttgcgcg gcaagcggtt
    18601 cggcggatgc tgccaattcc gcgccgacgg cgtaatcttc aaggatttca aaaacggctt
    18661 tggcgcgcaa cacaaacatc cgcaggcgtt tgaccgttgc ttcaagcaaa tcttgcgcca
    18721 taatcagcag caaatcgtct ccacggttga cgacaatcat attggcgatg acgcggcctt
    18781 tgggcgtgtt gtaagtcgcg taacacgcct gcccggcctg aagattattg atgtcgttgg
    18841 aaagctgtcc gtgcaggaag gtttggcggt cttcgccgct gacgcgcgcc acgccgaaaa
    18901 agggcagtaa ggttttcatc atttgcgtac tctgaaaata taaggaaatc tgtttatgca
    18961 gttgccgcgt ctctcttcac ggcggttatt ttgatttcga cgcgccactc cggacgggcg
    19021 agccgcgctt ccacgcaggc gcgggcgggc gttctgccgg cggcaaccca agcgtcccac
    19081 acgccgttca tttccgcata gtcgcccata tcacgcaggt agatgaccgc atccaaaacg
    19141 tgtgccttgt ccgagccgca ttccgccagc cagcggtcgg tttgggcaag cacgtcggca
    19201 gtctgttcgg cagccgtttc accgttttcg ggaaccatgc cggagaggaa aatcaagccg
    19261 cccgcgcaaa ccgcttcgga atagcggggc gttgtgccga aataccggat atccatatcg
    19321 gtttccttcg ataaagggga tatatggtaa cattgcgctt gaccgatttc catgttttgc
    19381 atgacgaaaa atgagtaaac acacttatcc gataacacct gccgtacgcg ttttgcgtga
    19441 aaacggcatc gaatttgaac cttttaccta tgcctatgag gaacacggcg gcacggcgca
    19501 gtttgcccga ctgttcggca aagacgaaca cttggtcatt aaaaccattg ttttgcaaga
    19561 tgaaaacggt aaggggccga ttgtcttgat gcacggcgac aaacagattt caacccgcaa
    19621 tctggcgcgg catttgggtg cgaaacacat cgaacccgcc gcgcctgcgc aggcaaacaa
    19681 gtggacgggc tatctggtcg gcggcacaac gccgttcggc atccggacaa aattggatat
    19741 ttacgtcgaa cagtcggtga tggatttgga aaccatctat atcaatggcg gaaaacgcgg
    19801 gttcattatc ggtatccgcc ccgatgattt aaatattttg aacccgaaaa caatacaggc
    19861 agcggtttga ccgggaagta taaggagcaa tatggacaaa gatttgtatg ccgtattggg
    19921 cgtgtcgccg caggcggggg cggacgaaat caaacgcgcc taccgcaagc tggcgatgaa
    19981 ataccatccc gaccgcaatc cgggcaatct gcaggcggaa gaaaagttca aagaaatcca
    20041 acgggcttac gatacgcttt ccgacctgtc aaaacggacg caatacgacg cgtccttcag
    20101 acggcatgag gaacgcgggc ggcaggaaga ggcattccgc cgcgaacagg cgcgcaggga
    20161 gcagttttac ggcgaacaga tgcgccgcga acaggcgttc agacgggagt ttgaacggca
    20221 ggcttcacgt tcgcgccatg cttacgaacc gtccggcagc ggaagcgggc gcaactatat
    20281 cctcgccgcc tacatcctgt tcggtttggg tgcaatcatg cagttcatgc ccatagtcgg
    20341 cgtgattctc gcctatatga aacggaacag tttggacagc attgtctatg ccgcacatac
    20401 cgaatacctg attaaaacct tttggcgcac attttggctt tatcttttgg gcgcgctgac
    20461 tgcccgtttc ggcatcggcg tgctgattat tattgcaacg accgtctggt atttctaccg
    20521 catcatcgcc ggctttatcc gcttcaacga cggcagggcg gttgcgcccg agaaatggat
    20581 atagagcatg gcctacctgt taatcagcat cgtgttcagc gtgtcggttt ccattttgct
    20641 gaaaatggca aggaagaaaa aaatcgacat cgcgcaggcg gtcgccgtca attatgtggt
    20701 cgcggtcata ctgaccctgt cggtattgaa gccggatgtc ggcaatatcg gtgcattttt
    20761 gccgacgtgg ccgctgtttg ccgctttggg cgtgctgctg ccgtccgtat ttgtcattat
    20821 gggcaaatcc gtagaatccg ccggtatcgt caaatccgac gcggcgcagc gtttgtcgct
    20881 gtttttaccg attgttgccg ctttgacgct gtttggcgaa aaactcagtg aaggcaaact
    20941 gatcggactg tgcctcgcct ttgccgcact gttctgcctg ctttggaaaa gcgacagcgg
    21001 caaaaaatca ggcagcgcgt ggcggcaggc gttattgctg ctcggtgtgt gggcgggtta
    21061 cggcattatc gacatcctgt tcaaacagat tgccaaaagc ggcacggcat ttgcgggcaa
    21121 cctgctggtt gcatttgcgc tggcgggtgt gctgatgttt gcctgcctgt ttgccaaatc
    21181 ggtcagatgg cgcgttgaga gcgtggtcgg cggcatactc ttgggcggtt tgaattttat
    21241 gaacatcgta acctacatca ctgcgcacca aatgatgaag gacagtccca cgctggtttt
    21301 tgccggtatg aatatcggtg tgattgtttt agggacgctt tcgggcgcat tgttctttaa
    21361 ggaaaaaatc aacacaatca atacggcagg cattgtactg tcattatgct ccattgcctg
    21421 cctgttctat tggacagaag ttaaggcact gttcggcata taatccggct gattgatata
    21481 acaaa
//
LOCUS       DAXGCP010000025        21384 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.025, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000025 DAXGCP010000000
VERSION     DAXGCP010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21384
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.025"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            50..819
                     /locus_tag="ACFJCW_000852"
                     /pseudo
     CDS             50..819
                     /locus_tag="ACFJCW_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776012.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            846..1538
                     /locus_tag="ACFJCW_000853"
     CDS             846..1538
                     /locus_tag="ACFJCW_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC4151045.1"
                     /translation="MLCLENVRFEILRDPIVRDFSLNLQQGEVKALFGPSGCGKTTVL
                     RLIAGLETPKSGTIRNTFHKTGFLFQENRLPENLTAMQNIAIFMDNPDEGEIVALAAK
                     VGLTAGDLNKYPTELSGGMAKRVAFLRLLLCGCDLALLDEPFVGLDRDLRDILVAMLV
                     EKIERQGMACILVTHDRFEAARLSHEIMLLSAKGMNVQNVITLPTPLSERDSAFEEVV
                     VAREFQGIHYYE"
     gene            1731..2345
                     /locus_tag="ACFJCW_000854"
     CDS             1731..2345
                     /locus_tag="ACFJCW_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HFC4151046.1"
                     /translation="MFSTVITAAVLYIATAVDLLVILLIFFARANTRKEYRDIYIGQY
                     LGSVILILVSLFLAFVLNYVPEKWVLGLLGLIPIYLGIKVAIYDDCEGEKRAKKELDE
                     KGLSKLVGIVALVTVASCGADNIGLFVPYFVTLDLVDLLVTLLVFLILIFVLVYTAQR
                     LANISGVGEIVEKFSRWIMAVIYIGLGLFIIIENNTIRTIISII"
     gene            2641..3736
                     /locus_tag="ACFJCW_000855"
                     /pseudo
     CDS             2641..3736
                     /locus_tag="ACFJCW_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675858.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
     gene            complement(3783..5972)
                     /locus_tag="ACFJCW_000856"
     CDS             complement(3783..5972)
                     /locus_tag="ACFJCW_000856"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HFC4151047.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPPGTRVLVPFRNKTVVGMV
                     WETDIAPDMDAARILSVQTVFVEEKPLPQSWRDLLAFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQANAQA
                     AKLIEDWAEQGWIETTEAAKPVLRPYRGQASHSEFVLNTGQQKASDEIQTALGRFRSF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SRMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPLPDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQGGCPVVLGSATPSLESWHKAQSGAYRLLQLTERAHASAQLPQVDIL
                     NIGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRARQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRALLPKAAVV
                     RVDRDSTAHKNDWADLYRRIANDEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADAMEFLNAAKETLAPLLPESVSRFGAAPMLMVRLA
                     ERERAQVFLESTSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            6112..6897
                     /locus_tag="ACFJCW_000857"
     CDS             6112..6897
                     /locus_tag="ACFJCW_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HFC4151048.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAESAVKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRQGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRTQSGYSPMPQLEEIIRKNQQ"
     gene            complement(6996..8930)
                     /locus_tag="ACFJCW_000858"
     CDS             complement(6996..8930)
                     /locus_tag="ACFJCW_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HFC4151049.1"
                     /translation="MSLIECKNINRCFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGMGGKERSARADKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIRRLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIREKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSMGTNTISIFPGRGFGDRRSGKIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTRVAEKGLAELLKARHGTEDFFMNNSDSIRQ
                     MVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICIIGGLVGVGLSAAVSLVFNHFVTDFPMDISAASVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(8996..10174)
                     /locus_tag="ACFJCW_000859"
     CDS             complement(8996..10174)
                     /locus_tag="ACFJCW_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HFC4151050.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKDDATSKEDLESAQDALAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAIPVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNPDGKLATGMTTQNTVEIDGVKNVLLIPSLTVKNRGGKAFVRV
                     LGADGKAVEREIRTGMKDSMNTEVKSGLKEGDKVVISEITAAEQQESGERVMGGPPRR
                     "
     gene            10400..10789
                     /locus_tag="ACFJCW_000860"
     CDS             10400..10789
                     /locus_tag="ACFJCW_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC4151051.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLSEVK
                     STLLMNAQNLERYYRQKGTFDKYDKNKLKQNKYFNITLSEVSPDHFTLKAAPNPMTNE
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            complement(10883..14368)
                     /gene="smc"
                     /locus_tag="ACFJCW_000861"
     CDS             complement(10883..14368)
                     /gene="smc"
                     /locus_tag="ACFJCW_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HFC4151052.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNQQQDLLDYAQWQQSLAAADKATAQHQSLQAQQDETAAQVQALNNEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHRQNLHQRIERDKQAAQAQLQRIRQE
                     QQQIRVQLEENELQVEEKQTELAEWAMQVAEHEERLPELEEVQATLNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATDHAAAPQLWQHITAPAEWQHALSVILAERLHARSVPNSFVPPAPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQSDLGTHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLAPGLSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRTAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHTSDGLSDDIATLQEAAAELEHQQQTTAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYRQQIARLEQQTLDWQERRQELALAYETEFQNDEQHIKLDELT
                     ETVHTLDEEYIAVQEKLAQIQEQGREQYARVQTLQTKLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESAKVLNSSIGSLTRQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQAAIALLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCKLVKEMSVQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAEAV"
     gene            14753..15421
                     /locus_tag="ACFJCW_000862"
     CDS             14753..15421
                     /locus_tag="ACFJCW_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151053.1"
                     /translation="MGLRQKLRGIIPNLATSIGTSAEANAPGALALRGSSEASKKFSI
                     AEGYLASSDGYGAIAIGSAAKIKQLEKGTINHIVGNDNKGLYVDADGNVTKITVRTES
                     EKDILSRYGQTYGAVALGFRSSSHNLFASSFGAFSTATAIESLAVGDSSQSTGYRSAT
                     FGSHSRALAEESLALGYETRANAYGSVALGAESVANEENTVSVGSDTLKRKIVNVADG
                     TEDL"
     gene            15393..15878
                     /locus_tag="ACFJCW_000863"
     CDS             15393..15878
                     /locus_tag="ACFJCW_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA C-terminal domain-containing protein"
                     /protein_id="HFC4151054.1"
                     /translation="MSPMARKIYDAVNVRQLNRLSKRTNRVGASAAALASLKPAQLGK
                     NDKFAFSLGFGSYKNAQAVAMGAVFKPAENVLLNVAGSFAGPDRAFGAGVSWKFGGKP
                     TPAVAAQNAAHPAKVLQLRQEVAALRARQAETDRKLHKQAEMENELQQLRRALSELKK
                     H"
     gene            16087..16809
                     /gene="lpxH"
                     /locus_tag="ACFJCW_000864"
     CDS             16087..16809
                     /gene="lpxH"
                     /locus_tag="ACFJCW_000864"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HFC4151055.1"
                     /translation="MRPSYFISDLHLSEKHPELTELLLRFLRSAAAGQARAVYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGRDFCRQAGMTLLPDY
                     SVLDLFGSNTLICHGDTLCTDDKAYLRFRRIVHCRRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPPEEC"
     gene            17078..18664
                     /locus_tag="ACFJCW_000865"
     CDS             17078..18664
                     /locus_tag="ACFJCW_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HFC4151056.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYAALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(18830..19033)
                     /locus_tag="ACFJCW_000866"
     CDS             complement(18830..19033)
                     /locus_tag="ACFJCW_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HFC4151057.1"
                     /translation="MDNLNPQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLGEGESG
                     SVACPYCGTRYRLDGKMPHHYYA"
     gene            19149..19646
                     /locus_tag="ACFJCW_000867"
     CDS             19149..19646
                     /locus_tag="ACFJCW_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HFC4151058.1"
                     /translation="MTALTLPEDIRQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRHWKIKAVPKVLDKAKAL
                     YEQHGETIETLADGGADIESLRKQFPDFEEWDGAYYEAAEQDLPLLAEHILSNRAAFA
                     HIGQA"
     gene            19728..20918
                     /locus_tag="ACFJCW_000868"
     CDS             19728..20918
                     /locus_tag="ACFJCW_000868"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HFC4151059.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PIVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIAAEFAKRQLNAQTIWISNPTWSNHNAIAKAVGIQDKPYRYYDAAKHCLDW
                     DGMIEDLNQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     STQDFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKV"
     gene            complement(20888..>21384)
                     /locus_tag="ACFJCW_000869"
     CDS             complement(20888..>21384)
                     /locus_tag="ACFJCW_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153708080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4151060.1"
                     /translation="CQRVCPDETGFDRRLFRPYARSLKGQMAKARISGKRYRRLSLVS
                     AQVGNRPIAPMVCQNTVAGVFFEARFQQCLLPALAQKSVIISDNARFRRMGALRGTAE
                     KLGHKVLPPAPCSPEPNPIEKVWANIKRYLRTVLSDYARFDDALLSYFLILIDYTFTM
                     LSHR"
BASE COUNT         4625 a         5900 c         5682 g         5177 t
ORIGIN      
        1 aattccaagc taaggctatc ctttccaaac catccccatc aaccaaacca tgattaaaac
       61 cgacaaaatc cgcaaaccgc agcctgcgct gttttacatc atcgactacc tttggagcgg
      121 ctttgccggt ctgagcgtgg cgatggtggt ggtggcgttg tgggcgtggg gcagcgccgt
      181 gttcggcgag tttatgctgc ctgcgccggt agaggtgttt caaaaatctt tggatttatt
      241 gaaacatttt caggaaaatg aaatcgggat ttcgctgtgg cggtcggtag tgggtatttc
      301 ggttgctttg atagcaggat tggcggcggg gctggtggcg ggcagtttta agacggcgat
      361 ggcgttgctt aagcctgtga ttacgatttt gttagcaatg ccgccgatta tttgggtggt
      421 gatggcgttg ttttggttcg ggttcggcaa tccgagcgtg ttgtttacca tcattgtgtt
      481 ggttgcgccg ctgacgtttg cgagtgcggc ggtcggaatg gcgagcgtga acaagcagca
      541 tgaggagttg tttgacgctt ataaattagg ccgtctgaaa aaaatccgct atctgtatat
      601 cccgcatctg acgggctatg tgatttccag cgtcggcgtg gcggtggcga tgggggtgaa
      661 ggcggtgatc atggcggaac tcttaggcgc gagcaaaggc gtgggcgcgc ggattgcgga
      721 cgcgagggca atgctgtaga cttcgacggt aatggcttat gtggtgttgg tcatggtatt
      781 tgtgtcgctg tttgaatacc tgattccaag cctttgtaaa ttttgtttat gccgtggagg
      841 agatgatgct ctgtcttgaa aacgtgcgtt ttgaaattct ccgcgacccc atcgtgcgcg
      901 atttcagttt gaacctgcaa cagggcgaag tgaaagcctt gttcgggccg agcggctgtg
      961 gcaagacgac ggttttacgg ctgattgcgg gcttggaaac gccgaaatcg ggcacgatac
     1021 gtaatacttt ccacaaaacg ggttttctgt ttcaggaaaa ccgcctgccg gaaaacctga
     1081 ccgcgatgca gaatatcgcg atttttatgg acaacccaga cgaaggcgaa atcgtcgcgc
     1141 tggcggcgaa agtcgggctg actgcgggcg atttgaacaa atatccgacc gaattgtccg
     1201 gcggcatggc gaaacgggtg gcgtttttgc gcctgctgct gtgcggctgc gacctagcct
     1261 tgctggacga accgtttgtc ggtttggacc gcgatttgcg cgatattttg gttgctatgc
     1321 tggtggaaaa aatcgagcgg cagggcatgg cgtgtatact ggtaacgcat gaccgcttcg
     1381 aagccgcgcg cctgagccat gaaattatgc tgctttccgc taagggcatg aacgtgcaaa
     1441 acgtgataac cctgcccacg ccgctgtccg aacgcgattc ggcttttgaa gaagtcgtgg
     1501 tggcaaggga gtttcagggg attcattatt atgagtgatg aggggatttt gagtgtctga
     1561 caaaccttac ggttcgttgc cctctcccta accctctccc acggggagag ggttagcaag
     1621 cctcaggctt gcctctttag cgaaagatac gaatctgtta tccgaacgcg attcggtttt
     1681 tgaaaaagcc gtggtgccaa gggggcaggg gattcattat gaggtgcttt atgttttcga
     1741 ctgtgattac tgctgctgtt ttatatattg ctacagcagt agatttgttg gtaatactat
     1801 taatattttt tgctagagca aatactagaa aagaatatcg agatatttat atcggacaat
     1861 atttaggttc tgtaatttta atattagtta gtttatttct agcttttgtt ttgaattatg
     1921 ttccggaaaa atgggtgttg ggtttattag gtttaatacc gatttactta ggtattaaag
     1981 ttgctattta cgacgattgt gagggcgaaa aaagagctaa aaaagaattg gatgaaaaag
     2041 ggttgtcaaa attagtcggt attgttgctt tggttacagt tgctagttgt ggtgcagata
     2101 atattggact ttttgttcct tactttgtga ctttagatct tgtcgactta ttagttactc
     2161 ttcttgtatt tttaatattg atttttgttt tagtatatac agcacaaaga ttggctaata
     2221 tttcaggtgt tggtgaaatt gtagagaagt ttagtcgttg gataatggct gttatttata
     2281 ttggtttagg gttatttatt attattgaaa ataatacaat tcgaacaata atatcaataa
     2341 tatgaatgac aagggcattt cagtatctga caaaccttgc ggttcgtttc cctctcccta
     2401 accctctccc acaggagagg ggttcaggtt gctgaaaatc agagggcgaa ggattgggga
     2461 tcaaatggaa ggtaaaacct gaaaatgttc gggtttgaca gcccgattcc ctctccccgt
     2521 gggagagggc tagggagagg gcaagcaagc cgcaggcttg cctctttggc gaaaaataca
     2581 accctgtccg cccaataaat ccatacccga aagcatcttc atacagaatc aagccaagcg
     2641 atgaataaat tttttaccca ccctatgcgc ccgtttttcg tcggtgcggc agtacttgcc
     2701 atactcggtg cgttggtgtt ttttcatcaa ccccggcgct atcatcctgc accgccaaat
     2761 tttcttggaa cttatgctgc cggctgcata cggcggtttt ttgactaccg ctttgttgga
     2821 ccggacgggt ttttcaggca acctgaaacc tgccgctact ttgatggcgg tgttgttgct
     2881 tgttgcggct gttttattgc cgtttttacc gcaacttgcc gcatttttcg tcgccgccta
     2941 ttggctggtg ttgctgctgt tctgcgcctg gctgatttgg ctcgaccgca acaccgacaa
     3001 cttcgctctg ttgatgttac ttgccgcatt taccgttttt cagacggcct atgccgtcag
     3061 cggcgatttg aacttactgc gcgcgcaagt gcatttgaat atggcggcgg tcatgttcgt
     3121 atccgtccgc gtcagcgtcc ttttgggcac ggaaaccctg aaagaatgcc gtctgaaaga
     3181 ccccgtattc atccccaacg ttatctataa aaacatcgcc atcaccctgc tgctgcacgc
     3241 cgccgccgaa ctttggctgc ccgcgcaaac cgccggtttt actgcgcttg ccgtcggctt
     3301 catcctgctc gccaagctgc gcgaactgca ccatcacgaa ctcttacgca aacactacgt
     3361 ccgcacttat tacctgctcc agctctttgc cgccgcaggt tatctgtgga caggcgcggc
     3421 gaaactgcaa aacctgcccg cctccgcgcc cctgcacctg attaccctcg gcggcatgac
     3481 gggtggcgtg atgatggtgt ggctgactgc cggactgtgg cacagcggct ttaccaaact
     3541 cgactacccg aaactctgcc gcatcgccgt ctccatcctt ttcgcctccg ccgtttcgcg
     3601 cgctgtttta atgaacgtga atccgatatt cttcatcacc gttcccgaga ttctgaccgc
     3661 cgccgtgttc atgctttacc tgctgacgtt cgtaccgatt tttcgagcga acgcgtttac
     3721 agacgatccg gaataaaaat gccgtctgaa acggttttca gacggcatcg gattgccaat
     3781 gatcaagcct cctgcggatc gacatccacc gaccatcgga ttttgccgtc gcggttctgc
     3841 tgcaacacct gcacccacaa actcacggcg cggtgcaaat cttgtcggga tgttgattcg
     3901 aggaaaactt gcgcacgttc gcgttcggca aggcgcacca tcagcatcgg ggcggcaccg
     3961 aaccgggaga cgctttcggg caagagcggg gcgagggttt ctttggcggc gttgagaaat
     4021 tccatcgcat cggcaacacg cggcgcatcg gcacggacgg ccgtctgaaa accgaaaggc
     4081 ggcatggcga acatttgccg ttcgttcaat tcgttttcgg caaacacggc gtagtcctgc
     4141 gctttgacgg cggcgaagac agggtgttcg ggcagttggg tctgtatcag caccttgccg
     4201 ggtttgtcgg cgcgccccgc cctgccggac acttgcatca gctcggcaaa cagcctttcc
     4261 ggcgcacgga aatccgcgct gtacaggctg ccgtcggcgt tcaacacgat aacgaggttg
     4321 agccgcgcga aatcatggcc tttggcaagc atctgcgtgc cgaccagaat gtcgatttcg
     4381 tcgttggcga tgcggcggta caaatctgcc cagtcgtttt tgtgcgccgt actgtcccta
     4441 tcgacgcgga cgacggctgc cttgggcagc aaggcgcgca gggtttcttc gacgcgctgc
     4501 gtaccgtgtc cgacggcggt caggtcttgg ttgccgcagt cgggacattt gaacgggatg
     4561 ggttcgcggt ggtcgcagtg gtggcagcgc agttggcggg cgcgttggtg cagcaccatt
     4621 ttggcggagc agttcgggca gccgaaggta tggccgcagt cgccgcaaaa cagcgcaggc
     4681 gcgaagccgc gccggttaag gtacaccagc gacataccgc ccgcttcaaa gttctgtttc
     4741 aaaagctgca aggcttgcgg tgagaagccg ttatcgagtt tcagacgacc tatgttgagg
     4801 atgtccactt gtggcagttg cgcggaagca tgggcgcgtt cggtcagttg cagcaggcgg
     4861 tacgcgccgc tttgcgcctt gtgccaactc tccaagctgg gcgtggcact gcccaacacg
     4921 acgggacagc cgccctgctt cgcccgccac accgccaaat cgcgggcgtg gtagcgcaat
     4981 tcgttgtctt gtttgaacga gccgtcgtgt tcctcatcga ccacaatcag cccgacatca
     5041 ggcaaaggcg taaacaccgc cagccgcgtg ccgatcacca gcttcgcctg ccccaacatc
     5101 gcgcgcagat aatcctgcgt gcgcctgcct gccgccatcc ggctgtgcaa cacggcggtc
     5161 ggcacgtcgg caaaacggtt ttccacccgc tttaaaagct gcggcgtgag gttgatttcg
     5221 ggcaacagaa acaacacctg tcgcccctgc gccaacactt tcgccatcgc atcgaaatac
     5281 acctcggtct tgccgctgcc ggtaatgccg tacagcagaa acgaccggaa gcgtcccaat
     5341 gccgtctgaa tttcatcgga agccttctgc tggccggtat ttaatacaaa ttcagagtgc
     5401 gaagcctgcc cgcggtacgg ccttaaaaca ggtttcgccg cttccgtcgt ttcaatccag
     5461 ccctgctccg cccaatcctc aatcaatttc gccgcctgcg cgtttgcctg tttcaacgcc
     5521 gccatcgtca tttcgcccga cagcagcgcg tcccacaaag ccgctttttt gttgaaccga
     5581 gccggcggcg gcgtttgcgc cctgcccgct tcgttcaaag cataaaacaa cggcggctgc
     5641 ggcatttcca ccgcgcgcgt ttccttcaaa ccctgcggca atgcggcaaa tacagcctgc
     5701 ccagtcggat agtggtaata acgcgacgta aacgccaaca aatcacgcca gctttgaggc
     5761 aacggctttt cttccacaaa gaccgtctga acgctcaaaa tccgcgccgc atccatatcg
     5821 ggcgcaatat ccgtttccca caccatcccg acaacagttt tattgcgaaa aggcacaagc
     5881 acccgcgttc ccggaggaag cggctcggaa tgcgaataag tcaaaaggcc gtctgaaagc
     5941 ggcacgttta cagcgatgcg atggtagatc atacaggcag gcaaatcatt tttttgcgta
     6001 ttttaacagc cggaagctat tttcagacga taaattgagc ctcggcgcaa tgcaggcgca
     6061 acagaggttt gatacaatgc cacttttcca acacgctcaa tcatctttga tatgaaaacc
     6121 aagttaatca aaatcttgac cccctttacc gtcctgccgc tgctggcttg cgggcaaacg
     6181 cccgtttcca atgccaacgc cgaatccgcc gtcaaagccg aatccgccgg caaatccgtt
     6241 gccgcttctt tgaaagcgcg tttggaaaaa acctattccg cccaagattt gaaagtgttg
     6301 agcgtcagcg aaacaccggt caaaggcatt tacgaagtcg tcgtcagcgg caggcagatt
     6361 atctacaccg atgccgaagg cggctatatg ttcgtcggcg aactcatcaa catcgacacg
     6421 cgcaaaaacc tgaccgaaga acgcgccgcc gatttgaaca aaatcgactt cgcctccctg
     6481 cctttggaca aagccatcaa agaagtacgc ggcaacggca agctgaaagt cgccgtcttc
     6541 tccgaccccg attgtccgtt ctgcaaacgc ttggaacatg agtttgaaaa aatgaccgac
     6601 gtgacggttt acagctttat gatgcccatt gccggcctgc acccagatgc cgcgcgcaag
     6661 gcgcaaatct tatggtgtca gcccgaccgt gccaaagcgt ggacggattg gatgcgtcaa
     6721 ggcaaattcc cggtcggcgg cagcatctgc gacaatcccg tcgcggaaac cacttccttg
     6781 ggcgaacagt tcggcttcaa cggcacgccg accctcgtct tccccaacgg gcgcacccaa
     6841 agcggttaca gcccgatgcc ccaactggag gaaatcatcc gcaaaaacca gcagtaaacc
     6901 cgcaatgaaa aaggcttgga accatgttcc aagccttttt caaatgccgt ctgaagcctg
     6961 tcgcggcagc ttcagacggc atctttgttc aaacctcaat cctgcgccaa tgcatctatc
     7021 ggattgagtt tggctgcctt attggcgggc ataaagccga acgcgatgcc gattccggtc
     7081 gaacaggcga ccgccccgat aacggatgcc gccgaaatgt ccatcgggaa atcggttaca
     7141 aaatgattga acacgaggct gacggcggcg gacaaaccta cgccgaccaa gcctccgatg
     7201 atgcagatta acaccgcctc aatcaaaaac tgctgcaaaa tattgccgcg ccgcgcgccg
     7261 attgccatcc gtatgccgat ttctttggtg cgctcggtaa cggacaccag cataatgttc
     7321 atcacaccga tgccgccgac taccaatgaa atcagggcga tggaggaaat cagcagcttc
     7381 atcgtaccgg tggtgctttc gaccatctgc ctgatgctgt cgctgttgtt cataaagaag
     7441 tcttccgtgc cgtgccgtgc tttgagcagc tcggccagcc ctttttcggc aacccgggta
     7501 ttggcattgt ctttgatttt gacggtgatg gagttggtgt ggctctcgcc tgtgatttgg
     7561 tgcatcaccg tcgtataggg cgaccaaagc atcagcacgt cggaattgcc gaaagcattt
     7621 tcgtcttttt tcatcacgcc gatgacggtc aaggggcgtt tcctgaacaa aatggtttta
     7681 cccaacggat ccgaatccgc aaagagtttg tctttgacat tttggtcgat aacgacgact
     7741 tgcgcgtctt ctttcacatc gttttcgtca aacagccgcc ccgtttccag cttcagcccg
     7801 cgcacgtcga aatattgttc gcccacgccg tacaaagaag cggtcaggtc ggtattgcgg
     7861 taagtcagcg tgccgccgct cgaagtcatg ggcgtggcgg aggcaacgta gctttgtttg
     7921 gcgatgattt ttgcgtcgtc tatggtcagg gttttgattt tgccgctgcg cctgtcgccg
     7981 aagccgcgcc cggggaagat gctgatggtg ttcgtcccca tcgaactgat gtcttcgagg
     8041 atttttttct gcgaaccgtt gcccagcgcg acgacggaga caaccgaagc gataccgatg
     8101 atgatgccga gcatggtcag aagcgaacgc attttgtgcg ccaatactgc ttgcaccgac
     8161 attctgaagg cttcgacaaa ctggtcgtaa taaaacgacc acgaggcttt ttcccgaatc
     8221 ctcccgacat tgcttgcggg gatttcggga tttttcgagg tgtcggaaat gatttcgccg
     8281 tcccggattt cgatgacgcg gttggcgttg gcggcaatgc cggggtcgtg cgtgaccata
     8341 atgacggtat gcccggcttc gtgcagcctg cggatgattt ccatcacatt tttgccgctg
     8401 gcggtatcga gtgcgccggt cggctcgtcg gcgaagatga tttctccgcc gttcatcagg
     8461 gcgcgggcga tggagacgcg ctgctgctgt ccgcccgaga gttcgccggg cttgttgccc
     8521 tctttacttg ccaaacccaa atcctgcaag agtttgtccg cccgcgcgga acgctctttg
     8581 ccgcccatac ccatatacac ggctggcagc gcgacgttgt cccttgcggt cagcgagctt
     8641 aagaggttgt agcgttggaa gatgaaaccg aagcgttcgc ggcgcaatgc cgccagttcg
     8701 tcaggctgca ttttggcagt ttcgatgccg tcgattcggt acgaaccgga accggcggta
     8761 tccaaacaac cgagtatgtt catcagcgtg gacttgcccg aaccggactg cccgatgatg
     8821 gcgacaaaat cacccttctc tatcgacaga ctgatgtctt tcaaaatatg gacgcggttc
     8881 tcgccgctgc cgaagcagcg gttgatgttt ttacattcga tcaagctcat aatattccgt
     8941 aaatcaataa caaatgccgt ctgaaaccgt ttccgtgttc agacggcata ttcgtttatc
     9001 ggcgcggcgg gccgcccatg acgcgttcgc cgctttcctg ttgctcggcg gcggttattt
     9061 cggagatgac cactttgtcc ccctctttca acccgctttt cacttcggta ttcatactgt
     9121 ctttcatacc ggttcggatt tcgcgttcca ctgccttgcc gtccgcaccc aacacgcgta
     9181 cgaacgcctt gccgccgcga tttttcacgg tcagcgacgg aataagcaac acatttttca
     9241 caccgtcgat ttcaaccgta ttctgcgtcg tcatccccgt ggcgagtttg ccgtccggat
     9301 tcggcacaaa cgaacgggca taataataga ccgcattgga agccgtatcc gtactgctgt
     9361 tgtagccgcc cgacgacatc gtggtcagcc cggggtcgac gctgtcgagc ttcgccttaa
     9421 tcggcgtatc cggttcggac aaaatcgtaa acgaaatgtc ctgccccgcc ttcaccttgg
     9481 taatatcgcc ctcggcaatc tgcattttgt tcaacatcat atccagattc gccaattgga
     9541 caatcgtcgg cgtagactgc gccgcgttca cagtctgccc ctcttccacg ggaatcgcta
     9601 ccaccgtgcc gtccatcgtt gcggtaatgc gcgtgtagcc caattccgac tcggcggtat
     9661 tgatggaaat tttgctctgt ctgattagag ccttcagctc ggcaacattg gctttggcgg
     9721 cggcaagcgc atcctgcgcg ctttccaaat cttctttaga ggtcgcatca tccttccaca
     9781 acgccgcctg acgcttatat ttcttctccg cgctgcccaa tgcaatctgt gccgacacca
     9841 gcttcgcctg atacgtttcc aacttggatt tttccgtatt gagcgtattg gtctgcgagg
     9901 tcgaattgat ttccgcaatc aaatcgccct ttttaacctg ttgcccgagt ttgacataaa
     9961 gtttcttaat ctgccccgat gcctgcgcgc cgaccgatac caggttggac ggcgaaatct
    10021 cccctgttgc agaaaccgtc cggctgatgt cgccgcgcct gaccgcttcc gtaatataag
    10081 cagcctgcgg ctcgggcttc agataagacc atccgcccca aaccgctgcc gccgcgaccg
    10141 ccgcaacagc cgcccatttc atcatttttg ccatgttttc aattctctgt atgcgtcaat
    10201 cccataaacc ggaagcggat tctaccgcaa gtccctgccc catccaaggc ggcaaactgc
    10261 cgacaataaa aataaccatt tgttttaaat ggcttataca atctgctttc ccgaaaattt
    10321 caatccgttt acatattccg ccatttccga tacggcgtta taatgtcgcc gaccgacaaa
    10381 caaatggaaa cacattgcta tgaaaaacgt tcaaaaaggc tttacgctgc tcgagctgat
    10441 gattgccgtc gccatcctcg gcatcctgac gctcatcacc tacccttcct ataaaaccta
    10501 catccggcgc gtccgcctgt cggaagtcaa atccaccctg ctgatgaacg cgcaaaactt
    10561 ggagcgttac taccgccaaa aagggacgtt tgacaaatac gacaaaaaca aactgaaaca
    10621 aaacaaatat ttcaacatta ccttaagcga agtcagcccc gaccacttca cccttaaggc
    10681 cgcccccaat ccgatgacca acgaaggcga aacctgcgtc gtcacgctca acgacggcgg
    10741 taccattgcc gcttccggta caaaccaatc ctgccccggc ttcgactgat tggctgttgc
    10801 agtcggcatt gtgcctaaac catctataaa aatgccgtct gaacgctgtt cagacggcat
    10861 ttttgacatc ccgatacgcc tttcaaacgg cttccgccat ttccaacgcc tgcttgatgt
    10921 ctacggcgac gacgcgcgac acgccttttt cctgcatggt tacgccgacc agctgctccg
    10981 ccatttccat ggtcaggcgg ttgtgggaga tgtagaggaa ctgggtttgc accgacattt
    11041 ctttgaccag cttgcagaaa cgcgaggtgt tggcatcgtc cagcggggca tcgacttcgt
    11101 ccagaaggca gaagggggcg gggttgaggc tgaacagggc gaacacgagg ctcatggcgg
    11161 tgagggcttt ttcgccgccg gagaggaggt ggatggtgct gtttttcttg ccgggcggac
    11221 gcgccatgat ggacacgccg gcggtcagga ggtcgtcgcc tatcattttg agggtggctt
    11281 cgccgccgcc gaacagagtc gggaagaagg tttggacttt gccgttgacg gcgtcgaaag
    11341 tttctttgaa acgcgctttg gttttgtcgt cgatttgggc gatggcttct tccaaaagcg
    11401 cgatggcggc ctgcacgtct tcgctctggc tgcggtagta gccgtcgcgt tcgcgcgctt
    11461 cttcgagttc ttgcagggcg gcgaggttga cggcgccgag ggcttcgatt tgccgggtaa
    11521 ggctgccgat gctgctgttc aatactttcg ccgattcttt cgccaacgct tcgagcgcgt
    11581 ccagatcggc agcgcgttcg gtcaggtttt gatggtagcg tttggcgttg atcagggcct
    11641 cctgctgctg caacagggcg gtttgggtgg cggcctgaag ctgcggcagc ttggtttgca
    11701 gggtttgtac gcgggcgtat tgctccctgc cctgctcctg aatctgcgcg agtttttcct
    11761 gcacggcgat gtattcttcg tccagcgtgt gtacggtttc ggtcaactcg tcgagcttga
    11821 tgtgctgctc gtcgttttgg aactcggttt cataggcgag ggcaagctct tgccggcgtt
    11881 cctgccagtc cagggtttgc tgttcgagcc gggcgatttg ctgccggtag ttttgttttt
    11941 gctggttgag tttgtggacg gcgacttcgg caagcccgta ttggcggttg gcttccaaca
    12001 gggcaagctg cgcctgtttc agacggcctt gctgctcttg gcggctgtgc gcggtggttt
    12061 gctgctggtg ttcgagttcg gcggcggctt cctgcaaagt agcgatgtcg tctgaaagcc
    12121 cgtcggacgt gtgttgcaac acggtctgct cttccgccaa ctgtgccagt tcgcgctcga
    12181 tgtgttcgcg gcggatttgc ccttggttgg tgcgcgccag aagttcggcg gtgcgttgct
    12241 gcgcttgact gtattggcgc gtgtgttgct gttgctgctg catcagattt ttgtgctgca
    12301 cttcggacga gcgcacggca gcctccgcct gtttgaacgc ggcttcggcg gcggaaagtc
    12361 cgggggcgag gttttccagt tcggacgcga tgccgtcgag gcgcgctttt tgggcaatca
    12421 ggctttcctg cgcgggcttg gcatagagca ggacgctgac tttatcgacc tgatggcctt
    12481 cgggtgtgag ccagatttga tgcgtgccca aatcgctttg atgcgcgagg gcgtagctca
    12541 aatcgggcgc gcacaatacg ccgtcgagcc agtggtgcaa tgccgtctga aacggcggct
    12601 gcgcttggat ttggttcagc aatgcctgta cgggcaggga ttttttgatg ccgccggaga
    12661 ggccgtctga aagccatgcc gcctgcccct gcggcaaagg tgcgggcggt acgaaactat
    12721 tcggcacgct acgggcgtgc aggcgttcgg caaggatgac ggacagggcg tgctgccact
    12781 cggcgggcgc ggtgatgtgt tgccacagtt gcggcgcggc ggcgtggtcg gttgcctgcc
    12841 aaaagtcggc ggcttcctgc tgttgcgaca ggatttgcga caacgcctgc tgctgcgcct
    12901 gcaaggtaat gtgttgctgc ttcaggcttt ggaagcggtt tgaggccgtc tgaaacgcct
    12961 cgcgggcggc gtgcaaggct tcttcggcgg caatgatttg ttcttcgtaa tgctcttgcc
    13021 ggctttgcaa caaggcggcg gcttcctgag cggcggcggt ttcggcctcg tcgggcaggt
    13081 tcagggcttg gttttcctgc ttcagacgac ctttgcgctc ttcgtgcttg gcaacggttt
    13141 gttcggcatg ggcaagctgc tgctgcttca acgccagttc gcggcggatg cggtttgcct
    13201 cgtcctgctg ggtttggaag gcagcgttga gcgtggcttg gacttcttcc aattcgggca
    13261 gacgctcttc gtgttcggca acctgcatcg cccattccgc caattcggtt tgcttttctt
    13321 cgacctgcaa ctcgttttcc tcaagctgca cgcggatttg ctgctgctcc tgccggatgc
    13381 gttgcaactg cgcctgcgcc gcctgcttgt cgcgttcgat gcgttggtgc aggttttgcc
    13441 ggtggcggat ttgttcttcc aaacgggcaa tctgctcgcg caacacgccg cgtttgttgc
    13501 tcaattcgtg tactgcctgc tgctgcgact gttcggcagt ctgcaaggcg tgtacttcgt
    13561 tatttaacgc ctgaacctgt gcggcggttt catcctgctg cgcctgcaaa gattgatgct
    13621 gcgcggtcgc cttgtcggcg gcggcaagcg attgctgcca ttgggcgtaa tcgagcaaat
    13681 cctgttgttg attcaactgc gcggtcaggg atttgtagcg ttcggcggtt tccgcctgtt
    13741 tttccagctt ttccacctga cgcgccaact cgttctgcaa atcgcccaaa cgctgcaaat
    13801 gctcgcgcgt gtctttcaga cggccttccg tctccttgcg gcgttcctta tatttggaca
    13861 cgcccgccgc ctcctcgata taggcgcgca actcctccgg ccgcgcttcg atgatgcgcg
    13921 aaatcatccc ctgctcaatg acggcataac cgcgcgcgcc cacgcccgta cccaagaaca
    13981 aatcggtaat atcgcggcgg cgcacggtct gattgttgat gaaataagtc gattccccct
    14041 gacgcgtcag ctgccgcttg atgctcacct cggcatactg cccccacgcg ccctgcaaac
    14101 tgtggtcgct gttgtcaaat accagctcca ccgaagccct cggcgcagga cggcgcgtcg
    14161 ccgcaccgtt aaaaatcacg tcctgcatac tctcgccgcg aagctgcttc gccgaagcct
    14221 cgcccaacac ccagcgcacc gcgtcaatca cattcgactt gccgcagcca ttcggcccga
    14281 taaccgcgac aagctgcccc ggaacatgaa tcgtggtcgg gtcggtaaaa gatttgaagc
    14341 cggagagttt gatgtgggtc aggcgcataa tggtcggaaa aaataaaaaa gaagcgtatt
    14401 ttaacggaaa tcccgccgca ccaccccata tcttgccggc aaaaccttac cgcatcccgc
    14461 cccggtgcgg caggattttg cacatcccgg ccatccgtat taaaatcttt gcgtttccca
    14521 cactttcctg acaaatatac ggaggaggat tccatgaaaa caaaaacagt caagcaagca
    14581 agcaagcaag caagcaagca agcaagcaaa atagtctaac ccccctttct ttaatcgctc
    14641 tacttaattt ccacttcttt ttatcctgtt cgatcttttg cggctgcacc tcaagaaata
    14701 aactattcgt tatcaggcgg taaagtttac gcagataagt tcagtatcgc cattggggtt
    14761 gaggcaaaag ctcaggggga taataccaaa cttagcaacc tcaatcggca catctgccga
    14821 agcaaatgca cccggggcat tggctttaag gggaagttct gaagcatcga aaaaatttag
    14881 tatagcagaa ggctatctgg catctagtga tggctatggt gcaatagcga ttggttctgc
    14941 cgccaagata aagcaattgg aaaaaggcac aataaatcat attgtgggaa acgataataa
    15001 aggtctttat gtcgatgcag acggcaatgt aacaaagata accgtaagga ctgagtcgga
    15061 aaaagatatt ctctcaagat acggtcaaac ttacggtgcg gtggcactag ggtttagatc
    15121 ttcttcacat aatctttttg ccagttcatt tggagcgttt tctacagcca cagctattga
    15181 aagcttggca gtcggcgaca gcagccaatc aacgggctac cgcagtgcta cttttggcag
    15241 tcacagcagg gctttggcag aagaaagttt ggcattaggt tatgaaactc gggcaaatgc
    15301 ttatggttcc gttgctttag gtgcagaatc tgtggcgaat gaagaaaata ccgtatcagt
    15361 gggttccgat acattgaaac ggaaaatcgt taatgtcgcc gatggcacgg aagatttatg
    15421 atgcagtaaa tgtccgccag ttgaaccgct taagcaaacg tacaaaccgc gtcggcgcaa
    15481 gtgctgcggc gttggcttcg ttaaaacctg cacaattagg caaaaacgac aaattcgcct
    15541 tttctttggg ctttggaagc tataaaaatg cccaagcggt ggcaatgggg gcggtgttta
    15601 agcccgctga aaatgtgttg cttaatgtgg cgggcagttt tgccggaccg gaccgggctt
    15661 tcggcgcggg ggtttcgtgg aaattcggcg gcaaaccgac acctgcggtt gccgcacaaa
    15721 acgcggcgca tcctgcaaaa gttttgcaat tgcggcagga agtggcggcg ttgcgcgccc
    15781 ggcaggcaga aaccgaccgc aaactgcaca aacaggccga aatggaaaac gagctgcaac
    15841 agttgcgccg cgcgttgtcc gaattgaaaa aacattgaag caataaacgt aaggcgggac
    15901 ggcggctctg cctttttccg atgccgcacc cgcgcgatgc cgtctgaagc cttcagacgg
    15961 catttttaac gcgcccgaac cccggttccg ccaatgcccg atgcttggcg cggcatttgc
    16021 cgtattgccc cgccgccggg cgcgttataa tccgccacga catccgcccg atttggaaac
    16081 ctgcctatgc gaccctccta tttcatttcc gacctgcatt tgagcgaaaa gcaccccgaa
    16141 ctgaccgaac tgctgctgcg ttttttacgt tctgccgccg ccgggcaggc gcgggcggtt
    16201 tatattttgg gcgatttgtt tgatttttgg gtgggcgatg acgaagtttc cgagttgaat
    16261 acttcggttg cgcgggaaat caggaaattg tccgacaaag gcgttgccgt gttctttgtc
    16321 aggggcaacc gcgatttcct aatcggtcgg gatttttgcc ggcaggcggg tatgacgctg
    16381 ctgccggatt actcggtttt ggacttgttc ggcagcaaca ccctgatttg ccacggcgac
    16441 acattgtgca ccgacgacaa ggcatacctg cgtttccgcc gcatcgtgca ttgcaggcgg
    16501 ctgcaaaaac tgttcctgat gctgcccctg aagtggcgca cgcgccttgc cgccaaaatc
    16561 aggcgtgtca gcaaaatgga aaaacaggtc aagcccgccg atattatgga tgtcaatgcc
    16621 gcctttaccg cgcggcaggt tcgcgccttt aacgcggaaa ggctgataca cggacacacc
    16681 caccgcgagc atatccatca cgaaaacggc tttacccgca tcgttttggg cgactggcat
    16741 aacgactatg cttcaatcct ccgcgtggac ggggacggcg cggtattcgt gccgccggaa
    16801 gaatgctgaa aatgccgtct gaagcctttc gggcggcttt ttctacacgc ccctttccca
    16861 cactccctcc gccgcatcat caccatcctt aacccgcatt aatagccatt atcgataaaa
    16921 tgcttgaccg attacataag attacgtaaa gtgtgcaaac gcataataat tggtcttacc
    16981 aatttatctt ttaaccaaaa tatcgggtgt gcgggatttg aacgtctttc caaacctcga
    17041 cgcgccttat gatgcaaatg cctaaaaagg attcgttatg gcacttttcc tcagcatatt
    17101 ccccatcgtc ctgctgattt ggctgatggt gaaaaaaaac agtatgcctt cctacgtcgc
    17161 actgccgatt accgcagtgc tgatttacgc catcaaactt ttctacttcg gcgatgcggg
    17221 aatgctgctc aacgccaccg ccgcttccgg cctcgtcaaa acgctcacgc cgattaccgt
    17281 gattttcggc gcgattatgt tcaaccgtat gatggaaacc acgggctgca tcgatgtcat
    17341 ccgcaaatgg ctggcgacca tcagcccgaa ccccgtagcg caactgatga ttatcggctg
    17401 ggcttttgcc tttatgattg aaggcgcatc cggcttcggc acgcctgccg cgattgccgc
    17461 gccgattctg atgagcttgg gcttcaatcc gttgaaagtg gcgattttca ctttggtgat
    17521 gaattccgtg ccggtatcgt tcggcgcggt cggtacgccg acctggttcg gtttcgcacc
    17581 gctgaacctg agtgccgaag acatcctcgc catcggcagg cagaccggcg tgatgcactt
    17641 cttcgcaggt ttcgtcatcc ctgtcatcgg tttgggcttc atcgtgcctt ggtctgaaat
    17701 ccgcaaaaac ttgggcttcg tcgccattgc cgtcttctcc tgcaccattc cttatgccgc
    17761 attggcgatg gtcaacgaag aattcccgtc gctcgtcgcc ggcgcaatcg gcctgatggt
    17821 gtccgtattc gccgccaacc aaggctgggg cttgagcaaa gaccacgcca aagacccgaa
    17881 tgccgaaaaa gtgccgttcg cccaagtcgc caaagcactc gcccctttgg gtatgctgat
    17941 cggcatgctg gtggttaccc gcatcaaaca gctcggaatc aaaggcattt tgaccagcaa
    18001 agaagaatgg ttcagcttcc aactgccgtt tgatttgtcc aaaattaccg tcagcgactc
    18061 cctgacgatt accttcggca atattttcgg acaagatgtc agcgcgtctt accaaacgct
    18121 gtacgtcccg gcttggattc cgttcgtgct gaccgtttgg atttgcatcc tgctgtataa
    18181 aaccaaattc aaagatgcct ggacgattta tgccgtaacc ttcaatcaaa ccaaaaaacc
    18241 gctgcttgcc ctgatgggtg cgctgattat ggttcagctg atgctggtcg gcggcgacaa
    18301 ttcgatggtg aaaatcatcg gtaaggaatt tgccgcaatg gcgggcgaac actgggttta
    18361 tttttcgccg tatctgggcg cgatcggtgc gttcttctcc ggctccaaca ccgtgtccaa
    18421 cctgaccttc ggtccgattc agcagcaaat cgcccttgat accggcctgt ccgtgaccct
    18481 gattctggcg ttgcagtccg tcggcggcgc gatgggcaat atggtgtgcc tcaacaacat
    18541 catcgccgta tgtaccgtat tggacgtgaa aaattccgaa ggtgcgatta tcaagaaaac
    18601 cgttatcccg atggcgattt acggcgtgat tgccgtcgtc gcggcaatga ttttcttcct
    18661 ctaggcgaaa cgccgccatc catagcggca gcacgcgggg aacggaaacc gccgctcgtc
    18721 cgggcggcgc gtcgggcaga atacccgtgc cggaacagcc cgccccgcca aacaaatgcc
    18781 gtctgaaacc ggaaaaggct tcagacggca tttttatcgc cgtttgcatt caggcgtagt
    18841 aatgatgcgg catcttgccg tcaaggcggt agcgcgtgcc gcaatacggg caggcaacgc
    18901 tgcccgattc tccttcgccc aaaggtaaaa acaccctcgg atgcccgttc cactgctcgt
    18961 tgtccggtcc cgagcaatac agcggcagat tttccggcaa cacggaaatt tcctgcggat
    19021 tcagattgtc catttgattt tcctttgcgt ggttggcgtg cgcccatttt acgccatcgg
    19081 caggctaaag gatattttcg gcgcaaagcc gcaatccgct ataatcccca cttttcagac
    19141 ggcataccat gactgcgctt acccttcctg aagacatccg ccaacaagaa ccatccgttc
    19201 tgctctatac cctcgtttcc gcctacctcg aacacaccgc ccaaaccggc gacgaatccc
    19261 tctcctgcct gtccgacgac cagcacacgc tgaccgcatt ctgctacctc gacagccaag
    19321 tcgaagaagg cggcttcgta cagcttatcg cctccggcta cggcgaatac attttccgca
    19381 acccgcttgc cgacagcctg cgccactgga aaatcaaagc cgtgccgaaa gtcttggaca
    19441 aagccaaagc cctctacgaa caacacggcg aaaccatcga aacgctcgcc gacggaggcg
    19501 cagacatcga atccctgcgc aaacagttcc ccgactttga agaatgggac ggcgcatact
    19561 acgaagccgc cgaacaagac ctgcccctgc ttgcagaaca catcctgtca aaccgggcgg
    19621 cattcgccca tatcgggcag gcgtgattgc gtctgtttcc agcccgtgta aaacagcgta
    19681 aaatcggcaa acccgaatta tcttccgtcc ccatcaagga gcaagctatg ttcttcaagc
    19741 acatcgaagc cgcccccgcc gatccgattc tcggtttggg cgaagcgttc aaagccgaaa
    19801 cccgccccga aaaagtcaac ctcggcatcg gcgtgtacaa agacgcatcc ggcgcgacac
    19861 ccattgtcaa agccgtcaaa gaggctgaaa aacgcctgtt ggaaagcgaa accaccaaaa
    19921 attacctgac catcgacggc gttgccgact acaacgagca aacccaaatc ctgctgttcg
    19981 gcaaagacca cgaaatcatc gccagccgcc gcgccaaaac agcgcaaagc cttggcggta
    20041 caggcgcatt gcgtattgcg gccgaatttg ccaaacgtca gttgaacgcg caaaccatct
    20101 ggatttccaa tccgacctgg tcaaaccaca acgccattgc caaagcggtc ggtatccaag
    20161 acaaacctta tcgctactat gatgccgcca aacactgctt ggattgggac ggcatgattg
    20221 aagatttgaa ccaagcgcaa aaaggcgaca tcgtcctgct gcacggctgc tgccacaacc
    20281 ctaccggtat cgaccctacg cccgaacaat gggaaacttt agcaaaactt tctgccgaaa
    20341 aaggctggct gccattgttt gactttgcct accaaggctt cggcaacggt ttggaagaag
    20401 atgcctatgg cttgcgcgtg ttcttgaaac acaatacaga attgctgatt gccagctctt
    20461 attccaaaaa cttcggcatg tacaacgagc gtgtcggtgc attcactttg gtggccgaag
    20521 atgaagaaac agcagcccgc gcccacagcc aagtcaaaac catcatccgt accttgtatt
    20581 ccaacccggc ttcacatggt gcgaacacca ttgcactggt gttgaaaaat gatgatttga
    20641 aagcacaatg gattgccgaa cttgacgaaa tgcgcggccg catcaaagcc atgcgccaaa
    20701 aatttgtcga gttgctcaag gccaaaggtt caacccaaga ctttgatttt attattgaac
    20761 aaaacggtat gttctctttc agcggcttga ctcccgaaca agttgaccgt ttgaaaaacg
    20821 agtttgccat ttatgccgtc cgttccggcc gcatcaacgt cgccggcatt accgacgaca
    20881 acatcgatta tctgtgtgaa agcatcgtga aagtatagtc aattaaaatc aaaaaatagg
    20941 acagtagtgc atcgtcaaat cgggcgtaat cagacaaaac ggttcgcaga taccgcttaa
    21001 tattcgccca cactttctca atcgggttgg gctcgggcga acaaggtgcg ggaggcaata
    21061 ccttatgtcc caatttttcc gccgttcccc gtaaggcacc catacggcga aatcgcgcat
    21121 tatctgaaat aatcaccgat ttttgagcca atgcgggcag taggcattgc tgaaaccgcg
    21181 cttcaaaaaa gaccccggcc accgtatttt gacaaaccat cggagcaatc ggccggttgc
    21241 cgacttgtgc ggacaccaaa gataagcgcc ggtatctttt cccacttatc cgcgctttcg
    21301 ccatttgccc tttcaggctg cgggcatagg ggcggaacag gcggcggtcg aatcctgttt
    21361 catccggaca aacacgttgg cagg
//
LOCUS       DAXGCP010000026        21261 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.026, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000026 DAXGCP010000000
VERSION     DAXGCP010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21261
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.026"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(1..300)
                     /locus_tag="ACFJCW_000870"
                     /pseudo
     CDS             complement(1..300)
                     /locus_tag="ACFJCW_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261624.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(353..711)
                     /locus_tag="ACFJCW_000871"
                     /pseudo
     CDS             complement(353..711)
                     /locus_tag="ACFJCW_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247143.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(738..1096)
                     /locus_tag="ACFJCW_000872"
                     /pseudo
     CDS             complement(738..1096)
                     /locus_tag="ACFJCW_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249814.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(1123..1452)
                     /locus_tag="ACFJCW_000873"
                     /pseudo
     CDS             complement(1123..1452)
                     /locus_tag="ACFJCW_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247143.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            1456..1764
                     /locus_tag="ACFJCW_000874"
                     /pseudo
     CDS             1456..1764
                     /locus_tag="ACFJCW_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
     gene            complement(1839..3893)
                     /gene="metG"
                     /locus_tag="ACFJCW_000875"
     CDS             complement(1839..3893)
                     /gene="metG"
                     /locus_tag="ACFJCW_000875"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HFC4151061.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGHECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVRKEHLADFTGFFIGYDNYYSTHSTENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKADSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNGKIEDTDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGKLKDVAGSALLAKLTAQSEAIAECYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTAAN
                     AARFLNLDAITWKNTRETLGEHAINKYEHLMQRVEQKQVDDLIEANKQSIQTASAPVE
                     EGKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIAA
                     SYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATADGKLKLLDVDAGAQPGDK
                     VG"
     gene            complement(4009..5847)
                     /gene="glmS"
                     /locus_tag="ACFJCW_000876"
     CDS             complement(4009..5847)
                     /gene="glmS"
                     /locus_tag="ACFJCW_000876"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HFC4151062.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRIGRVQLMEDAAREKGISGGIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGKLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKNGLPAERKVKVSELSPASLEPGPHSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSVCNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVVLFGLAVTLAKVRGVVSGEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNAAEGVHVI
                     RAPRHVGELSPVVHTVPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            6119..6625
                     /locus_tag="ACFJCW_000877"
                     /pseudo
     CDS             6119..6625
                     /locus_tag="ACFJCW_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224225.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6929..8254)
                     /locus_tag="ACFJCW_000878"
     CDS             complement(6929..8254)
                     /locus_tag="ACFJCW_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HFC4151063.1"
                     /translation="MKKHLLRAALYGIAAAILAACQSRSIQTFPQPDTSVINGPDRPA
                     GIPDPAGTTVAGGGAVYTVVPHLSMPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKRFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTERARFPIY
                     GIPDDFISVPLPAGLRGGKALVRIRQTGKNSGTIDNAGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKAYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSGNEGPVGALGTPLMGEYAGAIDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            8487..9306
                     /gene="efeU"
                     /locus_tag="ACFJCW_000879"
                     /pseudo
     CDS             8487..9306
                     /gene="efeU"
                     /locus_tag="ACFJCW_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
     gene            9303..10469
                     /gene="efeO"
                     /locus_tag="ACFJCW_000880"
     CDS             9303..10469
                     /gene="efeO"
                     /locus_tag="ACFJCW_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HFC4151064.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGS
                     VGIAVNDNACEPMNLTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVADSGFKDTANEADLEKLPQPLADYKAYVQGEV
                     KELAAKTKTFTEAVKAGDIEKAKSLFAATRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEHALWVEKDVSGVKETAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEAAGSKISGEEDRYSHTDLSDFQANADGSKKIVDLFRPLIEAKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLSEADRKALQAPINALAEDLAQLRGILGLK"
     gene            10777..12042
                     /gene="efeB"
                     /locus_tag="ACFJCW_000881"
     CDS             10777..12042
                     /gene="efeB"
                     /locus_tag="ACFJCW_000881"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HFC4151065.1"
                     /translation="MSQNQPAQPTKRNLFKTALAVGAIGAIGGYFGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPRQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPSAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKTVHLQEMRD
                     FPNDKLQKSWCDGDLSLQICAFTPETCQTALRDIIKHTAQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRRF
                     VEFWGRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGNTTPKDSHMRLANPR
                     DPEFLKKHCLFRRAYSYSRGPASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVGKGGFLGQGLPGV"
     gene            complement(12114..12443)
                     /locus_tag="ACFJCW_000882"
     CDS             complement(12114..12443)
                     /locus_tag="ACFJCW_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HFC4151066.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNETESAADLAAQVR
                     DANGAALQNGDTVILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIGCKIDGSAMNLK
                     SEFVKKA"
     gene            complement(12518..13888)
                     /gene="glmU"
                     /locus_tag="ACFJCW_000883"
     CDS             complement(12518..13888)
                     /gene="glmU"
                     /locus_tag="ACFJCW_000883"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HFC4151067.1"
                     /translation="MPQNTLNTVILAAGKGTRMYSQMPKVLHCIGGKPMVERVIDTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDAVWVEQTEQLGTGHAVKTALPHLASEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPTGLGRIIRDGSGSVTAIVEEKDASAT
                     QKTIREINTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVRPVRVRA
                     SHLAAGVNNKRQLAELERIFQTEQAQELLKAGVTLRDPARFDLRGRLKHGQDVVIDVN
                     VVIEGKVELGDNVEIGANCVIKNAKIGANSKIAPFSHLEGCEVGENNRIGPYARLRPQ
                     AKLADNVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSAITRNIEDNKLALARARQTVIEGWMR
                     PEKDKQ"
     gene            complement(13943..14218)
                     /locus_tag="ACFJCW_000884"
     CDS             complement(13943..14218)
                     /locus_tag="ACFJCW_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HFC4151068.1"
                     /translation="MRKTFLILMTPAALFLSGCAWETYQDGNGKTAVRQKYPAGTPVY
                     YQDGSYSKNMNYNQYRPERRAVLPDQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(14211..14924)
                     /locus_tag="ACFJCW_000885"
     CDS             complement(14211..14924)
                     /locus_tag="ACFJCW_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HFC4151069.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFHLINRAMTRYMARRLKLSES
                     AASDLRQDYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTRLHGMADTENTLCR
                     LNGRKAVFSNGPSFYVRAVAGALGLENCFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVRFGAKSHAPPFIDASVSDMAQLARYAETLSER
                     RQNHYNTRTNPENTKECYA"
     gene            14983..15984
                     /locus_tag="ACFJCW_000886"
     CDS             14983..15984
                     /locus_tag="ACFJCW_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4151070.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPESAP
                     VAVGLPSALAVDYGYVSVNYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANIGGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPKLAAKLVQWLQSPEV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPAHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            16078..16926
                     /locus_tag="ACFJCW_000887"
     CDS             16078..16926
                     /locus_tag="ACFJCW_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HFC4151071.1"
                     /translation="MDFKQFDFLHLISVSGWGHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSSLPLCRAQVIVGVDYNCDLKVAKEAVLKAAAEHPLSVQN
                     EERQPAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            16952..17437
                     /locus_tag="ACFJCW_000888"
     CDS             16952..17437
                     /locus_tag="ACFJCW_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HFC4151072.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGMLAAAFTSVAGSSQWFD
                     QSFVTYSNKAKEYRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGGESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLVENGGDA
                     V"
     gene            complement(17521..19089)
                     /gene="msrAB"
                     /locus_tag="ACFJCW_000889"
     CDS             complement(17521..19089)
                     /gene="msrAB"
                     /locus_tag="ACFJCW_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HFC4151073.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLH
                     EKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRNPNADLGSLKHSFYKPDTQKKDSAIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTENPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYYFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKAAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSFNMRRTEVRSRAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKGKVK"
     gene            19235..20488
                     /gene="ftsY"
                     /locus_tag="ACFJCW_000890"
     CDS             19235..20488
                     /gene="ftsY"
                     /locus_tag="ACFJCW_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HFC4151074.1"
                     /translation="MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVE
                     SLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAGEAAERVESAKEAVAETVGEAVG
                     QVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
                     GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPF
                     VIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVI
                     SQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKAIPGA
                     PHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVR
                     YIGVGEGIDDLRPFDARAFVDALLD"
BASE COUNT         4335 a         5427 c         6468 g         5031 t
ORIGIN      
        1 gtctttgccg gcgtctttga cgtcgtcttt ggcggcgtcg ttggcggctt tgtcgcgcgt
       61 aaccggctgt ccgcagaacc attttaccga accggcttca cgcttggccc acagggagag
      121 tcttttgcct ttgatttctt tgtttacgcc gcttgaaagc attttggcgg taacgacgcc
      181 ttttgcgacc gtaacgcttt caacatattt gcctttgatt gttgaagaag ctgccacgcc
      241 ggcagaagtg ttgtctttcg gccatatgcc gtgattcagg taatattcgg tgacggctga
      301 gggtaatacc cggtgatggc tgatttattt gaaatttaag gcctaatttg ccttatttgg
      361 cagatgacgt atcacggcag gttgacggca ggtgcttggt gtcgatgccg ttgttgtttt
      421 tgtcgtcggc ggtgacgtcg tcgttgttgg cgtcgttggc gttgcgctga accggccgtc
      481 cgcagaacca ttttaccgaa ccgtcttgac gcttggccca cagggagagt tttttgcctt
      541 ggatttcttt gtttacgccg cttgaattca ttgtggcggt gacgacgccg tttttgactt
      601 caacttgctt aacatatttg cctatgattt ttgaagaagc tgccacgccg gcagcgccgt
      661 tgtctttggg ccattcgccg ttttcaggta atattcggtg agggctgatt tatttgaaat
      721 ttaaggccta atttgcctta ttcggcagat gacgtatcac ggcaggttga cggcaggtgc
      781 ttggtgctga ttttgccgtt ggcgtcggcg tcgtctttga cggcgtcgtt ggggtcgtcg
      841 gcgttgtcgc gcttaaccgg ctgtccgcag aaccatttta ccgaaccgtc ttcacgcctg
      901 ccccacaggg agagtttttt gcctttgatt tctttgttta cgccggttga agccatttgg
      961 gcggtgacga cgccttttgc gacttcaact ttctgaacat atttgccttt gattgttgaa
     1021 gcggatgcca cgccggcagc gccgttgtct ttgggccatt cgccgttttc aggtaatatt
     1081 cggtgagggc tgatttattt gaaatttaag gcctaatttg ccttattcgg cagatgacgt
     1141 atcacggcag gttgacggca ggtgcttggt ttcgattttt ttggtgccgt cggctttgac
     1201 gtcgtcggcg tcggttttgt cgcgcttaac cggctgtccg cagaaccatt ttaccgaacc
     1261 ggcttcacgc ttggcccaca gggagagttt tttgtttttg atttcattgt ttacgccgct
     1321 tgaaagcatt ttggcggtaa cgacgccttt ttcgaccgta acgctttcaa catatttgcc
     1381 tttgatgtcg gaggcggatg ccacgccggc agcgccgttg tttgcgggcc atttgccgtt
     1441 attcgggtaa tgtccggcga aaacgaattg cggcagatga agccgggtgc ggttttgatc
     1501 aattgcgggc gcggcgggcc ggtggatgaa aacgcgctgc ctgccgcact caaatacggg
     1561 cagatcggcg gggcgggcgc ggatgttttg acgcaagaac cgccgagggg cggcaatccc
     1621 ttgctgaatg cacgattacc caatctgatt gttacgccgc ataccgcgtg ggcgagccgc
     1681 gaggctttgg atcggttgtt tgaaatattg ttggcgaaca ttcacgcctt tgtgaaaggc
     1741 gaggcgcaaa accgcgtggt ttgaacctgt cgggattgcg gaaaaaaacg ccgtctgaac
     1801 gcccaagggg ttcagacggc gttttttgag atttctgcct aaccgacttt gtcgcccggc
     1861 tgagcgcccg catccacgtc aagcagcttc agtttgccgt ctgccgtggc ggcggagagg
     1921 atcatacctt cggatacgcc gaattttgcc attttgcgtg gggcgaagtt ggcgactgcg
     1981 atgaccatgc gaccgttcaa ttcggcagga tttgggtaag acgcggcgat gccggagaag
     2041 atgatgcgtt tttcaaaacc gaaatcgagg tcgaatttca aaagtttggt gctgccttcg
     2101 acggcttcgc agttcaatac tttggcgacg cgcatatcga ttttcataaa gtcgtcgaag
     2161 cttgcctgtt cggcgacttt ttcgtattta ccctcttcaa cgggcgcgga tgccgtctga
     2221 atgctttgtt tgttggcttc gatcaaatcg tccacttgtt tttgctccac tcgttgcatt
     2281 aaatgttcgt atttgttgat ggcgtgttcg cccagggttt cgcgcgtgtt cttccaggta
     2341 atcgcgtcca gattgaggaa acgcgcggcg ttggcggcgg tttgcggcaa cacgggggcg
     2401 aggtaggcgg tcagcatggt gaaggcgttg atgagttcgc tgcatacttc gtgcaggcgt
     2461 tcgtcttgac cttcttgttt ggcgagctcc cacggtttgt tggcatcgac gtattcgttg
     2521 acaatgtctg ccaatgccat gatgtcgcgc agggcgcggg cgtattcgcg gttttcgtag
     2581 cattcggcaa tggcttcgct ttgcgcggtc agttttgcca ataatgcgct gccggcaacg
     2641 tctttgagtt ttccttcaaa gcgtttggcg atgaaacctg aagcgcgggc ggcgatgttg
     2701 acgtatttgc cgacgaggtc gctgttgacg cgggaaataa agtcttgcag gttcaaatcg
     2761 gtgtcttcga ttttgccgtt gagcttggcg gcgatgtagt agcgcatcca ctcggggttc
     2821 aggccttgtt ccaaatagga tttggcggtg atgaaggtgc cgcgcgattt ggacattttt
     2881 tgtccgtcca cggtcaaaaa gccgtgtgcg tacacgccgg tcggggcgcg gtggccggag
     2941 aaatgcagca tggcgggcca gaacagggcg tggaaataga ggatgtcttt gccgatgaag
     3001 tggtacatct cggtttggct gtcggctttg aagtattcgt cgaaatcgat gccgatgcgg
     3061 tcgcacaggt ttttaaacga cgccatatag ccgacgggcg cgtccagcca aacgtagaag
     3121 tatttgcccg gcgcgtcggg gatttcaaaa ccgaaatacg gcgcgtcgcg ggaaatgtcc
     3181 cagtcggaca gggtggtttc ttcgccttcg cccagccatt ccttcatttt gttgagggct
     3241 tcgggttgca gatggggctt gccgtcgtgc gggttgttgc cggaagtcca tgctttgagg
     3301 aagtcggcgc attcgcccag tttgaagaag aagtgttcgg attcgcgcaa ttcgggtttc
     3361 gcgccggaaa cggcggaata cgggttgatc agttcggtcg gggaataggt cgtgccgcag
     3421 acttcgcagt tgtcgccgta ttggtcttgg gcgtggcatt tcgggcattc gcctttgacg
     3481 aagcggtcgg gcaggaacat ttgtttttca gggtcgaaaa gctgctcgat gacgcggctt
     3541 tcgattttgc cgttggcttt cagcgcgcgg taaatgtctt gggaaaactg tttgttttca
     3601 gtggaatggg tgctgtaata attgtcgtag ccgatgaaaa agccggtaaa gtcggcaagg
     3661 tgctctttgc gcactttggc aatcatgtct tcgggcgcga tgccttgttt ttgcgcggca
     3721 agcataacgg gcgtgccgtg ggtgtcgtcg gcgcagcagt agtagcattc gtggccgcgc
     3781 agtttttgaa agcgcaccca aacgtcggtt tggatgtgtt cgaccatgtg gccgaggtgg
     3841 atgctgccgt tggcataggg cagggcggag gtaactaaga ttttgcgtgt catattgtgc
     3901 tttgcaaaca atgggtaaag gcggattata ccgcaaatca aacggggaaa tgccgtctga
     3961 agcctgaaaa atcgggcttc agacggcatt tttgccaacc ggcgggattt attcgacggt
     4021 tacggatttc gccaggttgc gcggcttgtc cacatccgtg ccgcgcgcga gggcggtgtg
     4081 gtaggcgagg agctgcacgg ggacggtatg cacgacgggg gacagttcgc cgacgtggcg
     4141 aggtgcgcgg ataacgtgca cgccttcggc ggcattaaaa ttgctgtcga ggtcggcaaa
     4201 gacgaaaagt tcgccgccgc gcgcgccgac ttcctgcata ttggctttga ctttgtccaa
     4261 caggctgtcg ttgggcgcga tgacgacgac gggcatgttt tcgtccacca aggcaagcgg
     4321 cccgtgtttc agttcgccgg caggataggc ttcggcgtgg atgtaggtga tttcctttag
     4381 cttcaacgca ccttcaaggg caatcgggta atggatgccg cgccccaaaa acagcgcgct
     4441 ggttttcttg gcaaactgtt gcgcccaagc ggcaatttgc ggttcgaggt tcaaagcgtg
     4501 ctgcacgctg ccgggaagct ggcggagttc ttcggtgtaa cgtgcttcat cttcgccgga
     4561 taccacgccg cgcactttcg ccagcgttac cgccaaaccg aacagcacga ccagttgcgt
     4621 ggtaaatgct ttagtcgagg cgacgccgat ttccgcaccg gcacgggtat aaagcacaag
     4681 gctgctttcg cgcggcaggg cggattccat cacgttgcag acggagaggc tgtggcggtg
     4741 tcccaaagat ttggcgtatt tcaaagcctc catcgtgtcc agcgtttcgc cggattggga
     4801 aatggtaatg accagttggt cggggtcggc aatcacgctg cggtaccggt attcgcttgc
     4861 gatttcgacg tcggccggga ttttggcgat ggattccaac caatatttgg cggtcagcgc
     4921 ggcgtaatag gacgtgccgc aggcaaggat tttgacgctg cggatgcttt caaacacgct
     4981 tttggcgttt ttgccgaagt tttcggggat gaatccgccg tcgaggaaaa cttccgccgt
     5041 gtccgcaatc gcgcgcggct gctcgtggat ttctttttgc ataaagtggc tgtgcggacc
     5101 cggttccaaa gaggcgggcg agagttcgga taccttgact ttgcgttcgg caggcaggcc
     5161 gtttttatcg gtcagccgtt tgatgccgtc tgaagccagc agcgcgatgt cgccgtcttc
     5221 gaggtacgcc acgcggcgcg taaaggcgat gacggcggat acgtccgaag cgataaaggt
     5281 ttcatcgtcg cccaaagcga ccaaaagcgg gcagcccata cgcgccacaa ctaattcatc
     5341 aggcttgtct tgggcaataa ccgcgatggc gtatgcgccg tggaaacgtt tgaccgcttc
     5401 ctgcacggct tcaaacaatt tgccgccgtt ttgcgcgtat tcgtgattga tgctgtgtgc
     5461 gatgacttcg gtatccgttt gcgattcaaa ccggtatccc aaaccttcca agcgtttgcg
     5521 ttcgctttca aagttttcga tgatgccgtt gtgtacgacc gcaatcatac cgccgctgat
     5581 gtgcgggtgg gcattcggct cggtaacgcc gccgtgtgtc gcccagcgcg tatgcccgat
     5641 gccgatgccg ccgctgatgc ctttttcgcg tgccgcgtcc tccataagct gcacgcgtcc
     5701 gatgcggcgc acgcgtttga ttttgccgtc ggtgttgacg gcaatgcctg atgagtcgta
     5761 accccggtat tcgaggcgtt tgaggccgtc ggtcagaaaa tcgacgacgt tgtgatgggc
     5821 gcggatggcg ccgacgatac cgcacataaa ctgttcctta gtatccggtt gaaaaaaaag
     5881 atgcggacgg cttccgtacc gcaccttccg tttcggatta taaaccgcct cccgcgccgg
     5941 aaaacagcaa aatgccgtct gaaggcttgg gcttgctcaa aaaagggagg gatttccccg
     6001 cctgaccggg atgggcgttc agacggcatt gcctgccgcc ggtttatagt ttttgcaaat
     6061 caatattaac aagctgaaaa aaaacaatat actcgcccgg tcttaatgtt aacggagtat
     6121 ggaaatgaaa caaatgcttt tggccgtcgg cgtggcggcg gtgttggcgg gctgcggcaa
     6181 ggatgccggc ggttacgagg gttattggcg cgaaaagtcg gacaaaaaag agggcgtgat
     6241 tgccgtcaaa aaagaaaaag gcaattactt ccttaataaa atcaacgtgt ttacaggcaa
     6301 ggaggagtct ttgcttttgt ctgaaaaaga cggcgcgctt tcgataaaca cggggatagg
     6361 ggaaatcccg atcaaacttt ccgacgacgg gaaagagctg tatgtcgaac gcaggcggta
     6421 tgtgaaaacc gatgcggcga tgaaggacaa aatcatcgcc caccagaaaa agtgcggaca
     6481 aacggcacag gcatacctcg acgcgcgaaa tgcgttgccg tcaaaccaaa cgtatcagca
     6541 gcgtcaggcg gcgatcgagc aattgaaacg gcggtttgaa gccgagtttg acgaattgga
     6601 aaaagaaatc aaatgcaacg gcagaacccc ggcattgttg ctttggcagg ggacaaccgg
     6661 gaggatgccg ccgtccgaat cggacgcgtg gtttccatac cggtacgggc gggcgggaat
     6721 gtccgccttt ttttgttcgg atgcgtttga atacccgtcc gattctgtcc gtttgcaagg
     6781 gggatttccg ttcgggcgga aatccattcc gtcaaataag aaaggcgttt tgtccgaccg
     6841 gccggcttgt gcctgcggta tcgcaaaact tcgccttaat gcgcccgatt ggctagggac
     6901 gggcttcgga cggcattgtt ttgccggttc acgggcggta ttcgggcttc atgccgttgg
     6961 gcaggagctg ccagacgtat cccgtggttt tctgtttgcc ggcaagttcg ccggcttcgt
     7021 cgccgtaacc ccaaaaataa tccacgcgca ccgcgccttt gatcgcgctg cctgtatcct
     7081 gcgccataat caggcggttg agggctttgc gggtaaccgg atgggcggtg gcgacaaata
     7141 agggcgcgcc caaggtaatg tagtgccggt cgattgcgcc ggcgtattcc cccatcagcg
     7201 gcgtgcccag tgcgccgacg gggccctcat tgccgcttcc ggcaagctcg cggaaaaaga
     7261 tatagctggg gttttgcccc aaaacttcgg cgaggcgttg cggattttgc cgcatatagg
     7321 ctttgatgcc ctgcatggag gtttgcccga gcttgaggta gcctttgtcc gccatatagc
     7381 gtccgatgga aacatacgga tgctcgtttt tgtcggcata gccgatgcgg atgtatttgc
     7441 cggacggggt tttcagacgg cccgagcctt gtatgtgcat gaaaaaaagt tcgacggggt
     7501 cttcggcgta accgagtatc ggggctttgc cgtcaagcgc gccgccgttg atttggttgc
     7561 gcgtgtggta ggggaggaag cggcttcctt caaacctgcc cttgattgcc gttgtgcgcg
     7621 cggtaatggg gaatcgggaa aggtcggcgg tatgcgtgcc gccggcattg tcgattgtgc
     7681 cgctgttttt tcccgtctgc ctgatgcgga caagggcttt cccgccccgc aaaccggcag
     7741 gcagggggac ggagataaaa tcgtcgggaa tgccgtaaat cgggaagcgg gcccgttccg
     7801 tccgcctgtc gtcgcccttc agcaccggct cgtaatagcc ggtaaccgta cctgcaaggc
     7861 ttccgttgcc tgcaacctgc cacggcgtga aatagcgttc aaaaaaccgc tttgcctgaa
     7921 aggaatgcac gggggtttga aaggcttggg cgcacacatc ctgccagcct tggcggtttt
     7981 tcaaattggc gcagccgagg cggaaggatt gcaggctttt ggcaaaatcc tgcgccgccc
     8041 agtggggcat ggacaggtgc ggcacaacgg tatagacggc cccgccgccg gcaaccgtcg
     8101 ttccggcggg gtcggggatg ccggccggcc ggtccgggcc gttgatgacg gatgtgtcgg
     8161 gttgcggaaa ggtttggatg ctcctgcttt ggcaggcggc gaggatggcg gcggcgatgc
     8221 cgtacagggc ggcgcggagc aggtgttttt tcataatgga caatgttgtc gtcagtaata
     8281 aaaaaagatg gtttcgggcg gcgttgcggt agccggggag aggggatttt aacacagggc
     8341 gcagccgcag cctgcggaac tttccgccac gcggcaatgc agataaaaat aacttgcatt
     8401 tgtatttgca agtaatgaaa atattccgat aatatattat taatcatcct tgttcattcg
     8461 cgtttacgct ggtcgctttt ttaattatgt tgcgcgaggg tatcgaagcc gcgctcatcg
     8521 tcggcatcgt tgccggtttt ttgaaacagt ccggacattc aaaaactgat gcctaaggtc
     8581 tggttcgggg tcgtccttgc ttctttgatg tgtttgggca tcggatacgg catccattcg
     8641 gcaacgggcg agattccccg gaagcagcag gagttcgtcg tcggcattat cggtttggtt
     8701 gccgtcgcga tgctgacttg tgtggtttta tggatgaaaa aggcggcgcg ttcgatgaag
     8761 cggcagcttc gggattctgt acaggcggct ttgaaccgtg gcagcggtca aggatgggcc
     8821 ttggtcggta tggcgtttct tgccgtggcg cgcgaaggtt tggagagcgt ttttttcctg
     8881 cttgccgtat tcaaacagag cccgacgtgg cagatgccgg ccggcgcggt agcgggggtt
     8941 ttggctgccg ccgtgattgg cgcgttgatt tatcagggcg ggatgcgcct gaatctggcg
     9001 aagtttttcc gttggacggg ggcgtttctg attatcgttg ccgccggtct gcttgccggc
     9061 tcgctgcgtg cgctgcatga ggcaggcatt tggaacgcgc ttcaggacat tgtgttggac
     9121 ccatcaaaat atttgcacga agacagtccg ttgggtgtgc tgctcggcgg atttttcggc
     9181 tataccgacc atccggcgca gggcggggcc ttggtttggc tgctgtacct tattcccgtc
     9241 atgatttggt ttttgcgcgg cagcaggccg tctgaaactt taacccgtaa agaggaattg
     9301 aaatgagaaa attcaatttg accgcattgt ccgtgatgct tgccttgggt ttgaccgcgt
     9361 gccagccgcc ggaggcggag aaagccgcgc cggccgcgtc cggtgagacc caatccgcca
     9421 acgaaggcgg ttcggtcggt atcgccgtca acgacaatgc ctgcgaaccg atgaatctga
     9481 ccgtgccgag cggacaggtt gtgttcaata ttaaaaacaa cagcggccgc aagctcgaat
     9541 gggaaatcct gaagggcgtg atggtggtgg acgaacgcga aaatatcgcc ccggggcttt
     9601 ccgacaaaat gaccgtaacc ctgctgccgg gcgaatacga aatgacctgc ggccttttga
     9661 ccaatccgcg cggcaagctg gtggtagccg acagcggctt taaagacacc gccaacgaag
     9721 cggatttgga aaaactgccc caaccgctcg ccgactataa agcctacgtt caaggcgagg
     9781 ttaaagagct ggcggcgaaa accaaaacct ttaccgaagc cgtcaaagca ggcgacattg
     9841 aaaaggcgaa atccctgttt gccgccaccc gcgtccatta cgaacgcatc gaaccgattg
     9901 ccgagctttt cagcgaactc gaccccgtca tcgatgcgcg tgaagacgac ttcaaagacg
     9961 gcgcgaaaga tgccggattt accggcttcc accgtatcga acacgccctt tgggtggaaa
    10021 aagacgtatc cggcgtgaag gaaaccgcgg ccaaactgat gaccgatgtc gaagccctgc
    10081 aaaaagaaat cgacgcattg gcgttccctc cgggcaaagt ggtcggcggc gcgtccgaac
    10141 tgattgaaga agcggcgggc agtaaaatca gcggcgaaga agaccgttac agccacaccg
    10201 atttgagcga cttccaagct aatgcggacg gatctaaaaa aatcgtcgat ttgttccgtc
    10261 cgttgattga ggccaaaaac aaagccttgt tggaaaaaac cgataccaac ttcaaacagg
    10321 tcaacgaaat tctggcgaaa taccgcacca aagacggttt tgaaacctac gacaagctga
    10381 gcgaagccga ccgcaaagca ttacaggctc ctattaacgc gcttgccgaa gaccttgccc
    10441 aacttcgcgg catactcggc ttgaaataag ccgcaagcgt tcagacggca tttggcggca
    10501 gataccgtct gaagttttat agcggattaa caaaaaccgg tacggcgttg ccccgccccg
    10561 gctcaaaggg aacggttccc taaggcgccc aagcaccggg cgaaccggtt ccgtaccatt
    10621 tgtactgcct gcggcccgcc gccttgtcct gatttttgtt aatccgctat atccgccata
    10681 tgttgcaggg cgggctttca gaccgccgct atcggttaat ggaaaaacgg cgtgcaggga
    10741 tgcccaccct gctgcacgga tattgaagga aacgccatga gtcaaaacca acccgcacaa
    10801 ccgaccaaac gcaatctgtt caaaaccgcc cttgccgtcg gcgcaatcgg cgcaatcgga
    10861 ggttatttcg gcggcaaaaa acagggcgaa accgccgaac gcaccgccga aagccaacac
    10921 tcgccccaag cctatccctg ctacggcgaa catcaggcag gtatcgttac gccgcggcag
    10981 gcgttttcca ttatgtgcgc cttcgacgta accgcgcaaa gtgccaagca gctggaaaac
    11041 ctgttccgca cactgaccgc ccgcatcgag tttctcaccc aaggcggaga ataccaagac
    11101 ggcgacgaca aactcccgtc agccggcagc ggcattttgg gcaaagcctt caaccccgac
    11161 ggattgaccg ttaccgtggg ggtgggcagc agcctgtttg acggccggtt cggactcaaa
    11221 gacaaaaaaa cggttcattt gcaggaaatg cgcgacttcc ccaacgataa gctgcaaaaa
    11281 agctggtgcg acggcgattt gagcctgcaa atctgcgcct tcacccccga aacctgccaa
    11341 accgccctgc gcgacatcat caaacacacc gcccaaaccg ccgtcatccg ctggagtatc
    11401 gacgggtggc agcctaaatc cgaacccggc gcgatggcgg cgcgcaacct gttgggcttc
    11461 cgagacggca cgggcaaccc caaggtttcc gatcccaaaa ccgccgacga ggttttatgg
    11521 acgggcgtgg ccgccaacag cctcgacgaa ccggagtggg cgaaaaacgg cagctatcag
    11581 gcagtccgcc ttatccgccg ctttgtcgag ttttggggca ggacgccgct tcaagagcaa
    11641 accgacattt tcgggcggcg aaaatacagc ggggcgccga tggacggcaa aaaagaagcc
    11701 gaccaaccgg atttcgccaa agaccccgag ggtaatacca cgcccaaaga cagccatatg
    11761 cgcctggcga atccgcgcga tcccgaattc ctcaaaaaac actgcctctt ccgccgcgcc
    11821 tacagctatt ctcgcggacc cgcctcaagc ggacagcttg atgtcgggct ggtgttcgtc
    11881 tgctatcagg caaatcttgc cgacggtttc atcttcgtgc aaaacctcct caacggcgaa
    11941 ccgctggaag aatacatcag ccccttcggc ggcggctatt tcttcgtctt gcccggcgtg
    12001 ggaaaaggcg gattcttggg acaagggctg ccgggcgtat aaacctgcct gacggacaaa
    12061 tgccgtccga accttgccaa acgggttcgg acgggatttt actgtttgga cggtcaggct
    12121 tttttgacga attcggattt taaattcatc gcgctgccgt cgattttgca gccgatgttg
    12181 tgatcgcctt cctgcaggcg tatgcctttg accttcgtac cttgtttgat cgtcatcgag
    12241 ctgcctttta ccttgaggtc tttgatgagg atgacggtgt cgccgttttg cagcgccgcg
    12301 ccgttggcat cgcgcacttg agccgcaagg tcggcggcgg attcggtttc attccattcg
    12361 tgggcgcatt cggggcagat gtattgtccg ccgtcttcat aggtgtattc ggaggcgcat
    12421 tgcgggcaag ggggtaatga catggtttgc cgtccttatc ggatgtttgt tttgggatgc
    12481 cgtctgaaac ctgaaaccgg tttcagacgg cacggcttta ttgtttgtct ttttccggcc
    12541 tcatccagcc ttcgatgacg gtttggcggg cgcgggcgag ggcgagtttg ttgtcttcga
    12601 tattgcgggt aatcgcgctg cctgcgcctg tggttacttt gttgcccagt gttacagggg
    12661 caaccagtac gcagttcgaa ccgatgcgca cttcgtcgcc gatgacggtt ttgtgtttgt
    12721 gcacgccgtc gtagttggca ataatcgtgc ccgcgccgaa gttggttttg ctgccgactt
    12781 cggcgtcgcc tatgtaggtg aggtggttgg ctttggtgcc tttgccgatg gcggcgtttt
    12841 tgatttcgac gaagttgccg acgtgtacat tgtcagccag tttggcttgc ggacgcaggc
    12901 gggcgtacgg gccgattcgg ttgttttcgc cgacttcgca gccttcgagg tgggagaagg
    12961 gggcgatttt gctgtttgcg ccgattttgg cgtttttgat gacgcagttt gcgccgattt
    13021 cgacgttgtc gccgagttcg actttacctt cgatgacgac gttgacgtca atcacgacat
    13081 cttgtccgtg tttcagacgg ccccgcaaat cgaaacgagc cggatcgcgc agggtcacgc
    13141 ctgctttgag caattcttgc gcctgttcgg tttggaagat gcgttcgagt tcggcgagct
    13201 ggcgtttgtt gttcacgccg gcggcgaggt gggaggcgcg cacccggacg gggcggactt
    13261 tgatgccgtc ggcaacggct ttggcgatga ggtcggttaa ataatattcg ccttgggcat
    13321 tgttgctgga aaggctgttc agccagtttt ccagtttggc gttgggcagg acgaggatgc
    13381 ctgtgttgat ttcgcggatg gttttttggg tggcacttgc gtctttttct tcgacaatgg
    13441 cggttacgct gccgctgccg tcgcggatga tgcgccccaa gcctgtcggg tcggcgggca
    13501 cgtcggtcaa cagcccgact tcgttgcctg cggcttcgag cagggtttcg agggtttcaa
    13561 cgtcaattaa aggaacgtcg ccgtacaaca ccagcgtgcg gccttcggag gcaaggtggg
    13621 gcagggcggt tttgacggcg tggccggtgc cgagttgttc ggtttgttcg acccagacgg
    13681 catcgcgttt gacagtgtct aaaacttgct ctttgccgtg tccgacgacg acgcagatgt
    13741 tttgcggatt cagcgcggcg gcggtgtcga taacgcgctc gaccatgggc ttgccgccga
    13801 tgcagtgcag cactttgggc atttgggaat acatgcgcgt gcctttgccg gcggcgagga
    13861 tgacggtgtt taaagtgttt tgcggcatag cgttttcctg tgccatgccg tctgaagcgg
    13921 tttcagacgg catagggtag gtttatcggt tttgaaactt tggtttttgc cagtgttggc
    13981 gatgctcttc gtcggcgttg ttgccggttt ggtcgggcag cacggcgcgg cgttcgggac
    14041 ggtattggtt gtagttcata tttttcgagt agctgccgtc ttggtaataa acgggcgtgc
    14101 cggcgggata tttttgacgg acggcggttt tgccgttgcc gtcttgataa gtttcccacg
    14161 cgcagcccga caaaaaaagg gcggcggggg tcatcaggat aaggaaggtt ttacgcataa
    14221 cattctttcg tattttcggg gtttgtgcgg gtattgtaat gattttggcg gcgttctgac
    14281 aaagtttctg cataccgtgc cagttgcgcc atatcgctta cggaggcatc gataaagggc
    14341 ggcgcgtggg attttgcacc gaaccggacg gttttcatgc ccaatgcttt tgcctgatgg
    14401 aggttgtccg cgctgtcgtc caccataatg cagcattcgg gcggtacgtc caacaggcgg
    14461 cagacattga gatacgcttg cggattgggt ttgtacagca gtccgaaatc atccgtgccg
    14521 aacagtgcgt cgaaacagtt ttccaaaccg agtgcgccgg caacggcacg gacgtaaaac
    14581 gacgggccgt tggaaaaaac cgccttgcgc ccgttcagac ggcatagggt gttttccgta
    14641 tccgccatgc cgtgcagcct ggtcaggatt gcatcgatcg gatggctttc gcgtaaaaat
    14701 tccgcaatgt cgatttcggg atggtggatt tgcagtccgg cgagcgttgc gccgtaacgg
    14761 tgccaatagt cttgacgcag gtcggacgcg gcggattcgg agagtttgag gcggcgtgcc
    14821 atatagcgcg tcatagcgcg gttgatgagg tggaagatgc ctgcgtcggc atcgtgcagc
    14881 gtgttgtcga ggtcgaacag ccacacggtc gggttttctt gcattttgaa ccgtgaaaat
    14941 ttgttagaat gttattttac agcgaataaa ggaagactcg gaatgaaacg gaaaatttgg
    15001 ctgctgccgc tgctggcggt ttcggcatac ctgcaggcgc agacggaagt caggctggcg
    15061 gtgcataagt cgttcagcct gcccaaaggg ctgattgcgc gcttcgagcg ggcaaacgat
    15121 gcgaaagtgt cgattattca ggcgggcggc gcgaacgaaa tgctcaacaa actgattttg
    15181 agccgagcca acccgattgc cgacgcggtg tacggtttgg acaacgccaa tatcggcaag
    15241 gcgcgggaaa tgggcatttt ggcggcggcg caacccgaat ccgcccccgt cgcggtcggg
    15301 ctgccttcgg ctttggcggt cgattacggc tatgtgtccg tcaattacga caaaaaatgg
    15361 tttgaaggca aaaagctgcc cctgccgcaa accctgcagg atttgacccg ccccgaatat
    15421 aaaaacctat tggtcgtgcc gtcccccgcc acatcttccc ccggcttggg cttcctgatg
    15481 gcgaacatcg gcggtctggg cgaagaaggc gcgtttaaat ggtgggcaca gatgcggcag
    15541 aacggcgtga aggtcgccaa aggctggagc gaggcgtatt acaccgactt ttcgcacaac
    15601 ggcggcgcgt atccgctggt ggtcggttat gccgccagcc ctgcggcgga agtatatttt
    15661 tccaaaggca aatacagcga gccgccgacg ggcaacctgt ttttaaaagg cggcgtattc
    15721 cgtcaggtcg aaggcgcggc ggtcttgaag ggcgcgaaac agccgaagct ggcggcaaaa
    15781 ctggtgcaat ggctgcaaag tccggaagtg cagcaggcgg ttccgtctga aatgtgggtt
    15841 taccccgccg tcaaaaacac gcgcctgccc gacgtgttcc gcttcgccca agccccggcg
    15901 cacactaccg cccccgcgca gcgcgatatt gatgcgaacc agcgcggatg ggtttcccgt
    15961 tggatcagga cggttttgaa ataaaacaaa cataccgccc cgcagggctt cagacggcat
    16021 ttttacacct gtgccgatta cgccgcacgg ggcggatgtt cgatcgagag gaaaacaatg
    16081 gacttcaaac aatttgattt tttacacctg atcagtgttt ccggttgggg gcatctggct
    16141 gaaaaggcgt gggcgttcgg gctgaacctt gccgccgcgc tgcttatttt cttggtcggg
    16201 aaatgggcgg cgaaacgcat tgtcgccgtg atgagggcgg cgatgacgcg cgcgcaggtc
    16261 gatgccacgc tgattagttt tttgtgtaat gttgccaata tcggcttatt gattttggtg
    16321 attattgccg cattgggacg gttgggcgtt tccacaacat ccgtaaccgc cttaatcggc
    16381 ggcgcgggtt tggcggtggc gttgtcctta aaagaccagc tgtccaattt tgccgccggc
    16441 gcgctgatta tcctgttccg cccgttcaaa gtcggcgact ttatccgtgt cggcggtttt
    16501 gaaggatatg tccgggaaat caaaatggtg cagacttctt tgcggacgac cgacaacgaa
    16561 gaagtcgtgc tgcccaacag cgtggtgatg ggcaacagca tcgtcaaccg ttccagcctg
    16621 ccgctttgcc gcgcccaagt gatagtcggc gtcgattaca actgcgattt gaaagtggcg
    16681 aaagaggcag tgttgaaagc cgccgccgaa caccccttga gcgttcaaaa cgaagagcgg
    16741 cagcccgccg cctacatcac cgccttgggc gacaatgcca tcgaaatcac attatgggct
    16801 tgggcaaacg aagcagaccg ctggacgctg caatgcgact tgaacgaaca agtggtcgaa
    16861 aacctccgca aagtcaatat caacatcccg ttcccgcaac gcgacataca catcatcaat
    16921 tcttaaacgc cgtctgaaag gggggtggga aatggacgcg ttgcacacca tcgcccgaaa
    16981 cctgacgaaa aaacgtcaaa ccgtaagctg tgccgaatcc tgcacgggcg gaatgcttgc
    17041 cgccgcattc acaagcgttg caggcagttc gcaatggttc gaccagagtt ttgtaacata
    17101 cagcaacaaa gccaaagaat accgcttggg cgtgttgccc gaaaccctgc tcgaacacgg
    17161 cgcggtcagc cgccaaaccg tctatgagat ggcgcgcggc gcgaaagccg tggctcaggc
    17221 ggattacgcc gtcggtattt ccggcatcgc cggcccgggc ggcggcggcg aaagcaaacc
    17281 cgtcggcacg gtttggttcg ggtttgcctt tccgggcgga agttgcgaag caatgcgccg
    17341 ttttgacggc aaccgcgaat ccgtccgcgc gcaggcggtc gccttcgcgt tggaacggtt
    17401 ggccgggctg gttgaaaacg gcggcgatgc tgtctgaaca aatccccgcc ggataaaaaa
    17461 tgccgtctga aacgttgcag gtttcagacg gcattttgtc gggttaggcg gcggtgcggc
    17521 ttatttcact ttgcccttca acgcgccgta gcctgccgcg tccatttgtt ccagcgggat
    17581 gaatttcaag ctcgcgccgt tgatgcagta gcgcagtccg cctttgtcgc gggggccgtc
    17641 ggggaagacg tgtcccaagt gcgaatcggc ggcgcggctt ctgacttcgg tgcggcgcat
    17701 attgaagctg aaatcatcgt gttcggtaac ggattttgca tcaatcgggc gcgtgaagct
    17761 cggccagccg cagccggaat catatttgtc ggcggagctg aacaggggtt cgccgctgac
    17821 aacgtccaca taaatgccgg gtttgaacaa atggtcgtat tcgtggctga aggcgtattc
    17881 ggtcgcgctg ttttgggtca cttggtattg ctcttcggtc agggtgcgtt tgagttcggc
    17941 gtcactcggt tttttatacg ttgccgcgtc gaagcctttg ccttgcggtg cggctttggt
    18001 tttgcccggc agcggttcgt cggctttgcg gatgtcgatg tggcagtagc cgttggggtt
    18061 tttaatcagg tagtcctgat ggtattcctc ggcgtcgtag aagtttttca gcggttcgtt
    18121 ttcaacaacg aggggcagtt ggtatttttg ctgctcgcgt ttgagggcgg cggcgatgac
    18181 ggctttttcg gcggggtcgg tgtagtacac gccgctgcgg tattgcgtgc cggtgtcgtt
    18241 accctgtttg ttgaggctgg tcggatcaac gacgcggaaa taatattgca ggatgtcgtc
    18301 caggctgagt ttgtcggcat cgtaggtcac tttgacggtc tcggcatggc ccgtatggcg
    18361 gtaggacacg tcttcgtagc tcgggttttc cgtgttgccg ttggcgtagc cggataccgc
    18421 gtcaaccacg ccgtcgatgc gttggaaata ggcttccaag ccccagaagc agccgccggc
    18481 gaggtagatg gtgcgcgtgt tcatgattgc tgaatccttt ttctgagtgt cgggtttgta
    18541 gaacgaatgt ttcaaactgc ccaaatcggc attcgggttg cggattaacg ccaatgcctg
    18601 cgcttcgttg atgctgcctt tgacgatgcg ctgcacgtcg ccgtctttac cgattaacgc
    18661 ccaagaagga taaacgctga tattcaggtt ttgggcgatc gtgccgccgt tgtcggtaac
    18721 gacgggcagc ttggggtagt tcaaaccggc ataccatttt tgaaactcgc cgtctttttt
    18781 ctcgtgcaaa aagccggggg aggcgacggt aatcaggttg gcggagctga attttgcatc
    18841 ttgcgcccat ttctcggcct gtcccaattc ggacaaacat aaaggacacc agctcgccca
    18901 aaatttaatc agcgtcggtt tgtctttttt caaataaaca ctggcggggc ggttgtccgc
    18961 ggtttttaac gtggataaag tgtgcggcac ggtcgcggcc ccggcatcga cgattttggg
    19021 cgaacaagcg cccagcgcaa gcaggcagcc gaacttggcg caaagggaaa agaaagtacg
    19081 gtgtttcatt ttgatgtttc ctgtgtggac ggtttgcatg attagacgtt tgagatgccg
    19141 aaaccttacg gcccggattt tcagacaacc ttgccgcgca aaatacgcta caatacgccc
    19201 tatttcaagt ttctaaaatt aaaaggaaaa ttcaatgttc agcttcttcc gtcgcaagaa
    19261 aaaacaggaa acgccggctc tcgaggaggc ccaagttcag gaaaccgcag caaaagtaga
    19321 atctgaagtt gctcaaatag ttggaaatat taaagaagat gtcgaatctt tagcagaaag
    19381 cgtcaaaggg cgggccgaat ctgccgttga aaccgtcagc ggtgcggttg aacaggtaaa
    19441 ggaaaccgtt gccgagatgc cgtctgaagc aggggaagcg gcggaacgcg ttgaatccgc
    19501 aaaagaagct gttgccgaaa ccgtcggcga ggctgtcggg caagttcaag aagccgttgc
    19561 gacaactgaa gaacacaagc tcggttgggc tgcgcgtttg aaacaaggct tggccaaatc
    19621 acgcgacaaa atggcgaaat cgctggccgg cgtgttcggc ggcggacaaa tcggcgagga
    19681 tttgtacgaa gagctggaaa ccgtgctgat taccggcgat atgggcatgg aggccaccga
    19741 atacctgatg aaagacgtgc gcgaccgcgt cagcctcaaa gggctgaaag acggcaacga
    19801 attgcgcggc gcgttgaaag aagccttgta cgacctgatt aagccgttgg aaaaaccgct
    19861 ggtcttgccc gaaactaaag agcctttcgt gattatgctt gccggtatca acggcgcggg
    19921 caaaaccacg tctatcggca aactcgccaa atatttccaa gcgcagggca aatccgtatt
    19981 gctggcggcg ggcgatacct tccgcgccgc cgcccgtgag cagcttcagg cttggggcgg
    20041 gcgcaacaat gtaaccgtca tttcacaaac cacgggcgat tccgccgccg tgtgcttcga
    20101 tgccgtccaa gccgccaaag cgcgcgggat cgacatcgtg cttgccgaca ccgccggccg
    20161 cctgcccacg cagcttcatt tgatggaaga aatcaaaaaa gtgaagcgcg tgctgcaaaa
    20221 agccattccc ggcgcgccgc acgaaattat cgtcgtactc gatgccaata tcgggcaaaa
    20281 cgccgtcaac caagtcaaag cctttgacga cgcattgggg ctgacggggc ttatcgttac
    20341 caaactcgac ggcacggcaa aaggcggcat cctcgccgcg cttgcttccg accgccccgt
    20401 ccccgtccgc tacatcggcg tgggcgaagg catagacgac ctgcgcccgt ttgacgcgcg
    20461 cgcgtttgtg gacgcactgc tggattgagc cgaaatgccg tccgaaaacg gcagaccgaa
    20521 ccgtcattcc cacggaagtg ggaatttagg acgcggggtt tgggcaaccg ttttatccga
    20581 taagtttccg tgcggacagg tccggattcc cgcctgcgcg ggaatgacgg gttttaagat
    20641 tgcggtgttg tcggaacgca accgaaccgt cattcccacg gaagtgggaa tctaggacgc
    20701 ggggtttggg caactgtttt tatccgataa gtttccgtgc ggacaggtcc ggattcccgc
    20761 ctgcgcggga atgacgggtt tcgagattac ggtattgtcg ggaatgatgg aaaatggcgg
    20821 gaattgtgta aaaaatgccg tctgaaaccg ttggaagcat cgtaaacgtt ggagtcgatg
    20881 aatcggtggg cttcagtccg ccattcccat caatccaaca tttctaccgt tttcatcgaa
    20941 tccatcgaat ccgccccttt cgacaatctg accctatgca accgaaccgt cattcccgcg
    21001 aaagtgggaa tccaggactc aaaatctcaa gaaaccgttt tgcccgataa gttcctgcac
    21061 tgacagatct agattcccgc ctgcgcggga atgacgggtt tcgagattgc ggtgttgtcg
    21121 gacgggtttc gagattacgg tgttgtcggg gatgacggtt cgggtatttt actgcgcccg
    21181 ccccgcgcct gtaaacggcg agcgcatcaa aaatgccgtc tgaaggttca gacggcatcg
    21241 gtgtcgggga atcagcgggc c
//
LOCUS       DAXGCP010000027        21247 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.027, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000027 DAXGCP010000000
VERSION     DAXGCP010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21247
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.027"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            94..339
                     /locus_tag="ACFJCW_000891"
     CDS             94..339
                     /locus_tag="ACFJCW_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC4151075.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
     gene            342..732
                     /locus_tag="ACFJCW_000892"
                     /pseudo
     CDS             342..732
                     /locus_tag="ACFJCW_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(772..2229)
                     /locus_tag="ACFJCW_000893"
     CDS             complement(772..2229)
                     /locus_tag="ACFJCW_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HFC4151076.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHALATL
                     SLGGFSTHDASIGYYNSPLIEAVIIVFTIFGGINFASHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGHYAGFGESLRYTAFNFVSIGLANGLSNTDFAQWPLLIS
                     LWMFFLANILASSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(2244..3074)
                     /locus_tag="ACFJCW_000894"
     CDS             complement(2244..3074)
                     /locus_tag="ACFJCW_000894"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HFC4151077.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLYLLAVGCGEGALKRSDTIEPILKHPDGGKMLDWL
                     RAQPLLIREGGRVMIHAGILPQWRIAKAESLAGEAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     HTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            complement(3151..3540)
                     /locus_tag="ACFJCW_000895"
     CDS             complement(3151..3540)
                     /locus_tag="ACFJCW_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HFC4151078.1"
                     /translation="MSKTVIHTDKAPAAIGAYSQAVRAGGTVYMSGQIPLDPATMTVV
                     GNGDFHTEARQVFQNLQAVAEAAGGSLDDIVKLNAYLTDLGNFAVFNEVMAEFITEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            complement(3687..4214)
                     /gene="nspA"
                     /locus_tag="ACFJCW_000896"
     CDS             complement(3687..4214)
                     /gene="nspA"
                     /locus_tag="ACFJCW_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HFC4151079.1"
                     /translation="MKKALAALIALALPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKQAPSTDFKLYSIGASVIYDFDTQSPVKPYF
                     GARLSLNRASAHLGGSDSFSKTSAGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNNVK
                     NVRSGELSAGVRVKF"
     gene            complement(4598..5773)
                     /gene="hemW"
                     /locus_tag="ACFJCW_000897"
     CDS             complement(4598..5773)
                     /gene="hemW"
                     /locus_tag="ACFJCW_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HFC4151080.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTVEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYSLPNQTVQTALDDVQTAIATDATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGTLEGAGLIHYETSAFAKPTMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQSQPGEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPAAKIMVQIETARQKGLLETDPTVFRPTEKGRLFLNDLLQCFL"
     gene            complement(5830..8301)
                     /gene="ligA"
                     /locus_tag="ACFJCW_000898"
     CDS             complement(5830..8301)
                     /gene="ligA"
                     /locus_tag="ACFJCW_000898"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HFC4151081.1"
                     /translation="MNPTAQRIHELTDLLNRYAYEYYTLDAPSIPDAEYDRLFRELEA
                     LERNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPMLSLTNAFSPQDENGVFDHAEMYA
                     FDQRVRDGLDGGNPEYVIEPKFDGLAISLLYRDGVLVQAATRGDGTTGEDVTRNVKTV
                     SNIPLRLHGENVPELIEVRGEVLMLKADFAGLNKRQAENGQKPFANPRNAAAGSLRQL
                     DSRITAQRKLHFFPYSVARQQGGLIAEEHIQELAYFQALGFSLPNGNFGCFKNIGEVL
                     AFYEHMQQKRPELPYEIDGTVVKVNSLAQQHELGFISRAPRWAVAHKFPAEEALTIVE
                     AIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQDEVSRKDVRVGDTVVVRRAGDV
                     IPEVVRVIFERRPMQETAVAVSDGIGHQQDDLFAETPSAKQTESVPLHKPYRLPARCP
                     ICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFASRKAMDIDGLGEKQIEQLVAQDL
                     VRHFADLYRIDIPTLQKMKETADKGSSENENGDAETVSGDLSKYNTQNGKKQPTKWAQ
                     NILAGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGTLERVRRAPEPVLACLPDI
                     GTVVARSIAHFFAQAEQQAMIDELLAAGVAPQAQAVSLPAAQYAGPQRWITRLPGFKI
                     SENKAQALWELAGQSIEGLQNDKALPADWQAWRSKAQNTALLENLKTFFAQMPSEDEA
                     AQGSDGINKAVAGKTFVLTGTLPTFKRDQAQALIEAAGGKVSGSVSKKTDYVVAGEAA
                     GSKLEKANALGVSVLSEAELLTLLC"
     gene            complement(8435..9721)
                     /locus_tag="ACFJCW_000899"
     CDS             complement(8435..9721)
                     /locus_tag="ACFJCW_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HFC4151082.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVRDQFGHSDKDALLNS
                     KTSHVRDGKPSGGPVMMPKPQPAVKKPAKPQDSAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPVPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQADVFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            complement(9915..10487)
                     /gene="ampD"
                     /locus_tag="ACFJCW_000900"
     CDS             complement(9915..10487)
                     /gene="ampD"
                     /locus_tag="ACFJCW_000900"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HFC4151083.1"
                     /translation="MDNHAGAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLHVSSHFLIARDGETVQFVSCGDMAYH
                     AGASSFRGREKCNAFSIGIELEGCDFEPFAEAQYRSLETLLAALCRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIREKGFPVDRNAV"
     gene            10571..11566
                     /gene="mltG"
                     /locus_tag="ACFJCW_000901"
     CDS             10571..11566
                     /gene="mltG"
                     /locus_tag="ACFJCW_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HFC4151084.1"
                     /translation="MLKKMLKWTAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLHTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIGHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLQIYQTAYKAMQRRLNEAWAGRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            11626..12246
                     /gene="tmk"
                     /locus_tag="ACFJCW_000902"
     CDS             11626..12246
                     /gene="tmk"
                     /locus_tag="ACFJCW_000902"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HFC4151085.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEEVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQAREKDRFEQEQAD
                     FFMRVRGVYLDRAAACPERYAVIDSNRSLDEVRNSIEKVLDGHFGC"
     gene            12468..13748
                     /locus_tag="ACFJCW_000903"
     CDS             12468..13748
                     /locus_tag="ACFJCW_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme"
                     /protein_id="HFC4151086.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATDKDLALAYSPGVA
                     APCMEIHADPQNAYKYTGKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRYTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGRRVLADAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRACVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADLEAYAAKLGEWKL"
     gene            14150..15181
                     /gene="lpxK"
                     /locus_tag="ACFJCW_000904"
     CDS             14150..15181
                     /gene="lpxK"
                     /locus_tag="ACFJCW_000904"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HFC4151087.1"
                     /translation="MPNFFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKWRADF
                     LSGKRQSEKLSVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VYVLNAASRAEDAGDEPLLLFRKTGAPTAVGSSRVEAGRALLAAHPELELIVADDGLQ
                     HYALQRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLESVDAVVVGGRAADGFMPSE
                     HLFGSRIEAGAVYRLNRPSEKLDISTLSGKRVAAVAGIARPQRFFDTLTHMGIRLDQT
                     VALPDHADIFNRDLPPADVVLVTEKDAVKFSDGICTDNVWVLPVCAIIEPDLAEFVLE
                     RLEGVPKAV"
     gene            15387..15920
                     /locus_tag="ACFJCW_000905"
     CDS             15387..15920
                     /locus_tag="ACFJCW_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HFC4151088.1"
                     /translation="MKLKTLLLPFAALALCANAFAAPPGDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAEAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PEFTEELRRIICGGIVD"
     gene            15905..16117
                     /locus_tag="ACFJCW_000906"
                     /pseudo
     CDS             15905..16117
                     /locus_tag="ACFJCW_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            16142..16324
                     /locus_tag="ACFJCW_000907"
     CDS             16142..16324
                     /locus_tag="ACFJCW_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HFC4151089.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARALSEEELKA"
     gene            16321..17082
                     /gene="kdsB"
                     /locus_tag="ACFJCW_000908"
     CDS             16321..17082
                     /gene="kdsB"
                     /locus_tag="ACFJCW_000908"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HFC4151090.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAA
                     RVVVATDHPDIQTACQAHGIEVVMTSNRHESGTTRLAEAAAALKLPPHLIVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAGHELHDFDELMNPNAVKVVLDKNGNAIYFSRAP
                     IPYPRDAMRAGKREMPSETAVLRHIGIYAYRAGFLQRYAEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRVRAVFQTV"
     gene            17105..17620
                     /locus_tag="ACFJCW_000909"
                     /pseudo
     CDS             17105..17620
                     /locus_tag="ACFJCW_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            17777..17869
                     /locus_tag="ACFJCW_000910"
     tRNA            17777..17869
                     /locus_tag="ACFJCW_000910"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:17811..17813,aa:Ser,seq:gct)
     gene            18143..18928
                     /gene="trpA"
                     /locus_tag="ACFJCW_000911"
     CDS             18143..18928
                     /gene="trpA"
                     /locus_tag="ACFJCW_000911"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HFC4151091.1"
                     /translation="MSRIRQAFAALDGGKALIPYIAVGDPDIRTTLALMHGMVASGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PIHKMGYREFAQEAAKAGVDGVLTVDSPIETIGSLYRELKDNEVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLRQYIDIPIGVGFGISNAESA
                     RKIGRVAAAIIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            18965..19837
                     /gene="accD"
                     /locus_tag="ACFJCW_000912"
     CDS             18965..19837
                     /gene="accD"
                     /locus_tag="ACFJCW_000912"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HFC4151092.1"
                     /translation="MSWLDKILPPKIKNRGKDGSSNVPEGLWRKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVVGNVKPTDPLKFKDSKKYPDRLSAA
                     RKLTGEDDALVVMKGMMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGVRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAT"
     gene            complement(19897..20508)
                     /locus_tag="ACFJCW_000913"
     CDS             complement(19897..20508)
                     /locus_tag="ACFJCW_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HFC4151093.1"
                     /translation="MRRAILLILTLTVGTSLAAGFSQKDTPINTRYRETPEEAAAREF
                     KEHTAELPPLPDAHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARSSIGFGNGKLSSYKVFGYGDTVNSRWIQPRNAEWKPIGGTLGRN
                     DALRAVLYQAFCEGGVPADTQGLVQRLKERAGRYAPSMKPHDK"
     gene            20616..20840
                     /locus_tag="ACFJCW_000914"
     CDS             20616..20840
                     /locus_tag="ACFJCW_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HFC4151094.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMRQGEVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDSSEQDGVFTLVVKHK"
     gene            20871..>21247
                     /locus_tag="ACFJCW_000915"
     CDS             20871..>21247
                     /locus_tag="ACFJCW_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151095.1"
                     /translation="MLLLSAFVLAACNAQNRQSGVRHQDFARVAVDLFRSACVLTQGS
                     FEPVSKFAAVGHFVPVGKEDLSRLPPAVAEPDVQALWTLERDGGIYYLSLTRDSCSVK
                     AERADSAALLEHFSGLVRQPPKNA"
BASE COUNT         4627 a         5181 c         6455 g         4984 t
ORIGIN      
        1 cgatgatttt tattagctaa tttaagtaat ttaagcaagt tttttagata ctgaaactgg
       61 taattatgtt tatgtaagca taaggagttc agattgaagg attctacagg gcaaatgagg
      121 ctggcaacca aggatttggc ggaagccatt aaacgaggag aagtacgtag ttctgctttt
      181 acaacaaagc aactaaaggc aatcgaaaaa ggagaatcta aaataccgga ttacacttgg
      241 catcatcatc aagacactgg aaggatgcaa ttgattaatg aagacttgca tcatgatacc
      301 ggccatatcg gttggagagc gatgagtaaa ggaaagtaac tatgtggaaa atcataaaag
      361 aggatagtga tgatttagga tttgcaatta aatgcttatt ctctcaatct attgatttaa
      421 atgaattcaa gttatggatt gaacaagtaa tacgcgatat gcccatcgag gacatccctt
      481 tttatatttt tgacttggcg gatttcaatg ggggaattgg agacattgac aatattgtag
      541 gttttgtttc gagttacagc ctatcaaaat cgaaaaaaaa tgccttgaca ggcattgcct
      601 tcttaagggg gatagatgtc tatagaccct cccgtttcaa aagaaaaagc attaaaagcc
      661 ttagagaaat atcctgaaat ttatcataaa tttaaacggt tctttccttt tgtagagctt
      721 ccgcttcttt aaaggacaat atgccgtctg aaaagttttc agacggcatt tttatttctt
      781 ccagtaggcg ggggtgaaga ggatgaagac ggtgaagatt tccagcctgc ccaagagcat
      841 tgcggtaacg cagatccatt tctgcatcac gtccaaaccg gcgtaattgc cggcgggccc
      901 gacttcgccc agtccggggc cggcgttggt aatgcaggcg atgacggcgg taaaggcggt
      961 ggtaaattcc ataccgctcg ccatcagcag gaagctgaag aggacgacgg tcataaagta
     1021 gatgaagatg aaggacataa cggtcagcgc gaggcggtcg ggtatggctt tgccgctgat
     1081 tttgacggtg cggacggctt tggggtgcag cagcaccatc atttcgcgca ggctgaattt
     1141 gaacaggacg agggcgcgta tggttttgat gccgccgccg gtcgagccgg agctggcgag
     1201 gatgttggcg aggaaaaaca tccacaggga aatcaggagc ggccattgtg cgaagtcggt
     1261 gttggacagc ccgtttgcca atccgatgga gacgaagttg aaggcggtgt agcgcaggga
     1321 ttcgccgaag ccggcgtaat ggccggtgtg ccacaggtac agggcggcgg caaggatgct
     1381 gccggagagc agcagcagca tcgtccggca ttcttcgtct ttccaatagg ttttgaggct
     1441 gcggctgttg agggcggcga aatggctggc aaaattgatg ccgccgaaaa tagtgaaaac
     1501 gatgatgact gcttcgatga ggggggagtt gtaataaccg atgctggcat cgtgggtgga
     1561 aaacccgccc agcgagaggg ttgccagcgc gtgacagacg gcatcgaacc aacccatccc
     1621 ggcaaaatgc aggcaggctg ccgcgaggat ggtgatcagg gtgtagccga accagagttt
     1681 tttcgccact tgggaaatgc gcggcgacat tttgctttct ttgtcaatgc cggggatttc
     1741 ggctttgaat aactgcgtgc cgcctacgcc gagcataggc aggatggcga cggcaaggac
     1801 gatgatgccc atcccgccca gccagttgag catatgccgc caaaagttga cggagggggc
     1861 gagcccgtcg acgtggggga tgacggtcgc gccggtggtg gtcagtcccg acatcgattc
     1921 aaaaaatgcg tcggtaaagc ccatattcgg gaaatacagg tacatcggca tcgcagccat
     1981 agcggcaaac gccagccaca acatcaggac gagggtgaag ccgtcgcgcg ggcgcagttc
     2041 gcgcctgaac cggagggtgg cgagccggac gatgcacgag ccggaaaggg taacggtcgc
     2101 ggtggtggcg aaggcggtgt acgcaccgtc cgaaaaggcg taggagaggg cggcgggtat
     2161 cagcaggata aaggaaaaca gcatacccag tcgggagagg acgtgggcga tgggcaggat
     2221 tttgtgcata gtggggcggt ccgttatttt gcgaagcttt tccagtctat gccgccggcg
     2281 gcttggactt gggtaatttc ttccgtttcg aggttgacgg cggtcagctg cccgccccac
     2341 agcgcgccgg tgtccagcga gatgacgttg tcggcattcg tgtagcccag cgaggaccag
     2401 tgtccgaaga tgatggtatg gtcgaggttt tgccgatcgg gggctttgaa ccacgggcgc
     2461 aggtaaggcg gcattttttt cactgtggat ttgtagtcga aatccagttc gtttttaaag
     2521 gtcagggcgc gcatccgcgt gaaggcgttg acgatgaagc gcaggcgggc atagccttcc
     2581 aaaccttcgt cccatgcggc cggtttgttg ccgtacattt tggagaagaa tttgacgtat
     2641 tttttgccgc gcagttcggc ttcggcttct ccggcgagcg attcggcttt ggctatgcgc
     2701 cattgcggca ggatgccggc gtgtatcatc acgcggccgc cctcgcgtat caaaagcggt
     2761 tgcgcgcgca gccagtcgag catttttccg ccgtcggggt gtttgagtat gggttcgatt
     2821 gtgtcgctgc gtttgagcgc gccttcgccg cagccgacgg cgagcaggta caggtcgtgg
     2881 ttgccgagga cgatttgcac gctgttttcg tgccggatgc agaattgcag cgtttcgagg
     2941 gatttcgggc cgcggttgac gatgtcgccc gtcagccaga gggtgtccgt gccgtggttg
     3001 aagccgattt tgccgagcag cgcggtcagt tcgtcgaaac agccttggat gtcgccgatt
     3061 gcgtaatgtg ccattgcggg tgttgtgaag tgggaaagtg ttgcggttcg gacggcacgg
     3121 ttggaaatct tatgccgtcc gaacgtggaa ttatgcgttc aaaacgagga cggcttccgc
     3181 ttcgacctgc acgcctttgg gcagcgaggc aacgccgacg gcggcgcggg cggggaacgg
     3241 ctcggtgata aattccgcca tcacttcgtt gaagacggca aaattgccca agtcggtcag
     3301 gtaggcgttg agtttgacga tgtcgtccag cgaaccgcct gccgcttcgg cgacggcctg
     3361 caggttttgg aacacttggc gcgcttcggt gtggaaatcg ccgttgccga ccacagtcat
     3421 cgtggcggga tcgagcggaa tctgaccgct catgtaaacg gtgccgccgg cgcgcacggc
     3481 ctggctgtat gcgccgatgg cggcgggggc tttgtcggta tggatgacgg ttttggacat
     3541 ttcggattcc tcaaaaaata gggcggcaga agccgcagcg ttcgggatta tcgtacaaaa
     3601 ccgccggctt gtgtagtttt aggcggtata tgtgccggaa acaaaaaacc gccgaaggct
     3661 cggcggtttg cggaataacg cgtatatcag aatttgacgc gcacgccggc ggacagttcg
     3721 ccggaacgga cgtttttgac attgttgact ttgccgatgt agttgtagcg gtagccggca
     3781 tccagatcga cattgggtgt aacggcatag cttacgcccg ccaatacgcc gaggccggcg
     3841 gaggttttgc tgaagctgtc gctgccgccc aagtgggcgg aagcgcggtt gaggctcaag
     3901 cgcgcgccga aatacggttt gacgggcgat tgggtgtcga agtcgtaaat gacggacgcg
     3961 ccgatgctgt aaagtttgaa atcggtggat ggggcttgtt tatagttttt gtagcgcgtg
     4021 taatcgacgg cgaagcggag gtcgttgatg cggtagcctg cggagatgcg cgggctgaag
     4081 cctttggcag aacctaaaga gcttgaggct ttggcgtgtg cggcatcggc ttggacgtaa
     4141 aagccggatg cgccttccgc cagtgcggcg gccgggagtg cgagggcaat cagtgcggca
     4201 agtgcttttt tcatattttg gttcctttat ggtcagggag aaaaattgtt aataatccgt
     4261 taaagaatcc tgccgtatta tactgaaatt ttctttttgc atcgtaatat tttcaatgcc
     4321 tcaagatacg cggcggcatc acgtggcgga tgggtgaaac ttgcaaacgg tttggaaaaa
     4381 accgcaaagg cggggcggcg gcatttgtca gattgttgca ggcgcaggcg tacggttttt
     4441 tgtgtgcggg gttaccttag gcgtcggaca tttccggcgg cggctgtgcc gtctgaaacg
     4501 cccggcgggg gatgcggctg cgtttcccat cgataggcat atttgccggc cgcgttcggg
     4561 gcgggtttta cccgggcggc cgccgatttg tttgcgctta taaaaaacac tgcaacaaat
     4621 cgtttaaaaa caagcgtcct ttttcggtcg ggcggaatac ggtcgggtcg gtttccagca
     4681 ggcctttttg ccttgccgtt tcgatttgca ccatgatttt ggcggcgggt acgcccgtgc
     4741 gctcctgcaa catcgcggcg ggtacgccgt cggtcaggcg cagggcgttc atcatgaatt
     4801 cgaacggcaa atcttcggcg gcgacggttt tgcgttcgac ggcttcgccc ggctgacttt
     4861 gcattaaggc gaggtagtcg ttggggtggc ggcggcggac ggtgcgctcg atgcggtcgg
     4921 gataggagat tttgccgtgc gcgcccgcgc ctatgcccaa ataatcgccg aactgccagt
     4981 agttcaaatt gtggcggcac tgcatggtgg gtttcgcaaa agccgatgtt tcgtagtgga
     5041 taagacccgc gccttccagt gtgccgtgta ccgcgtcttc gatgtcgagc gccgcttcgt
     5101 cttgcggcaa acctttcggc ggcgtatgac cgaacggcgt gttcggctcc atcgtcagat
     5161 gatatgcgct gatgtgggtt gcgtctgtgg cgatggcggt ttgcacgtcg tccaatgccg
     5221 tctgaacggt ttggttcggc agggagtaca tcaagtcgat attgacttta tcaaataatt
     5281 ttaaggcggt atcgatagcg gttaaggctt ccttgccgtt gtggacgcgc cccagccttg
     5341 agagcatatc gtcgttgaag ctttgtacac caatagaaag ccgcgtgatg cctgcgtctt
     5401 taaatccttg aaacttctcg atttcaactg tacccggatt ggcttccaac gtaatttccg
     5461 cttcgggctg caagcgcaac agcgaacgca cgccgcttaa caaacggtca atcgattccg
     5521 cctgaaacag gctgggcgta ccgccgccga aaaatatcgt ttccaccggc ctgccccaaa
     5581 tattgggcaa ttcaagctgc aagtcggtca gcagcgcgtc gatataggcg gcttcgggca
     5641 atccgttttt caggctgtgg gaattgaagt cgcaatacgg gcattttttg atgcaccacg
     5701 ggatgtggat atagagcgac aggggcggca gggcggtgag tcgggtgcgg tttggaaagg
     5761 aaatggtgtg catggtgcgg ttcggaaaag tggacgatgc cgtctgaagg cggttcggac
     5821 ggcatgggtt cagcagagca gggtaagcag ttcggcttcg ctgaggacgg aaacgcccaa
     5881 ggcattggct ttttccagct tgctgcccgc ggcttctccg gcgacgacgt agtcggtttt
     5941 tttggacacg ctgccggaca ctttgccgcc tgcggcttcg attagggctt gggcttggtc
     6001 gcgtttgaag gtgggcaggg tgccggttaa cacaaaggtt ttgcctgcca cggctttatt
     6061 gatgccgtct gaaccttgcg ccgcctcgtc ttcagacggc atttgcgcga agaaggtttt
     6121 taggttttcg agcagggcgg tgttttgcgc tttgctgcgc cacgcctgcc agtcggcagg
     6181 gagggctttg tcgttttgca gtccttctat actttgtccg gcgagttccc ataaggcttg
     6241 ggctttgttt tcgctgattt tgaaaccggg caggcgggta atccagcgtt gcggcccggc
     6301 atattgtgcg gcaggcaggc tgacggcttg ggcttgcggg gcaacgcctg cggcgagcag
     6361 ctcgtctatc atcgcctgct gttcggcttg ggcgaagaag tgggcaatgg aacgcgccac
     6421 taccgtgccg atgtcgggca ggcaggcgag gacgggttcg ggggcgcggc ggacgcgttc
     6481 caatgtgccg aatgcctgcg ccagcgtttt ggcggtgcgt tcgccgacgt ggcggatgcc
     6541 gagcgcgaac aggaagcggg caagttcggg cgttttgccg gattctatgc ctgcgaggat
     6601 gttttgcgcc cacttggtcg gttgtttttt gccgttttgg gtattgtatt tagacaggtc
     6661 gcctgaaacc gtttctgcgt cgccgttttc gttttcagat gaccctttat ccgccgtttc
     6721 cttcattttt tgcagggtcg gaatatcgat gcggtagagg tcggcgaaat ggcggacgag
     6781 gtcttgggcg accagctgtt cgatttgttt ttcacccaag ccgtcgatgt ccatcgcttt
     6841 gcgcgaggcg aagtggatta agccttgcgc gcgttgtgcc tgacaaagca taccgccgct
     6901 gcatcgggcg acggcttcgc cttcttcgcg ttcgatttcg ctgcggcaga tggggcagcg
     6961 ggccggcagg cggtagggct tatggagcgg aacggattcg gtttgcttgg cggacggtgt
     7021 ttcggcaaac aggtcgtcct gctgatgccc gatgccgtct gaaacggcaa cggcggtttc
     7081 ctgcatcggg cggcgttcga aaatcacgcg cacgacttcg ggaatcacgt ctccggcgcg
     7141 gcgcacgacg acggtatcgc cgacgcgcac gtctttgcgc gatacttcgt cctgattgtg
     7201 cagggtggcg ttggtaacgg ttacgccgcc gacgaatacg ggttgcaggc gggcaaccgg
     7261 cgttaccgcg cccgtcctgc cgatttgcac gtcaatcgct tcgacaatgg tcagggcttc
     7321 ttcggcaggg aatttgtggg caaccgccca gcgcggcgcg cgggagatga agccgagttc
     7381 gtgctgttgc gccaagctgt tgactttgac gaccgtgccg tcgatttcgt agggcagttc
     7441 ggggcgtttt tgctgcatgt gttcgtaaaa cgccaatact tcgccgatat ttttgaaaca
     7501 gccgaaattg ccattgggca gactgaagcc gagtgcttgg aaataggcga gttcttggat
     7561 gtgttcttcc gcaatcaaac cgccttgctg gcgggcgacg gagtagggga aaaagtgcag
     7621 tttgcgttgc gcggtgatgc gcgaatcgag ttggcgcagg ctgccggcgg cggcgttgcg
     7681 cggattggca aagggttttt gcccgttttc ggcttggcgt ttattgagcc cggcaaagtc
     7741 ggctttgagc atcagcactt cgccgcgtac ttcgatgagt tcgggcacgt tttcgccgtg
     7801 cagccgcagg gggatgttgg atacggtttt gacgtttcgg gtaacgtctt cgccggtcgt
     7861 accgtcgccg cgcgttgccg cctgcaccaa tacgccgtcg cggtagagca ggctgatggc
     7921 gaggccgtcg aatttgggtt cgataacgta ttcgggattg ccgccgtcca agccgtcgcg
     7981 cacgcgttgg tcgaaggcgt acatttcggc atggtcgaac acgccgtttt catcttgcgg
     8041 ggaaaaggcg ttggtcagcg acagcatcgg cacttcgtgg cgcacttcgg caaagcctgc
     8101 caaaggctcg ccgccgacgc gctgggtcgg gctgtcgggc agcttgagct cgggatggtt
     8161 tcgttccaac gcttcgagtt cgcggaacag gcggtcgtat tcggcatcgg gtatgctggg
     8221 cgcgtcgagg gtgtagtatt cgtaggcgta gcggttgagg aggtcggtga gttcgtgtat
     8281 gcgttgtgcg gtcgggttca tggattcgta caggttcaga cggcatggac aaatgccgtc
     8341 tgaacggtaa aacgtgttgg aaatggtcgg attttacctg aaaacaaaag gcggatgcac
     8401 cgttgccgat gtatccgcct ttgtgtttgc ggagttatga aaacaggcgc agggcggttt
     8461 tgccgcccgg ttcgataccg actttgagca tctcggactg acgcgccaat acataagtgc
     8521 gtacgtcttt gagccattgg gtcgaaactt cttccatttt gtcgttgacc agattcaggt
     8581 tcaactgacc ggacaggcgt accgccaaat ccataaacaa atcgtcgaag gttttttcgc
     8641 ctgccggaga gtgcgggatg tcgagcagca tactgaagcc tttgtaggac tggttgtcca
     8701 aaagggcatt ggtaaacggc tcgttgttga gcgagcagat ggagaacatg gtcgagcccg
     8761 acgtgtcggt atagtggaac gcgccgtcgt cttccaaaac gaaacccacg cccgttacgg
     8821 cggaacgcag ttctacgccg ctgatgctgg tcggcgaaac caaatggatg gcgatggtct
     8881 ggtcgacgcg cgcgcagaat gcgtccagtg cggaagccac ttcgataaag gcggcaaggt
     8941 cggtgtgcag cgtctgaccg cccatgcttt gtgcgaatac gtccgcctgg cggttgaatg
     9001 cggagagttc ttcctgcgag gcaagtccgt tgcggctgac tgcctggata cccacgataa
     9061 atgcctgata gcggatgccc gggatgggtt cggcaatctg gaaatggtcg tccatggtgc
     9121 agccgacaat ctggtagcgg cagcggttgg aaaggcgcgg cagtgcgtgc agttctttgg
     9181 cttcggtcag cgcgatatag gagatgaagt cgaagcgcac gtcaaaccag ggcagctcga
     9241 ccttcgacag ctctttgagc gtaatcagcg gttttgccgg cgtttgcgga acgggaacgg
     9301 gttttgccgg cgcgtcggca ggtttcggtg cggaatgtcc ggtttggggt tcggagacgg
     9361 tgtgggcgga gttgccgata atgccgcttt cttccaaggc ggtttcgatt tcggttttga
     9421 acggggaggc ttttgcctgt ttctgcttgg cgatgtagac ggcatcctgt tcttgcaggt
     9481 tgcgcatggc ggagtcttgg ggtttggccg gttttttgac cgccggttgg ggtttcggca
     9541 tcatgactgg cccgccggac ggtttgccgt cgcggacatg gctggttttg ctgttgagca
     9601 gggcatcttt gtcggagtgt ccgaactggt cgcgcacttt tttgcggtat tggttttcct
     9661 gatacatatt gtaggcgaca acggcgagga cggcggcgag gaacagtacg atgtaaatca
     9721 tggcaatcac tttaaatttc gggatgcagg atgcgcaaag tgcgggtact gcggttaaat
     9781 cgggcttgcg tttccggcag tctgacggaa cggccggtta taacgtttga attataacga
     9841 aaattgcagg gtctgacagc agtgtgtcga aataagcgga aattttccga aatgccgtct
     9901 gaaatctgtg gttttcagac ggcatttctg tccacgggaa accctttttc ccgtatccgc
     9961 cgccagtcga aaaaatggcc ggggtcggtt ttgcggccgg gtgcgatgtc ttggtgtccc
    10021 gttaccgccg tgatggggta gcggcggcag agggctgcca acagcgtttc gagcgaacgg
    10081 tattgcgctt cggcaaacgg ttcgaaatcg cagccttcca gttcgatgcc gatggaaaac
    10141 gcgttgcact tctcccgccc ccgaaacgag gatgcgccgg cgtggtacgc catgtcgccg
    10201 catgatacga actgcaccgt ttcgccgtcg cgtgcaatca ggaaatggct ggacacgtgc
    10261 aaagtgtgta tcaggctgaa gaacggatgt ccgtcggggt cgagccggtt ggcaaacagc
    10321 ttttccaccg catccgtgcc gtattcgaac ggcggcagcg aaatgttgtg cagcacgatc
    10381 agggaaaccg tttctcccgt ttccctcggg ctgaaattgg gcgacggggt atggcgtatg
    10441 ctttgaagcc agccgttttg ccagtgtgct ccggcgtgat tgtccatgat gttcttcctg
    10501 tccggcgggc aatttgggtt atactgtcgc ccgaatttta agacgtattc cgaatgctgg
    10561 gaatcctacc atgttgaaaa aaatgttgaa atggactgcc gtttttttga ccgtatcggc
    10621 agccgttttc gccgcgctgc tttttgtccc taaagacaac ggcagggcat accgaatcaa
    10681 gattgccaaa aatcagggta tttcgtcggt cggcaggaaa cttgccgaag accgcatcgt
    10741 gttcagcagg catgttttga cggcggcggc ctacgttttg ggtgtgcaca acaggctgca
    10801 tacggggacg tacagactgc cttcggaagt gtctgcttgg gatatcttgc agaaaatgcg
    10861 cggcggcagg ccggattccg ttaccgtgca gattatcgaa ggttcgcgtt tttcgcatat
    10921 gaggaaagtc atcgacgcaa cgcccgacat cggacacgac accaaaggct ggagcaatga
    10981 aaaactgatg gcggaagttg cgcccgatgc cttcagcggc aatcctgaag ggcagttttt
    11041 tcccgacagc tacgaaatcg atgcgggcgg cagcgatttg cagatttacc aaaccgccta
    11101 caaggcgatg caacgccgcc tgaacgaggc atgggcaggc aggcaggacg ggctgcctta
    11161 taaaaaccct tatgaaatgc tgattatggc gagcctgatc gaaaaggaaa cggggcatga
    11221 ggccgaccgc gaccatgtcg cttccgtctt cgtcaaccgc ctgaaaatcg gtatgcgcct
    11281 gcaaaccgac ccgtccgtga tttacggcat gggtgcggca tacaagggca aaatccgtaa
    11341 agccgacctg cgccgcgaca cgccgtacaa cacctatacg cgcggcggcc tgccgccaac
    11401 cccgattgcg ctgcccggca aggcggcact cgatgccgcc gcccacccgt ccggcgaaaa
    11461 atacctgtat ttcgtgtcca aaatggacgg cacgggcttg agccagttca gccatgattt
    11521 gaccgaacac aacgccgccg tccgcaaata tattttgaaa aaataaacca tgccgtctga
    11581 aaagtttgtg ttttcagacg gcataccctt accggaactg caagcatgaa accgcaattc
    11641 atcactttgg acggcataga cggtgccgga aaatccacca accttgccgt catcaaggca
    11701 tggtttgaac ggagggggct gcccgtgctg ttcacgcgcg agccgggcgg aacgccggtc
    11761 ggtgaggcct tgcgcgaaat cctgctcaac cctgaaacca aagccggttt gcgtgcggaa
    11821 acactgatga tgttcgccgc gcgtatgcag cacatcgagg aagtcatcct gcccgcgctt
    11881 tcagacggca tccatgtcgt gtccgaccgt tttaccgatg cgaccttcgc ctatcagggc
    11941 ggcgggcggg ggatgccgtc tgaagacatt gaaattttgg aacattgggt gcagggcggt
    12001 ttgcgccccg atttgaccct gctgttggat gtgccgctgg aagtatcgat ggcgcgtatc
    12061 ggacaggcgc gcgagaaaga ccggttcgag caggagcagg cggatttctt tatgcgtgtg
    12121 cgcggcgttt atctcgaccg agccgccgcc tgtcccgaac ggtacgccgt tatcgacagt
    12181 aaccgcagct tggatgaagt cagaaacagc atagaaaaag tgttggacgg acatttcggc
    12241 tgttgatgcg gcaaatattg aaacaagcgc atccgcccgc gccgaaaacc aaacggcagt
    12301 gccgcaggtg aaaatggcgg tatgcgccaa actttcggca tgatagaatt acgctcggtt
    12361 acaaggcagg atgcgtcggc aatattaacg aaccgaccgt aacatgatga cccgaaagcg
    12421 tttcggacag ttcgattcaa atctttttct cgcaacagga ttgacacatg gaaaactcat
    12481 tgaaagaagc cgccctcaag ttccacgaat tacccgttcc gggcaaaatt tccgttaccc
    12541 cgaccaaatc tctggcgacc gacaaagatt tggcgttggc gtactctccg ggcgtagccg
    12601 ccccctgtat ggaaatccat gccgatccgc aaaatgccta caaatacacc ggcaaaggca
    12661 acttggtcgc cgtcatttcc aacggtacgg ccgttttggg cttgggcgac atcggcgcgc
    12721 tggcgggcaa acccgtgatg gaaggcaaag gcgtattgtt caaaaaattc gccggtgtgg
    12781 acgtgttcga catcgaaatc gacgaaaaag acccgcaaaa actggtggac atcatcgccg
    12841 ctttggagcc gaccttcggc ggcatcaacc tcgaagacat caaagcaccc gagtgtttct
    12901 acatcgaacg cgaattacgc aaacgctgca aaatccccgt atttcatgat gaccagcacg
    12961 gcacggccat cattaccgcc gccgccgtat tgaacgccct gcgttatacc ggccgtaaaa
    13021 tcgaagaagc gactttggtg tgctccggcg caggtgccgc cgcgattgcc tgcctgaacc
    13081 aactgctgga tttgggcttg aaacgtgaaa acgtaaccgt ttgcgactcc aaaggcgtga
    13141 tttaccaaac ccgcgaagac aaagaccgca tggacgaatc caaaaaattc tacgccgttg
    13201 aagacaacgg ccggcgcgta cttgccgatg cggttaaagg caaagacatc ttcttgggcc
    13261 tctccggcgc aaacctgctg acgcctgaaa tgttgaacac gatgaacgaa aaacccatcg
    13321 tgttcgccat ggccaacccg aatccggaaa tcctgccgcc gctggcgaaa gaaacccgtc
    13381 cggacgtggt tatcggtacc ggccgctccg acttcccgaa ccaagtgaac aacgtattgt
    13441 gcttcccgtt catcttccgg ggcgcgttgg atgtcggcgc aaccaccatc aacgaagaaa
    13501 tgaaacgcgc ctgcgtgtat gctttggcag atttggcgat ggaagaagta accgaagaag
    13561 tggttgccgc ttacggtaag aaattcgaat tcggcgcgga atacctgatt cctactccgt
    13621 tcgattcccg cctgctgcct cgcgtcgcta cggctgccgc caaagcagcg atggaaagcg
    13681 gcgtggcaac ccgtccgatt gcagatttgg aagcttacgc tgccaagttg ggcgaatgga
    13741 agctgtaagc cgtttgtggt taaaatgccg tctgaactgt tttcaggcgg cattttgttg
    13801 tcagattgat aaatgaaaga tactggaaaa tgaaagagat gaaacctgtc cgttatcata
    13861 ttggcgatat acccgaaact tcaaaacaaa ccgcccccgg tcatgacgac agggcagtgg
    13921 gtgttgacga tgattgtttt catgattcct ttggtcaata tcgttatgtt ttttgtttgg
    13981 gcgttcggca gaggcaaccc caaccgtgcc aatttctgta aagcactgtt cttatttacc
    14041 ttgttggttc gcttatcggt ttgattttca tattgcttat aggtgggtct gcatcgggta
    14101 cgcattatta atgtgccggc tgattctgct tcgaagattt gtatcgaata tgccaaattt
    14161 ttttaaattt cataccgtta tcgaacggca ttggcaaaaa ccttatccgg ttttgtcttt
    14221 tctgctcaag ccgctttccg ggctgtttgc caaaattgcg gcaaaatggc gggcggattt
    14281 tttatcggga aaacggcaaa gcgaaaagct gtccgtgcct gtggtcgtgg tcggcaacat
    14341 ccacgcgggc gggacgggca aaacgccgat tgccgccgcg ctggtgtcgg gcttgcagga
    14401 aaaaggtgtc aaggtcggca tcatcagccg aggctacggg cgcaagagca aggcggttta
    14461 tgtattgaat gccgcgagcc gtgcggaaga tgcgggcgac gagcctttgc tgctgttccg
    14521 taaaacaggt gcgccgacgg cagtgggcag cagccgtgtg gaggcaggca gggcgttgct
    14581 ggcagcgcat ccggagcttg aattgattgt ggcggacgac ggtttgcagc attacgccct
    14641 gcaacgcgat gtggaaatcg cggtgtttcc ggcggcggat acggggcgta cggatttgga
    14701 cttgctgccc aacggcaatt tgcgcgaacc tttgtcgaga ttggaaagcg tggatgcggt
    14761 ggtggtcggc ggcagggcgg cggatggttt tatgccgtct gaacatttgt tcggcagccg
    14821 tattgaggcg ggtgcggttt accgtttgaa ccgtccgtct gaaaaactgg atatttcgac
    14881 attgtcaggg aagcgcgtcg cagcggttgc cggtatcgcc aggccgcagc gtttcttcga
    14941 tactctgaca cacatgggca tccgccttga ccaaacggtt gctctgcccg accatgccga
    15001 tattttcaat cgggatttgc cgcctgccga tgtggtgctg gtaactgaaa aagatgcggt
    15061 caaattttca gacggcattt gcaccgataa tgtttgggtg ctgccggttt gtgcgataat
    15121 cgaacctgat ttggcggagt ttgtgctgga gcggttggag ggtgtaccga aggccgtctg
    15181 aaagcgcggt ttggacgaag tgataacgga ctggaataag aacgccctac gccgtcattc
    15241 ccgcgcaggc gggaatctaa gtctcgaatt ttcaggaatg cctaggagac ttcagaaatc
    15301 ccaaatctcc ggatttccac ttgggcagga atgagaaagc cggttgtatt ttttatctgc
    15361 attaatcatt cgttaaagga gtggatatga agctgaaaac cttgttattg cccttcgccg
    15421 cactggcatt gtgtgccaac gcatttgccg ccccgcccgg cgacgcgtcg ttggcacgtt
    15481 ggctggatac gcagaatttc gaccgggata tagaaaaaaa tatgattgaa ggctttaatg
    15541 ccggatttaa accgtatgcg gacaaagccc ttgccgaaat gccggaagcg aaaaaagatc
    15601 aggcggcaga agcctttaat cgttatcgtg agaatgtttt gaaagatttg attacgcccg
    15661 aagtgaaaca ggctgtccgc aataccttat tgaagaatgc ccgtgaaata tacacgcaag
    15721 aagaaattga cggcatgatt gccttttacg gttcgcctgt cggtcagtcc gtcgttgcca
    15781 aaaatccgcg cttaatcaag aaatcgatga gtgaaatagc ggtatcttgg actgcattgt
    15841 cagggaaaat cgcgcgacat catctgcccg agtttacgga agagttacgg cgcatcatct
    15901 gcggcggtat agtggattaa atttaaatca ggacaaggcg acgaagccgc agaccgtaca
    15961 aatagtacgg caaggcgagg caacgccgta ccggtttaaa tttaatccac tataaaaatc
    16021 ccgatgcggg ctgcaagcag gccggacagc ttgggaaaag gtatcagaag taaataatag
    16081 ccgcctgaaa tattgcggag ggcgtctgat tgattaaacc atcaaacccg aaagcaacct
    16141 tatggaaaaa aaattcttag acatcctcgt ctgccccgtt accaaaggca ggctggaata
    16201 tcatcaggac aaacaggaat tgtggagccg tcaggcgaag cttgcctatc cgattaaaga
    16261 cggcattccc tatatgctgg aaaacgaagc acgagcgttg agcgaagagg aactcaaagc
    16321 atgaccgaat tcgtcgtatt gattccggcg cggctggatt cgtcgcgcct gcccggaaaa
    16381 gccttggcgg acattcacgg caaaccgatg gtcgtgcgcg ttgccgaaca ggcggcaaaa
    16441 agcaaagccg cgcgcgtcgt cgtcgccacc gatcatcccg acattcagac ggcctgtcag
    16501 gcgcacggta tcgaagtcgt catgacttca aaccggcacg aaagcggcac gacgcgcctt
    16561 gccgaagccg ccgccgcgct gaagctgccg ccgcatttga ttgttgtgaa cgtacagggc
    16621 gacgagccgc tgattgcccc cgaactcatc gaccgcaccg ccgaagtact cgtcgaaaac
    16681 aacgtccaaa tggcgaccgc cggccacgaa ttgcacgatt tcgacgaatt gatgaatccc
    16741 aatgccgtca aagtcgtcct cgacaaaaac ggcaacgcca tctacttcag ccgtgccccg
    16801 attccctatc cgcgcgatgc gatgcgtgcc ggaaaacgcg aaatgccgtc tgaaaccgcc
    16861 gtcctacgcc atatcggcat ttacgcctac cgcgccggct tcctgcaacg ctatgccgaa
    16921 atgagcgtct cgccgctgga aaccatcgaa tcgctggaac aactgcgcgt cctgtggcac
    16981 ggctacccca tcgccgtcga aaccgccaaa gaagcccccg ccgccggtgt ggatacgcag
    17041 gaagatttgg acagggttcg cgctgtattt cagaccgtat aaaacaggtt caaagggaaa
    17101 agatatgcag caacatattg aaaagtggca acacttgagc cgtgaagaac agaaaatcct
    17161 tgccgaagta tggggtctcg tgcaaaacga tgatcaggag gttcactatg aaatgctcaa
    17221 attgaacgca cctgatgaag tcagcggtga attttggttc agaatggcag aaacactcag
    17281 caccctgccg cccaatcgtt ccctcgacct tagaatgaac ggcggcaggc tgtcgaccgc
    17341 cgtatccatc ctttccgtca tgattgaaga caatcccgac ataccgcagc tttgggcgta
    17401 aaaaattacc gccctcaatt atttggtaca cggacacaaa gcccgtgccg acggtttggt
    17461 acaacagccc gacaaagcgg cagaagccaa cgaagaggaa tacctgacca aagccctgtc
    17521 gcaaaacctg ctgtcaacat tggatgcctc acttgcacgt tttcctgaag acgcgtggtt
    17581 tcaggaaatc aaacaggatg cacaaaagca ttttgcttga ggacgtggcg gtcaggaata
    17641 tttccattca ggaagaaaag aagtgcctaa ttgggtataa tcagggtaaa tcttatttta
    17701 tttcagaaga ttaatatttg ttttccgttt ttccttgacg gtatcggaaa agttgattat
    17761 agttacagct tccttaggag taatggctga gaggctgaag gcacttccct gctaaggaag
    17821 catgtgggat caacctgcat cgagggttcg aatccctctt actccgccag ataaaaaaat
    17881 agacgctgtg ttttacagcg tctatttttt tatgcaattt tatagcgggt tggcgcaaac
    17941 ccggtatggt attgccctgt cttgattctg aattttgtta atccgagatg tttgccgttt
    18001 atttttgcct cgttcaaacg gcggctctga tctgcgcggt ttctgtttgc cgtattcgcc
    18061 tacccgtacc gcaaatgtta tactgggaaa aattcaccga ttgtatttta cggcgtattt
    18121 gccgatagga tggaagagac aaatgagcag aatccggcag gcttttgccg ctttggatgg
    18181 cggaaaggca ttgattccct atattgcggt gggcgacccc gatattcgga caactttggc
    18241 attgatgcac ggcatggttg caagcggtgc ggatattttg gagttgggcg tgccgttttc
    18301 cgatccgatg gcggacgggc cggttattca gcgtgcggcg gagcgggcgt tggcaaacgg
    18361 gatttcgctg cgcgatgtct tggatgtcgt cagaaaattc cgtgaaaccg acacgcaaac
    18421 gccggttgtt ttgatgggat atttgaatcc catacataag atgggttatc gggagtttgc
    18481 tcaggaagcc gcaaaggcgg gggtggacgg cgtgttgacg gtggattccc ccatcgaaac
    18541 catcggttct ttatatcgcg agctgaagga taacgaggtc gactgtattt tcctgattgc
    18601 gccgacgacg acggaagacc gtattaaaac cattgccgag ctggcaggcg gatttgtcta
    18661 ttatgtttcg ctcaagggcg taacgggcgc ggcaagtttg gatacggatg aggtttcgcg
    18721 taaaatagag tatttgcgtc agtatatcga tattcccatc ggtgtcggtt tcggcatcag
    18781 caatgcggaa agcgcgcgca aaatcggccg ggttgccgcc gcgatcattg tcggcagccg
    18841 gattgtgaaa gagattgaaa acaatgcggg caacgaggct gccgccgtcg gtgctttggt
    18901 caaagagtta aaggatgccg tgcgctgatt ctgtcgcgca ttctaaatgt tttaggagtt
    18961 gtccatgagc tggttagata aaatcctgcc acccaaaatc aagaatcgtg ggaaagacgg
    19021 ttcttccaat gttcccgagg gtttgtggcg caaatgcccg tcttgttcgg caaccgttta
    19081 ttcgaccgag ttgcagcaga acaatcaggt ctgcccgaaa tgcaaccacc acaatccgtt
    19141 atcggcgcgc cagcgtttga acctgctttt ggatgaggaa ggcagggagg aagttgtggg
    19201 taatgtcaaa ccgaccgatc ctttgaagtt taaagacagc aaaaaatatc cggaccgttt
    19261 gagtgcggca cgcaagctga ccggggaaga tgacgcgctg gtggtgatga aggggatgat
    19321 gaacggtctg cccgtcgtcg ttgccgcgtt tgaattccgc tttatcggcg gttcgatggg
    19381 ttcggttgtg ggcgagcgtt tcgtacaggg tgtccgccgt gcggttgccg ataattgtcc
    19441 gtttgtctgt gtggcggctt ccggcggcgc gcgtatgcag gagggtgtaa actcgctgat
    19501 gcagatgacg aaaaccagtg ccgcgctgca tttgctgacg gaaaaacgcc tgccgtttat
    19561 atcggtgttg accgatccga ctatgggcgg cgtatctgcc agcttcgcat ttttaggcga
    19621 tgtcgtgctt gccgaaccga acgcgctgat cggttttgcc ggtccgcgcg tgattgagca
    19681 gacggtgcgc gaaacgctgc cggaaggctt ccaacgcgcc gagtttctgc tggaaaaagg
    19741 cgcgatcgac cagattgtcg accgccgcga tatgaagcgg cgcatcagtg atttgattac
    19801 gctgttgtgc cgtcaggaca aagtttccgc cacctgatgg ctgatgaatc gaatgccgtc
    19861 tgaaaccgat gtttcagacg gcatttttgt gtctggttat ttgtcgtgcg gcttcatcga
    19921 cggggcatag cgtccggcac gttctttcag gcgttgtacc aaaccttgcg tgtcggcggg
    19981 tacgccgccc tcgcagaatg cctgatacag gacggcgcgc aatgcgtcgt tgcgcccaag
    20041 tgtgccgcct atcggtttcc attcggcgtt tcggggctgt atccagcggc tgttgaccgt
    20101 atcgccgtat ccgaatactt tgtaggagga aagtttgccg ttgccgaacc cgatggagga
    20161 gcgggcgcag aatatgcctt cggcagtcag gttgtcgtag cctttgtcgg agcggatatt
    20221 gagaatgtag cggatgctgc cgtcgggcgc gggcataatt tgcaggctgt cgagcaggat
    20281 tttcggctgt ttgccgtaat tttcatccac ataaatgtca aaccagccgt ccgagtgcgc
    20341 atcgggcaga ggcggcagtt cggcggtatg ttctttaaat tcgcgggcgg cggcttcttc
    20401 gggcgtttcg cggtagcggg tgttgatcgg cgtgtctttt tggctgaagc cggcggcaag
    20461 ggacgtgccg acagtcaggg tcagaatcag aaggatggcg cggcgcataa gtttctccaa
    20521 attgaaaacg gctttatttt atggtttggc gggaagggct gcaagcaatc ggggtataat
    20581 ctgacctgat tttcatttta aagcggtgtc gaaccatgaa cagcgaaact ttagacgtaa
    20641 ccggattgaa atgtcccctg ccgattttgc gggcaaaaaa ggctttggcg caaatgcggc
    20701 agggcgaggt attgaccgtt ctggcgaccg acggcggcgc gccgggggac tttgaggctt
    20761 tttgccgcca aaccggtcat gtgctgttgg attcttccga acaggacggc gtgttcacac
    20821 tggtcgtcaa gcacaaataa atgccgtctg aaatgcggat gtcctgattg atgttattgc
    20881 tgtcggcatt tgtgcttgct gcgtgtaatg cccaaaaccg gcaatccggt gtacggcatc
    20941 aggattttgc acgcgtagcc gtcgatttgt ttcggagtgc ctgcgtcctg actcaaggta
    21001 gtttcgaacc ggtttccaag tttgccgctg tcggacattt tgtccctgtc ggaaaggaag
    21061 acctgtcccg tctgccgccc gctgttgcag aacccgatgt acaggcgttg tggacgcttg
    21121 aacgcgatgg cggcatttat tatttgagcc tgacgcgcga cagttgcagt gtgaaagccg
    21181 agcgggcaga cagtgccgcg cttttggaac atttctcagg gcttgtccga cagccgccga
    21241 aaaatgc
//
LOCUS       DAXGCP010000028        21240 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.028, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000028 DAXGCP010000000
VERSION     DAXGCP010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21240
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.028"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            382..749
                     /locus_tag="ACFJCW_000916"
                     /pseudo
     CDS             382..749
                     /locus_tag="ACFJCW_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
     gene            746..1057
                     /locus_tag="ACFJCW_000917"
     CDS             746..1057
                     /locus_tag="ACFJCW_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC4151096.1"
                     /translation="MKYKSGIFAAIHETMQGLHDIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPGGAALKLLTIVKNKGIEAI
                     A"
     gene            1063..1275
                     /locus_tag="ACFJCW_000918"
     CDS             1063..1275
                     /locus_tag="ACFJCW_000918"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151097.1"
                     /translation="MANGKISKFTYRRAAEYACQDRQDRRTEYQGVAAQMPDRIKPSR
                     NGGGTDGIARQQGTGIFCARCRGDWI"
     gene            complement(1783..2338)
                     /locus_tag="ACFJCW_000919"
                     /pseudo
     CDS             complement(1783..2338)
                     /locus_tag="ACFJCW_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235198.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2335..3142)
                     /locus_tag="ACFJCW_000920"
                     /pseudo
     CDS             complement(2335..3142)
                     /locus_tag="ACFJCW_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751586.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            complement(3135..3305)
                     /locus_tag="ACFJCW_000921"
                     /pseudo
     CDS             complement(3135..3305)
                     /locus_tag="ACFJCW_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258361.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
     gene            complement(3272..4063)
                     /locus_tag="ACFJCW_000922"
     CDS             complement(3272..4063)
                     /locus_tag="ACFJCW_000922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DpnI domain-containing protein"
                     /protein_id="HFC4151098.1"
                     /translation="MNLFFDTQLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCPNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKDWLLAVMKCIDQLTEEFTLSQMYEFENKLSIQ
                     FPQNNHIKDKIRQQLQILRDQNMIEFIGRGLYKKIDKLHPTPKAF"
     gene            complement(4292..6922)
                     /gene="leuS"
                     /locus_tag="ACFJCW_000923"
     CDS             complement(4292..6922)
                     /gene="leuS"
                     /locus_tag="ACFJCW_000923"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HFC4151099.1"
                     /translation="MQEHYQPAAIEPAAQKKWDDARISNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAVDWEREVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQAFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFAAKYNLPKKQVIAVGDNAFDANRWQEWYGNKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     KCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETSCPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVSAESAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPVSAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGSEQGRAVAQEVLEAAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALANEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            7189..7705
                     /locus_tag="ACFJCW_000924"
                     /pseudo
     CDS             7189..7705
                     /locus_tag="ACFJCW_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
     gene            7712..8155
                     /locus_tag="ACFJCW_000925"
     CDS             7712..8155
                     /locus_tag="ACFJCW_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HFC4151100.1"
                     /translation="MPPRLLSGILCCLLTTAPVFAQGQPDAVSAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGTATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            8324..10381
                     /gene="ppk1"
                     /locus_tag="ACFJCW_000926"
     CDS             8324..10381
                     /gene="ppk1"
                     /locus_tag="ACFJCW_000926"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HFC4151101.1"
                     /translation="MTEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRPDNGKTPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGTQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLTVDEEDVQNLRAAIQNELHDREYGDGVRLEVADTCPAYIRD
                     FLLAQFRLTDAELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKNSPIFD
                     LVRQSPILLHHPYQSFDPVVDMIREAAADPAVLAVKMTIYRTGTRSELVPALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKVHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGLITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIARETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     ATPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWDL
                     LRG"
     gene            complement(10530..11633)
                     /gene="dnaN"
                     /locus_tag="ACFJCW_000927"
     CDS             complement(10530..11633)
                     /gene="dnaN"
                     /locus_tag="ACFJCW_000927"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HFC4151102.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGRGGQTK
                     LLATDLEIQIDTAGPEGGAGDFRITTNAKKFQDILRALPAGALVSLDWDDNRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLGQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQPGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
     gene            complement(11713..13269)
                     /gene="dnaA"
                     /locus_tag="ACFJCW_000928"
     CDS             complement(11713..13269)
                     /gene="dnaA"
                     /locus_tag="ACFJCW_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HFC4151103.1"
                     /translation="MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRPAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEKPVKPAASKTAADILAERMKNLPHEPRQAAGPASRPESAA
                     VAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            13561..13695
                     /gene="rpmH"
                     /locus_tag="ACFJCW_000929"
     CDS             13561..13695
                     /gene="rpmH"
                     /locus_tag="ACFJCW_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HFC4151104.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            13698..14063
                     /gene="rnpA"
                     /locus_tag="ACFJCW_000930"
     CDS             13698..14063
                     /gene="rnpA"
                     /locus_tag="ACFJCW_000930"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HFC4151105.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCGKQV"
     gene            14128..14349
                     /gene="yidD"
                     /locus_tag="ACFJCW_000931"
     CDS             14128..14349
                     /gene="yidD"
                     /locus_tag="ACFJCW_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HFC4151106.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGLRLAIKRIARCHPFGGHGHDPVP"
     gene            14522..16159
                     /gene="yidC"
                     /locus_tag="ACFJCW_000932"
     CDS             14522..16159
                     /gene="yidC"
                     /locus_tag="ACFJCW_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HFC4151107.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQAAQKQAATA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFVLFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYTLNGDTVEVRLSAPETNGLKIDKVYTFTKD
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRSDKLYSASVSVPLAAIQAGAKAETAVNLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIVVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQT
                     IKEKYGDDRMAQQQAMMQLYKDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(16240..16950)
                     /locus_tag="ACFJCW_000933"
     CDS             complement(16240..16950)
                     /locus_tag="ACFJCW_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC4151108.1"
                     /translation="MSPVLYLIPTPLGTPDTPCLLQHEQRAVVGLTDFVVEAEKTARA
                     HLKHLGITTPIRELNLQTLNEHTDLKTLPELLKPLQEGRSMGIVSEAGCPAVADPGAN
                     LVALAHKHGFEVRPLVGPSSLLLALMASGANGQNFAFNGYLPSEKNERIQSLNALEQR
                     SRQCGETQIFIETPYRNDALLADAVENLHPETRLCTATDLTLPTQLVVSKTVADWRRM
                     KEMPNLKKRPTIFVMYAG"
     gene            complement(17012..17602)
                     /locus_tag="ACFJCW_000934"
     CDS             complement(17012..17602)
                     /locus_tag="ACFJCW_000934"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HFC4151109.1"
                     /translation="MGLELPLVLGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPGALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMHRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCAAKSEGL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            17750..18250
                     /locus_tag="ACFJCW_000935"
     CDS             17750..18250
                     /locus_tag="ACFJCW_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HFC4151110.1"
                     /translation="MSDPNLIDPEIFAAERQNLQGSFLLEELDERVSLHDYPADRRTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIILFSDEESLDES
                     MLADEELEGILIEKELDVRALVEDQILMSLPFSPRHGHCGNTLPESANQDKPNPFAVL
                     AGLKSS"
     gene            18284..18463
                     /gene="rpmF"
                     /locus_tag="ACFJCW_000936"
     CDS             18284..18463
                     /gene="rpmF"
                     /locus_tag="ACFJCW_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HFC4151111.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALFVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            18638..19165
                     /locus_tag="ACFJCW_000937"
     CDS             18638..19165
                     /locus_tag="ACFJCW_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HFC4151112.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNAGVKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDSEGQVTEEVKKVQWLDPVPEVLRGKNVLVVDEVDDS
                     RVTMEFCLKELLKEDFDTVGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            19255..20301
                     /gene="plsX"
                     /locus_tag="ACFJCW_000938"
     CDS             19255..20301
                     /gene="plsX"
                     /locus_tag="ACFJCW_000938"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HFC4151113.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALNAAGAPMERIDICHTTQVVGMDESPQSALKNKKYSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDKTGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALEAAQNETAASL"
     gene            20439..20690
                     /locus_tag="ACFJCW_000939"
     CDS             20439..20690
                     /locus_tag="ACFJCW_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC4151114.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFDILCTYIEDFDIRLTEQESREISFINKEFEIESTSD"
     gene            20717..20935
                     /locus_tag="ACFJCW_000940"
                     /pseudo
     CDS             20717..20935
                     /locus_tag="ACFJCW_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218360.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5260 a         5965 c         5203 g         4812 t
ORIGIN      
        1 aataagaaaa agataaaaaa ttggtaacaa atgcggtaac aaatggtaac gaatcggtaa
       61 caacttttgg ggttttccgg ttttttaccg tcttggcagt gggagcgtag cggaatgaaa
      121 agccaaaacg cacggaaccg cgcctatttt gagcaggaat ggcggttaaa ccggttggtt
      181 atattgcggg gcataggaag acagcgaaac gcgctaaaaa cgcaatttga gccattaaaa
      241 gcgattgatt aaaaaataat caaattagcc gccggtgttt caggcggcat aaacggagaa
      301 attgcagggt ataaaaaggc ggcttgccgt gttgcctgtc tttggtataa tccccagtat
      361 cactaagtaa acggttgcac aatgcggata ttcaaaaacc aatggatagt gaaatttgcc
      421 aagaagcaca aaatcagtga ttcagagctg atagaggcgg tagagcgggc agataacggg
      481 ctgatagatg cagatttggg cggcgcgtga ttaagcagcg catagcaagg caagggcaag
      541 gcagaagcgg cggttatcgc agtctgatat ttttcaggca tggagaacgg gcgtttttca
      601 tgaccgcctt tgccaagaac gaccgcgaaa acatcactga taaagaactt acagaattaa
      661 agaaaaccgc cgccatcatc ttggcaatga cagaaaccga catagagcaa gccaagtcaa
      721 acggcacttt cacggagata cagccatgaa atataaaagc gggattttcg cagcaataca
      781 cgaaaccatg cagggattgc acgacatcgg cgcaatcgac aaaaagacta tgcgcggctt
      841 tgacaagtcc tgcctgaccg aaatcaagcc gttgagcggc ggggacatca aggcaatcag
      901 ggagaaggag gcactatcgc aagccgcttt cgccatctat ctcaacgtgg ggaaaaatca
      961 cgtttcggct tgggagcggg gcgttaaaaa gcccggcggc gcagcgttga agctgctgac
     1021 catcgtcaaa aacaagggca tcgaagccat tgcgtagccg acttggcaaa cggcaaaatc
     1081 agcaagttca catatagacg cgctgctgaa tatgcctgcc aagacaggca agaccgccga
     1141 actgaatatc agggcgtagc cgcacaaatg cccgaccgca tcaaaccaag ccgaaacggc
     1201 ggcggtacag acggcatagc ccgacagcaa ggcacgggga ttttttgcgc ccgttgcagg
     1261 ggggattgga tttaagcggc acgggcttga aggcaaaacg ggcggggcgc agaactgttt
     1321 aaatgccgtc tgaatctcaa accatttcag acggcatttt gaaacaacgg ctcaaattct
     1381 cgatcccctt cccttaacgc cgacgttttt tattaacgcg ccccttattt ctgacacttt
     1441 gctcataaac cggcataacg gtcggcaaca accgttttag attttctata cgggcattgt
     1501 ttacagcatc agcataagac accgtactct ggaataccgc ctaaaccctg cggatagttt
     1561 tggatgtggt atcgacattg tcggcagact tgtctaactc gaccgttttc aaataatctt
     1621 tggcagatgc tgcattcagt gtcgcggaat ccgcgtattt tgaacaaaag gtcgggctac
     1681 tttatcacaa tagcagaaag atggaaaacg gcggggattg gtgaaaggtc gtctgaaatg
     1741 atattcagac gaccttgaac ggttgtgttt taaatatggt atttattcat ttgtttcacc
     1801 atcaggcagt ccaaaccacc ttaagggaat cgtgttaaat tggtaatggc agttaacact
     1861 gataatataa tctaaaacat ctttaatatt ccggttttgt aaaccaatca ttcaaaacat
     1921 agacatatcc aacccgccaa cctaaagagt gaactaactt tgtatattgt tttctcttaa
     1981 aatcgcaagt ttgtaatttc tcatctactg aaccgggagt ttgttggaat ttgatctcaa
     2041 taataaataa ggtatcacgg atgatgataa ataagccatt atcgggcagt aatcttttag
     2101 acagatggtc tttccaatta atattgtatt ccagtctttc caaaaatcgg taaaactcat
     2161 attttttgaa acaataagcc ttcaattctc cattaaacca aacttcataa cccgcattat
     2221 catctgtttt tcttaagtcg tacccgggaa tttcttcaaa caactttcgt aagtctgtac
     2281 gttcttcgaa tctgagtcct gtttgtgtcc ttgcaccgcc gattccgcca ataatcattt
     2341 ttctaacctt ttctttgcta attcaaaaaa tcttcttcca gttcgcaacc gcaaaatctc
     2401 cgaccatgtt ttaaggcggc aacgcctgtt gtgccgctgc ccataaaagg gtcaaaaatt
     2461 aaatctccga tatttgaagc cgatagtatg cagcgttcaa gtaaggagag tggtttttgt
     2521 gtcggatgtt tgccgaatgt tttttcggtt ttatttggtg gaggaaatgt ccaaacacat
     2581 ttcatctgtt tgccattatt ttgtgctttc atcatttcat aatgaaacgt atgtttggct
     2641 tttttatttt tctttgccca taagattgtt tctgtcgaat gggtaaagaa acggcaggac
     2701 aaattagggg gaggattggg tttttcccaa gtaatattgt tcaaaatatg gtagccgacg
     2761 gtttgcatca ggtagccgat taaatagata ttatgaaatg tgccgcaaac ccaaattgtg
     2821 ccgtttggtt ttaataaggc gtaacacagt cggagccatt cttcgtaaaa ttccaaatct
     2881 gccgccattc ctttggattt atcccagttg cccttattga cggaaaccat ttgcccgttt
     2941 tgacaactga aaccgtcatt ggaaagaaag taaggcgggt ctgcgaaaat catatcaaaa
     3001 cagccgtttg gatgtttttc caatatcttc cgcatgacgt taagggaatt ttcgttgtag
     3061 aggacaaggt cgtctgaaac gattttttca aacgactttg ataaatggca gcttcttcag
     3121 ccggtttgtc aaaatcaatc ataaattgcc aataattctc cgactttttt acgactgctg
     3181 ccctttgcgg caatattgcg ttgtacttca accgttttta gaatggcaga agaataaata
     3241 tttctcgtaa attcagtatc atgatttgaa atcaaaacgc cttgggagtt gggtgcaatt
     3301 tgtcgatttt tttgtaaagt ccgcgaccaa tgaattcgat catattttga tcacgcaaaa
     3361 tttgcaactg ttggcggatt ttgtctttga tatggttgtt ttggggaaat tggatggata
     3421 gtttgttttc aaattcatac atttgcgaca atgtgaattc ttcggtgagt tggtcgatac
     3481 atttcataac agccaaaagc cagtctttgc gctccgcatt ttggttgcgt aaaaacaggt
     3541 tggattgcca ttttttcaga acggtttcgg gttcgataat gcgggaatcg tctattaaga
     3601 atatttttcc gctttcaggc aaaggggcga gattgatgga acacataatg tggtgcggtc
     3661 ggtttttaat gcctttattt ctgggaataa tcatatccgg cgtgatgaaa tgtttgggta
     3721 caagcaccaa ttgccgtatg gagtaatccg cttttttata tgcaagaaag aaaaagttgg
     3781 ggttggtatc tgaccggatg cgctccaaca tagtgcgata tgcaccgtca ggcacgctgt
     3841 tgcctatggt tttttgattt ttactcttta attcatattg ctcgtggcaa tttgggcaaa
     3901 agaggtctgc aacaggtttg ttattggcaa atctctgcat cggcttgctt ccgcaacagg
     3961 ggcaatagcc gtttttttcc agccaagcct cgctcattac acggattttg tgggttgctt
     4021 tattttgttg ctttcccaat tgggtatcga aaaataaatt catattttgg attttgagat
     4081 taatttttag tagattaaca aaaatcagga caaggagacg aagccgcaga cagcagggca
     4141 aggcggggca acgccgtacc ggtttaaagt taatccgcta tatttgaggt ctgtcttgca
     4201 gacaacccaa tctgccttaa aaaggccgtc tgaaaccctg tttccaagtt tcagacggcc
     4261 tttatccgta tggctaaacc ttaaaagcgg tttagacgac gatgttcacc agtctgcccg
     4321 gtacgacgat gattttcttc gcaggcttgc cttccatgaa tttcactgcg ccttcgttgg
     4381 cgagtgcggc ggcttcgagg tcggctttgg aggcgtcggc ggcgacggtg attttgccgc
     4441 gcagtttgcc gttgacttga accatcactt cgatttcgga tttgaccagg gcggcttcgt
     4501 cgactgtcgg ccagcctgct tcccacagtt tcgcgccgtt caattcgctc cacagggttt
     4561 cgcagatgtg cggcacgatg ggccacaaca ggcgtacggc ggcttccaat acttcttggg
     4621 cgacggcgcg gccttgttcg ctgccggtgt cggttttgtc gtattggttg agcagttcca
     4681 tcacggcggc gatggcggtg ttgaactgct ggcggcggcc gtagtcgtcg ctgactttgg
     4741 cggtggtgga atgcagtttg tggcgcaggt ctttgagttc tttagacaaa ccgtcttggt
     4801 tgcctgcaaa tgctttgacc gcgccgcctt gcttcaggta ttcgtaaacg gtacgccaca
     4861 gacggcgcag gaagcggtgt gcaccttcga cgccgctgtc gctccattcg agggactgtt
     4921 cgggcggtgc ggcgaacatc atgaacaggc gggcggtgtc cgcgccgtag gcgttaatca
     4981 gttcttgcgg atcgacgccg ttgtttttgg atttggacat tttttccgtg ccgctgatga
     5041 cgacgggcag tccgtcggct ttgaggacgg cggaaacggg gcggcctttg tcatcgaaag
     5101 tcagctcgac atcggcgggg ttgatccagt ctttgccgcc tttgtcgttt tcgcggtagt
     5161 aggtttcgca gacgaccata ccttgcgtga gcaggcgttc aaacggttcg tcaacattga
     5221 ccaaaccttc gtcgcgcatc agtttggtga agaagcgcgc gtacaggagg tgcaaaatcg
     5281 cgtgttcgat gccgccgatg tattggtcga ccgcgcccca gtatttcgcg gattctgccg
     5341 ataccatgcc gtctgaaaac ttgggcgaca tatagcggaa gaagtaccag ctcgactcca
     5401 tgaaggtgtc catggtgtcg gtttcgcgtt tcgccgcgcc gccgcagcac gggcaggaag
     5461 tttcgtaaaa ctcgggcatt tttgccagcg gcgaacccat accgtcgggt acgacgtttt
     5521 caggcaggac gacgggcagt tggtcggcag ggacgggaac gtctccgcat ttttcgcaat
     5581 ggacgatggg aatcgggcag ccccagtagc gttggcgcga aatgccccag tcgcgcaggc
     5641 ggtattgggt tttcggttcg cccgcacctt ggctttgcag cttggcggca acggcatcaa
     5701 atgccgtctg aaaatccaag ccgtccaagt cgccgctgtt gaccaatacg ccgttttctt
     5761 tgttgccgta ccattcttgc catcggtttg cgtcgaatgc gttgtcgccg acggcaatga
     5821 cttgtttttt cggcagattg tatttggcgg caaactcgaa atcgcgttcg tcgtgcgccg
     5881 gaacagccat caccgcgccg tcgccgtagc cccacaagac atagttggca atccacactt
     5941 ccagcttgtc gccgttgagc gggttgacga cgtagcggcc ggtcggcacg ccttttttct
     6001 ccatcgtcgc catatcggct tcggcaaccg aaccggcttt gcattcggcg ataaatgcct
     6061 gcaattcggg tttgtcggcg gctgcggctg ttgccagcgg atgttcggcg gcaacagcga
     6121 cataagtcgc acccatcagc gtgtcggggc gggtggtata aacttgcagg aatttcgcgt
     6181 aatcgccttc caaaccttgc ttgctgtcgt ctgaaacggc gaagcgcacg gtcatgccgc
     6241 gagatttgcc gatccagttg cgctgcatgg ttttgacttg ttccggccag tgttccagct
     6301 tgtccaaatc gttgagcagc tcttcggcgt aatccgtgat tttgaagtaa tacatcggga
     6361 tttcgcgttt ttcgatcaac gcgcccgaac gccagccgcg tccgtcgatg acttgctcgt
     6421 tggcaaggac ggtttggtcg accgggtccc agttcaccgt gccgtttttg cgatagacga
     6481 tgcctttttc aaacagcttg gtaaacagcc attgttccca gcggtagtat tcgggtttgc
     6541 aggtggcgac ttcgcgttcc cagtcaaccg caaaacccag gcttttgagc tgggttttca
     6601 tgtattcgat gttgtcgtag gtccaagcgg cgggggcgac gttgtttttc atcgccgcat
     6661 tttccgccgg catgccgaac gcgtcccaac ccataggctg cataacgttg aagccgttta
     6721 aaagtttgaa gcggctcaat acgtcgccga tggtgtagtt gcgtacatgc cccatatgca
     6781 gcttgccgct agggtaaggg aacatcgaaa ggcaataata tttgggtttg gaagcgtctt
     6841 cggagacgtt ggaaatacgg gcgtcgtccc attttttctg cgccgcaggc tcgatggcgg
     6901 cgggctggta atgttcttgc atggtcattt tgtttttcgc ttgaaaacgt taggaattta
     6961 aaggaggaat tataacaggt tgccgatgtc ggcgaatcgg caaattgccg gcaggatgcg
     7021 taaattcgca cgcgcatcat tccgtatgcc gtacaaatac accgcgttta ctgatacgca
     7081 cgttttttat gctaatatta cgaaccaaaa tcaaacgttt aaaactctcc tgatgcggct
     7141 cttccgaaca aaaggcagac gggcatcggg taaaaaagga ttctgcatat gaaaatcaaa
     7201 caaatcgtca aaccgagctt ggcagtattg gcggcaggca ttctgtctgc ctgcgcaacc
     7261 ataaagcaac gtcaaagccg acggcacgac cgacaatccg gttttcccgg aaccctattc
     7321 cgtaacgctc gacaacaagc gcggcacatt cccgacttat gacgaactgg atcagatgcg
     7381 ccccggtctg accaaagacg acatctacaa aatcccgggc cgcccgcatt acgacgaagg
     7441 tatgtacggc gtgcgcgaat gggattacct gttccacttc cacaccccgg gcgtgggtat
     7501 cgaccctgaa aacacttccg gcgtggaagg cgttactacc tgccaataca aagtgatttt
     7561 cgataaagac aaatttgccc gcagcttcta ctggaacccc gtcttcccga aagatgccgt
     7621 ctgcccgccg cccgcaccca aagccgagcc gcaagtcatc atccgcgaaa tcgtgccggc
     7681 aaaaccgaaa cgtatccgcc aataagccgc tatgccgccc cgcctgcttt cagggatatt
     7741 gtgctgcctg ctgacgactg cccccgtatt cgcacagggg cagccggatg cggtcagtgc
     7801 ctatattcaa aagaaaaaag tcatcgtcga cacatccaag gcggaactct gttttgccga
     7861 cgaccgtcag tgccaccccg tcctcatcgg cactgccaca cccaagggga cgttcggact
     7921 gacgctgaac agtaccgaca agcccggtta cggcggcgaa gtcatcggtt tcaagcagga
     7981 gggcgatttt cttttcgccc tgcaccgcgt ttggaatcag ataccgtccg aaaggcgaaa
     8041 cgaacgcatc gcctccccgt ccgtgtccga caggattatg accaacggct gcatcaacgt
     8101 cagcgatgcg gtgtacgaaa aactgcgtca ttattttgtg ttggaagtga tttgaaacag
     8161 acggataccg cacgtgccgg tatccgtttt cacattgccc cgatgcctga aacagaccgt
     8221 ccgtcacgtc atgccgcctg aaaccggcgc agatgccgcc aagccttcag acggcattgt
     8281 ccgcccgctc cgaccgaaca acaaccatct ttgggagaac cttatgaccg aacaaaaccg
     8341 catcctctgc cgcgaactga gcctgctggc attcaaccgc cgcgtgttgg cacaggcgga
     8401 agacaaaaac gtcccccttt tggaacgcct gcgcttcctg tgcatcgtgt cgtccaatct
     8461 tgacgagttt tttgaagtcc gcatggcgtg gctcaagcgt gaaaacaagc tgcacccccg
     8521 gcgcaggccg gacaacggca aaacgccgtc tgaaaccatc gccgacgtta ccgaagcggc
     8581 gcgctccctg atacggcacc agtacgacct gttcaacaac gtccttcagc ccgagttggc
     8641 gcgggaaagc atccattttt accgccgccg caattggacg ggcacgcaga aaaaatggat
     8701 cgaagactat ttcgaccgcg aactgctgcc gatcctgacc cccatcggac tcgacccttc
     8761 ccaccctttc ccgcgcccgc tgaacaaatc gctcaacttc gccgtagaac tcgacggcac
     8821 ggacgcgttc ggcaggcctt cgggtatggc gattgtccaa gcaccgcgca tcctgccgcg
     8881 cgttgttccc ctgccgtccg aactgtgtgg cggcggacac ggcttcgtct tcctgtcgtc
     8941 catcctccac gcccacgtcg gcaaactctt cccgggcatg aacgtcaaag gctgccacca
     9001 gttccgcctc acgcgcgaca gcgacttgac cgttgacgaa gaagacgtac aaaacctccg
     9061 cgccgccatt caaaacgaac tgcacgaccg cgaatacggc gacggcgtgc ggctcgaagt
     9121 cgccgacacc tgtcccgcct acatccgcga ctttctgctc gcgcaattca ggctgaccga
     9181 cgccgaactc tatcaggtca aaggcccggt caacctcgtc cgcctcaacg ccgtccccga
     9241 cctagtcaac cgccccgatt tgaaatttcc gccgcacacg ccgggccgtc tgaaagcctt
     9301 gggcaaaaac agcccgatct tcgatttggt gcgccaatcg cccatcctgc tgcaccaccc
     9361 ctaccaatct ttcgatcccg tggtcgatat gatacgcgaa gccgccgccg atcccgccgt
     9421 tcttgccgtc aaaatgacga tttaccgcac cggcacgcgc tccgaactcg tccccgccct
     9481 gatgaaggcg gcactcgccg gcaaacaagt aaccgtcgtc gtcgaactga tggcgcgttt
     9541 tgacgaagcc aacaacgtca actgggcgaa gcagctcgaa gaggcgggag cgcacgtcgt
     9601 gtacggcgtg ttcggctaca aagtccacgc caaaatggca ctggtcatcc gccgcgaaga
     9661 cggcgtgctc aagcgttacg cccacctcgg cacgggcaac taccaccaag gcacatcgcg
     9721 catctacacc gacttcggcc tcattaccgc cgacgaacaa atcaccgccg acgtgaacac
     9781 attatttatg gaaatcacag gcttgggcaa acccgggcgg ctgaacaaac tctaccaaag
     9841 tccgtttacc ctgcacaaaa tggttatcgg ccgcatcgct cgcgaaaccg aacacgcaaa
     9901 agccggcaaa ccggcgcgga ttaccgccaa gatgaattcg ctcatcgaac cgactgtcat
     9961 agaagccctg tatcgggcaa gcgcggcagg cgtgcaaatc gatttgattg tgcgcggtat
    10021 gtgtaccttg cgcccgggtg taaaaggctt gtccgaaaac atccgcgtcc gctccatcgt
    10081 cggcaggcag ctcgaacacg cgcgcgtata ttgtttccac aacaacggcg cggacgacac
    10141 ctttatttcc agcgcggatt ggatggggcg caatttcttc cgccgcatcg aaaccgccac
    10201 cccgattacc gcgcccgaac tcaaaaaacg cgtcatccgc gaaggtttgg aaatggcact
    10261 ggcagacaat acccacgcgt ggctgatgca gcccgacggc ggctatatcc gcgccgcgcc
    10321 cgccgaaggc gaaagcgaag ccgacctgca aaacgattta tgggatttgc tccgaggctg
    10381 acccgcacaa gcacttcccc catacgctcc caaccccaat ccgccgcatt ccagacggca
    10441 ttgcctttcc gacagccgaa caaaaccccg aatccgtctg cacggttcgg ggcatatctc
    10501 caatacgggc atcgtgttcc ggaaaaccgt caaatccgca tcggcatcac aatatatttg
    10561 aaattcggat tgttcggcac ggtaaacagc gtcgagcggt tggcgtcgcc gaaggcaagc
    10621 tgcatatcgt cggaatggat gttgcgcaac acgtccatca aatagccgat attgaaaccg
    10681 acttcgagtt cgccgccctg ataggcgatt tcgatttctt cgcgcgcttc ttcctgctcg
    10741 ttgttgctgc acacgacgct caacaggccg ggttgcagga acaggcgcgc gccacggaat
    10801 ttttcgttgg caagaatgga cacacgttcc agcgcgccca aaagttcggc acgggacaac
    10861 acgaaaatct tgtcgttgtc caaaggaatc acgcggttga aatcggggaa tttgccgtcg
    10921 atgaccttgc tgacgatggt cgtgccgttg cattggaaac gcacctgctt gtccagcagc
    10981 tcgatttgaa tcggatcgtc ggggttgttc aacagtttga acagttccag caccgttttg
    11041 cgcggcaaaa tcacttcggc gcgcggcaaa tccgcatcaa tcgcgcaggc tgcataggca
    11101 aggcggtgtc cgtcggtcgc cacaaggcgc aactggctgc cctcaacctg catcagcaga
    11161 ccgttgagat aatagcggat gtcctgcacc gccatgctgt actgcacttg cgacagcatg
    11221 gttttgaaac gctcctgccc cagcgagaaa gtcgcgctga tgtcctcgcc gacattcatc
    11281 atcggaaaat cggcggcagg cagggtttgc agggcaaaac gcgatttgcc cgccttcagc
    11341 gtcagacggt tgtcgtccca atccagcgac accagcgcac cggcaggcag cgcgcgcaaa
    11401 atgtcctgaa atttcttggc attggtagtg atgcggaagt cgcccgcacc tccctcggga
    11461 cccgcggtgt cgatttggat ttccaaatcg gttgccaaga gtttggtctg accgcccctg
    11521 ccctcaatca gcacattgga caggatgggc agggtgtgtc ggcgttcgac gatgccggta
    11581 acggcttgca gcggcttgag caggctgtcg cgctcggctt gtaaaatcaa cattttcgct
    11641 ccttaaatcg gttggatttc ctacccttcg gacggcatgg tcaatgtcat gccgtctgaa
    11701 aggcgtgtcc ggtcagtttt gaatcagaat cagcagtttc tcgtaatcct gcgccaactc
    11761 ggggtcttcc tcgcgcagtt tcgccaccgc cctgatgccg tgcatgacgg tcgtatggtc
    11821 gcgtccgccg aacgaatcgc cgatagacgg caggctcaaa gtggtcaatt ctttggtcag
    11881 gctcatggca acctgacgcg gacgggcaat gttgcgcgtg cgttttttgc cgagtacgtc
    11941 gctgattttg atgcggtaat atttcgccac cgcatcgatg atgatgtcgg cggtgatgac
    12001 tttgtgcttc tcggcaataa tgtcctgcaa agcggtacgc gccaaatcga tgtcgatgac
    12061 gggacggttc ataaagcggc tgctcgctcc gacacggttg aacgcgcctt ccagttcgcg
    12121 cacgttggaa cggatcagat tggcaatgaa cagcgcggct tcgtcttcga tactgatgcc
    12181 cgccgcttcc gcctttttct gcaaaatggc gatacgcatt tccaattcgg gcggctcgag
    12241 ttccaaagtc agcccccacg aaaagcggga tttgaggcgg tcgtccatac cttcgatttt
    12301 ggcgggtaaa acatcgcaag tgaggatgag ctgttttttc tcattgtgaa aatggttgta
    12361 cagatagaaa aattcttcca tcgtacggtc ttttcctttg atgaactgaa tatcgtcgat
    12421 aatcagcagg tcgtattgct tgtattgctg cttgaacacg tcgtaggtat tgttgcgaac
    12481 cgccttcata aagctgcgga tgtagtcgtc cgaatgcata tagcgcactt tggcatcggg
    12541 acggtttttc aacagctcgt tgccgaccgc ctgcacaagg tgggttttgc ccaaacccgt
    12601 gctgccgtac aggaagaacg ggttgtaact ctgccccggg ttttccgcaa tcgcctgcgc
    12661 cgcagccgcc gcaaggcggt tgcccttacc ttctaccaac gtatcaaacg tgtaatccgg
    12721 agacaggttg gtttgttcgt aacgcgcttc ttccgcatca cgctgcgcat ccgtccgcgc
    12781 tttggcaact gccgccgatt ccggccggga agcaggcccg gcagcctgac gcggctcgtg
    12841 cggcaggttt ttcatacgtt ccgccaaaat atccgccgcc gttttcgacg cagcgggttt
    12901 gacaggcttt tcagacggca gctcgtccaa cagaacctcc tgcacgggca tctcctccga
    12961 ccccgcgtgc aaggacggct cggcaggttc gacagcacct tcaaccgccg ccatctcata
    13021 acgcacgcct tctcccggtt tgaatacgaa ggcgggacgg ccggcagcca actcttccct
    13081 caccgcttct atttttccgg caaactggct cttgagcata ttgcaggcaa actggttctt
    13141 gccgtacacc acccatacgc caccctcctc accaaccgta aggggcgcaa tccattgcgc
    13201 aaactgcccg tgaggcaaca tatcgtgaag acggcggagg cacagcggcc aaaactctgc
    13261 taatgtcatg gataggctcg aatcggtaaa aatgaaatcg aaaacaaaga aaatataata
    13321 ttttcaaaaa gaaaacaaat ctgttgaata cgcgtcggtt caaaacgcag cgaaccgatt
    13381 ataccgactc gccgatattt tatccacaac ccgtgcaaaa atttatccac agaaaggcgg
    13441 cagaaatccg caggcaatcg ggcaatcctc ctgcaaagtt tctatattga ttgacaaaag
    13501 cggcaaattg gagtgtaatt cacggtttaa ttatctaccc attctatttt aggaaccatc
    13561 atgaaacgca cttatcaacc ttccgttacc aaacgcaaac gcacccacgg cttcctcgtg
    13621 cgctccaaaa cacgcggcgg acgcgcagta ttggccgcac gccgtgccaa aggccgcaaa
    13681 cgcctggcag tgtaattttg gactaccgct tcggaaggca gtaccgcttg ttaaaaacgg
    13741 atgatttttc atccgttttt gcattcagaa accgccgcag ccgcgacctg ctgcaagttt
    13801 cgcgctcaaa cggcaacggg ctggaccatc cccgcatcgg tctggtggtc ggcaaaaaaa
    13861 ccgccaaacg cgccaacgag cggaactata tgaaacgcgt catccgcgac tggttcagat
    13921 tgaacaaaaa ccggctgccg cctcaggatt tcgtcgtgcg cgtccgccgg aaattcgaca
    13981 gggctaccgc aaaacaggca agggcggaac tggcacaact catgttcggc aaccccgcaa
    14041 ccggatgcgg gaaacaggta tgatcagaac ggtactctgc acgcaaggtt cagacggcaa
    14101 cgggtttccc atacaaggaa catcccgatg aacttcctat tgtccaaact gctgctgggg
    14161 ctgataaggt tttaccaata ctgcatcagc ccgctgattc cgccgcgctg ccgttatacg
    14221 ccgacctgtt cgcaatacgc ggtcgaagcg gtcaaaaaat acggcgcatt caaaggcctc
    14281 cggctcgcca tcaagcgcat tgcacgctgc caccctttcg gcggacacgg acacgacccc
    14341 gttccctgac ccgacgcaat attcaaattg cacgctttcc ttttatttcc catcggtttc
    14401 tatataatgc cgtctgaacc ttcgggctgg cggcacggcc gtcgggtatg aagcccgccc
    14461 ttattccccg tctatcggaa cacgcaacct gcggcatttc cgaccattca ggaaactcta
    14521 tatggatttt aaaagactca cggcgttttt cgccatcgcg ctggtgatta tgatcggctg
    14581 ggaaaaaatg ttccccaccc cgaaacccgt ccccgcgccc caacaggcgg cacaaaaaca
    14641 ggcagcaacc gcttccgccg aagccgcgct cgcgcccgca acgccgatta ccgtaacgac
    14701 cgacacggtt caagccgtta ttgatgaaaa aagtggcgac ctgcgccggc tgaccctgct
    14761 caaatacaaa gcaaccggcg acgaaaacaa accgttcgtc ctgtttggcg acggcaaaga
    14821 atacacctac gtcgcccaat ccgaactttt ggacgcgcag ggcaacaaca ttctgaaagg
    14881 catcggcttt agcgcaccga aaaaacagta caccctcaac ggcgacacag tcgaagtccg
    14941 cctgagcgcg cccgaaacca acggactgaa aatcgacaaa gtctatacct ttaccaaaga
    15001 cagctatctg gtcaacgtcc gcttcgacat cgccaacggc agcggtcaaa ccgccaacct
    15061 gagcgcggac taccgcatcg tccgcgacca cagcgaaccc gagggtcaag gctactttac
    15121 ccactcttac gtcggccctg ttgtttatac ccctgaaggc aacttccaaa aagtcagctt
    15181 ctccgacttg gacgacgatg cgaaatccgg caaatccgag gccgaataca tccgcaaaac
    15241 cccgaccggt tggctcggca tgattgaaca ccacttcatg tccacctgga tcctccaacc
    15301 taaaggcggc caaagcgttt gcgccgcagg cgactgccgt atcgacatca aacgccgcag
    15361 cgacaagctg tacagcgcaa gcgtcagcgt gcctttagcc gctatccaag ccggcgccaa
    15421 agccgaaact gccgtcaacc tgtatgccgg tccgcaaacc acatccgtta tcgcaaacat
    15481 cgccgacaac ctgcaactgg caaaagacta cggtaaagta cactggttcg catcgccgct
    15541 cttctggctc ctgaaccaac tgcacaacat tatcggcaac tggggctggg caatcgtcgt
    15601 tttgaccatc atcgtcaaag ccgtactgta tccattgacc aacgcctcct accgttcgat
    15661 ggcgaaaatg cgtgccgccg cacccaaact gcagaccatc aaagaaaaat acggcgacga
    15721 ccgtatggcg caacagcaag cgatgatgca gctttacaaa gacgagaaaa tcaacccgct
    15781 gggcggctgt ctgcctatgc tgttgcaaat ccccgtcttc atcggcttgt actgggcatt
    15841 gttcgcctcc gtagaattgc gccaggcacc ttggctgggc tggattaccg acctcagccg
    15901 cgccgacccc tactacatcc tgcccatcat tatggcggca acgatgttcg cccaaaccta
    15961 tctgaacccg ccgccgaccg acccgatgca ggcgaaaatg atgaaaatca tgccgttggt
    16021 tttctccgtc atgttcttct tcttccctgc cggtttggtt ctctactggg tggtcaacaa
    16081 cctcctgacc atcgcccagc agtggcacat caaccgcagc atcgaaaaac aacgcgccca
    16141 aggcgaagtc gtttcctaaa tgccgcagca tgaaaaatgc cgtctgaaac ctgttcagac
    16201 ggcattttta ttgttcaccc cctatcgggg cggaaatctt caacccgcat acatcacaaa
    16261 aatcgtcggg cgttttttca gattgggcat ttccttcatc ctgcgccaat ccgcaaccgt
    16321 tttactgacc accaactgag tcggcaacgt caaatccgta gccgtacaca agcgcgtttc
    16381 aggatgcagg ttttccaccg catcggcaag cagcgcatca ttgcggtaag gcgtttcaat
    16441 aaaaatctgc gtctcgccgc actgccgcga acgttgctcc aaagcattca aactctgaat
    16501 gcgctcattt ttttcagacg gcagataacc attaaacgca aagttctgcc cattcgcacc
    16561 cgaagccatc agcgccagca gcaggctgga cgggccgacc aaaggccgta cttcaaaacc
    16621 gtgtttatgc gccaatgcca ccaaattcgc gcccggatcg gcaacagccg ggcaacccgc
    16681 ctcgctgaca atccccatac tgcgcccttc ttgcaaaggt ttcagcaatt ccggcaaagt
    16741 cttcaaatcc gtgtgttcat tcaatgtttg cagattcagt tcgcgtatcg gcgtcgttat
    16801 ccccaaatgc ttcaaatgcg cacgcgccgt tttttccgct tccacgacaa aatccgtcag
    16861 cccgacaacc gcccgttgtt catgctgcaa caggcacggc gtgtcaggcg tacccaaagg
    16921 cgtaggaatc aaatacaaaa caggagacat cattccctca ctcatcggtt aaaaatgccg
    16981 tccgaaccct tcagacggca taaacgggca gttacaaaac atccacgccc tcgtttttca
    17041 aaaaatcgac cagacggaaa accggcagac caatcaaggc attcggatcg gtactttcaa
    17101 tccgttcgat caacagcgcg cccaagccct cgcttttcgc cgcacacgaa caataaaccg
    17161 catccggctc gcgctccaaa tagcggagga tgtgcagctc gtccaactgc ctcatcacga
    17221 ccaccgtctt atcgatatgc cgatgcatcc tgcccgtaac cgtatttagc agaacgaccg
    17281 cactgtaaaa ctcaatctcc ctgccgctca aatgcatcaa catcttttgc gcgttggcaa
    17341 ggttcatcgg cttgccccac tgcctgccgt cgcaccacgc cacctggtcc gcaccgacaa
    17401 tcaacgcccc ggggaaacgc ccggtcaacg accgcgcctt accctcggca aggcgcaatg
    17461 ccgtctgagg ggcggattcc cccaacatcg gcgtttcgtc aaaatcgggg gatgccgcct
    17521 gaaaggcaat gccgagcctt tccatctgtt cgcggcggaa aaccgaactc gtacccaaaa
    17581 ccaaaggcag ttccaaaccc atcccatcct ccttaccgtt gaaaacacgc ccgaaggggc
    17641 ggtaaaatcc agccatgcgc cgaaacacgg acgcccgcct tcggcgtacc gcaacatttt
    17701 tcttaaaaat attgacgtta gaacatctaa attatatcat accccgttta tgtcagaccc
    17761 taatttgatt gacccggaaa tttttgccgc cgaaaggcag aacctgcaag gcagttttct
    17821 gctggaagaa ttggacgagc gagtcagttt gcacgattat cccgccgaca ggcggaccaa
    17881 aatatcgttt acactgaccg gcggtcgcga ccggctgcaa cgcctgttcc tcgacctgaa
    17941 cgtcaaagcc gatatgcccc tgatttgcca gagatgtatc aaacccatgc cgttcatgct
    18001 cgatgaaagc agccgtatca tcctgttttc cgacgaagag tccttggacg aatccatgct
    18061 tgccgacgaa gaactcgaag gcatactgat tgaaaaagaa ctcgacgtgc gcgcattggt
    18121 agaagaccaa atcctgatgt ccctgccctt ttcgccgcga cacggacact gcggcaatac
    18181 ccttccggaa tccgccaacc aagacaaacc caaccccttt gctgttttgg cgggtttgaa
    18241 aagcagttaa ttaggacaca gtttatttat ctaggagctt gaaatggccg ttcaacaaaa
    18301 caaaaaatcc ccttccaaac gcggtatgca ccgttcgcac gacgcactga ccgcgcccgc
    18361 actgtttgtc gacagcacaa ccggcgaagt acaccgcccg caccacatct cccccaacgg
    18421 tatgtaccgc ggccgcaaag tggtcaaagc caaaggcgaa taatccctat tcgactgact
    18481 gaaaaagcca gaacattgcc atgcaattac tggctttttt tgcattggac gcaccatccg
    18541 tccaaacttt cgccatacgt caacacacag gggcaaagcg ttccgtataa taccccgtga
    18601 aaatattcca aaagccccaa ccaccaagga aattccgatg aaacagaaaa tctggtacac
    18661 ctacgatgac atccaccgcg tcatcaaagc attggcagaa aaaatccgga acgccggcgt
    18721 caaatacgat gccatgatcg ctatcggcgg cggcggcttt attccggcac gcatgctgcg
    18781 ctgttttctg gaaattccga tttatgccgt aaccaccgcc tattacgaca gcgacagcga
    18841 aggacaagtt accgaagaag tcaaaaaagt ccaatggcta gaccccgtcc ccgaagtcct
    18901 gcggggcaaa aacgtgctcg tcgtcgatga agtggacgac agccgcgtaa ccatggagtt
    18961 ctgcctgaaa gaactgctca aggaagactt cgacactgtc ggcgtcgccg tcctgcacga
    19021 aaaaatcaaa gccaaagcag gcaaaatccc cgaaggcatt ccctatttca gcggcattac
    19081 cgtagaagac tggtggatca actatccgtg ggacgcactc gacatcgacg aacacaaccg
    19141 ccttgccgaa gccggccgag gctaaccctt tcagacggca tattttccga accgatgccg
    19201 tctgaagccc gcacgacccc tgccgcagac cgaaaatcta ccggagaaac ccctatgatt
    19261 acattggccg tagatgccat gggcggcgac caaggacttg ccgttaccgt acccggcgca
    19321 accgcattcc tccaagcaca ccccgatgtc cgcctgatta tgaccggcga cgaaacgcag
    19381 ctccgccaag ccctgaacgc ggcaggcgcg ccgatggaac gcatcgacat ctgccatacc
    19441 acccaggttg tcggcatgga tgaatcccct cagtccgccc taaagaacaa aaaatactcc
    19501 tccatgcgcg ttgccatcaa ccaagttaaa gaaggcaaag cccaagccgc cgtatccgca
    19561 ggcaacacgg gcgcgctcat ggcaaccgca cgtttcgtcc tcaagaccat acccggcatc
    19621 gaacgccccg ccatcgccaa attccttcct tccgacaccg accacgttac cctcgccctc
    19681 gacctcggcg caaacgtcga ctgcacaccc gaacagcttg cccaatttgc cgtcatcggc
    19741 agcgaactcg tccacgcgct ccatcctcaa aaaggacagc cgcgcgtcgg gctggtcaac
    19801 gtcggcacag aagacatcaa aggtacggat accgtcaaac aaacctacaa actgctgcaa
    19861 aacagcaaac tcaactttat cggcaacatc gaaagcaacg gcatcctgta cggcgaagca
    19921 gatgtcgtcg tcgccgacgg ctttgtcggc aacgtcatgc tcaaaaccat cgaaggcgca
    19981 gtcaaattca tgagcggagc catccgccgc gaattccaga gcaacctgtt caacaaactt
    20041 gccgccgttg ccgccctacc cgccctcaaa ggcttgaaaa acaaactcga tccgcgcaaa
    20101 ttcaacgggg ccatcctgct cgggctgcgc ggcatcgtca tcaaaagcca cggcggcaca
    20161 gacaaaaccg gtttccgcta cgcactcgaa gaagcctacc acgaagccaa gtccgccggc
    20221 ctttccaaaa tcgaacaagg cgttgccgaa caactcgccg cactggaagc cgcccaaaac
    20281 gaaaccgccg ccagtctgta acacgcacga tgccgtctga acgcccccgc ccctttcaga
    20341 cggcatccgg cacccgtcca aacctgcggg cgcggacggc gatgcgcctg tccggcactt
    20401 cccaaatact tccctgtaaa ataaggagta tttgaaaaat gaagacatta gaaaaacgga
    20461 tgaaagctct agacaaacgg atgatgaagt tcggaaaatc ccttgaaggc aggcttgatg
    20521 cccgtctgat tgaatccgca ttggattata ttcattattc ggaacgtttt ttggcttttg
    20581 acatcctgtg tacttatatc gaagatttcg atatccggct gacggaacaa gaatcccggg
    20641 aaatttcttt tatcaacaag gaatttgaga tagaaagcac gtccgattaa ccaataaagc
    20701 caatgatttg ataagaatga aaacatcgac ggtcgttttt ggcggatttt ttatggcaga
    20761 caacggggag cgaatccaaa tccccgtttt ggaaaatcct gacattaggg aaatcaatcg
    20821 ctttttttcc gtatcaaatt ttgagaaaaa agccggcgtc cttgttttca gaatcatccc
    20881 cgagccggaa tttggcaata ccgaattaac tgtctatttt gaaaaaggat attatagtgg
    20941 attaacaaaa accggtacgg cgttgccccg ccttggctca aagggaacga ttccctaagg
    21001 tgcccaagca ccaagcgaac cggttccgta ctatccgtac tgtccgcggc ttcgccgcct
    21061 tgtcctgatt tttgttaatc cactatattt gccaataatt caaacaattt tagaaggcgg
    21121 ggatattaaa gtaaaaaacc ttaaaacaga aaattacagc gggaaggcaa gggaaatctt
    21181 gggagattcc taccctattg aacatatctc taaaaatatt tctacaattc aaaatatcat
//
LOCUS       DAXGCP010000029        20853 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.029, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000029 DAXGCP010000000
VERSION     DAXGCP010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20853)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20853)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20853
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.029"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            80..2221
                     /gene="fetA"
                     /locus_tag="ACFJCW_000941"
                     /gene_synonym="frpB"
     CDS             80..2221
                     /gene="fetA"
                     /locus_tag="ACFJCW_000941"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HFC4151115.1"
                     /translation="MNAPFFRLSLLSLTLAAGFAHAAENNANVALDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFAGNEGVSYGASVFGKEGNFDGLFSYNRNDEKDYEAGKGFRNDNGGKT
                     VPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFAVSEKNSRITIKR
                     QAPAYRETTQSNTNLAYTGKDLGFVEKLDANAYVLEKKRYSADDKDNGYAGNVKGPNH
                     TRIATRGMNFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSEFEIKDKEKATNEEKKK
                     NRENEKIAKAYRLTNPTKTDTGAYIEAIHEIDGFTLTGGLRYDRFKVKTHDGKTVSSS
                     SLNPSFGVIWQPREHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKAERARNT
                     EIGFNYNDGTFAANGSYFRQTIKDALANPQNRHDSVAVREAVNAGYIKNHGYELGASY
                     RTGGLTAKVGVSHSKPRFYDTHPKKLLSANPEFGAQTGRTWTASLAYRFKNPNLEIGW
                     RGRYVQKAVGSILAAGQKDRDGKLENVVRQGFGVNDVFANWKPLGKDTLNVNLSVNNV
                     FDKFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
     gene            2373..3338
                     /locus_tag="ACFJCW_000942"
     CDS             2373..3338
                     /locus_tag="ACFJCW_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4151116.1"
                     /translation="MLRLTTLTLCTVLALGACSPQNSDPAPQAKEQAVSAAQSESASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESAKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVVLVNGGKMSAFGPSSRLGGWL
                     HKDIGVPAVDESIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLNNP
                     LVAETTAWKKGQVVYLLPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            3356..3547
                     /locus_tag="ACFJCW_000943"
     CDS             3356..3547
                     /locus_tag="ACFJCW_000943"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151117.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFDWNLPHPLPVRRF
                     QTRLSAPTVRTALFESPTP"
     gene            3566..4534
                     /locus_tag="ACFJCW_000944"
     CDS             3566..4534
                     /locus_tag="ACFJCW_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC4151118.1"
                     /translation="MTAKPFSLNLANLLLPAVLFAVSLSVGIADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     KNEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFVGLVVPNIVSRLTGDRLRQSLPAVALLG
                     ASMVLLCDILGRMIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            4524..5498
                     /locus_tag="ACFJCW_000945"
     CDS             4524..5498
                     /locus_tag="ACFJCW_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HFC4151119.1"
                     /translation="MPSEKNIGFMAGSSRPLRVAFALLLVSCILFMTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYTSLPLTGKFGFELVVMMGGSLLLFYTLIRQGGRDLPRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFTAAQANMFAGFNTVRSELLGIGALILLVSAAVVWHERYRSDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            5543..6169
                     /locus_tag="ACFJCW_000946"
     CDS             5543..6169
                     /locus_tag="ACFJCW_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HFC4151120.1"
                     /translation="MTQERLPEFFDRAPTLTVQDPLAAFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGTRDEGTVGITASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSLNAALQPFAPQ
                     MRDIMPKAVGGSASAKELERFGQLWQARVKAFLTESADDPQFVIVREL"
     gene            6253..7011
                     /locus_tag="ACFJCW_000947"
     CDS             6253..7011
                     /locus_tag="ACFJCW_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC4151121.1"
                     /translation="MITIRNVSYRIGTHPILDNVSLDIPEGGITALIGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLAGTPTAELARTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDLSDRYLTELSGGQRQRAMIAMVFCQSTDYVLLD
                     EPLNNLDMYHARSLMQILQKLTHEHKRTTVAVLHDINQAAAYADHVVAMKNGKAALTG
                     TPEEVFTVHNIKELFDMDVDVLDYEGKKLIVHHI"
     gene            complement(7046..7699)
                     /locus_tag="ACFJCW_000948"
     CDS             complement(7046..7699)
                     /locus_tag="ACFJCW_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4151122.1"
                     /translation="MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFY
                     RKIRTVTNHRLALAADEVFEGPAGPGGSYFGVRRKGRRGRGAAGKAVVFGIPKRNGRA
                     YTVAADDAEPETLLPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRR
                     NHINGIGSFWNQAKRALRKYNGIDRKPFPPLLRECEFRFNFGTPPRQLKILRDRCGI"
     gene            7685..8992
                     /locus_tag="ACFJCW_000949"
     CDS             7685..8992
                     /locus_tag="ACFJCW_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HFC4151123.1"
                     /translation="MCYLHISRATYLPIWYRPKKYAVALGSSSTASGEYSYASGYNSV
                     ASGNKSYAAGYAFVASAEGSIVIGDSRQVKPEADQGVAVGSKATVKNKAKQRVVVGSE
                     AKVNAERGIAIGKEAKAGGKTTNTLLDGPAYYADAIAVGYQAEAGKGGAIALGKQAKA
                     TKQNGMALGVESEAAGDFSTAVGNESKAKGQGGVGLGNQSKAEADFAVAVGNKAEATK
                     ENSLVIGRYARANGNHSVSLGSRSEIKDGVSNSVAPGYGSVASENNVVSVAYKETPQS
                     TELSYRKIVGVDDGVNDFDAVNVRQLKAMQGQNMAELFSVRSEVRGVAASSAALSALT
                     PLSYDANNPTQFMVGFGTYKGRQAMALGLSHFVNDRFMVKVGGTLGGNKTGHMMNVGL
                     TWKFGTSQGVPATSDKVLMEQLMQDNRQLKARLEKLEARLNAM"
     gene            complement(9131..9646)
                     /gene="coaD"
                     /locus_tag="ACFJCW_000950"
     CDS             complement(9131..9646)
                     /gene="coaD"
                     /locus_tag="ACFJCW_000950"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HFC4151124.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRNTYTAAERQDMLCAITDNFPNVRIEVFQNRFLVHYAREVDAGFIVRGIRSTSDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMIKGLVGPEGWMETVKRYVPPAVYQ
                     KMIAEHHNNNA"
     gene            complement(9776..10459)
                     /locus_tag="ACFJCW_000951"
     CDS             complement(9776..10459)
                     /locus_tag="ACFJCW_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HFC4151125.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSYISAALTLFISLYNIFSSLLN
                     ILLSLNGDD"
     gene            complement(10616..10882)
                     /locus_tag="ACFJCW_000952"
     CDS             complement(10616..10882)
                     /locus_tag="ACFJCW_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HFC4151126.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            complement(10956..11426)
                     /gene="rlmH"
                     /locus_tag="ACFJCW_000953"
     CDS             complement(10956..11426)
                     /gene="rlmH"
                     /locus_tag="ACFJCW_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HFC4151127.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDAAYALKEIKPEKRG
                     AGVNAVQGMAAEEKRILEAIPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            complement(11479..11865)
                     /gene="rsfS"
                     /locus_tag="ACFJCW_000954"
     CDS             complement(11479..11865)
                     /gene="rsfS"
                     /locus_tag="ACFJCW_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HFC4151128.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTIWGGEKPSFHAGMQKPWHAAD"
     gene            complement(11924..12529)
                     /gene="nadD"
                     /locus_tag="ACFJCW_000955"
     CDS             complement(11924..12529)
                     /gene="nadD"
                     /locus_tag="ACFJCW_000955"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HFC4151129.1"
                     /translation="MKKIGLFGGTFDPIHNGHFHIARAFADEIGLDAVVFLPAGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRESATYTFDTVQIFRRQFPSAQLWW
                     LMGSDSLLKLHTWKKWQLLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLSAAGVSDGIPPVAARYIRKHGLYEK"
     gene            complement(12526..13125)
                     /locus_tag="ACFJCW_000956"
     CDS             complement(12526..13125)
                     /locus_tag="ACFJCW_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HFC4151130.1"
                     /translation="MSELSEILSYNQKFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESRIPEDRIETLRYAGVDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            complement(13154..14695)
                     /locus_tag="ACFJCW_000957"
     CDS             complement(13154..14695)
                     /locus_tag="ACFJCW_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC4151131.1"
                     /translation="MDGRCWAVRGAFSLLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFAQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAGASALVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFSVAVLSVCCLFPLSAIVVKAWSAGESRRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRLVWMRGLVFLPFMVSPVCVSAGVLLLYPGWTASLPLLLAMYALLSYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFAVCIFLLLDNGEGGK
                     RTETL"
     gene            15054..16439
                     /locus_tag="ACFJCW_000958"
     CDS             15054..16439
                     /locus_tag="ACFJCW_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HFC4151132.1"
                     /translation="MDGRTQTLSAQTLLGISAAAIILILILIVKFRIRALLTLVIASL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFAPGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASVGAFS
                     VMHVFLPPHPDPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRAIHVPVP
                     ELLSGGTRDSDPPKEPAKAGTVVAVMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KMIGSTPVALLISVLAALLVLGRKRGESGSTLEKTVDGALAPACSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            16459..16977
                     /locus_tag="ACFJCW_000959"
     CDS             16459..16977
                     /locus_tag="ACFJCW_000959"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HFC4151133.1"
                     /translation="MTTHFVVMGVCGCGKTTAAPSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTQQAQNGADHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(17163..18080)
                     /gene="thrB"
                     /locus_tag="ACFJCW_000960"
     CDS             complement(17163..18080)
                     /gene="thrB"
                     /locus_tag="ACFJCW_000960"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HFC4151134.1"
                     /translation="MSVYTSVSDDEMRGFLSGYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFVGGYEGVRPLSAGEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLD"
     gene            complement(18117..18845)
                     /gene="ubiG"
                     /locus_tag="ACFJCW_000961"
     CDS             complement(18117..18845)
                     /gene="ubiG"
                     /locus_tag="ACFJCW_000961"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HFC4151135.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLCGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECVRVEDLAGAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVRPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFISPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            18997..20238
                     /locus_tag="ACFJCW_000962"
     CDS             18997..20238
                     /locus_tag="ACFJCW_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HFC4151136.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRGWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGIGSAVGGKISLTVGQLVFFGILAFCVWASARLVDRFTGVLIGGMVLTF
                     IWATGGLVADAKPSVLFDTQAPVGTGYWIYAATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWAGTLVALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSMSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGCVGLAATVWTGIIPAMLLYRSRQKFGAGKTYKVYGGLWLMVWVFLF
                     GIANIAAQVLSQMELVPVFKG"
     gene            20246..>20853
                     /locus_tag="ACFJCW_000963"
     CDS             20246..>20853
                     /locus_tag="ACFJCW_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC4151137.1"
                     /translation="MPFETRRRLQAALPQQTATVFRHTAHYPTPSRTNPAPTGAGRNH
                     KGTMMKLKIDIATNNFKHGGGTERYTLDLVKGLNRQNITPAVYATKFDHGIPEYAMIE
                     PHLVDQRRTLKKLRSFLFSSRLAQTRKNSAAKLIACHHADYADLLICGGTHLGYLHHM
                     AQKPNLLDRLAIRRNRSNYATAKLIVAHSHMMRRELVGLYGVP"
BASE COUNT         4879 a         6150 c         5416 g         4408 t
ORIGIN      
        1 ttattattat tttttcttat cctgccaaac cttaacggtt tggcttaact tcccttcata
       61 cactcaaaag gacgaacaaa tgaacgcccc gtttttccgc ctcagcctgc tctcgctcac
      121 acttgccgcc ggctttgccc acgcggcaga aaataatgcc aatgtcgcat tggataccgt
      181 taccgtaaaa ggcgaccgcc aaggcagcaa aatccgtacc aacatcgtta cgcttcaaca
      241 aaaagacgaa agcaccgcaa ccgatatgcg cgaactctta aaagaagagc cctccatcga
      301 tttcggcggc ggcaacggca cgtcccaatt cctgacgctg cgcggtatgg gtcagaactc
      361 tgtcgacatc aaggtggaca acgcctattc cgacagccaa atcctttacc accaaggcag
      421 atttattgtc gatcccgctt tggttaaagt cgtttccgta cagaaaggcg cgggttccgc
      481 ctctgccggt atcggcgcga ccaacggcgc gatcatcgcc aaaaccgtcg atgcccaaga
      541 cctgctcaaa ggcttggata aaaactgggg cgtgcgcctc aacagcggct ttgccggcaa
      601 cgaaggcgta agctacggcg caagcgtatt cggaaaagag ggcaacttcg acggcttgtt
      661 ctcttacaac cgcaacgatg aaaaagatta cgaagcaggc aaaggtttcc gcaatgacaa
      721 cggcggcaaa accgtaccgt acagcgcgct ggacaaacgc agctacctcg ccaaaatcgg
      781 aacaaccttc ggcgacggcg accaccgcat cgtattgagc cacatgaaag accaacaccg
      841 gggcatccgc actgtgcgtg aagagtttgc cgtcagcgaa aaaaattcac ggataactat
      901 taaacgccaa gcccctgcct accgcgaaac cacacaatcc aacaccaatt tggcgtacac
      961 cggcaaagat ttgggctttg tcgaaaaact ggatgccaac gcctatgtgc tggaaaaaaa
     1021 acgctattcc gccgatgaca aagataacgg ctacgcaggc aatgtaaaag gccccaacca
     1081 tacccgaatc gccactcggg gcatgaactt caacttcgac agccgccttg ccgaacaaac
     1141 cctgttgaaa tacggcatca actaccgcca tcaggaaatc aaaccgcaag cgtttttgaa
     1201 ctcggaattt gaaataaaag ataaagaaaa agcaactaat gaagagaaaa agaagaaccg
     1261 tgaaaatgaa aaaattgcca aagcctaccg tctgaccaac ccgaccaaaa ccgataccgg
     1321 cgcgtatatc gaagccattc acgagattga cggctttacc ctgaccggcg ggctgcgtta
     1381 cgaccgcttc aaggtaaaaa cccacgacgg caaaaccgtt tcaagcagca gccttaaccc
     1441 gagtttcggc gtgatttggc agccgcgcga acactggagc ttcagcgcga gccacaacta
     1501 cgccagccgc agcccgcgcc tgtatgacgc gctgcaaacc cacggcaaac gcggcatcat
     1561 ctcgattgcc gacggcacca aagccgaacg cgcgcgcaat accgaaatcg gcttcaacta
     1621 caacgacggc acgtttgccg caaacggcag ctacttccgg cagaccatca aagacgcgct
     1681 tgccaatccg caaaaccgcc acgactctgt cgccgtccgc gaagccgtca acgccggcta
     1741 catcaaaaac cacggttacg aattgggcgc gtcctaccgc accggcggcc tgaccgccaa
     1801 agtcggcgta agccacagca aaccgcgctt ttacgatacc catcctaaaa aactgttgag
     1861 cgcgaacccc gagtttggcg cacaaaccgg ccgcacttgg acggcctccc ttgcctaccg
     1921 cttcaaaaac ccgaatctgg aaatcggctg gcgcggtcgt tatgttcaaa aagccgtggg
     1981 ttcgatattg gcggcaggtc aaaaagaccg cgacggcaaa ttggaaaacg ttgtacgcca
     2041 aggtttcggt gtgaacgatg tcttcgccaa ctggaaaccg ctgggcaaag acacgctcaa
     2101 tgttaatctt tcggttaaca acgtgttcga caagttctac tatccgcaca gccaacgctg
     2161 gaccaatacc ctgccgggcg tgggacgtga tgtacgcctg ggcgtgaact acaagttcta
     2221 aaacgcacat cccgaaaaaa tgccgtctga aagcctttca gacggcatct gtcctgataa
     2281 tttgatatag attatcattt atcctttcta aagccgttcc ggtttgtccg accggcggct
     2341 ttgccccaat atccccattt tggagacacc ctatgttgcg tttgaccaca ttgaccctct
     2401 gcaccgtcct cgccttgggc gcgtgttcgc cgcaaaattc cgaccctgcc ccacaagcca
     2461 aagaacaggc ggtttccgcc gcacaatccg aaagcgcgtc cgttaccgtc aaaaccgcgc
     2521 gcggcgacgt tcaaataccg caaaaccccg aacgcatcgc cgtttacgat ttgggtatgc
     2581 tcgacacctt gagcaaactg ggcgtgaaaa ccggtttgtc cgtcgataaa aaccgcctgc
     2641 cgtatttaga ggaatatttc aaaacgacca aacctgccgg aactttgttc gagccggatt
     2701 acgaaacgct caatgcctac aagccgcagc tcatcatcat cggcagccgc gcagccaagg
     2761 cgtttgacaa attgaacgaa atcgcgccga ccatcgagat gaccgccgat accgccaacc
     2821 tcaaagaaag tgccaaagag cgcatcgacg cgctggcgca aatcttcggc aaacaggcgg
     2881 aagccgacaa gctgaaggcg gaaatcgacg cgtcttttga agcggcgaaa accgccgcgc
     2941 aaggtaaggg caaaggtttg gtggttttgg tcaacggcgg caagatgtcg gctttcggcc
     3001 cgtcttcacg actgggcggc tggctgcaca aagacatcgg cgttcccgct gtcgatgaat
     3061 caattaaaga aggcagccac ggccagccta tcagcttcga atacttgaaa gagaaaaatc
     3121 ccgactggct gttcgtcctc gaccgcagcg cggccatcgg cgaagagggt caggcggcga
     3181 aagacgtgtt gaacaatccg ctggttgccg aaacgaccgc atggaaaaaa ggacaggtcg
     3241 tttacctcct tcccgaaact tatttggcag ccggcggcgc gcaagagctg ctgaacgcga
     3301 gcaaacaggt tgcggatgcg ttcaacgccg cgaaataatg aaacggcggc attcgatgcc
     3361 gtctgaaaca cggatgcaaa ccgcttcctg tgtttcagac ggcattgccc gatacgggcg
     3421 ttatcgcggg aatggcggca agcgttttga ttggaacttg ccccatcctc tgcccgtccg
     3481 gaggtttcaa acaaggcttt ccgctccgac ggttcggact gccttgtttg aatctcctac
     3541 gccgtaacgc ttttcccttc tgtttatgac tgccaaacct ttttccctca acctggccaa
     3601 cctcctgctg ccggcggtgt tgtttgccgt cagcctgtcg gtcggcattg ccgatttccg
     3661 ctggtcggat gtgttttcgc tgtccgacag ccaacaggtc atgttcatca gccgcctgcc
     3721 gcgcacgttt gcgattgtgt tgacgggcgc gtcgatggcg gtggcgggga tgattatgca
     3781 gattctgatg cgcaaccgtt ttgtcgagcc ttctatggcg ggtgcgggcc aaagtgcggc
     3841 tttgggtttg cttctgatgt ccctgctgct gcctgccgcg ccgctgccgg tcaaaatgtc
     3901 ggttgccgcc gttgccgcgc tgatcgggat gttggtcttt atgctgctga tccgccgcct
     3961 gccgccgacg gcgcagctga tggtgccgct ggtggggatt attttcggcg gcgtggttga
     4021 ggcggtggcg acgtttatcg cgtataaaaa cgaaatgctg caaatgctcg gcgtgtggca
     4081 gcagggcgat ttttcgagcg tgctgctggg gcggtacgag ctgctttgga ttacgggcgg
     4141 tttggcggtg tttgcctacc tgattgccga ccggctgacg attttggggc tgggcgaaac
     4201 ggtgagcgtg aatttgggtt tgaaccggac ggcggtgttg tggtcgggtt tgattattgt
     4261 ggcactgatt acatcgctgg tcattgtaac ggtcggcaat attccgtttg tcgggctggt
     4321 cgtgccgaat atcgtcagcc gcctgacggg cgacaggctg cgccaaagcc tgcctgcggt
     4381 cgccctcttg ggcgcgtcta tggtgctgct gtgcgatatt ttgggacgca tgattgtgtt
     4441 tccgtttgaa attccggtct ctacggtttt tggtgtgttg ggtacggctt tgtttttgtg
     4501 gcttttatta aggaaacctg cccatgccgt ctgaaaaaaa tatcggtttt atggcaggaa
     4561 gcagccgtcc gttgcgggtc gcctttgcgc tgttgctggt ttcctgcatc ctgtttatga
     4621 cgctcaacgt caagggcgat tgggactttg tcttgcacct gcgcctgacc aagcttgccg
     4681 cgctgctgat ggtcgcctat gcggtcggcg tgtccactca actcttccaa acgctgacca
     4741 acaacccgat tctgacccct tcgattttgg gtttcgattc gctgtatgtg tttttgcaga
     4801 ccttgctggt gtttacgttc ggcggcgtgg gctatacatc cctgccgttg acgggcaaat
     4861 tcggctttga actggttgtt atgatgggcg gctcgctgct gctgttttac acgctcatcc
     4921 gtcagggcgg gcgcgatttg ccgcgcatga ttttaatcgg cgtgattttc gggattttgt
     4981 tccgcagcct ttcctcgctg ctttcgcgca tgatagaccc cgaagaattt accgccgcgc
     5041 aggcgaatat gtttgccgga ttcaataccg tccgcagcga gcttttgggc ataggcgcgc
     5101 tgattctgct cgtcagcgcg gcggtcgttt ggcacgaacg ctaccgctcg gacgtacacc
     5161 ttttggggcg cgaccaagcc gtcaatttgg gcatcagcta cacgcgcaac accttatgga
     5221 tactgctttg gattgccgca ttggtggcga cggcgaccgc cgttgtcggc ccggtgagct
     5281 ttttcgggct tctcgccgcc tcgcttgcca accacttttc cccgtccgtg cgccattccg
     5341 tccgcctgcc gatgacggtt tgcgtcggcg gcatcctctt ggtcggcgga caaaccgtat
     5401 tcgaacactt cttgggcatg aaggcggtat taagcgtggt ggtcgaattt gcgggcggac
     5461 tcgttttcct ctatctcgtt ttaaaacaca aaaaatgacg gatgccgtct gaacggcagc
     5521 ccgccccgaa aggacaaacc atatgacgca agaacgttta cccgaatttt tcgaccgcgc
     5581 cccgacgctg accgtacaag acccgcttgc cgcattcctc ggcgcggccg aaaacggcat
     5641 cctcacttac cgctacgccg atgccgtgcg cctgtgcgga cattcctgcc cgaccgtcgc
     5701 gggcgcgtac ctgatggtta tcaaaggcct gaaagcactt tacggcgaag agctgcccga
     5761 acgcggcggc atcgaagccg ccatgcaggg aacgcgcgac gaaggcacgg tcggcataac
     5821 cgcgtccgtc gtccaactcc tcaccggcgc agcccccgaa accggcttcg gaggcatcgg
     5881 aatgcaggga cgcttcgccc gccgcaacct cttatccttt ggtgcaggcg aaatcaacgg
     5941 cacactgacc ctgcgccgca aagacaacgg caaaaccgtc gccgtcagcc tcaacgccgc
     6001 cctgcaaccc tttgcacctc aaatgcgcga catcatgccc aaagccgtcg gcggcagcgc
     6061 aagcgcaaaa gaactcgaac gcttcggaca actttggcag gcacgcgtta aagcattttt
     6121 gaccgaatcg gcggacgacc cgcagttcgt catcgtccgc gaactgtgaa cgttcagacg
     6181 gcattccgaa tttcaaatgc cgtccgaacc cccgccaaac aacaacaaac ctacgcccga
     6241 caagcatccg ccatgattac catccgcaac gtcagctacc gcatcggcac acaccccatc
     6301 ctcgacaacg tcagcctcga catccccgaa ggcggcatta ccgcgctaat cggccccaac
     6361 ggtgcgggca aatccaccct gttttccttt atggcgcggc tgcgcccgct tgaaagcggc
     6421 agcatcgcct accgaggcaa aaaccttgcc ggcaccccca ccgccgaact cgcccgcacg
     6481 ctctccatcc tcacccaaga aaacagcatc atgagccgca tcaccgtgcg cgacctgctg
     6541 atgttcggcc gttaccccta ccatcaaggc agaccgactg ccgaatgccg ccgtatcgtt
     6601 aacggtgcaa tcgaagaatt ccacctgcag gacctctccg accgctacct gaccgaactc
     6661 tccggcggac aacgccaacg cgccatgatt gcgatggtgt tctgccaaag caccgactac
     6721 gtccttttgg acgaaccgct gaacaacctc gatatgtatc acgcccgctc gctcatgcag
     6781 attctgcaaa agctcacgca cgaacacaaa cgcaccaccg tcgccgtatt gcacgacatc
     6841 aaccaggccg ccgcctacgc cgaccacgtc gtcgccatga aaaacggcaa agccgccctg
     6901 accggcacac ccgaagaagt gttcaccgta cacaacatca aagaactgtt cgacatggac
     6961 gtggacgtac tcgactacga aggcaaaaaa ctcatcgtcc accacatctg aagctcaaaa
     7021 agaaaggggc tgtactagat tatccctaaa ttccacaccg atcccgcagg atttttagct
     7081 gccggggcgg tgtgccgaag ttaaatcgaa attcgcattc cctcaacaac ggcgggaaag
     7141 gtttacgatc gattccgttg tatttccgca aggcgcgttt tgcctgattc caaaagctcc
     7201 caatgccgtt aatgtggttc cgacggtctg caaattcctt ggaacggttg atgcggcaac
     7261 gggtaaaacc gcccgcgtcc gacttgccgc ggctgcccgg gctatcggca taaacaatac
     7321 cgtccggcat gattttcttt ttgacggcag ggagcaacgt ttcaggctcg gcatcgtccg
     7381 cggcaacggt ataggcccgc ccgttgcgtt tcggaatgcc gaagacaacc gcttttcctg
     7441 ccgcgccgcg accgcgtctg cctttacgcc gtacgccgaa atagcttccg cccggcccgg
     7501 cggggccctc gaaaacctca tcggcagcca aggccaaacg atggttggta accgtgcgga
     7561 ttttacggta aaacagtgcc gccgaatcgg gatggatacc caaaatatcg gcggcagaac
     7621 gggcggtaac ttccggtaca aaagaacgga gcggttcttt ctgtacttct ttctttaatt
     7681 tgcagtgtgt tatcttcata tttcgagggc aacatatctg ccaatctggt acagacccaa
     7741 gaaatatgca gtagcattag gatctagttc tactgccagt ggagagtatt cctatgcgtc
     7801 gggctataat tctgttgcca gtggaaataa atcctatgct gcaggctatg cttttgttgc
     7861 cagtgcagaa ggcagtattg taattggcga ttcaaggcaa gtaaaaccgg aagcagatca
     7921 aggggttgca gtaggttcta aagcaacggt aaagaacaaa gctaaacaaa gggttgtggt
     7981 aggttctgag gcaaaggtaa atgcagaacg tggtattgcg attggtaaag aagccaaagc
     8041 agggggcaaa acaacgaaca cactgttaga tggaccggca tattatgcgg acgctattgc
     8101 cgtcgggtat caagcagagg ctggcaaagg tggcgccatc gctttgggaa aacaagcaaa
     8161 agcaacgaag caaaatggaa tggcactcgg cgtagaatca gaagctgccg gtgattttag
     8221 taccgccgtg ggtaatgaaa gcaaggcaaa ggggcaaggc ggcgtaggtc tcggtaacca
     8281 atctaaggca gaggcagatt ttgcggtggc tgtggggaat aaggctgaag cgactaagga
     8341 aaactcactt gtcattggcc gatatgcaag ggcaaacgga aatcattctg tgagtttagg
     8401 atctcgtagt gaaataaaag atggtgtgag caattctgtg gcaccgggtt atggttcagt
     8461 agctagtgag aataatgtcg tctctgttgc ctataaagaa acaccacaat ctacagaact
     8521 ttcctataga aaaattgtag gtgttgatga tggtgtcaat gattttgatg ccgtcaatgt
     8581 acgccagttg aaagcgatgc aaggacaaaa tatggctgag ctattttcag tacgcagcga
     8641 agtgcgtggt gtggcagcga gtagtgcagc cctatcggct ctgactccat tatcctatga
     8701 tgcaaacaat cctacgcagt ttatggtcgg tttcggcaca tacaaaggac gtcaagctat
     8761 ggcattagga ttgtcccatt tcgtcaatga ccgctttatg gtaaaagtag gcggaacctt
     8821 aggcggcaat aagacgggac atatgatgaa tgtaggcttg acttggaaat ttggaacgag
     8881 ccaaggtgtt ccggctacaa gtgataaggt gcttatggaa cagttgatgc aagataatcg
     8941 tcaattaaag gcacgattgg agaaattaga agcacgtctg aatgctatgt agccttgtgg
     9001 cgataacggt ttattgagta tatcgccaat gataaagtgc ataattttca aaccgttgat
     9061 aatatacaat aaattgtaac caatacctca aacgggtttg aacccgaata tgcctgacag
     9121 gaactttctg tcaggcattg ttgttgtgat gttctgcaat cattttttgg tacacggccg
     9181 gcggcacata tcttttgacg gtttccatcc agccctcggg cccgaccagt cctttgatca
     9241 tagtggacga cacttcggcg atttcgcgcg gcggcatgag gaatacggta gatatttcgg
     9301 gtgcgaggtc gctgttgata tggcgcatgg agcgttcgta ttcataatcg gaggtggaac
     9361 ggatgccgcg cacgatgaat cccgcatcta cctcacgggc gtaatgcacc aaaaaccggt
     9421 tttgaaacac ttcaattctg acgtttggga agttgtcggt aatggcgcac aacatatcct
     9481 gcctttcagc ggcggtatag gtgttgcgtt tgtcgggatt gatgccgatg gcgacgatga
     9541 gttcgtcaaa catagattgc gcctgccgta tcatccacag atgccccaat gtgggcggat
     9601 cgaaactgcc ggcataaacg gcgcggcgcg gtgtattcgg taacatttga ttcctcccgg
     9661 cttcatagcc ggctgtgttt ttatgtgttt gcatccgtat tgtatgccca aaacaaaatg
     9721 ccgtctgaaa ataagtgctt tcagacggca tggtttgcat ggtgtttcgc ctacatcagt
     9781 cgtcgccgtt taaggacagc aggatgttga gcaggctgct gaagatgttg taaagcgaga
     9841 taaacagtgt cagtgccgcg ctgatgtaac tgtcttcgcc gccgtcgatg acggtgcgta
     9901 cctgccacat aatcattaag gaactgaaca agacaaaacc ggcggaaatg gtcagggcaa
     9961 gtgcgggaat acccaaaaac agattggcaa ccacggcgac catcagaatg accgcaccta
    10021 cggtcaggaa gcgtccgagc gcgttcatat cgagccgggt tcggcgtgcc aatgcggaca
    10081 tcgttaaaaa gacggcggcg gtcatcgcgg cggcaatgcc gacgattttc gcaccgtcgg
    10141 caatatggag tgcgtattgc agcacggggc cgatcaatac gcccataccg aatgtgaata
    10201 ccatcagcag ggtaacgccg gtattgctgt aacggttttt ttcgatgaag tggatcatac
    10261 cgtagaaaaa cgccaatacg acggcaaatc ctatccagcg cgaaccgaag gcggcgtaaa
    10321 aattgaaacc ggcattggcg gcaagtgccg cgcctgcggc tgccggaatg aatgaaaatc
    10381 cgagcaggcg gtaggttttc tgcaggacgg tgtttttaga aaccgtatgc gcggtgtagt
    10441 cgtaaacgtc gtgttgcata tcatctgctc ctgaaagcgc ggttggaaat aacgggggat
    10501 tttaacattg cccaatgtca aaatttgtcc ggttgcgtga agataaagtt gtccggcgta
    10561 ttttaaaggc cgtctgaagc agtttcggac agcctgtgtt caaaacggaa aaccgttatt
    10621 gcggaacgta tccctgcacg gcatccgcgc cgtcgccgaa gaaatactgc tccatctgct
    10681 gagccaggta ttcgcgcgcg cgcggatcgg caaggcttaa gcggttttcg ttaatcagca
    10741 tggtttggtg gcgcgtccac gccgcccatg cttcttgcga tacgttttca aaaatgcgtt
    10801 tgcccaattc gttgggcagc ggcggaaatt tcatgccttc ggcttctttg ttgagcttga
    10861 cgcagaatac cattcgtgcc atagcggatt cctttgctgt gttcagaaat aacggggcga
    10921 ttttaaccga ttagggggta cagacaaaag cctttttatt cccgatgata aggatggttg
    10981 tgcaggatgg aaacggcccg gtagagctgc tcggtcagaa ggacgcgcac catgccgtgc
    11041 ggcagggtga ggctggacag gcgcatcatc atgcgggctt gttgtttgag gcggtcggtc
    11101 atgccgtccg cgccgccgat gacgaagcag acgtgttcgc cgttttgccg ccagcttttg
    11161 aggtgttccg ccagctcgac ggaggtcggt gctttgccgc gttcgtcaag aacgacgagg
    11221 aacgcgcctt gcggaatggc ttcaaggatg cgtttttctt ccgccgccat accttggacg
    11281 gcattcacgc ccgcgccgcg tttttcgggt ttgatttctt tgagtgcgta ggcggcgtcg
    11341 cgtccgaagc gtttggcgta ttcggcgacg gcctcatcaa cccaacgcgg cattttggtg
    11401 ccgactgcca agacggtaat gttcaatgct ttccccctta caggaaatgc cgtatgaata
    11461 ttcagacggc atcgggaatc agtctgcagc gtgccacggc ttctgcattc cggcgtggaa
    11521 actcggtttc tcgccgcccc agatggtgtc aatgtcgtag aagtcgcgca cggcagggag
    11581 catgacgtgg acgacgaggt ctcctgcatc aaccaacgtc cattcgccgc tgtctccttc
    11641 ggtactgagg atttcaaaac cggcttcttt caaatcgacg gcaacgttgt tggccagtgc
    11701 tttgacttgg cgcgtactgt cgccgctggc gataatcatt ctggcaaaca gcgaagtttt
    11761 gtcttgcgtt tcgagaacgg aaatgtcttt ggctttgatg tcttcgaggg cattgacggc
    11821 gaccccgacc attttttgca ggtcttgcag ttcttgttcg ttcattgttt tcctaacggg
    11881 atgttttcag acggcattat agccgttcct tactgatttg actttatttt tcatacaaac
    11941 cgtgttttcg gatataacgg gcggcgacag gcgggatgcc gtctgaaaca ccggcggcac
    12001 tcaggttgcg gcggatttcc gttgacgaca cattatgcat cggggctgac aagatgcgga
    12061 cgctgccgtc ctgaagggca ttgcccagcc acgcgtgcag ttcgcgcggg gtttggtgca
    12121 ggctgtcgcc ctgccgcatg gcgacggcga tattggtttc gcgcacgagc aactgccatt
    12181 ttttccaagt atgcagcttc agcaggctgt cgctgcccat cagccaccaa agttgcgcgg
    12241 acgggaactg ccggcggaag atttggacgg tatcaaaagt ataggttgca ctttctcgga
    12301 cgatgtcgca gtcgctgacg gcaaaacgcg cgtcttctgc cgtcgccagt tcgaccatgg
    12361 caaggcggtc ggcggcggaa gcggaggcgg cgtctttgtg atacgggccg cctgccggca
    12421 ggaaaacaac cgcgtccaac ccgatttcgt cggcaaaggc acgggcgata tgaaaatgcc
    12481 cgttgtgtat cgggtcgaaa gtgccgccga acagtccgat tttcttcatg atgtttccat
    12541 tccttccgat aagtccatgc cgtctgaaac actgccgtcc acaaccagcg tcagtttgcc
    12601 ggtaacggga tggatgacca gtccgtgaac ggcgatatgg cgcggcatca gcggatggtt
    12661 gcggataagg tccaccgtgt ggcgcacgct gtcttcgacg ttgtcgaaac cggtcagcca
    12721 gccgtcgagg tcgacacctg cataacgcag ggtttcgata cggtcttcgg gaatccggct
    12781 ttcccggacg cgcccgagga attcttcggc attcagcccc tgcataccgc aatcgtgatg
    12841 ggcgatgacc ataatctctc tgaccttcaa ttcaaacacg gcaaccaaaa ggctccgcat
    12901 caccgaaccc cacgggtgcg taaccagcgc gccggcattt ttaatcagct tggcatcgcc
    12961 gtttttcaaa cccaacgcgt cgggcagcag cccgataatc cgcgcatcca tacaggacaa
    13021 aaccgccagc ccgcgttcgg ggtatttgtc ggtaaagtat ttttcatatt ctcccgactc
    13081 gacaaacttc tgattatagg aaaggatttc gctcaactcg ctcattttgc cgtcctctga
    13141 aaaagggttc gcattataac gtttccgtcc gttttccgcc ttcgccgttg tccaacagca
    13201 ggaaaatgca caccgcaaat gccgacaaca gcaatgtcaa caccattgcc cgcgcataat
    13261 tgtcctcacc cgcacgcccc aaataggcat aaatcaaagt cgtcaacgtc tgccattccg
    13321 gacgcgacag gaacaaggtt gccgcaaatt cgcccacaca cgtcgccgcc gccaaagtca
    13381 gaccgcgccg caacgccggt ttcaagaggg ggaacgtgat acggcatgcc gtctgaaagc
    13441 cgtttgcgcc caaacctgcc gccgccctgc cgtaatccgg cggcagtgca tcccaggccg
    13501 ataaaacatc ttttgccaca aacggatacg acagcagcgc atacatcgcc agcagcagcg
    13561 gtaacgaagc cgtccacccc ggataaagca gcagcacgcc cgccgaaaca caaaccggcg
    13621 acaccataaa cggtaaaaac accagtccgc gcatccacac cagccgccgc gccgccgccg
    13681 catacaccac acccaaaacc gccgccgcaa acaccgccgc cgccgaaaag cgcaaagtat
    13741 tccacactgc ctgccacgtt tcactttcca ttaacacacg ccgcgattcg ccggccgacc
    13801 acgctttcac aacaattgcc gacaaaggaa acaggcagca cacggacaac accgccaccg
    13861 aaaatgccag caatacatat tcccccaccg attgcggcgg cgacggcatc acgggggaaa
    13921 ccgccttatc cgaaaccgcg cgcctgccga accacgcata cagcaaccct gccgccgccg
    13981 ttacccccaa caccagccac accagcgccg aagcccccgc catatcgagt tcgaacataa
    14041 ccaactggta aatttccact tcgaccgtgg cataacggct gccgcccaac agcaatgcca
    14101 gcccgaaccc cgaaaaacaa tacaggaaga caaggcacac gccgccggca agccacgggc
    14161 gcaaaacggg catttcaatg tcccaaaacc gccgccacgc ccccgcgccc aacgtccgtg
    14221 ccgtctgaag ccgtgccgca ggcacttgag caaacccctg atacgccgcc ctgaccaaca
    14281 cgggcaggtt aaaaaacaca ttgccgtaca acaacagata cggcgtatcc tgccggccgc
    14341 gccacaacag cccgtccgcc ccgaacagag ccagcacgcc cacgcccgcc accagcgtgg
    14401 gcatcacaaa cggcagcatc agcaggcgca gcaccaaagc ccgccccggg aacgccagcc
    14461 gcgccagcac ccacgcgaca ggcacgccca aaggcagcac cagcacacag gttgccgccg
    14521 cctgaaacac cgtccacgcc aaacgtttga gcatataggc atccgacagc accgcgcgcc
    14581 acgccaaacc gtcatacgcc gccaccgccc acaaaggcgc aacgaccatt accgccaaaa
    14641 aagccgaagg cagcagggaa aaagcacccc gtaccgccca acaccgtcca tccatcgcct
    14701 tccccacttg aaacactgat gttgcgattg tacccaaaag ccccacatac cgtatatttc
    14761 aatccgacta cgtaccgtat ccgccttcct cccgccgtct gaaatatagc ggattaacaa
    14821 aaatcaggac aaggcggcgg gccgcaggca gtacaaatag tacggaaccg gttccctttg
    14881 agctaaggcg gggcaacgcc gtaccggttt ttgttaatcc actataaatc gttcaaataa
    14941 acaggaatat aacttcagac aaacaactta ccgcccgatt tgtgctatcg ttttcgcaca
    15001 acttaaaaaa acctgacaat tttgtacttt tattacagag aaaggcttta caaatggacg
    15061 gccggacaca gacgctgtcc gcgcaaacct tgttgggcat ttcggcggcg gcaatcatcc
    15121 tcattctgat tttaatcgtc aaattccgca tccgcgcgct gctgacactg gtcatcgcca
    15181 gcctgctgac ggctttggca accggtttgc ccacaggcag catcgtcaac gacgtactgg
    15241 tcaaaaactt cggcggcacg ctcggcggcg tggcgcttct ggtcggtctg ggcgcaatgc
    15301 tcggacgttt ggtagaaaca tccggcggcg cacagtcgct ggcggacgcg ctgatccgga
    15361 tgttcggcga aaaacgcgca ccgttcgcgc cgggcgttgc ctcgctgatt ttcggcttcc
    15421 cgattttctt cgatgccgga ctaatcgtca tgctgcccat cgtattcgcc accgcacggc
    15481 gcatgaaaca ggacgtactg cccttcgcgc ttgcctccgt cggcgcattt tccgtcatgc
    15541 acgtcttcct gccgccccat ccggacccga ttgccgcttc cgaattttac ggcgcgaaca
    15601 tcggccaggt tttgattttg ggtctgccga ccgccttcat cacatggtat ttcagcggct
    15661 atatgctcgg caaagtgttg gggcgcgcca tccatgttcc cgttcccgaa ctgctcagcg
    15721 gcggcacgcg agacagcgac ccgccgaaag aacctgccaa agcaggaacg gtcgtcgccg
    15781 tcatgctgat tcccatgctg ctgattttcc tgaataccgg cgtatcggcc ctcatcagcg
    15841 aaaaactcgt gagcgcggac gaaacctggg ttcagacggc aaaaatgatc ggttcgacac
    15901 ctgtcgccct tctgatttcc gtattggccg cactgttggt cttgggacgc aaacgcggcg
    15961 aaagcggcag cacgttggaa aaaaccgtgg acggcgcact cgcccccgcc tgttccgtga
    16021 ttctgattac cggcgcgggc ggtatgttcg gcggcgtttt gcgcgcttcc ggcatcggca
    16081 aggcactcgc cgacagcatg gcggatttgg gcattcccgt ccttttgggc tgcttccttg
    16141 tcgccttggc actgcgtatc gcgcaaggtt cggcaaccgt cgccctgacc acagccgccg
    16201 cgctgatggc tcctgccgtt gccgccgccg gctttaccga ctggcagctc gcctgtatcg
    16261 tattggcaac ggcggcaggt tcggtcggtt gcagccactt caacgactcc ggcttctggc
    16321 tggtcggccg cctcttggat atggacgtac cgaccacgct gaaaacctgg acggtcaacc
    16381 aaaccctcat cgcactcatc ggctttgcct tgtccgcact gctgtttgcc atcgtctgac
    16441 agacggaaag gatagtaaat gactacgcat tttgtcgtta tgggcgtatg cggctgcggc
    16501 aagaccaccg ccgcgccgtc cctgcagaaa cacctcggtc aatgtcccta tgccgaaggc
    16561 gacgagttcc acacccaagc caaccgcgac aagatgggcg cgggtattcc gctgaccgat
    16621 gaagaccgct atccgtggtt gggcaatctg cgcgactgga tgacgcaaca ggcgcaaaac
    16681 ggcgcggacc acaccatcgt aacctgttcc gccctcaaac gcggctaccg cgacattctg
    16741 cgcggagccg aaggcaaagc cgccttcatc cacctcagtc cgccgcaaga catcaacctc
    16801 gaacgcatga tgtcgcgcaa agggcactac atgaaagcag ggatgctcga ttcgcaactg
    16861 gaaatcctcg aggaactggg cgaaggcgaa tacggggtca aaatcgccaa ccccggcacg
    16921 cccgaagcgg tcgaagccga tattctgaac tgggttgcct cggaaaacct gctttgaagc
    16981 aatatgccgt ctgaagcccg gcacaggatg ggtttcagac ggcataaaca tcgggaacag
    17041 aatgaattac attgatttaa aatggaaaat acccggctat cgtctcattt tcgttttaat
    17101 cagccataaa aatgccgtcc gaaacccttt cagacggcat ttctgtcaaa cgccggacgc
    17161 actcaatcca aactcaacag caggttgcgg aacgcgttcg ggtctttgat aaacgtcatc
    17221 tcgcccgcct gcggaaaatg aaaatccaac aggcgcgaca cccaaaaacg gatgcagccg
    17281 gcgcgttggg cggtcgggaa atacgccttt tccccggcac tcaaggggcg cacgccctca
    17341 taaccgccga caaacgcctt tttcaacgcc tcatccaact tattgtccgc cgtccttgcc
    17401 caatcgttga ccgcaatcgc caagtcatac ataaaattgc cccggcaggc ataatagaaa
    17461 tcgatgaagc ccgatacctg accgccgtca agcaacacat tgtctttaaa caggtcggcg
    17521 tggatgatgc ccgaaggcag atggttgccg agattgtcct tcagcgcatc gatttcggaa
    17581 cacagcagcg cggcatcgtc ttgcgacagg acgggcagca gccgggcgca cgcttccgtc
    17641 caccacgcat cgtaacgcgg gttttccatt tccaaaggga aatcggcggc ggcaaggtgc
    17701 attttcgcca acatcgcacc ggtatggaaa cactgctcag ccgtcggcag cgcggtatcc
    17761 gaacctttca ggcaggcaac caggcaggcc ggcttgcccg ccaaaacgga atcgagccgg
    17821 ccgtctttgc gcgcaaccgg cgcggcaacc gccacgccct tcatactcaa atgccggtta
    17881 agctccagaa aaaacggcag ctcttcctgt ttcaacactt caaacacggt cagcacataa
    17941 cgtcccgaag tcgtcgtcag aaaataattg ctgttggtaa tcccctgcgc aatgccctgc
    18001 agggaaacaa attcccccaa atcgtaaccg ctcaggaagc cgcgcatttc atcatcggaa
    18061 acactggtat agacagacat atcaactcac ttgctcaaaa acgggcaaac ccgccgtcag
    18121 aacgccggac ggcaggcaaa catataattc acatcggtcg aatcgcacag ggcataagtt
    18181 tgcgacaaca catggtaagt catacccttc gtatccgcca catccaagcc cgcctgacgg
    18241 cacatccgcg ccagctcggc aggcgagatg aattttttcc agtcgtgcgt acctttgggg
    18301 acaaacttca acagatattc cgccgccaca atcagatgca ggtacgattt cgggttttta
    18361 ttgatggtgg aaaaaaacac catgccgtcc ggcctgacca gcttggcaca ggcacgcacg
    18421 atggcggcgg gatcggggac gtgttccatc atttccatgc acgttaccac atcgaacgag
    18481 tgcggttccg ccccggcaag gtcttccacg cggacacatt cgtattcgat atcggcgaca
    18541 ttgttcaaag ccgcgtgcag gcgggcggtt tccagcgact gctccgccat gtcgatgccc
    18601 ttgacaaacg ccgcgccgcg ccgcgccatg ctttccgcaa ggatgccgcc tccgcagccc
    18661 acgtccaaaa cccgtttgcc gcacaaatcc gcgtgtccgt cgatataatc gagccggagc
    18721 ggattgatgt cgtgcaaggt tttgaactcg cccgacttgt cccaccattt gtcggcaatc
    18781 cggctgaatt tggcgatttc cccctcatcg acattatatt ttttgtcgga cattttccct
    18841 cccatctgac gaaccgccca ctccaaaacc caagattata ctatggaaca caatgccgtc
    18901 tgaaagcctt ttcgggcggc gcggcgcaaa tgccttacaa atccttacac tttacggcat
    18961 aatggcggct cgctttttct ggcagaaaga caaaatatgc ccaccaaaac cccttcactg
    19021 ttcggcggcg cgatgattat cgccggcacg gtcatcggcg caggtatgct cgccaacccg
    19081 accgccacat ccggcgtatg gtttaccggc tcgctggccg tgttgctgta cacctggttt
    19141 tctatgcttt ccagcggcct gatgattttg gaagtcaaca cccattatcc gcacggcgca
    19201 agtttcgaca cgatggtcaa agacctgctc ggacgcggct ggaacatcat caacggcatc
    19261 gccgtcgcct tcgttttata cctgctcacc tacgcctaca tcttcgtcgg cggcgacctg
    19321 accgccaaag gcatcggcag cgcagtaggc ggcaaaattt cgctcaccgt cggacaactc
    19381 gtcttcttcg gcatcctcgc cttttgcgta tgggcatccg cacgcttggt cgaccgcttt
    19441 accggcgtcc tcatcggcgg catggtatta acctttattt gggcaaccgg cggcctggtt
    19501 gccgatgcca aaccgtccgt cctcttcgac acccaagccc ccgtcggcac cggctactgg
    19561 atttacgccg ccaccgccct gcccgtctgc ctcgcttcct tcggcttcca cggcaacgtt
    19621 tccagcctgc tcaaatactt taaaggcgac gcgcccaaag tggcgaaatc catctgggca
    19681 ggtacgttgg ttgccttggt aatttacgtc ctctggcaaa ccgccatcca aggcaacctg
    19741 ccgcgcaacg agttcgcccc cgtgattgcc gccgaagggc aagtctccgt cctgattgaa
    19801 accctgtcca aattcgccca aaccggcaat atggataaaa tattgtccct attttcctac
    19861 atggcaatcg ccacctcgtt tttaggcgta accttaggcc tgttcgacta catcgccgac
    19921 atcttcaaat ggaacgacag catgtccggc cgcaccaaaa ccgccgcgct gaccttcctg
    19981 ccgcccctga tttcctgcct gctcttcccc accggcttcg ttaccgccat cggctgcgtc
    20041 ggcctggcgg caaccgtctg gacaggcatc atccccgcca tgctgctcta ccgttcgcgc
    20101 caaaaattcg gcgcaggcaa aacctataaa gtttacggcg gcttgtggct gatggtttgg
    20161 gtcttccttt tcggcatcgc caacatcgcc gcacaggtat tgagccaaat ggaactcgtc
    20221 cccgtattta aaggataaag gcaaaatgcc gtttgaaacc cgccggcggc ttcaggcggc
    20281 attgccgcaa caaacggcaa ccgtattccg gcacacagcg cattacccta ccccctcacg
    20341 cacaaatccc gccccgacag gcgcgggacg caaccataaa ggaacaatga tgaagctcaa
    20401 aatagacatt gcaaccaaca acttcaaaca cggcggcggc acggaacgct acacattgga
    20461 tttggtaaag ggtctgaaca gacaaaacat cacaccggcc gtttatgcga cgaaatttga
    20521 tcacggcatt cccgaatacg ccatgatcga accccatctt gtcgatcaac gccggacgct
    20581 gaaaaaacta cgctcgttcc tcttttcaag ccggctcgct caaaccagaa aaaacagtgc
    20641 cgccaaactg attgcctgcc accacgccga ttacgccgac ctcctcatct gcggcggcac
    20701 gcacttgggc tacctgcacc atatggcgca aaaaccgaac ctgctcgacc gcctcgccat
    20761 acgccgcaac cgcagcaact acgccaccgc caaactgatt gtggcgcatt cccatatgat
    20821 gcggcgcgaa ctggtcggac tatacggcgt tcc
//
LOCUS       DAXGCP010000030        20748 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.030, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000030 DAXGCP010000000
VERSION     DAXGCP010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20748)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20748)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20748
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.030"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(116..586)
                     /locus_tag="ACFJCW_000964"
     CDS             complement(116..586)
                     /locus_tag="ACFJCW_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151138.1"
                     /translation="MLRFLTERRFLPAGFQAWLFGTATRVLEAVSGLGLSGYAAVFAL
                     APDEIYAWRIYYKFQDIPEAWTVGVLAAAGLLQTALLFARGVRACVASAYLLLFSGFV
                     WFLVSVAFWGAYPPLNTGMVVPPLLAFFCALAGNNALRFLFSAQKSRGLADEGS"
     gene            complement(657..962)
                     /locus_tag="ACFJCW_000965"
     CDS             complement(657..962)
                     /locus_tag="ACFJCW_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151139.1"
                     /translation="MIEDKKIVALNFAVEDGMTGASAAYHVVEHIGADYRNGYVTATL
                     NGYVSENAFKSGKRYLLARTLDFQETDITAPDPGWVYRKALEGAAGIPKDAQPVYAE"
     gene            complement(1074..5219)
                     /locus_tag="ACFJCW_000966"
     CDS             complement(1074..5219)
                     /locus_tag="ACFJCW_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC4151140.1"
                     /translation="MGGKSSTVTSAEERILSLQVQRSSQGLTLPVIYGRTRVAGNLVW
                     YGDFVTIEHKTTTRRGGKGGGGVKQVGISYTYEAAVMLALCEGEIQGVGRVWRDKEKF
                     DSPAQLRLTLMRGGDEQPLWTHLQQAKHQGQALNYSGTAYLCSPNYELTKSAQIYQHN
                     FEVIGKSGYSGNIPDANPREIVLDLLTNQRYGCGFPSQNIGDTDRYSNYCRAVGIFLS
                     PAYTEQGEAQRNISELLEQTNSAAVFSQGRLKIIPYGDGSHSGNGAVYVADNKAAYDL
                     TDDDFIVSGAQDPVKAGRKTNADAFNQIQVEYLDRDNDYNVAIAEAKDQANIEQYGLR
                     PKDAVRMHGICDAKVAQKVAQQLLQRALYVRNEYEFKLGWKYCLLEPMDIVTLTDAGL
                     GLNKTPVRITEIEEDGEGVLSVKAEDCPAGVYTVSEYPTQPSSGYSADYNVSPGNAHV
                     PVIFEAPLQLTGGEPQIWLATAGGGMWGGAEVWVSADGDSYTRVGAVNRKARFGALTA
                     DLPDGAVFDRTNTLGVEISAGQLTGGTEQDSRDLLTLCYVDGEFLAYADAELKGVGRY
                     TLGNLTRGAYGSAVNAHAAGSRFARIDEALFKYAVPRNWIGRTVWVKLVSYNVFGGGI
                     QDLAEVPAYSYTIEGAPLGQIQNLRLTSSWAYGKEAVIAWDKLDGADTYDVEIYAGGS
                     RRRLRAVDGIVDNSYTYTQADMKADGGQVRGIVFKVRGRAVTGKTGNWAQIAAQNPQL
                     QALQGISIDSGLRQAFFTCQKPAEEDFAGIIVWVCENAACPAADANKAYDGAETFITI
                     AKCGGKPLEKGKTYYLRAAGYDSFGKDNLKISGSISFTVYDVSATDLSESSLNKALRD
                     KINLIDGNGAGSVNERVEAVRSTADGNAAAVQTHARSINGLEAQYTVKVDANGKVAGF
                     GLATTPKNGTPESKFIVNADRFGIGAAGKADVFPFVVDTQKNRVGINGELVVNGKAVV
                     DKLNAGDIHGGKIAADTLDANRLKAGSVTAREIGAAAVTADKIGANAVTADKIQVADL
                     SAVSSNLGSITGGSLNIGGGNFTVSSDGILTADNAVIRGRIEADSGYFNGTVRASSVE
                     GDVLRAHRLRWTEGNVWVLDLDKDPLPRVLIPNFYVVSETFGNNRVQAKLLLNGGVLA
                     PREVRETENYTNYIWRGRTFGRYEDLPHRARGGGDYTEQSGSRYRTRLEYQIQVIPAG
                     KPVSLKLSLASHESVFSPFVSVSYLAQSDYEYKQLLGRMVWRTFAESFRYDSKKQIYL
                     GGDRRVHDYQNQMYKHWNAYGGLLQLPDDIYGISFEYRPFTNADWSTMLAFDRSDKFV
                     VVKKYRGHAPQQYSLFQEEFNTAVPKSNLLFFVEHWWQYIELRNIRVLIPESRENEVW
                     QVG"
     gene            5459..5737
                     /locus_tag="ACFJCW_000967"
     CDS             5459..5737
                     /locus_tag="ACFJCW_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC4151141.1"
                     /translation="MESQTFASVFDALCDTPAEAANMRLRAGLMMHIADTVRENGWTQ
                     KQAAEHCGLTRPRINDLLNGKIDKFSLDALVNINAGLGQCISLSFAPA"
     gene            complement(5765..6196)
                     /locus_tag="ACFJCW_000968"
     CDS             complement(5765..6196)
                     /locus_tag="ACFJCW_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HFC4151142.1"
                     /translation="MPSETDLRARIVEEARSWLGTPYHHHAMVKGAGVDCAMLLVAVY
                     GAVGLLPEGFDPRPYPQDWHLHRDCERYLGFVTQFCRETESPQAGDIAVWRFGRSFSH
                     GGILAGGGKVIHSYIGRGVVSDDIGQAELIGRGVRFFTFSF"
     gene            complement(6198..7052)
                     /locus_tag="ACFJCW_000969"
     CDS             complement(6198..7052)
                     /locus_tag="ACFJCW_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2163 domain-containing protein"
                     /protein_id="HFC4151143.1"
                     /translation="MKAATKELIDLLHGGDEFQMADLYTITLSGGRVLRHTGADMPVV
                     WDGQAYGAHELVIKRGATRTAVGLEVDSNTLQISAAPDYRLEGLQWAEAALGGVLDGA
                     RVRIDRVFFDAGLRPVGAVNIFSGRVSDVSGGRSSVKVDVKSDIELLNVSSPRNIYQA
                     GCMRTLYDDGCKVNREKFTVNGRVTENSRTGTVLKHNLTQPDGWFSQGVIKFAGGRNA
                     GLSRTVKAHGGNTFELALRLPYPPQAGDAFKVYPGCDKRRDTCKDKFDNIVHFRGFPF
                     IPSADTVV"
     gene            complement(7049..7648)
                     /locus_tag="ACFJCW_000970"
     CDS             complement(7049..7648)
                     /locus_tag="ACFJCW_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2460 domain-containing protein"
                     /protein_id="HFC4151144.1"
                     /translation="MGNAVFPEFPGLKWGRKKTAVWSTGTQKSASGREFRTAYYTYPQ
                     WRFSLSFEVLRTKASVNELEKLAGFFNARKGSFESFLYEDPADNAVTDQPVGNTVQGV
                     ARYQLVRSMGGFIEPVSAVKERPAVKVGGTALAYGRDYTVTDKGVLVFNTPQPPGRPI
                     TWTGGFYFRVRFTSDTVDFENVLGSLWAAKKIEFTSVKL"
     gene            complement(7648..7914)
                     /locus_tag="ACFJCW_000971"
     CDS             complement(7648..7914)
                     /locus_tag="ACFJCW_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151145.1"
                     /translation="MIAHVCASTGWTWDYVADNLDLPRIKHLNEYWREHPPVHILAAS
                     YMGVKPSSGSVQSEADEAEAVGMLGGGELSEDEFDALLKAKGII"
     gene            complement(7926..8255)
                     /locus_tag="ACFJCW_000972"
     CDS             complement(7926..8255)
                     /locus_tag="ACFJCW_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151146.1"
                     /translation="MTVRIKGVTVELNGADYVIPPIALGALEQLQERIGSFDGNAADA
                     GQISTVIDCAHAALKRNYPDLTREEAADLIDIGNMNEVFAAVMDVSGLKRREQEAAQA
                     GEARAAD"
     gene            complement(8316..9089)
                     /locus_tag="ACFJCW_000973"
     CDS             complement(8316..9089)
                     /locus_tag="ACFJCW_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151147.1"
                     /translation="MQLTFGSGEVFAQMITDAYGNRVQNATPVRIMGLQEMSVDLSAE
                     LKEFYGQNRYPLAVAQGKVKVSGKMKGALINGLTLNTLFFGTEYATGTMKALWAETTG
                     KVLDGDNYSYLQAAAPGGGKFAEDAGVMGQDGTAYIKVASSPKQGQYTVSESGVYAFN
                     SSDKGKTVYPSFTYTQTMPPAKKIELTNMATGNTPTFKMRYLTQFKGKKALLELESVT
                     SGKLGLFSTKNDDFSVPEIDFTASTDEAGFKIGTLWIQE"
     gene            complement(9115..9543)
                     /locus_tag="ACFJCW_000974"
     CDS             complement(9115..9543)
                     /locus_tag="ACFJCW_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151148.1"
                     /translation="MNREAVYSALWAKLDALDGFVTKSRKLVHWNDVKRYDQPALFMA
                     QGDMQALTLTGRETKWILRADVYLYVQTAGQPPAPVMNPLIDAVCNAVNAVHPVTGKT
                     DLTADGADIEYCRVEGTVETDEGTLGEQAVCIIPIVICAA"
     gene            complement(9540..10022)
                     /locus_tag="ACFJCW_000975"
     CDS             complement(9540..10022)
                     /locus_tag="ACFJCW_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HK97 gp10 family phage protein"
                     /protein_id="HFC4151149.1"
                     /translation="MLKMEFIGGGILAAVFKAYAADVQDAVVKSVGRSALRLQREVKQ
                     NRLSGRVLRVRTGNLRRSVHQRVNVSGNVVSGEVDTNVRYGIAHEYGFAGSVNVKASL
                     RQVRQAFGKPLKPPRYVRVRAHTRDVKLPERSFLRSALRDLTPKFADDLQKSIGKVLK
                     "
     gene            complement(10022..10552)
                     /locus_tag="ACFJCW_000976"
     CDS             complement(10022..10552)
                     /locus_tag="ACFJCW_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="head-tail connector protein"
                     /protein_id="HFC4151150.1"
                     /translation="MAAPVSLEEFKQRIGVEHDRRDDFFLSVIDGVSAAAEAYIGRSL
                     LAADYVGRYDGNGKDRIVLDNYPVLSVSSVKINGADAGGWEFDNWLLMRPEGFARGLK
                     NVEVSYRAGYERMPADIREAVMIIAVQRVNEIEGKGVRSKTLAGETVAFSTFGNSGGM
                     PPSAFAILNEYKRKGV"
     gene            complement(10555..10917)
                     /locus_tag="ACFJCW_000977"
     CDS             complement(10555..10917)
                     /locus_tag="ACFJCW_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151151.1"
                     /translation="MPSENQTAFSFGDFEMTVKLKAPEGFTDVSFGSQSYAADENGIV
                     EVPSEAAEFLYQFGFGNVASEPAEGPEKAKRGRKPKTGQPAGQSEPAEAAEPAEAEAE
                     AAEPAEAEAEPAEAEKAE"
     gene            complement(10924..12423)
                     /locus_tag="ACFJCW_000978"
     CDS             complement(10924..12423)
                     /locus_tag="ACFJCW_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151152.1"
                     /translation="MNVNQLTQETIELMKSAQAGGGPPDKGFTQPAGFTAGLQTYDLS
                     APSQKLYPVLTPLRNRIPRVGGGRTIGSNWKAVTNINVGNQRAGIGEGRRGGVINHET
                     VERNAQFRAIGLENQVTFEADYAARGFEDVKALAVAQTLQATMVAEEMILLGGNTSLK
                     AGVTPTPTAVVSADAAGKISVSTLSVICVALGLQAYWDVAGANNGATGQSPNIKTAQV
                     PAKITRRNADGTTDTFGGGSARKSAAASVSGIEAGKKVTAVIPAVRGAVAYAWYWGAA
                     GSEKLGAVTTAAKVEISADAEGTQTAASLPSEDNSTSILEFDGLLTQIALPDSGAFWS
                     DNKGGGLTSDNAGGVYEFEEAFAHFFTRYRLSPDTVYVNARDLAALTKLIIGNSGAPL
                     IKLNVDVNNTANIRAGVVVGSYMNKITGDDLNIVVHPNLPAGTYLFYSSRLPAYVQGV
                     GNLLQVRTRQEYYQIEWPLRTRMYEYGVYADEVLQGMFMPAFGMITNVG"
     gene            complement(12465..13622)
                     /locus_tag="ACFJCW_000979"
     CDS             complement(12465..13622)
                     /locus_tag="ACFJCW_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="caudovirus prohead protease"
                     /protein_id="HFC4151153.1"
                     /translation="MTKLYAQIAKTEAQDDGTVKVWGYASSEAVDSDGEVVAAEAMKA
                     AIPDYMKFGAVREMHGSNAAGTAIEINVEDDGRTFFGAHIVDPVAVTKVKTGVYKGFS
                     IGGSVTARNDLNKSQITGLKLTEISLVDRPANPDAVFTCFKADKPKDEAGAADKDGKP
                     SDKPTEEEDENPKDGDKGPKTEDKGDKDAGKKDEAGKSASVELSESEIAALKAVLAKA
                     DKPKGGTAAKSMYQVKSPADVLMSLKWLVEDASYDNIDEAVTAQIKESAAGLAESLKA
                     LAASEADKPADGLAAKAGKSGDLAKAESADELAKAQDALKKSNDALAKAQAEIESLKK
                     QAVPPKGSTKAISKAEDNGEDPLKGFQPIVKNDGTLDDVATLIKAKQTGRL"
     gene            complement(13690..15837)
                     /locus_tag="ACFJCW_000980"
     CDS             complement(13690..15837)
                     /locus_tag="ACFJCW_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HFC4151154.1"
                     /translation="MSKKTPLSQGFIARVAAGVRYAFTGNADGWFDAGEPPAPAAQQA
                     EGRRFDYEPFYNVGHSKPREREAVGFAQLRALADNYDVLRLVIEARKDQMECLKWTIQ
                     KRDVESTEDDESQRKDRKVDEAVAFFRSPDKEHTWADWLRILLEDLFVIDAPCIYPRK
                     TLGGGLYALEVMDGATIKRVLDNTGRMPLPPDTAYQQILHGMAAVDYTADELIYRSRN
                     NRSYKVYGYSPVEQIIMTVNIALKRQVHALEYYTAGSVPDALVGVPETWSADDIRRFQ
                     EYWDLLLSGETAQRRKMRFVPGELSRNFRETKQPPLKDVYDEWLARVVCFAFSVEPTP
                     FVAQVNRSVAETSREQSLSDGMGSLKNWVKALIDDVLARYMDMAAYEFVWKGEESLNP
                     KEQAEIYAIYKNAGILTADEIRAELGKEPLPGQGQPEPDKQDGRKPEEPPNQGAEKLG
                     KSESPMSEDESAALIEAYLLTRIDGLAEQIAALIEGAAVDWQAGDLAAELSRAAGVVA
                     NGLDFGDWSGLSDVVEPIIRRVAEDGAVAALLRVMPEPAAGMVTNIRSRAVKWAHERA
                     AEMVGMKRAGGGLVRNPAAEWQITEGTREMIRAQVAEAMRNGDSVQELAGRLKESHAF
                     GNARARTIARTETAMADGMGNLIGWEGTGLVAGKQWITAKDDKVSDVCNANGGMGVIG
                     LHEPFSHGALTIPGHPNCRCAVVPVLAGDMPES"
     gene            complement(15834..17255)
                     /gene="terL"
                     /locus_tag="ACFJCW_000981"
     CDS             complement(15834..17255)
                     /gene="terL"
                     /locus_tag="ACFJCW_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HFC4151155.1"
                     /translation="MALGQFDDVETSVIRSLSSASLYMFTRRMFYQRRGYVWQRANHH
                     APICNALERVFNGETKRLIINIPPRYSKTEIAVVNFIAWAMGRVPDCEFIHASYSAAL
                     AVNNSVQIRNLVQHEEYRAIFPDLALAGESGHHWKTTAGGVMYATGAGGTITGFGAGR
                     HREGFGGCIIIDDPHKADEARSEVRRQNVIDWFQNTVESRKNSPDTPIILIMQRLHEK
                     DLAGWLLDGGNGEEWEHLCLPAIQEDGTALWPEKHDIETLRRMEQAAPYVFAGQYLQR
                     PAPPDGGTFKPDNLQFVKALPAGNIRWVRAWDLASTANGGDYTAGGRLGVTEDGRYII
                     ANVVRGRYGADERDRILRNTAQKDGVKTKISIPQDPGQAGKSQTLYLTRQLAGFSVSA
                     GPESGDKVTRAGPFAAQVNIGNVMVLDDGTWDTDALIAEMRMFPNGRHDDQIDCLGRA
                     FGELLDTRTGMIDFLRSQVEAVK"
     gene            complement(17317..17766)
                     /locus_tag="ACFJCW_000982"
     CDS             complement(17317..17766)
                     /locus_tag="ACFJCW_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151156.1"
                     /translation="MSGTKRKLGRPTDYTKDMADKICEKIANGRSLRSICAEDGVPPM
                     KTIYRWLEANEEFRHQYARAREKQADYFAEEIIEIADSAQAESAAVSKAKLQIDARKW
                     AASKIAPKKYGDKSELDVKSGDGSMRAAVRLDAEEYRKIAEDVLRRV"
     gene            complement(18059..18928)
                     /locus_tag="ACFJCW_000983"
     CDS             complement(18059..18928)
                     /locus_tag="ACFJCW_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC4151157.1"
                     /translation="MNVIQSFNFNTTSPVRAFEKDGLTWFVAADVCKALEIQNPTQAL
                     EKLDDDERSMFNIGRSEIHGGGGNVNIINESGLYILILRSRKAMEQGSTAWKFRKWVT
                     SEVLPTIRKTGGYQVGQKTTADDRTGLRRAVAALVGRKGIDYSSAYSMIHQRFNVEAI
                     EDIPAGKLPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALYDLAVAVSYG
                     ARAIQMGRDVSLPLKQLGCRQAVTMWTVWAETRSRLKAAANALEALSAHADAEHAEKI
                     RPILPEIRNLSAV"
     gene            complement(19207..20166)
                     /locus_tag="ACFJCW_000984"
     CDS             complement(19207..20166)
                     /locus_tag="ACFJCW_000984"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151158.1"
                     /translation="MAYINILAGDFHKGKAVLKKDCIVLSRGGKVALLDIAGYEVQDG
                     GVIEVVFFDGRRMLVEKNDAFLQAVKVALYNEPQNPEERRQQYNQRQVNSAAKAKKAK
                     KIKLIVGGIFVLLFVAMCAVPKKELTPEEKAAAEKQKIDGKIASGVREFKYDKKAYPK
                     LYKQWGEKAVNEMNGYLPRIAEHIAREDSCDAVETVDISDSRSNPKAKQMVFFVDCRN
                     GKRFFVSTDDLNSGRKSTAEQDKKIDSSAVISQCDEAIKAQLNHPRTFDPHILDTATG
                     VNQNGNVLVTRGFTAKNGLGMQIDYRAYCVITDNKVEVSIEQK"
     gene            complement(20227..20634)
                     /locus_tag="ACFJCW_000985"
     CDS             complement(20227..20634)
                     /locus_tag="ACFJCW_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151159.1"
                     /translation="MNQQEFEFMNDLARAFERRYRDTRSLNRCLSIEGRYMGEEVCPH
                     KPEIGLRYGEDAMFLTLQAWAKVDAPQQEAVRISFGIGAKSQAAYEERLQAEIRRRGE
                     GPLHLQTDLGLAAWYGAIRQAAGDDFDLLFEKV"
BASE COUNT         4333 a         6422 c         5249 g         4744 t
ORIGIN      
        1 taaaagcctc cagcacagcc tgcacggggc ggccgcgttc ctgaaggctt gcccacaccg
       61 cgcccagcac gccgccggcc gcggcaaaca gcagtccgaa ctgcaagaac cccattcacg
      121 acccctcatc cgccaaaccc cgcgactttt gcgccgaaaa caaaaacctc aacgcattat
      181 tccccgccag cgcgcagaaa aacgccagca gcggcggaac gaccataccc gtgttcaaag
      241 gcgggtacgc cccccaaaac gccaccgaaa ccaaaaacca cacaaagccc gaaaacaaaa
      301 gcaggtaggc cgaagccaca caagccctca cgccccgcgc aaacagcaat gccgtctgaa
      361 gcagccccgc cgccgccagc acccccaccg tccacgcctc cggaatatcc tggaatttgt
      421 aataaatccg ccacgcgtaa atctcgtcgg gcgcaagcgc gaacaccgcc gcgtaacccg
      481 acaagcccaa accgctgacc gcctccagca cccgcgtcgc cgtgccgaac aaccacgcct
      541 gaaacccggc gggcaaaaac cgccgttccg tcaaaaacct caacataccc gtcacacacc
      601 ccccggcaaa acaccgcgaa gccgaagccc cgcagtgtcc gacgccgtct gaaaacttat
      661 tccgcgtaaa ccggttgcgc gtctttgggg atgcccgccg caccttccaa cgccttgcgg
      721 tacacccaac cggggtcggg cgcggttatg tccgtttcct gaaaatccaa tgtgcgcgcc
      781 aacaggtagc gtttgcccga tttaaacgca ttttccgaca catagccgtt caacgtcgcc
      841 gtaacataac cgttgcggta atccgcgccg atatgttcga cgacgtggta ggccgcactc
      901 gcgccggtca taccgtcctc gactgcaaaa ttcaaggcaa caatcttttt atcttcaatc
      961 atttcaaatc tccaaaagcc cgctaggggc gggaacgaaa atgccgtccg aggtcttcag
     1021 agggcattgc ccggacaaaa caggaaaaac ccaaacggcg gcatacgggg gcgtcagcca
     1081 acctgccaaa cctcgttttc gcgcgattcc ggaatcagca ccctgatatt gcgcagctcg
     1141 atatactgcc accagtgttc cacaaaaaac agcaggttgg atttcggaac ggcagtatta
     1201 aactcctcct gaaacagaga atactgttgg ggcgcatgac cccggtattt cttaaccact
     1261 acaaacttat ccgaccggtc gaacgcaagc atcgtactcc agtcggcatt ggtaaaaggc
     1321 cggtactcga acgatatgcc gtagatatcg tccggcaact gaagcagccc gccgtaagca
     1381 ttccaatgtt tatacatctg attttggtaa tcgtgtacac gccggtcgcc gcccaaataa
     1441 atctgcttct tactgtcgta ccggaaactt tccgcaaagg tgcgccaaac catcctcccg
     1501 agcagctgct tgtattcgta gtcggattgc gccaaatacg aaaccgacac gaacggcgaa
     1561 aacaccgatt cgtgggaagc gagcgacaac ttcaggctga cgggtttgcc cgcggggatg
     1621 acttgaatct ggtactcgag gcgggttctg taccttgagc cggattgttc ggtataatcc
     1681 ccgccccccc ttgcccggtg gggcaggtct tcgtacctcc cgaaagttcg gccgcgccaa
     1741 atataattgg tatagttctc ggtttccctg acttccctcg gcgcaagcac acccccgttc
     1801 aacagcagct ttgcctgcac cctgttgttg ccgaacgttt ccgaaaccac ataaaaattc
     1861 ggaatcaaaa ccctcggcag cgggtcttta tccaaatcca acacccaaac gttaccctcc
     1921 gtccaacgca gcctgtgcgc cctcaacacg tcgccctcga cggacgaagc cctgaccgtg
     1981 ccgttgaaat aacccgaatc ggcctcaatc cggccgcgta ttaccgcatt gtcggccgtc
     2041 aggatgccgt ctgaagacac cgtaaaatta cccccgccga tattcaggct gccgcccgtg
     2101 atgcttccga gattggaaga taccgcgctc aaatcggcaa cctgaatctt atcggcagtc
     2161 accgcgtttg ccccgatttt atcggcggta acggcggcag ccccgatttc ccgcgccgta
     2221 acgcttccgg ctttcaggcg gtttgcgtcc agcgtgtccg ccgcgatttt gccgccgtgg
     2281 atatccccgg cgttcaactt atcgacaacc gccttgccgt tgaccaccaa ttcgccgttg
     2341 atgcccacgc ggtttttctg cgtgtccacc acgaacggga acacatccgc cttcccggcc
     2401 gcaccgatgc cgaagcggtc ggcattcacg ataaacttgc tttcgggcgt gccgtttttc
     2461 ggcgtagtcg ccaagccgaa gcccgccact ttgccgtttg catcaacctt gaccgtgtat
     2521 tgcgcctcca agccgttgat gcttcgggcg tgtgtctgaa ccgccgccgc attgccgtcc
     2581 gccgtcgatc ggactgcctc gacgcgctcg ttgacgctgc ccgcgccgtt gccgtcaatc
     2641 aggttgattt tgtcgcgcaa agccttgttc agactgcttt ccgacaggtc ggttgccgat
     2701 acgtcgtaaa cggtaaacga tatgctgccg ctgattttca ggttatcttt gccgaaactg
     2761 tcgtaacccg ccgccctcaa gtaataggtc tttcctttct ccagcggttt gccgccgcat
     2821 ttggcgatgg ttataaacgt ttccgcgccg tcataggctt tgtttgcgtc cgcggccggg
     2881 caggctgcgt tttcgcaaac ccagacgata atccctgcaa agtcttcttc ggcaggtttt
     2941 tggcaggtaa aaaacgcctg gcgcaggccg ctgtcgatag agatgccctg caatgcctgc
     3001 aattgcggat tttgcgccgc gatttgcgcc caattgcccg ttttaccggt aacggcacgc
     3061 ccgcgaacct tgaagacaat accgcgtacc tggccgccgt ccgccttcat atccgcctga
     3121 gtgtaggtgt agctgttgtc aacgatgccg tcaaccgcac gcagacggcg tcggctgccg
     3181 cctgcgtaga tttccacgtc gtaggtatcc gcgccgtcca atttatccca agcgatgacg
     3241 gcttctttgc cgtatgccca cgatgatgtc aggcgcaggt tttggatttg accgagcggc
     3301 gcgccttcga tggtgtagga atacgccggc acttccgcca aatcctgaat gccgccgccg
     3361 aaaacgttgt acgaaaccag tttgacccaa accgtgcggc caatccagtt gcgcggcacg
     3421 gcgtatttga acaatgcttc gtcgatgcgc gcaaaccggc tgcccgccgc gtgtgcgttg
     3481 acggcggagc cgtacgcgcc gcgcgtcagg ttgcccaatg tgtagcgtcc cacgcccttc
     3541 agttcggcgt cggcgtatgc cagaaattcg ccgtcgacgt agcacaatgt cagcaaatcg
     3601 cggctgtcct gctccgtgcc gcccgtcagc tgccccgccg aaatttccac gcccaacgta
     3661 tttgtgcggt cgaaaaccgc gccgtcgggc aaatcggcgg tcagcgcgcc gaaacgcgcc
     3721 ttgcggttga ccgcgccgac gcgggtgtag ctgtcgccgt ccgccgatac ccacacttcg
     3781 gcgccgcccc acataccgcc cccggcggtt gccagccaga tttgcggttc gccgcccgtc
     3841 agttgcaacg gcgcttcgaa aattaccggc acatgggcgt tgcccggcga aacgttgtag
     3901 tcggccgaat aacccgaaga cggctgcgtc ggatattccg acacggtata aacaccggcc
     3961 gggcagtctt cggccttgac ggataaaacc ccttctccgt cttcttcgat ttccgtaatg
     4021 cggacgggcg ttttattcag gccgagcccc gcgtcggtca gggttacgat gtccatcggc
     4081 tcaagcaggc agtatttcca acccagctta aactcatatt cgttgcgcac gtacagggcg
     4141 cgttgcagca gttgttgcgc cactttttgc gccaccttcg catcgcaaat gccgtgcatc
     4201 ctgaccgcgt ctttcgggcg caatccgtac tgctcgatat tcgcctggtc tttcgcttcg
     4261 gcgatggcga cgttgtagtc gttgtccctg tcaaggtact cgacctgaat ctgattaaac
     4321 gcatcggcat tggttttgcg cccggccttt acagggtctt gcgcgcccga aacgatgaaa
     4381 tcgtcatcgg tcaggtcgta ggcggcctta ttgtcggcaa cgtacaccgc gccgttcccc
     4441 gaatggctgc cgtccccgta ggggatgatt ttcaggcggc cttgcgaaaa taccgccgcg
     4501 ctgttggtct gctccagcag ttcggaaata ttccgttgcg cctccccctg ttccgtgtag
     4561 gcagggctta ggaaaatccc gacggcgcgg caataattgc tgtaccggtc ggtatcgccg
     4621 atgttttggg acgggaaacc gcagccgtag cgttggttcg tcagcaaatc caatacgatt
     4681 tcgcgcgggt ttgcatcggg gatgttgccg gaatagcccg atttcccgat gacctcgaaa
     4741 ttgtgctgat atatctgcgc cgatttcgtc agttcgtagt tcgggctgca caaataagcc
     4801 gtgcccgaat aattcaaggc ttggccttgg tgcttcgcct gttgcaggtg cgtccacaac
     4861 ggctgctcgt cgccgccgcg cataagcgtc aggcgcaact gtgccggcga atcgaatttc
     4921 tccttgtcgc gccaaacccg ccccacgccc tgaatctcgc cctcgcacaa agcaagcatg
     4981 acggcggctt cgtaggtata ggaaataccg acctgtttca caccgccgcc gcccttgccg
     5041 ccccggcgcg tcgtagtttt atgctcgatg gtgacgaaat cgccgtacca caccaaatta
     5101 ccggctacac gcgtcctgcc gtagatgacg ggcagggtca gcccctgtga tgaccgctga
     5161 acctgtaacg ataaaatccg ctcttcggca gatgtaacgg ttgacgattt accacccata
     5221 aaaccacctc gaaacttgca aaaattatca aaatcgatat aatttactta tatcaaaaca
     5281 gatataaaat atgaaaccgt taaatttttc aggcggttca ttggattgcc tgcggcaatt
     5341 ccccgaaaac gccaaacagg cggcaggtta tcaacttcaa gaaaagccgg aaaaccgcgg
     5401 gcgccgattc ggaatcggcg gaaaaacgtt acaacaaatt gattcgggaa aagaaataat
     5461 ggaaagccaa actttcgcct ccgtatttga cgcactgtgc gacacgcctg ccgaagccgc
     5521 caatatgcgg ttgcgcgccg gcctgatgat gcacatcgcc gataccgtcc gcgaaaacgg
     5581 ttggacgcaa aaacaggccg cagaacattg cggcctgacc cggccgcgca tcaacgacct
     5641 gctgaacggg aaaatcgaca aattttcatt ggatgcgctc gtaaacatca atgccggact
     5701 cgggcagtgc atttccttat ccttcgcccc cgcgtaaagc ccgtcctttc agacggccgc
     5761 aaaatcaaaa tgaaaatgta aaaaaccgaa ccccgcgccc gataagttcg gcttggccga
     5821 tgtcgtccga caccacgccg cgcccgatgt agctgtgaat aaccttgccg ccgcccgcca
     5881 atatgccgcc gtgcgaaaac gaccgcccga aacgccatac tgcaatgtcg cccgcctgcg
     5941 gcgattccgt ttcacggcaa aattgcgtga cgaaccccaa ataacgctcg caatcgcggt
     6001 gcagatgcca atcttgaggg taagggcgcg ggtcgaaccc ttcgggaagc agtccgaccg
     6061 ccccgtagac ggcgaccagg agcatcgcgc aatcaacacc cgcgcccttg accattgcat
     6121 gatgatggta cggcgtgcca agccacgacc gcgcctcttc gacgatccgc gccctcaaat
     6181 ccgtttcgga cggcatatca caccaccgta tctgccgaag ggatgaacgg gaagccgcga
     6241 aaatgcacga tattgtcaaa cttatccttg caggtatcgc gccgcttgtc gcagcccgga
     6301 taaaccttga acgcatcgcc cgcctgcggc gggtagggca ggcgaagggc aagttcgaac
     6361 gtgttgccgc cgtgtgcctt gaccgtcctg ctcaaacccg cgttgcgccc gcccgcaaac
     6421 ttaatcacgc cctgcgaaaa ccagccgtca ggctgcgtca gattgtgctt cagcacggtt
     6481 cccgtccggc tgttttcggt tacgcgcccg tttaccgtga atttctcacg gttgaccttg
     6541 cagccgtcgt catagagcgt cctcatgcag cccgcctgat aaatgttgcg cgggctggaa
     6601 acgttcaaaa gctcgatgtc ggatttcacg tcaaccttca cggacgacct gccgcccgat
     6661 acgtccgaca cgcgccctga aaaaatattc accgcaccga cggggcgcag tccggcatca
     6721 aaaaacacac ggtctatcct gacccgcgcg ccgtccaata cgccgcccag ggcggcctcc
     6781 gcccattgca ggccctcaag cctgtaatcg ggcgcggctg aaatctgcag ggtgttggaa
     6841 tccacttcca atccgacggc ggtacgggtt gcgccgcgct tgataaccag ctcgtgcgcc
     6901 ccgtaggcct gaccgtccca aacgacgggc atatccgcgc cggtatgccg cagcacccgg
     6961 ccgcccgaaa gcgtaatggt gtacaaatcc gccatctgaa actcgtcgcc gccgtgcagc
     7021 aaatcaatca gttcttttgt cgccgccttc atagtttcac actcgtaaac tcaatctttt
     7081 tggccgccca caagctgccc aaaacgtttt caaaatccac cgtgtcagac gtaaacctca
     7141 cgcggaaata aaagccgccc gtccatgtga tcgggcggcc cggcggttgc ggcgtgttga
     7201 aaaccaaaac gcccttgtcg gtaacggtgt aatcgcgccc gtacgccaac gccgtgccgc
     7261 cgaccttgac ggcgggccgt tccttgaccg ccgacacagg ctcgataaat ccgcccatcg
     7321 aacggacaag ctgataacgc gcaacgccct gcaccgtgtt tccgacaggc tggtcggtta
     7381 cggcgttgtc ggccgggtct tcgtaaagga aactttcaaa gctgcctttg cgcgcgttga
     7441 agaatcccgc cagtttttcc aactcgttta cggacgcctt tgtccgcaat acctcgaacg
     7501 acagcgaaaa ccgccattgc gggtaggtgt agtaggcggt tcggaactca cggccgcttg
     7561 ccgatttctg cgtaccggta ctccataccg ccgttttctt ccgcccccac ttcaagccgg
     7621 ggaactcggg gaaaaccgca ttgcccatca gatgattcct ttcgctttga gcagtgcgtc
     7681 aaattcgtct tcggacagtt cgccgccgcc aagcataccg acggcttcgg cttcgtccgc
     7741 ttcgctttgc acactgcccg acgacggctt gacgcccata tacgacgctg ccaagatatg
     7801 cacgggcgga tgttcgcgcc aatactcgtt caggtgtttg atacgcggca aatccaagtt
     7861 gtcggcgacg tagtcccacg tccagccggt agaggcgcaa acgtgggcaa tcaccgcgcc
     7921 gaaacttaat ccgccgccct ggcctccccc gcttgtgcgg cttcctgctc cctgcgtttc
     7981 aagcccgaaa cgtccatcac ggcggcaaac acttcgttca tgttgccgat atcgatcaaa
     8041 tcggccgctt cttcgcgcgt taaatccggg taattgcgct tcagggcggc gtgggcgcaa
     8101 tcgataacgg tagagatttg tccggcatcc gccgcattgc cgtcaaatga gccgatgcgc
     8161 tcctgcaact gctccaacgc gcccagcgca ataggcggaa tcacataatc cgcgccgttc
     8221 agttctacgg ttacgccttt aatccgtacg gtcattttta tttccttgac tttggttgaa
     8281 taaaaaaagc cgccttttca gacggcatat aaacattact cctgaatcca cagcgtaccg
     8341 attttaaagc ccgcctcgtc ggttgaggcg gtaaagtcga tttcggggac ggagaagtcg
     8401 tcgtttttag tcgagaacaa gcccaatttg ccgctggtta cgctttccag ttccaacagg
     8461 gcttttttgc ctttgaactg cgtcaggtac ctcatcttaa acgtcggcgt gttgcccgtc
     8521 gccatattgg tcagctcgat tttcttcgcc gggggcatcg tttgcgtata ggtaaagctc
     8581 ggataaacgg ttttgccttt atccgagctg ttaaaggcgt acacgcccga ttccgaaacc
     8641 gtatattggc cttgtttcgg ggaggatgct actttgatat aagccgtgcc gtcctggccc
     8701 atcacgcccg cgtcctcagc gaacttgccg ccgccgggcg cggctgcctg aaggtaagaa
     8761 taattgtcgc catcgaggac tttgcccgta gtttccgccc aaagcgcctt catcgtgccg
     8821 gttgcatatt ccgtaccgaa aaacagggta ttgagggtca ggccgttaat caacgcgcct
     8881 ttcattttgc ccgacacctt gaccttgcct tgcgccacag ccaaaggata acggttttga
     8941 ccgtagaact ctttcaattc cgccgacaaa tcgacggaca tttcctgcaa gcccataatc
     9001 cgcacgggcg ttgcgttctg tacacggttg ccgtaagcat ccgtaatcat ttgggcgaac
     9061 acttcgccgc tgccaaacgt caactgcatg acatcccttt caaaaaaagc cgcattacgc
     9121 ggcgcaaatc acaatcggaa taatacaaac cgcctgttcg ccaagcgtcc cctcgtcggt
     9181 ttccaccgta ccctcgacgc ggcaatactc gatatccgcg ccgtccgccg ttaaatccgt
     9241 cttgcccgta acggggtgga cggcgttcac ggcattgcac accgcgtcaa tcagcggatt
     9301 catgacgggc gcgggcggtt ggcccgccgt ctggacgtac aggtaaacat cggcgcgcaa
     9361 aatccacttg gtctcccgcc ccgtcaatgt caacgcctgc atatcgccct gcgccataaa
     9421 taacgcgggc tgatcgtagc gtttcacatc gttccagtgc accagcttcc ggctcttggt
     9481 tacgaagccg tccaatgcgt ccagcttcgc ccacagcgcg gaataaaccg cctcacgatt
     9541 catttcaaca cctttccaat cgatttttgc aggtcgtccg cgaacttcgg cgtcaaatcg
     9601 cgcaatgccg aacggaggaa cgaccgctcc ggcaacttca catcacgggt atgggcgcgg
     9661 acgcggacat atcgcggcgg tttcagcggc ttgccgaacg cctgcctgac ctggcgcagc
     9721 gaagccttaa cgttgacact gcccgcgaaa ccatactcat gcgcgatgcc gtaacggacg
     9781 ttcgtatcga cttcgcccga aacgacattg ccggaaacgt tcacgcgctg gtgtacggag
     9841 cgtcgcaggt tccccgtcct taccctcagc acccggcccg ataaccggtt ctgcttgact
     9901 tcgcgctgca ggcgcaatgc cgacctgccc accgatttga cgaccgcatc ttgaacatcg
     9961 gcggcatatg ctttaaaaac cgccgccaga ataccgccgc cgataaattc catcttcagc
    10021 atcacacgcc ctttcgtttg tactcattga gtatcgcaaa cgccgacggc ggcataccgc
    10081 cggaattacc gaacgtagaa aaagcgacgg tttcgcctgc aagcgtcttg ctccgtacgc
    10141 ccttgccctc gatttcgttc acgcgctgca ccgcgataat catcaccgct tcgcgtatgt
    10201 cggcgggcat gcgctcataa ccggcgcggt acgatacctc gacatttttc agcccgcgcg
    10261 cgaaaccttc ggggcgcatc agcagccagt tgtcaaactc ccagccgccg gcatccgcgc
    10321 cgttgatttt gacggacgac accgacagga cgggataatt gtccaacacg atgcggtctt
    10381 tgccgttgcc gtcgtaccgc ccgacataat cggcggccag gaggctgcgc ccgatatagg
    10441 cttccgccgc cgccgacacg ccgtcaatga cgctgaggaa gaaatcgtcc cgccggtcat
    10501 gttcaacgcc gatacgctgc ttgaactcct caagcgatac cggggcggcc atcgttattc
    10561 agccttttcg gcttcggcag gttcggcttc tgcttcggca ggttcggcag cttcggcttc
    10621 ggcttcggca ggttcggcag cttcggcagg ttcggattgt cctgccggct gcccggtttt
    10681 aggtttacgc ccgcgcttgg ctttttcagg cccttcggca ggctcggagg caacgttgcc
    10741 aaaaccgaac tgatacagga attccgccgc ctccgacggc acttccacga taccgttttc
    10801 atctgccgcg tagctttggc tgccgaagga aacgtcggta aacccttcgg gcgcttttaa
    10861 tttgactgtc atctcaaaat ctccaaaaga aaaagccgtc tgattttcag acggcatatc
    10921 ggcttaaccc acgttggtaa tcataccgaa ggcaggcatg aacatacctt gcagcacctc
    10981 gtccgcatag acgccgtatt cgtacatacg ggtgcgcagc ggccattcga tttggtaata
    11041 ctcttggcgc gtacgcactt gcagcagatt gccgacgccc tgaacgtagg cgggcaggcg
    11101 gcttgagtag aacaggtaag taccggcagg caggttcggg tgtaccacga tgttcaggtc
    11161 gtcgcccgtg atcttgttca tatacgaacc gacaacgaca ccggcgcgga tgttcgccgt
    11221 attgttcacg tcaacgttca acttaatcaa cggcgcgccg ctgtttccga taatcagctt
    11281 ggtcagcgcc gccaaatcgc gggcgttgac gtagacggta tcgggggaca ggcggtatcg
    11341 ggtaaagaaa tgcgcgaacg cctcttcaaa ttcatacacg ccgcccgcgt tgtcggaagt
    11401 caggccgccg cctttgttgt ccgaccagaa cgcgcccgaa tcaggcaggg cgatttgggt
    11461 caacaggccg tcaaattcca aaatagaagt ggaattgtct tcggacggca gggaagcggc
    11521 ggtctgggta ccttcggcat cagccgaaat ttccactttg gcggcagtgg taaccgcgcc
    11581 cagtttttca gaaccggccg caccccagta ccaagcatag gcaaccgcgc cgcgaacagc
    11641 cggaatcacg gcggttactt ttttgcctgc ctcaataccg gaaacggaag ccgccgcaga
    11701 ttttcgggcg gaaccgccgc cgaacgtatc ggttgtacca tccgcgtttc ggcgtgtgat
    11761 tttggcaggg acttgggcag ttttaatgtt cgggctttga ccggttgcac cgttgtttgc
    11821 gcctgccacg tcccaatacg cctgcaagcc caaagccaca cagattacag acaaggtgct
    11881 gacgctgatt ttccccgccg cgtcggcgga aacgacggcg gtcggtgtag gtgtaacgcc
    11941 tgccttcagg ctggtgttgc cgcccagcaa aatcatttct tcggcaacca tagtagcctg
    12001 aagggtttgg gcgaccgcca acgctttcac gtcctcgaaa ccgcgcgcgg cgtaatccgc
    12061 ttcaaaggtt acttggtttt ccaagccgat ggcgcggaat tgcgcgttgc gttccaccgt
    12121 ttcgtgattg atgacgccgc cgcgcctgcc ttcgccgata ccggcgcgtt ggttgccgac
    12181 gttgatattc gtgacggctt tccagttcga gccgatggtg cggccgccgc ccacgcgcgg
    12241 gatacggttg cgcaacgggg tcaataccgg gtagagtttt tgagacggcg cggaaaggtc
    12301 ataggtttgc aggccggcgg taaagccggc cggctgcgta aaacctttgt ccggcggccc
    12361 gccgcccgct tgtgccgact tcatcagttc aatcgtttct tgtgtgagtt ggttcacgtt
    12421 catttatcgc tcctgataat aaaaaaaacc gcctgtaagc ggtgttacag acggcctgtt
    12481 tgttttgctt taatgagtgt cgccacgtca tccagcgtgc cgtcattctt tacaatcggc
    12541 tgaaaacctt ttaacgggtc ttcgccgtta tcttctgcct tactgatagc tttcgtactg
    12601 cctttcggcg gtactgcctg tttcttcagg ctttcgattt ccgcctgtgc tttggcaagg
    12661 gcgtcattcg attttttcag cgcgtcttgt gcctttgcca gttcgtcagc cgattccgct
    12721 ttggcaagat cgcctgattt gccggctttg gccgccaaac cgtcggccgg cttatcggct
    12781 tcgcttgccg ccaacgcttt cagcgattcg gcaaggccgg ccgccgattc tttgatttgc
    12841 gcggtaacgg cttcatcgat gttgtcgtag gatgcgtcct caaccagcca tttcagcgac
    12901 atcaatacat cagccggtga tttgacttgg tacattgatt tggcggccgt cccgcctttc
    12961 ggcttgtcgg ctttagccaa taccgctttc aaggcggcga tttcagattc ggacaattcg
    13021 acgcttgccg attttccggc ttcgtccttt ttgccggcgt ccttatcgcc tttatcttcg
    13081 gttttaggcc ctttatcgcc gtctttagga ttttcatctt cctcttcggt tggtttgtca
    13141 gacggcttgc cgtctttatc cgccgcccct gcctcatctt tcggtttgtc cgccttaaag
    13201 caggtaaaca ccgcgtcggg attggcaggg cggtcgacaa ggctgatttc cgtcagcttc
    13261 aagcccgtga tttgcgactt gttcaaatca ttgcgggcgg taacgctgcc gccgatggaa
    13321 aagcctttgt aaacgcctgt cttgactttc gtcacggcaa cagggtcaac gatatgcgcc
    13381 ccgaaaaatg tgcgcccgtc gtcttccacg ttgatttcaa tcgccgttcc cgccgcgttt
    13441 gagccgtgca tctcgcgcac cgcgccgaac ttcatataat cgggaatcgc cgccttcatt
    13501 gcttccgccg cgacgacttc gccgtccgaa tcgaccgctt cgctcgaggc atacccccaa
    13561 actttgaccg tgccgtcgtc ctgcgcctcc gtcttggcga tttgcgcgta taacttcgtc
    13621 attggtttgc tccaaaaaaa agccgccccg cgaaggggcg gcaaaacaca cccgcctgac
    13681 ccgaaggaat caagattcag gcatatcccc tgccaaaaca ggcacaaccg cgcaccggca
    13741 gttcggatga ccgggtatcg tcaacgcacc gtgggagaaa ggctcgtgca aaccgattac
    13801 gcccatcccg ccgttggcat tgcagacatc ggacaccttg tcgtcttttg cggttatcca
    13861 ctgcttgccg gcaaccagcc ccgttccttc ccagcctatc aggttgccca taccgtccgc
    13921 catcgccgtt tccgttcggg caatggttcg ggcgcgtgcg ttgccgaaag catgggattc
    13981 tttcaggcgg cctgccaatt cctgcacact gtcgccgttt cgcatggctt cggctacttg
    14041 ggcgcgtatc atttcgcgcg tcccttcggt gatttgccac tcggcggcag gatttcggac
    14101 aagcccgccg cccgcccgct tcatgccgac catttcggcg gcgcgttcat gcgcccactt
    14161 gacggcgcgg ctgcgaatgt tcgtaaccat accggcggca ggttcaggca ttacgcgcaa
    14221 caaggcggca accgccccgt cttccgcaac acgcctgatt atcggctcga ccacatcgga
    14281 caatcccgac caatcgccaa aatccaagcc gtttgcaaca acccctgccg cgcggctcaa
    14341 ttccgccgcc aaatccccgg cctgccaatc gacggccgca ccctcaatca gcgccgcgat
    14401 ttgttcggcc aagccgtcaa tgcgtgtcag caaataagcc tcaataagcg cggcagattc
    14461 gtcttcgctc atcgggcttt ccgactttcc caacttttca gccccttggt tcggcggctc
    14521 ttcgggcttt cggccgtctt gcttatccgg ttcaggctgc ccctgccccg gtaacggctc
    14581 cttgcccagt tcggcgcgga tttcgtcggc ggtcaagatg cctgcgtttt tgtagatggc
    14641 gtagatttca gcctgttctt tcgggttgag cgattcctcc cccttccaga caaactcata
    14701 cgccgccata tccatgtaac gggcaagcac gtcgtcaatc agggctttta cccagttttt
    14761 caggctgccc atgccgtctg aaagcgactg ctcgcggctc gtctctgcca cgctgcggtt
    14821 tacctgcgcc acgaacggcg taggctcgac actaaacgca aagcagacga cacgcgccag
    14881 ccattcgtcg taaacgtcct tcaacggcgg ctgcttcgtc tcgcggaagt ttcgggacaa
    14941 ctcgcccggc acgaaacgca ttttgcgccg ctgcgccgtt tcgcccgaca gcagcaaatc
    15001 ccagtattct tgaaaccgcc tgatgtcgtc cgccgaccac gtttcaggca cgccgactaa
    15061 agcatcgggc acgctgcccg ccgtgtagta ttccagcgcg tgaacctgcc gttttaaggc
    15121 aatattcacg gtcatgatga tttgctcgac gggcgaatag ccgtaaacct tgtaacttcg
    15181 gttattccgc gaacggtaaa tcaactcgtc agccgtgtaa tcgaccgccg ccatgccgtg
    15241 caggatttgc tgatacgccg tatcgggcgg taacggcata cgccccgtat tgtccaaaac
    15301 gcgcttaatc gtcgccccgt ccatcacttc gagggcgtac aagccgccgc ccagtgtttt
    15361 gcgcgggtag atgcacggcg cgtcaatgac aaacaggtct tccagcaaga tgcgcagcca
    15421 gtccgcccac gtatgttctt tatcgggcga ccggaagaac gcaacggctt catcgacctt
    15481 tcggtctttc cgttgcgatt cgtcgtcttc ggttgattcg acgtcgcgct tttggattgt
    15541 ccacttaagg cactccattt ggtctttacg cgcctcgata accaaacgca atacatcgta
    15601 gttgtcggca agggcgcgta attgcgcaaa gcctaccgct tcacgttcgc gcggcttgga
    15661 atgcccgacg ttgtagaacg gctcgtaatc aaaccgccgc ccctctgcct gctgcgcggc
    15721 aggggccgga ggctcgcccg cgtcgaacca cccgtccgcg ttgccggtaa aggcgtaacg
    15781 gacgccggcg gcaacgcggg caataaagcc ttgcgataaa ggtgtctttt tactcatttc
    15841 acagcctcga cctgcgatcg caggaaatca atcatgcccg tccgggtatc cagcagctcg
    15901 ccaaacgcac ggcccaaaca gtctatttgg tcgtcatgcc ggccgttcgg gaacatgcgc
    15961 atttccgcaa tcagcgcgtc cgtgtcccat gtgccgtcgt ccagcaccat cacattgccg
    16021 atgttgacct gtgccgcgaa cggtccggcg cgtgtaacct tgtcgcccga ttcggggccg
    16081 gcggatacgg aaaaacccgc caactggcgg gttaggtata gtgtttggga tttgcctgcc
    16141 tgaccggggt cttgcgggat ggatattttc gttttcacgc cgtctttttg cgccgtgttg
    16201 cgtaatatcc tgtcccgctc gtccgcgccg taccggccgc gcacgacgtt ggcgatgata
    16261 taccgcccgt cttccgtaac gccaagcctg ccgcctgccg tgtagtcgcc gccgtttgcg
    16321 gttgaagcca agtcccacgc gcgtacccat ctgatattcc cggcaggcaa cgccttgaca
    16381 aattgcaggt tgtcaggctt gaacgtaccg ccgtcaggcg gggcggggcg ttgcaaatac
    16441 tgcccggcaa acacatacgg cgcggcctgc tccattcggc gcagtgtttc aatatcatgc
    16501 ttttcaggcc acaacgccgt gccgtcttcc tgaatggcag gcaggcacaa atgctcccac
    16561 tcttcgccgt tgccgccgtc aagcagccag cccgccaagt ctttctcgtg caggcgttgc
    16621 ataatcagga taatcggcgt gtcagggctg ttcttccggg attcgaccgt gttttgaaac
    16681 cagtcgatga cgttctgccg cctgacctcg cttcgcgctt catctgcttt gtgcgggtcg
    16741 tcaatgatga tgcagccgcc gaatccctcc cgatgcctgc ccgcaccgaa acctgtaatc
    16801 gtaccgcccg cacctgttgc gtacatcacg ccgcctgcgg ttgttttcca gtgatggccg
    16861 ctttcgcctg ccagtgccaa atcaggaaaa atcgcccgat actcttcgtg ttgcaccaag
    16921 ttccgaatct gtacggagtt attgaccgcc agcgccgccg aatagctcgc gtggataaac
    16981 tcgcaatcag gcacgcgccc catcgcccac gcgataaagt tcacgaccgc gatttccgtt
    17041 ttcgagtatc gcggcggaat attgataatc aggcgtttcg tttcgccgtt gaaaacacgc
    17101 tcgagcgcgt tgcagattgg cgcatggtga ttcgcccgct gccaaacata gccgcgcctt
    17161 tgataaaaca tccggcgcgt gaacatatac aggcttgcag aacttaaact gcgaattact
    17221 gatgtttcaa catcgtcgaa ttgccctagt gccatttcat tctaacttcc tttggagaaa
    17281 cggccataca gcccctctta tgattagcgt tttatgctaa accctacgca aaacatcttc
    17341 cgctatcttg cgatattcct cagcatcaag ccgtacagcc gccctcatgc tcccatcgcc
    17401 cgatttaacg tcaagctccg atttgtcgcc gtatttcttc ggcgcaatct tggaagccgc
    17461 ccactttcgg gcatctatct gcaatttcgc ctttgaaacc gccgcgctct ctgcttgtgc
    17521 actatcggca atctcgatga tttcttcagc gaaatagtcc gcctgctttt ctctcgcgcg
    17581 cgcgtattgg tggcgaaatt cttcattagc ttccaaccaa cggtaaatag ttttcattgg
    17641 cggcacacca tcttcggcac atattgaacg taggcttctg ccatttgcga ttttttcgca
    17701 tatcttatcg gccatgtctt tcgtgtaatc tgtcggacgg cctaatttgc gtttcgtgcc
    17761 gctcataaac cctcctcaaa aaagaaaccg tctaactctg acccctctca gaattagacg
    17821 gcaaacacac actcgccaca taggaaaaac ggaacgccgc tacctgtaca ggcagaagct
    17881 caaattcgga cagcctaaaa cgcaaaaacc cgcacattgt tatgtacggg cttaaaaatt
    17941 catatccttc gggcgtgcga aaatccccgc aagggtaacg atttgaatta tacacctatt
    18001 gccggaaaaa acaacaggcc gtctgaagat tcagacggca tttgtattcc ctactgcatc
    18061 aaaccgccga caggttgcgg atttcgggca gtatcgggcg gattttttct gcgtgttccg
    18121 cgtcggcgtg tgcgcttaag gcttcgaggg cgtttgcggc ggctttgagg cggctgcgcg
    18181 tttccgccca gaccgtccac atcgtaaccg cctgcctgca gccgagctgc ttcagcggca
    18241 gggaaacgtc tctgcccatt tggatggccc gcgcgccgta gctgacggcg acggcgaggt
    18301 cgtacagggc gttgccgctt atgggcaggg cgggttgcgg cgcgggtaac ggttcgcggt
    18361 caaggacttc gcccgtcaag cctgtgtgca gggtcagcgc gtggacgtag gcgacggctt
    18421 cgggcagctt cccggcgggg atgtcttcga tggcttcgac gttgaagcgt tggtgaatca
    18481 tactgtacgc tgaggagtag tctatgcctt tgcgtccgac aagtgcggca acggcccggc
    18541 gcaatccggt acggtcgtcg gcggtggttt tttgtccgac ttggtagccg cctgttttgc
    18601 ggatggtggg caggacttcg gatgttaccc atttgcggaa tttccaagcg gttgagcctt
    18661 gttccattgc tttacggctg cgaagaatca aaatatataa accgctttcg ttgatgatgt
    18721 tcacgttacc gccgcctccg tgaatttcag accgccctat gttaaacata gaccgctcgt
    18781 catcatctaa tttttcaagt gcttgcgttg ggttctggat ttctaaagcc ttacatacat
    18841 cggcggcaac aaaccaagtc aagccgtctt tttcaaaggc acgaacggga gaagtagtat
    18901 tgaaattaaa tgattgaatt acgttcataa tgaagtttcc tagtgagttt tcttaatgcc
    18961 cgttagggcg gacgcgtggt taagaaccct cactagatgg gcggacttat tccccttacg
    19021 ggtattgtat tcgtcgccca cgcgtccata agaaacttcg gttgtgccat cgaaacaaac
    19081 aacacgaaag gaaacttaca gatatgaaaa aatcacattg acggagtgat tgccgctagt
    19141 gtgtggttct tacgccacga acaggaatat aaaacaaaac cccctgcata tgcaaggggt
    19201 tttttactat ttctgttcaa tcgaaacttc cactttattg tctgtgataa cgcaatatgc
    19261 ccgataatca atctgcattc caagcccgtt tttagccgta aatccacggg taaccaagac
    19321 attgccattc tgatttactc cggttgccgt gtctaggatg tgcgggtcaa acgttctggg
    19381 atgattcaat tgagctttga ttgcctcatc acactgactg atgacggctg aactatcaat
    19441 ctttttatcc tgttcagcgg ttgatttccg accggaatta aggtcgtcag tagatacaaa
    19501 aaagcgtttg ccattcctgc aatctacaaa gaaaaccatt tgttttgctt tcgggttgct
    19561 gcgagaatct gaaatatcaa cagtttctac tgcatcgcat gaatcctccc gagcaatatg
    19621 ttcggctatc cgtggcaaat aaccattcat ttcattgaca gccttctcgc cccactgctt
    19681 gtacaacttc ggataagctt tcttatcgta cttaaattcc cgtacgcctg aagcaatttt
    19741 cccatcaatc ttctgctttt cggctgccgc cttctcttct ggcgttaatt cctttttcgg
    19801 cacagcgcac atagcgacaa acagcaaaac aaaaataccg cccacaatca gcttgatttt
    19861 ctttgctttt tttgccttag ccgcagaatt aacctgcctt tggttgtatt gctgccgccg
    19921 ctcttctggg ttttgtggtt cattataaag ggcgaccttc accgcttgca ggaatgcgtc
    19981 gttcttctcc accagcatgc ggcggccatc aaaaaacaca acctctatca cgccgccgtc
    20041 ctgcacctca taacctgcaa tatcaagcag cgcaaccttc ccaccacgag aaagaacaat
    20101 acaatctttt tttaagacgg ctttcccttt atgaaaatcg ccagccagta tgttgatata
    20161 tgccatttcc ccatctccca ttaagaagtg ttaatttcca caatcatacc gtaaccgaaa
    20221 agaaaatcaa accttctcaa acagcaaatc aaaatcgtcc cctgccgcct gccgtatcgc
    20281 cccgtaccac gcggccaagc ccaaatccgt ctgcaaatgc aggggcccct cgccgcgccg
    20341 cctgatttca gcctgcaaac gttcctcgta ggctgcctgc gacttcgcac cgatgccgaa
    20401 cgaaatacgg acggcctctt gttgcggcgc atccaccttc gcccatgcct gcaaagtcag
    20461 aaacatggca tcttcgccgt atctcaagcc gatttcaggc ttatgcgggc aaacttcctc
    20521 ccccatataa cggccttcga tactcaaaca tctatttagg ctgcgcgtat cacggtaacg
    20581 acgctcaaaa gcacgcgcca agtcgttcat aaattcaaat tcttgctgat tcatagcttg
    20641 attaaccctt tttcatgcaa caaaaccaaa gtccgcatta caccttccgc gaaggccgtc
    20701 tgaagttccc cttccgcaca atccgccaag cggttctata catcaaaa
//
LOCUS       DAXGCP010000031        20358 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.031, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000031 DAXGCP010000000
VERSION     DAXGCP010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20358)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20358)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20358
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.031"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            64..710
                     /locus_tag="ACFJCW_000986"
                     /pseudo
     CDS             64..710
                     /locus_tag="ACFJCW_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
     gene            complement(782..2527)
                     /gene="recD"
                     /locus_tag="ACFJCW_000987"
     CDS             complement(782..2527)
                     /gene="recD"
                     /locus_tag="ACFJCW_000987"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HFC4151160.1"
                     /translation="MELQTDEFAQAAARAAIRFLERYAGSGNEVLANCTERLFQALQN
                     GHSFIRLSGDEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGAGSEGQRDAAALALLQFFMVITGGPGTGKTTTVAKLLA
                     LICGENENLPHIALAAPTGKAAAHMARALHRSINGFDAPEAVRRHLLKLEGQTVHRLL
                     KLSPPKMQAAFDHIRPLPFDVLIVDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSQKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSYVRRKMNIPEHLAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPEFEPAFAMTVHKSQGSEY
                     REVWLLPPSDAPSDEGDDALSGLSKKLLYTAITRAREKFVFFGGKKTFCQAVNTVKVR
                     QTALGSMLERVFSQE"
     gene            complement(2594..3289)
                     /gene="lolD"
                     /locus_tag="ACFJCW_000988"
     CDS             complement(2594..3289)
                     /gene="lolD"
                     /locus_tag="ACFJCW_000988"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HFC4151161.1"
                     /translation="MSDLILKCEGVGKRYRDGGLDVPVLYGLDLEIRTGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRALNQRRLGDLRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKSRKEAVETAMAMLDKVGLKHRSTHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPRQGANA"
     gene            complement(3282..4529)
                     /locus_tag="ACFJCW_000989"
     CDS             complement(3282..4529)
                     /locus_tag="ACFJCW_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HFC4151162.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFAENRKGILAAAPYVSNQAL
                     LANAGEIRGVQIRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGGKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTATLIPEAQRDTVWVRDWTYSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLWGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            4755..5033
                     /locus_tag="ACFJCW_000990"
     CDS             4755..5033
                     /locus_tag="ACFJCW_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151163.1"
                     /translation="MNIRKISALCAVAVFTVSTAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPVSLNGGSGSITVSGSSAAQCVFTVGSGGTLQIQGLNCK"
     gene            complement(5089..5706)
                     /gene="recR"
                     /locus_tag="ACFJCW_000991"
     CDS             complement(5089..5706)
                     /gene="recR"
                     /locus_tag="ACFJCW_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HFC4151164.1"
                     /translation="MNSKKQDAFQRLIGALKVLPNVGPKSAQRMAYHLLQQKRKEAEE
                     LVDALQTALRQVRHCARCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNIEAANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLDGGEIEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(5773..7311)
                     /locus_tag="ACFJCW_000992"
     CDS             complement(5773..7311)
                     /locus_tag="ACFJCW_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HFC4151165.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISEHSINNAMQNEQADGGSPWRDAVFQSLLQRAYLKQGAKLMGISVSSEQIKQMIV
                     DDPNFHDANGKFSHALLSQYLSQRHMSEDQFVEEIRDQFALQNLVSLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKASEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPAHEAKPSFEQEKAAVENELKMKKAVADFN
                     KAKEKLGDDAFNHPSSLAEAAKNSGLKVETQETWLSRQDAQMSGMPENLINAVFSDDV
                     LKKKHNSEVLTINSETAWVVRAKEVREEKNLLFEEAKDAVRQAYIRTEAAKLAENKAK
                     EVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPANGKPAYVRLTGLP
                     APVIVEVQAVTPPEDIAAQLPPAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GDGQ"
     gene            complement(7360..7734)
                     /locus_tag="ACFJCW_000993"
     CDS             complement(7360..7734)
                     /locus_tag="ACFJCW_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HFC4151166.1"
                     /translation="MIILHGIPNCDTVKKAKNRLAGYGLEFGFRDFKKQMPSEAEICS
                     WLEQVPLATLFNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGSRV
                     YVGFSEETYDGIFNRQAPCRQG"
     gene            7884..9512
                     /locus_tag="ACFJCW_000994"
     CDS             7884..9512
                     /locus_tag="ACFJCW_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HFC4151167.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGNRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLRQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFRNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGREGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALDKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            9591..10823
                     /locus_tag="ACFJCW_000995"
     CDS             9591..10823
                     /locus_tag="ACFJCW_000995"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HFC4151168.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPKTHEEYALARTERKTAKGYAGFSFHADKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRAARFAARYGFEIAEETIKLMRQM
                     VENDEADALVAERVWQELAKGLMEKNPRKMIEMLRECGVLKVLLPEVDALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPPDILPRHHGHDINGVE
                     PVREVNQRLRAPRQCAELAELVCRWHIIFHQVEKLRSKTVIDVLKKTDAFRRPERFAA
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRAQGKAHFIAEQI
                     DRARLAQIAPLQKTFRGA"
     gene            11242..11550
                     /locus_tag="ACFJCW_000996"
     CDS             11242..11550
                     /locus_tag="ACFJCW_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151169.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGETRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            11634..12665
                     /gene="ruvB"
                     /locus_tag="ACFJCW_000997"
     CDS             11634..12665
                     /gene="ruvB"
                     /locus_tag="ACFJCW_000997"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HFC4151170.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMGEEGA
                     MEVAKRSRGTPRIANRLLRRVRDFADVKNNGVIDAAVADAALSMLDVDAQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(12910..13593)
                     /gene="rpe"
                     /locus_tag="ACFJCW_000998"
     CDS             complement(12910..13593)
                     /gene="rpe"
                     /locus_tag="ACFJCW_000998"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HFC4151171.1"
                     /translation="MTAYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRQV
                     RAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIAAM
                     RAELEKAAG"
     gene            13739..14173
                     /locus_tag="ACFJCW_000999"
     CDS             13739..14173
                     /locus_tag="ACFJCW_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HFC4151172.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQGQHNELRKIRAAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYHSSMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
     gene            complement(14186..15049)
                     /locus_tag="ACFJCW_001000"
     CDS             complement(14186..15049)
                     /locus_tag="ACFJCW_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC4151173.1"
                     /translation="MELNEFLDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHVFPLSRLAGVGRQTELLVRNTEQFIAGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVMVYATSNRRHLMPEYLDENAGTTGVRGEIHQKEAVEEKVSLSDRF
                     GLWLSFYPFDQNDYLAAVRSWLEDFDVPYDEAARTAALQWAQMRGNRSGRSAWQFACD
                     WAGRLPEQRAP"
     gene            complement(15057..15674)
                     /locus_tag="ACFJCW_001001"
     CDS             complement(15057..15674)
                     /locus_tag="ACFJCW_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HFC4151174.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFQTYVVELPQEAAENLQHGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFALPHELKPYILTKGFVGLDGCSLTIGKVEDSRFNVH
                     LIPETLERTLFGSRKAGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            complement(15837..16451)
                     /locus_tag="ACFJCW_001002"
     CDS             complement(15837..16451)
                     /locus_tag="ACFJCW_001002"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HFC4151175.1"
                     /translation="MKTSNFPKSPPALKTFALILAGGLADRMGGEDKGLALLEGRPLI
                     DRVIGKIRPQVSHIVISANRNLEEYARRSPHVFPDARQWQHFGPLSALCTAANDLQLA
                     AVDWLLIVPCDMPYLPDDLVARFESVSKRTPLCNAFYVETPVTMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARPVRFEFDGHFADLNTQTDLQEG"
     gene            16658..18427
                     /locus_tag="ACFJCW_001003"
     CDS             16658..18427
                     /locus_tag="ACFJCW_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HFC4151176.1"
                     /translation="MILPTRFSDGIPLSLRLKLLTGLWVGLAALSVVLTLLLSFRLEN
                     AASVIEEAGNLKMQAYRLAYMAGEGSPRAQIDNQIAEFEKSLKRISQSDAIHPLIPSD
                     NPLAYDLIQSMLIIDWQANILPPLQAYRRPTQIELYRFAGNIELFLQALENAGEKNTW
                     WLRRFQWVIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGQRHFDIPVPEDGTPE
                     FKQVGRCFNQMALRLKTLYDDLEGQVAEQTHNLEKQNRNLTLLYRTTRDLHQSYTPRQ
                     AAEEFLNHILPAVGAQSGNICLENGSDTDISVHTAEHGKKPPLEKYHDETFPIEYQNE
                     KLGMLSLGFSDGTSLTGDDRTLLQTLIRQLGVSLAGAKQEEEKRLLAVLQERSLIAQG
                     LHDSIAQALTFLNLQVQMLETAFAENKREEAAENIGFIKTGVQECYEDVRELLLNFRT
                     KISNKEFPEAVADLFARFTQQTGITVETVWENGSFLPTQDEQLQMIFILQESLSNIRK
                     HARATHVKFTLSEYGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIRAVL
                     EIRSQAQQGTTVSLTGAPKESLP"
     gene            18424..19080
                     /locus_tag="ACFJCW_001004"
     CDS             18424..19080
                     /locus_tag="ACFJCW_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HFC4151177.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLDMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECMRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQRTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
     gene            complement(19281..20285)
                     /locus_tag="ACFJCW_001005"
                     /pseudo
     CDS             complement(19281..20285)
                     /locus_tag="ACFJCW_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_304669545.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         4697 a         5876 c         5096 g         4689 t
ORIGIN      
        1 atggccgttg cgtcaaatgt cagcttggat atgtccaatc ctacagtgtt acgcaatata
       61 taaggggttg ccgttccgca gttgggcggc agcatacacg ttcctttcgg cgtattctcg
      121 ccgttgcgcg gcgaatatct cgacctgctt gcccatgcgc cgtcaacggg ttttcagacg
      181 gcattcgata tcgggacggg ctcgggcgta cttgccgcca ttttggcgaa acagggcatt
      241 ccttccgtca tcggcacgga taccaatccg agggcggttg cctgcgcccg tgccaatatt
      301 gcccgtttgg gttttgaaaa acaggttgaa atccgcgaaa ccgatttatt tcccgaaggg
      361 tttgccgacc tgattgtctg caatccgccc tggcttcccg ccaagccgac ttccgccgtc
      421 gaatccgcgt tatacgaccc cgaatctgcg atgctggctg cgtttttgcg tgatgcgcca
      481 aacatctgaa tcccgacgga gaaatccgtc ttatcatttc cgacctcgcc gtgcatttgg
      541 ggctgcggtc tgccgacttt ttggaaaagg catttatccg ggcgggtttg cgtgttgagg
      601 atgttttgaa aaccaaaccg gttcacaaaa aagctgccga ttcgaacgat ccgctggctt
      661 ttgcccgaaa cagggaaact actttcctgt gccgtttgaa aaaggcataa ggggcggtgg
      721 cgtgcttccg acggtaggca tcggaacgcc cgcgccgccg gcacggcatc attcgggcgg
      781 attattcttg tgaaaatacc cgctcaagca tactgcccaa cgccgtctga cggactttga
      841 cggtgtttac cgcctgacaa aatgtctttt tgccgccgaa aaatacgaat ttttccctgg
      901 cgcgggtaat ggcggtatat aacagcttct tactcaatcc ggacaatgca tcgtcccctt
      961 cgtccgaagg tgcgtcggaa ggcggcagca gccagacttc ccgatattcc gaaccttggc
     1021 ttttgtggac ggtcatggcg aatgcgggtt caaattcggg caggcagctt accgctacct
     1081 ttttaaatcc gtccgcatcg gcaaaatagg cggcaaggct gccctgccgt ccgacatctt
     1141 ccataatcag tccgatgtcg ccgttgaaca gctcaagcgc gtagtcgttc tgtctgatca
     1201 taatcggctc tccggcgaaa taggccaaat gttccggtat gttcattttg cggcgtacat
     1261 agctgcaata ggcttcgttg aagtcttccg catcctgccg ccaagctgcc agaaccacga
     1321 tatccgagat acctgcgtat gcggcttcga tattgccgtc ttttaccgcc tgccaatagg
     1381 ctttgtgcgc ccggtacaac ctttcgaccc gagcattcgg actgcattcc gaatgttcca
     1441 gttcgtccgg aaaccggtca aacaatgccc acgccccttc atcgcccgat acggcggcac
     1501 gggcaaggca gccgatgccg ctgttgtcgc cgaagcggtg gctgaacgac agatgggcgg
     1561 tgttttgcgc caacacgggc ggatttgcgc tgacgctgaa accgtgttcc ggaaggaaac
     1621 cggccagcct ttggtgcgtt tctccgtcca aaacggtttt ttgcgacaaa acggacagca
     1681 ccgccccgat tccgacggac gggagctggt tttcatcgcc cagcagaatc acgcgcgcgc
     1741 cggttttgac cgctttcaaa agttgcagca tcaatgcggt atccaacatg gaggcttcat
     1801 cgacaatcag cacgtcgaac ggcagcggac ggatatggtc gaacgccgcc tgcattttgg
     1861 gcgggctcag cttaagcagt cggtggacgg tttgcccttc cagtttgagc aaatggcggc
     1921 ggacggcctc cggcgcgtca aaaccgttga ttgaacggtg cagtgcgcgc gccatatgtg
     1981 ccgccgcttt gcccgtcggt gcggcaagcg cgatatgggg aagattttcg ttttcaccgc
     2041 aaatcagtgc cagcagtttg gcaaccgttg tcgttttgcc cgttcccggc cctccggtaa
     2101 tcaccataaa aaactgcaac agtgccaagg cggccgcatc gcgctgtcct tcgcttcccg
     2161 cgccttgaaa ccattttgcg aggttttgcc gcgcgcctgc cgcgtcgggg gcagacgtgc
     2221 cggctgccgc caagcgtttt atttcggcag ccaaatcgta ttccaactgc cacatcctgc
     2281 ccaaaaacag ccttctgcct tccaaaatca aaggcgcggc ggatgttccg accacgggtg
     2341 cgagtgccga cagcgcgtca gcctcgtccc cgctcaaacg gataaacgaa tgaccgtttt
     2401 gcaatgcctg aaacaggcgt tcggtacagt ttgcaagcac ttcgttgccc gaacccgcat
     2461 agcgttccaa aaaacggatt gccgcccttg ccgccgcttg ggcaaattca tctgtctgca
     2521 gttccatcgt attccttgtc gaaatgccgt ctgaaggcac ggggcttcag acggtgcgtg
     2581 ttgtttcggc tgtttaggcg tttgcgccct gtctggggtg caggctgccg tctttcatga
     2641 ccatcacgcg ctcgaagcgg ccggcgagtt cgtcgtcgtg cgttacgacc accagccccg
     2701 ttcccaattc cgttttcagt tccagcatca tatccaaaac attccttgcg tttgcccggt
     2761 cgaggttacc ggtcggttcg tcggcaagca ggcatttggg ttgcgtaacc aaggcgcgcg
     2821 caatggcggc acgctggcgt tcgccgccgg acagttcgcc cgcacggtgc gtcgaacggt
     2881 gtttcagtcc gaccttgtcg agcatcgcca ttgccgtttc taccgcctct ttacggcttt
     2941 ttttgccgat cagaagcggc atcatcacgt tttccagtgc cgaaaattca ggcagaagat
     3001 gatggaactg gtacacgaaa ccgagatggc ggttgcgcaa atcgcccaaa cgccgctggt
     3061 ttaaggcacg caaatcctcg cccatcagca gcaccctgcc ttcagacggc atatccagcc
     3121 cgcccaaaat atgcagcagc gtcgatttgc cgctgcccga agagccgatg atgccggtgc
     3181 tttcccccgt gcggatttcc aaatccaagc cgtacagcac cggaacgtcc aaaccgccgt
     3241 cacggtagcg tttgcccacg ccttcgcatt tcaaaatcaa atcactcata acgcaaagcc
     3301 tccgccggtt gggtttttga cgcgcgccag ctcgggtaca gtgtcgccac gaaagacagc
     3361 cccaaggaaa tgcaggcaat cagggcaacg tcgcccatat cgacatcact gggcaggtag
     3421 tcgataaaat aaacctgcga attgatgagg tggacaccga gcaggttttc aaaaaacgcc
     3481 acgaccctgc cgacgttcca accccaaagc acgccgcaga ccacacccgc cagcgtgccg
     3541 aaaaagcctg aaaacgcgcc ctgcaccata aaaatcttca tcacgccggc aggggaaaga
     3601 cccaaagtcc gcaaaatcgc aatgtccgcc tgcttttccg taaccgccat caccaaggaa
     3661 gagacaaggt tgaacgccgc cacggcgata atcagcgtca ggataatgaa catcatccgt
     3721 ttttccaatt cgaccgcttc aaaatagctg cggttgctgt acgtccaatc gcgcacccaa
     3781 accgtgtccc tttgcgcctc cggaatcagc gttgccgtca aggcgggggc gttttgcgga
     3841 tcggcaagct tcagccgcag ccccgcaact tccttatcca agcggtacag tacgcgcgcg
     3901 tcttggatat gcgtcatcgc caatgagttg tccacttcgt aaacacccgt cttgaccagg
     3961 ccgaccacgg taaactgctt caggcgcggc acgactccgg caggggtaac gttgccctcc
     4021 ggcgtaatta ccgtaacctt gccgccgact tccgccccca aagcctccgc caaaccgaca
     4081 ccgaggataa tgtcaaactc gcccggaatc aggtcttcaa acttgcctgc cggcattttg
     4141 tcgccgtatt ccaccacttt gcgctcttca gacggcaaaa tgccgcgtat ctgaacgccc
     4201 ctgatttcgc ccgcgtttgc cagcaatgcc tgattggaaa catagggtgc ggcagccaaa
     4261 atgcctttgc ggttttcggc aaaccgaagc aggttgcgcc aatccgtatc cgtattgtcg
     4321 atatagccga tttcggcgtg cggcgcgaca ttcaggagct gcccgcgtat ttctttctga
     4381 aagccgttca taaccgacaa gacgacaatc agcgcggtta cgcccaaggc gattccggca
     4441 atcgaaacca tcgtgataaa cgacataaag ccgttgcgct ttttcgccct gagatacctc
     4501 aagcctatcc aagcctctag agaaaacata acgctacctt aaaaatgtct gcaaacgtgc
     4561 cgccccggac ggcggtttgg gggaggcggc aaaagtttat tgtaccgtaa aaccccggca
     4621 gcgtccgaac ggcaggctgt gtaaataaag acgcggtatg tggcaaattc ggaaaaacag
     4681 gacggaaaac ttgcacaacg cgccgaacta ccctatcctt ctcttgaaac aaaacctttt
     4741 ctttaaggaa aacaatgaat atcaggaaaa tctccgcttt gtgtgctgtt gccgttttta
     4801 ctgtttcgac agcctatgcc aaagaaatca aaatcgatgc caacaacacg ccttattccg
     4861 aagccgacgc gcaaaagctg gcggcaacgg cagtcggtat gggcgttaag gaacctgtca
     4921 gcctgaacgg cggcagcggc agcattaccg tttccggcag cagcgcggcg cagtgcgtct
     4981 ttacggtcgg cagcgggggc actttgcaga ttcaagggct caactgcaag taaaccgccc
     5041 gaaaaaatgc cgtctgaagg cttcagacgg cattttgcat tggcggcgtt acgccccgcc
     5101 ttctttaatc agacgccgtt cgtacaccgc ctgcgccagc gttcccgcat cgacatattc
     5161 caattcgccg cccaatggga tgccctgcga cagcctgctg accttgtaag gcaggttttt
     5221 gaaaaactcg gacaggacat acgctgtggc attgccttct gcggtaaagg cggtcgcgat
     5281 aatgatttct tcgatttccc cgccgtccag ccgttgcgcc agcctgtcca atgcgatggc
     5341 ggatacgtcc attcccaatg ccgtattgat ttgccccatc aggacgaaat acagcccgtc
     5401 gtggcagttt gccgcttcta tattcgacac gtcggcaggc atatgcacca ccatcagccg
     5461 ccgcccgtcg cgtgtttcat cggcacaaat atcgcacaat ccgccttcgc aaaatgtatt
     5521 gcaccttgcg caatggcgaa cctgcctcaa tgccgtctgt aaggcatcca ccagctcttc
     5581 agcctctttg cgcttttgct gcaacagatg gtacgccatc cgctgtgccg atttcggccc
     5641 gacgttgggc aatactttca gcgcaccgat caggcgttgg aatgcatcct gttttttgga
     5701 attcatcata ctccgccata tgggaaaacg gtcggaatat tccgaccgtt atgttgtcaa
     5761 caaaagtgtc aattactgac catcgccgtt gtcaaccgat tgtgctcctt tagtctgttt
     5821 gatttttccg ttgaaatagc ggatcagcag gtcgaaagta ttggcagact gctgttgcgc
     5881 caaagcctgt ttcgcaggag gaagctgtgc ggcaatatcc tccggaggcg tgactgcctg
     5941 cacctcgaca atcacgggtg ccggcagacc ggtcagtctg acataggcgg gtttgccgtt
     6001 tgccggtttt gctttcagca gttccgcata agcctcgggc ggcatggact gccttgcctg
     6061 ctgcgcgccc aaaacggaca cttccgacca tttcacgtca actgccttgc cgccgttcag
     6121 ttgggtaagc acttcttttg ccttgttttc ggcaagtttg gcggcttcgg tacggatata
     6181 ggcctgacgc accgcatctt tggcttcttc aaacagtagg tttttttctt cgcggacttc
     6241 tttggcgcgg acgacccacg cggtttcgct gttgatggtc agcacttcgg aattgtgttt
     6301 tttcttcaat acgtcgtcgc tgaatacggc attgattagg ttttcgggca tgccggacat
     6361 ttgtgcgtcc tgcctgctca gccaagtttc ttgggtttcc actttcaaac cgctgttttt
     6421 ggcggcttcg gcaagcgagg agggatgatt gaacgcatcg tcgcccagct tttcttttgc
     6481 cttgttgaag tcggcaaccg cctttttcat tttcaattcg ttttcgacgg cggctttttc
     6541 ctgctcgaaa gaaggtttgg cttcatgtgc cggcaaacgc gccacgcgct cttcaaacgc
     6601 atttttcact tccgtttcac tgacggtctg cttgtctgca aaatccttca gattcaaggc
     6661 gacatattcc aatttgaccg cctgcggcag cagatagtct tttttgttcg cattataaaa
     6721 tttctgcaaa tcggcttcag acgctttgac ttgggcgatg aactcgtcgg ggttgaaagt
     6781 gtgcgaacgg atggtgcggt tgacctgcgt cagcctgatc agctgttccg cctgcgcgtc
     6841 gccgaccaat acgccgtttt ggacgaggct taccaaattc tgcaaggcaa actgatcgcg
     6901 gatttcttcg acaaactggt cttcagacat atggcgttgc gacaggtatt gactcaaaag
     6961 cgcgtgactg aatttgccgt ttgcgtcgtg gaaattggga tcgtccacaa tcatctgctt
     7021 gatttgttcg gaagaaaccg aaatgcccat cagcttcgcg ccctgtttca ggtaggcgcg
     7081 ttgcagcagg gattggaaca ccgcgtcgcg ccaagggctg ccgccgtccg cctgctcgtt
     7141 ctgcatggcg ttgttgattg agtgctcgct gattttttcg tcgcccactt ggacgatgta
     7201 gtcggcgccc ggatgggaaa ccgtgctgac gccgaagccg acaaaagtta atgcaatcag
     7261 gcctaataag acttgggcgg gtgttctgta tttttcgatg gaatggaaca tattttcaga
     7321 ttgggaatgg gaaattcaag tcgggtattg taacggtttt tatccctgtc tgcacggggc
     7381 ttgccggttg aagatgccgt cgtaggtttc ttcgctgaag ccgacgtaaa ccctgctgcc
     7441 gcactccaat acgggacgct tgatcaggct cggcatttcg gacatcagtt tgacggcctc
     7501 cgccgtcgag gacagggctt tttgctgtgt ttcggcatcg agtttgcgcc agcttgtccc
     7561 gcgtttgttg aacagggttg ccaaaggcac ttgttccagc cacgagcaga tttccgcttc
     7621 agacggcatc tgttttttga aatcccgaaa cccaaactcc aagccgtatc cggcaagcct
     7681 gtttttggct tttttgactg tgtcgcaatt tggaatgccg tgaaggatta tcatttggaa
     7741 accttttgcc tgaaataata aaaccgatat tttactataa gtgtctgaaa atttgcccgt
     7801 ctgtttcaga cggcggggcg gttatgttac aatccgaaaa ttcgaaaaat ttaatctctt
     7861 gttcaataaa ggttttaccc ataatgattt ctaccaacgg cattaccatg cagttcggcg
     7921 cgaagccgct gtttgaaaac gtatccgtaa aattcggcga aggcaaccgc tacggcttga
     7981 tcggcgcgaa cggttcgggc aaatccacct tcatgaaaat cctcggcggc gatttggaac
     8041 agaccgccgg cgaagtggcg attgaaaacg gcgtgcgttt gggtaaattg cgccaagacc
     8101 agtttgccta cgaagacatg cgcgtgctgg acgtggtgat gatggggcat accgaaatgt
     8161 gggcggcgat gaccgagcgc gatgcgattt acgccaatcc cgaagccacc gaagacgact
     8221 acatgaaagc cgccgaactg gaagccaagt tcgccgaata cgacggctac accgccgaag
     8281 cgcgcgccgc cgaattatta agcggcgtgg gcatttccga agatttgcac aatgcgaaaa
     8341 tggcggaagt cgccccgggc ttcaaactgc gcgtattgct ggcgcaggcg ctgttctcca
     8401 agccggatgt attgctcttg gacgaaccga ccaacaactt ggacatcaat accatccgct
     8461 ggctggaagg cgtgttgaac caatacgact ccaccatgat catcatctcg cacgaccgcc
     8521 acttcttgaa cgaagtttgc acccacatgg cggatttgga ctacaacacc atcactattt
     8581 atccgggcaa ctacgacgac tatatgctcg cttccgccca atcgcgtgag cgcgccctga
     8641 aagacaatgc caaagccaaa gagaaactgc aagagctgca agaattcgtt gcccgttttt
     8701 ccgccaataa atccaaagcc cgtcaggcaa ccagccgtct gagacaggcc gacaaaatca
     8761 aatcggaaat ggtcgaagtc aaaccttcta cccgtcaaaa cccgtatatc cgttttgaag
     8821 ccgatgaaaa agccaagctg caccgtcagg ctgtggaagt tgaaaaactg gccaaacgct
     8881 ttgaaaccca gttgtttaga aacctcaact tcatccttga agcaggccaa cgcctcgcca
     8941 tcatcggccc gaacggcgca ggtaaatcta ccttgctgaa actcttggcc ggcgcgtaca
     9001 accccgaata ttcagacggc ctgttgccgg acgaaggcag catcaaatgg gcggaaaaag
     9061 ccagtgtcgg ctactatccg caagaccatg aaaacgactt tgacgtcgat atggacttga
     9121 gcgaatggat gcgccaatgg ggtcgggaag gcgacgacga acaagtcatc cgaggcactt
     9181 tggggcgttt gcttttcggc agcaacgacg tggtaaaaaa agtgaaagtt ctctccggcg
     9241 gcgaaaaagg ccgtatgctt tacggcaaac tgttgctgtt gaaacccaat gtcttggtca
     9301 tggacgaacc gaccaaccat atggacatgg aaagcatcga atcgctgaac atggcactgg
     9361 acaaatacaa cggcacgctg attttcgtct cccacgaccg tcagttcgtt tcctccctgg
     9421 caacccaaat catcgaactg gacggcaaag gcggatatga acactacttg ggcgattacg
     9481 aaagctatct cgagaaaaaa ggcgtagcat aagcgcaccc ctccggttga aacaatgccg
     9541 tctgaagccg cttcagacgg cattgttgat aactttaaaa taggaagcat atgcagactt
     9601 acctcgtcgg cggcgccgtc cgcgattatc ttttgggcct gcccgtcaaa gaccgcgatt
     9661 gggtggtcgt cggcgcagac gcgcaaacca tgttggcgca aggtttccag ccggtcggca
     9721 aagattttcc tgtattcctc catcccaaaa cgcacgaaga atacgcccta gcccgcaccg
     9781 aacgcaaaac cgccaagggt tacgccggtt tcagtttcca tgccgacaaa gacgttacgc
     9841 tggaacagga cttgatgcgc cgcgacctga ccatcaacgc gatggcgcaa gatgcggacg
     9901 gcaagattat cgaccctttc ggcgggcaac gggatttggc ggcaggcatt ttgcgccacg
     9961 tctcgcccgc cttcgccgaa gatcccgtcc gcatccttcg tgccgcccgc tttgccgcgc
    10021 gttacggctt tgaaatcgcc gaagaaacca taaagctgat gcggcagatg gtggaaaacg
    10081 acgaagcgga cgcattggtt gccgaacgcg tctggcagga gttggcgaaa ggtttgatgg
    10141 aaaaaaatcc gcgcaaaatg attgaaatgt tgcgcgaatg cggcgtgctc aaagtcttgc
    10201 tgcccgaagt cgacgccctc ttcggcgtgc cgcaacgcgc cgactaccat cccgaaatcg
    10261 acagcggcat ccataccctg atgacgctgc aacgcgccgc cgatatgggt ttgagcctgc
    10321 ccgaacgcta tgccgccctg ctgcacgact tgggcaaagc caaaacgccg cccgacatcc
    10381 tgccgcgcca ccacggacac gacatcaacg gcgtagaacc cgtgcgcgaa gtcaatcaac
    10441 ggctgcgcgc gccgaggcag tgtgccgagc ttgccgaatt ggtttgccgt tggcacatca
    10501 tcttccatca ggttgaaaaa ctccgcagca aaaccgttat cgacgtattg aaaaaaaccg
    10561 atgccttccg ccgccccgaa cgcttcgccg ccgcattaaa cgtctgcatt gccgacactc
    10621 aaggccgtct gaaccgagaa cacacgccct acccgcaacg cgcgcactgg ctcgccctgc
    10681 tcgaagccgc caatcaggcg gattcgggca aaatcgccgc cgaatgccgc gcgcagggaa
    10741 aagcgcactt tatcgccgaa caaatcgacc gggcgcggct ggcgcaaatc gccccgctgc
    10801 aaaaaacgtt tcggggcgcg taggaaaaag aaaacgccaa acgcggcatc ttttgaggtt
    10861 cgcccgcatt gccgaaacag cgtcggagaa agggatggat gacatcgatt tattcggctg
    10921 ccttttaata ttcccttgat gcaggcctga ttagtcggac aaaaatacct tttgttcaac
    10981 ggaaccgatt tctatccgga cggaaacagc cggctttccc cttgcaaacg gatggaatca
    11041 agcgggtatt caaacacagc cgtttatttt tattccgccg ccaagttatg ggatagggtt
    11101 tgcgtgtttc gggcaggcaa gccgcgcaac cttagacgca gtccgaagtt ttgaaggcgg
    11161 catccgggcc gggttttgaa acagccgccg ccatatccgc tataatccat ccttcagcca
    11221 ttccgccccc gacataaaat catgaccctg aaaaccgatt tattgcctaa aatcaacaac
    11281 gaagattatc aacgcctcat cctcaaacat agcgcggaat tcagcggcgg agaaacccgc
    11341 ctgttgaacg aaatcctcga aaaattcaat ttcgacgttg ttcaggcgca ggcattggcg
    11401 caggcggtaa tgcagcaagt tcgcttcgac cccaatgcct accacatcga cagcgacgac
    11461 gaagacacca caggcatctg cccccactgc atcaacccgc ctatgccgcc cctgcgcgac
    11521 tatctcgttt ggcgcgaaac acgcggataa aacgcttttg accgttatct tttcaatgcc
    11581 gtctgaaacg cgccgccgac cgttcggacg gcatacccga caaagggaac actatgctgc
    11641 aaaccgacaa cctgaccgcc gcgcaaccgc aacgcatcgt tgccgcccaa accgcctccg
    11701 cacaggaaga actgctcgaa cgcgccctcc gccccaaaac gctggacgac tacatcgggc
    11761 agcataaagc caaagagcag ctcgccatct tcatccaagc cgccaaaaaa cgcggcgaag
    11821 cactcgacca cgtcctgctt ttcggcccgc ccggactggg caaaaccacc cttgcccaca
    11881 tcatcgccaa agagttgggc gtaaatttgc gccaaaccag cggccctgtc ctcgaacgcg
    11941 ccggcgacct cgccgccctt ttgaccaacc ttgatccgca cgacgtattg tttatcgacg
    12001 aaatccaccg gctaagcccc gtcgtcgagg aaatcctcta tcccgcgctc gaagactacc
    12061 ggctcgacat tatgataggc gaaggacccg ccgcacgttc cgtcaaaatc gacctgccgc
    12121 ccttcaccct cgtcggcgcg accacccgcg ccggtatgct gaccaacccg ttgcgcgacc
    12181 gcttcggcat cgtctcccgc ctcgagtttt acgaaaaccg cgaccttacc accatcgtca
    12241 gccgttcggc acaactgttg cagctcgata tgggcgaaga aggcgcgatg gaagtcgcca
    12301 aacgcagccg cggcacgccc cgcatcgcca accgcctgtt gcgccgcgtg cgcgatttcg
    12361 ccgacgtgaa aaacaacggc gtaatcgatg ccgccgtcgc cgatgccgct ttaagtatgc
    12421 tggacgtgga cgcgcagggg ctggacgtga tggacaggaa attcctcgaa gccgttttgc
    12481 acaaattcgg cggcggcccc gtcggtttgg acaacgttgc cgccgccatc ggcgaatcta
    12541 cggacaccat cgaagacgtt atcgaaccct acctcatcca acaaggcttt ttgcaacgca
    12601 ccccgcgcgg caggatggcg accgaacgcg cctacctgca tttcgggctg cccgtcgaaa
    12661 aataaaccat gccgtctgaa accgaaccgg gtttcagacg gcattgttat cagacgtttg
    12721 caccggcacc ggtttcatca cttaacagaa accttttgtc cggcaggaca gattctcccc
    12781 gatgaaaata actgtttccc tggcaaacgg ttgaaacccg tctggctgcc ggttgaaaaa
    12841 taacgcaatg ctgtctgaaa cagagctaat tttcagacgg catttctatt tcaatcattg
    12901 gctcaaggtt cagcctgccg ctttttccag ttccgccctc atcgcagcga ttaccgcctt
    12961 gtaatccggt ttgccgaaaa tcgccgaacc ggcaacaaag gtatccgcac cggctcgggc
    13021 aacggcggca atattgtcag ttttgatgcc gccgtccact tcaatggcaa tacgtctgcc
    13081 gcttttccct tcatagcggt caagcatggc gcgaacctgt ctgatttttt ccaaagtgtg
    13141 cggaatgaag ctctgaccgc cgaacccggg gttgaccgac atcagcaaaa ccatatccag
    13201 cctgtccaac acgttttcca acacatatac gggcgttgcc ggattcaaca ccagccccgc
    13261 ctgacagccc atgtcccgaa tcaggctcaa gctgcggtcg atatggcggc tcgcttcggg
    13321 atggaaagtg ataatcgatg ctcctgcttt ggcaaacgat tgaattaaat cgtcaacggg
    13381 ttcgaccatc agatgcacat cgatcggcac gcttgcataa ggcttcaacg ccgcgcagac
    13441 cataggtccg aaggtcaggt tcggcacata atggttgtcc atcacgtcaa aatggatcag
    13501 atccgcaccc gccgcaatga catttgccac ctcttctccg aggcgggcaa agtctgccga
    13561 caaaatactg ggtgcgatac ggtaggcggt catatttttt ccttcaatgc ctttatgggc
    13621 ggactcaacg cgggaaagcc tcgaaacagc attattaaca aaagttaact gccataatac
    13681 catctttcac acggcaatca agtatattgt ccgaaatatc cggattaaag gaaaagccgt
    13741 gccgctgcct gctccctgcc gttttgccaa acctgccgcc tcttttttaa gtatggcttt
    13801 gctttcctgc cagctttccc acgccgccac ggcttatatc cccccgaacg attttcaacc
    13861 gaactgcgac atacgccggc tcgggctgac acagggtcag cacaatgagc tgcgtaaaat
    13921 ccgcgccgcc ttcaaaatgg cgggcgacag ggcgcgtttg aaggttatgc attccgaaca
    13981 cagccgccgc cgctctgtcg tcgaaatcat ttcttcggat gtttttaatc ggaacgaggc
    14041 gcgcgattat gtcgaaagcc gctaccactc cagcatggat tttgcggtgg acgaattgga
    14101 aatccaacac cgcttcttcc atattctcac accgcaacag cagcaaatgt ggctttcttc
    14161 ctgcctcaaa taatccccga aacactcacg gcgcacgttg ctccggcagc ctgcccgccc
    14221 agtcgcaggc aaactgccaa gcggaacgtc ccgagcggtt gccccgcatc tgcgcccact
    14281 gcaacgccgc cgtccgggcg gcttcgtcat atggcacatc aaaatcttcc aaccagcttc
    14341 gcactgccgc cagataatcg ttttgatcga acggataaaa actgagccac aatccgaatc
    14401 ggtcggacaa agatactttt tcttccacgg cctctttttg atggatttct ccgcgcacgc
    14461 ctgtcgtacc tgcattttca tccaaatatt cgggcatcag atgccgtctg ttggaagtcg
    14521 cgtacaccat cacgttggcg caacgttggg acagaccgcc atccaatgcc gttttcaatg
    14581 ccttataggt ttcgtcgccg ctttcaaatg acaaatcgtc gcaaaacaca atgaattttt
    14641 ccgggcgttc cttcaaaagt gtcaacagat acggcaggcc gatcaaatcg cttttatcga
    14701 cttcgatcag gcgcaatccc ttatccgcat attcgtgcag cagggctttg accagcgagg
    14761 atttgcctgt tccgcgcgcg ccgctcatca atacgttatt cgcaggtctg ccggcaataa
    14821 attgttcggt attacgcacc agcaattcgg tctgcctgcc gactccggca agccgcgaca
    14881 aagggaaaac gtgcggatcg ggcaagtgtt ccaaaaaacc ttttttgccc gcactctgcc
    14941 agcggaaggc aagcgcgttc caatccgtat gcccgggttc gggcggaagc acggcatcca
    15001 aacgccgcaa aacggcatag gctttatcga ggaattcgtt caattccatc tctacctcac
    15061 tttgcatatc tttgcgccat cagccgttcg acggtgtcga cgattgcctg cgtattcgga
    15121 tcgatttcga tgttgatcct gtctccggcc tttctgctgc cgaacagcgt ccgttccaaa
    15181 gtttcgggaa tcagatggac attgaaacgg ctgtcttcga ctttgcctat ggtcaggctg
    15241 caaccgtcca agccgacgaa ccctttggtc aggatatagg gtttgagttc gtgcgggagc
    15301 gcaaaccaaa ccgtgcggtt gaacccgtcc cgttcgattt cgacaatggg cacggttgcc
    15361 ataatgtgtc cgctcatgac gtgtccgccg atttcgtcgc cgaaacgtgc cgcccgttcg
    15421 atgttgacgc aatcgccttc cttcagcagc cccaaattgg tttttgccaa agtttctgcc
    15481 attaaatcga agctgacgcg gtttccttcg atttcagtaa tcgtcaggca gcagccgtta
    15541 ttggcgaccg atgcgccgtg ttgcaggttt tctgccgcct cttgcggaag ctcgacgaca
    15601 taagtctgaa acgcctccga cgggcggtgg attgccgtca gttttcccaa tccttgaaca
    15661 atgcctgtaa acataatcct gtttccctgt gtcggtaaaa atggtgcaaa ttgtagcatt
    15721 tccccgcgaa aaatgccgtc tgaaactcct tcagacggca ttgtgcctcc ggttcgggca
    15781 aaaaccgccc ggtacgcctt gacctttcct ttccgcgcca gtcggcggtc ttgcacttat
    15841 ccctcctgca aatcggtttg cgtgttcaag tcggcaaaat gcccgtcaaa ctcgaatctg
    15901 accggccgcg ccctttgctg ctgcaaccag cttcttaatg ttttcatacc cgaaaacaga
    15961 taaggaatcg cgctttgcag aatttgcgga cggatataca taatgttgta gtgcatcgtt
    16021 accggcgttt ccacataaaa cgcattgcac aacggtgtgc gtttggagac gctttcaaag
    16081 cgcgcgacca aatcgtccgg cagatacggc atatcgcaag gtacaatcag cagccaatcg
    16141 accgccgcca actgcaaatc gttggctgcg gtacacaatg ccgaaagcgg gccgaaatgc
    16201 tgccactgcc gggcatccgg aaaaacatgc gggctgcggc gggcgtattc ttccaaattc
    16261 cggttggcac tgatgacgat atggctgacc tgcggcctga ttttaccgat aacgcggtca
    16321 atcagcggtc tgccttccaa cagtgccagc cctttgtctt ccccgcccat acggtcggcc
    16381 aggcctcctg ccaaaatcaa tgcgaacgtt tttaatgcgg gcgggctttt gggaaagttt
    16441 gaggttttca tagtttcagt ctgccgtttc cgatatttta gaagcgcgtt tgaaaacggc
    16501 gtcgtataaa ttcatgttat ttgaatttta tcataacgtg atttaacact gaaagcattg
    16561 aggcttaagt tttccttaac ctgtcctttc tgagcagttg tttctaattc caaagaatga
    16621 tattgtttgc accgtttaaa acgactttcc tccgaatatg atactgccaa cccgattttc
    16681 agacggcatc cccctttccc tgcgcctgaa actcctgacc ggcttgtggg tcggtttggc
    16741 ggcactgtct gtcgttttaa ctctgctgct ttctttccgc ctggaaaatg ccgcctcggt
    16801 catcgaagag gcgggcaatc tgaagatgca ggcataccgg cttgcctata tggcgggcga
    16861 aggctcgccc cgcgcacaaa tcgacaatca gattgccgaa tttgaaaaaa gtttaaaacg
    16921 catttcccaa agcgatgcca tccatccgct gattccctcc gacaatcccc ttgcctacga
    16981 tttgatacag tccatgctga ttatcgactg gcaggccaac atcctccccc cgttgcaggc
    17041 ataccgccgc cccacacaaa tcgagcttta ccgctttgcc ggcaatatcg aactgttttt
    17101 gcaggcgttg gaaaatgccg gcgaaaaaaa cacttggtgg ctcaggcggt ttcaatgggt
    17161 cattatgctg atgacgctgg tgtcgtccgt gctgatgctt ttttggcacc agatttgggt
    17221 tatccgtccg ctgcaggcgt taagggaagg tgcggaacgc atcggtcagc ggcatttcga
    17281 catccctgtt cccgaagacg gtacgcccga attcaaacag gtcgggcggt gtttcaacca
    17341 aatggcgctc aggctgaaga ctttatacga tgatttggaa ggacaggttg ccgaacaaac
    17401 ccacaacctt gaaaagcaaa accgcaacct gaccctgctg taccggacca cgcgcgacct
    17461 gcatcaatcc tatacgccgc gacaggcggc ggaagaattt ttgaaccaca tcctgcccgc
    17521 cgtcggcgcg caatccggca acatctgcct ggaaaacggt tccgacacag acatttccgt
    17581 ccatacggcc gaacacggca aaaagccccc tttggaaaaa taccatgacg aaaccttccc
    17641 catcgaatat caaaacgaga aactgggcat gctttcgctc ggcttttcag acggcacttc
    17701 cctcaccgga gacgaccgca cgctgcttca aaccctgatt cggcaattgg gcgtatcgct
    17761 cgccggggcg aaacaggagg aagaaaaacg tctgcttgcc gtattgcagg aacgcagcct
    17821 gattgcacag gggctgcacg acagcatcgc gcaggcatta accttcctga acctgcaggt
    17881 acagatgctg gaaaccgcct ttgccgaaaa caaacgggag gaagccgcag aaaacatcgg
    17941 ctttatcaaa acaggcgtgc aggaatgtta tgaagatgtc cgcgaactgc tgctcaattt
    18001 ccgtaccaaa atcagcaata aagaatttcc cgaagctgtt gccgacctgt tcgcgcgctt
    18061 cacgcaacaa accgggataa cggtcgaaac cgtttgggaa aacggttcgt tcctgcctac
    18121 acaggacgag cagctccaaa tgattttcat cctgcaagaa agcctgtcca acatccgcaa
    18181 acacgcccgc gccacccatg taaaattcac cctttccgaa tacggcggac gctttaccat
    18241 gaccatccaa gacaacggac aaggtttcga cacggagaaa ataggagaac ctacgggcag
    18301 ccatgtcgga ctgcacatca tgcaggagcg tgccaaacgc atccgtgccg ttttagaaat
    18361 ccgttcccaa gcacaacagg gaaccaccgt ctcattgacg ggcgcaccca aagaaagcct
    18421 accatgacca tcaaaatcat cctgatagac gaccacaccc tcttccgcag cggcatcaaa
    18481 gcccttttgt cgcgccaaca cggttttgaa gtcatcggcg aagccgcaga cggactctcg
    18541 ggcatcaaaa tgatcagtcg gctgcaaccc gatgtcgtcc tgctcgattt ggatatgcca
    18601 ggcatgaacg ggcgcgaggc cttgtcccaa atcatcagca tcaatccgca gcaggcagtc
    18661 attatgctga ccgtttccga agacagcgac gaccttaccg aatgtatgcg catcggcgcg
    18721 cgcggctacc tgctgaaaaa catcaacgcc gattttcttc tcgaaagcat acgcaaagcc
    18781 gccgaaggcg ataatgtatt ctcgcccgag atgaccgcca aactcgtcaa aagcctgatt
    18841 tccccccaac ctgcccaaag gacgcaggca ctctcctcac ttacccctcg tgaactggaa
    18901 atcttgggct atctcgccgc aggacacagc aacaaaatca tcgcccgcca cctcgatctt
    18961 gccgaatcca ccgtcaaagt ccacgttcaa aacctgctcc gcaaactcaa cctcagcagc
    19021 cgggtgcagg ccgccgttta cgccatccgg cacaacgtcc cccaacctgt gccggaatag
    19081 acgttcagac ggcatcgggt caggaaaaaa gcaatgcgcc cctttgacgg ggtgcaatat
    19141 ataagggacg gcatccggtg tgccgtccct ttaagtacgc cattaccgcc gtaacccgga
    19201 cggaatggct taggcagttt atttccaaga atatttcaca cccacggtgc cttggtagcc
    19261 tttatgtctg ttgcttccgc atcctgccga taattgcctt gcctgtcccg agaaagggtt
    19321 tgattttcgc cacggcgttg gtggagcgta tccagcatcg catagcctga ttccaagttt
    19381 tgacgtggaa cgagtgcgta ggccggtgcg cttggcgtga tgatggtttt atcttgattc
    19441 ggcgtggtta aagtccagaa gtattctgtc gcgcccgcct catctttgtg tgaaaccaat
    19501 tgcaattccc ccgcccctgt ggttttggca gttccgctaa aagtatcgcg cattgtgtag
    19561 gtatgtttag cgtcttcgat atttaattta ccggtttccg cccccttgtc ttgtcccaaa
    19621 accttaacaa cggcggcact gcgtttgtag cggtcggaaa gttcgccgat cgagccgtcg
    19681 ataatatttt ctttgccatc tttacccact gaaatgaccg ttgtttttcc tgaagcatcg
    19741 cctgtgattt ccagtaaatc agattgagaa tttcctcctt gatcatcacc cggcgagttc
    19801 cattctgtat tgacttttaa cacaccgtct ttaccgacat aatttccttc aatggtgagt
    19861 ttgtctgcat aggattgatt ggcaagcgta atgatgccgc cgttggtgaa tgttcctttt
    19921 tcaaatacag aagttgtacc cgataaagaa atacctgtat tagatagggt tagcgtgccg
    19981 cctgataata atgtagtccc ttcgggggtt gttaatgatg tgtctttttt taggtgaaaa
    20041 gtagcttttg ttagttttat ggttccaata tcttctgatt tgaattccat tgcgccattt
    20101 gtaattttta gcacagcatt ggtaataggg aggaggaagc gcattgtaaa tgatttttct
    20161 gttccatctg gattgattaa tgtaccagat gcgccaaaga tctctccttc agggatagaa
    20221 acagttccat cagaaattga tggtttattt gcgcttttat cactgtgttt atgaattaat
    20281 gtaattgggg ctgtactaga ttatccctaa attccacacc aatcccgcag gatttttagc
    20341 tgccgggacg gtgtgccg
//
LOCUS       DAXGCP010000032        20189 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.032, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000032 DAXGCP010000000
VERSION     DAXGCP010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20189)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20189)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20189
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.032"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            158..535
                     /locus_tag="ACFJCW_001006"
     CDS             158..535
                     /locus_tag="ACFJCW_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HFC4151178.1"
                     /translation="MCEFKDFRRNIPCFEEYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRRKYPYPMDIPRDIVIGIGTIIEFLMVPNWKLFTIKSSPWLPDSVGIHERYERFT
                     TMLRYIFTEKDIVNVRFDYYNKK"
     gene            complement(599..2812)
                     /locus_tag="ACFJCW_001007"
     CDS             complement(599..2812)
                     /locus_tag="ACFJCW_001007"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC4151179.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPDNDKNLIGTAWSLA
                     QEHYPADAATPYGEPLPDHFLGAAQMVDELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATSEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLDILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSGKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSATTIVKQSKIKKGGKTGVLIDGEDGLMTTLAKCCKPAPPDDIAGFVTR
                     ERGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLAGLGDVKGVLSVTRL"
     gene            2955..3596
                     /locus_tag="ACFJCW_001008"
     CDS             2955..3596
                     /locus_tag="ACFJCW_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HFC4151180.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEVVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVCHFDREGRLKDEVRPEIQAWLDKVGGYNNKLVQPRL
                     IKIGLPEFVTPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGTSD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
     gene            complement(3668..4306)
                     /locus_tag="ACFJCW_001009"
     CDS             complement(3668..4306)
                     /locus_tag="ACFJCW_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HFC4151181.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCIAASGP
                     LSNLAMAVLWGVVLVLTPYAGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLPAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            4562..5413
                     /locus_tag="ACFJCW_001010"
     CDS             4562..5413
                     /locus_tag="ACFJCW_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HFC4151182.1"
                     /translation="MDKERILTPAVVFSVALLHLAIVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGGGAPEGAGAPAAPEPQPAPDPPKPVEPPKPVLKPAVTKKADADIQQPKEK
                     PKPEEKPKPEPEPEAKPAPKPAEKPAEKPSEKPAEHSGNASAKAGSEQGNGEGKGTGT
                     KGDGTGRGEGSGKGSGGAKGEHGEGAGGSGGGTGVGSSKGNPLRANGSIPRPAYPALS
                     MENDEQGMVVLSVLVSPGGHVESVKVVKSSGFSRLDNAARKAAQNGHFQANAWTEFKV
                     PVKFELN"
     gene            5479..6141
                     /gene="exbB"
                     /locus_tag="ACFJCW_001011"
     CDS             5479..6141
                     /gene="exbB"
                     /locus_tag="ACFJCW_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HFC4151183.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSTVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            6144..6578
                     /locus_tag="ACFJCW_001012"
     CDS             6144..6578
                     /locus_tag="ACFJCW_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HFC4151184.1"
                     /translation="MAFGSMNSSDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQANKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(7079..7507)
                     /locus_tag="ACFJCW_001013"
     CDS             complement(7079..7507)
                     /locus_tag="ACFJCW_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HFC4151185.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(7572..9320)
                     /locus_tag="ACFJCW_001014"
     CDS             complement(7572..9320)
                     /locus_tag="ACFJCW_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HFC4151186.1"
                     /translation="MIHYKIAPSPLDHEWHILLKFTQDNDFPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHTAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPPEWRIATTLPETGRLVFQTASYDELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRDRLVSDIKKICETELAMFSSPAPFEKY
                     LFLLHVGDHIYGGLEHTDSTALLADRHSLPPYGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPEFYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTVMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLTDFFQTALYSTEDLPLAEC
                     LATTGVKLTFLPLPRQHGGGYAEHIFPIPPTGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFAAQWARYHVRAKINIHFFRAGILRQTILTVQATAADTA
                     ILHITDRNLLENWLFG"
     gene            9646..11079
                     /gene="ccoN"
                     /locus_tag="ACFJCW_001015"
     CDS             9646..11079
                     /gene="ccoN"
                     /locus_tag="ACFJCW_001015"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HFC4151187.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKVKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYMIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            11106..11717
                     /gene="ccoO"
                     /locus_tag="ACFJCW_001016"
     CDS             11106..11717
                     /gene="ccoO"
                     /locus_tag="ACFJCW_001016"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HFC4151188.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            11722..11892
                     /locus_tag="ACFJCW_001017"
     CDS             11722..11892
                     /locus_tag="ACFJCW_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HFC4151189.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDDAANSIFAE
                     NQDAQDKKSENR"
     gene            11916..13235
                     /gene="ccoP"
                     /locus_tag="ACFJCW_001018"
     CDS             11916..13235
                     /gene="ccoP"
                     /locus_tag="ACFJCW_001018"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
                     /protein_id="HFC4151190.1"
                     /translation="MNATSQFTSNFWNIYIAVIVLLSFIALAWLLLSQNVVKRPKKGE
                     EVQTTGHEWDGIAEYDNPLPRWWFWLCVLTWLFGIGYLVMYPGVGDYKGLLKWTSHNQ
                     YEKEVKKADEQYGKLYAKFADMPIEKVAKDPQAKQIAQNLFNTYCIQCHGSDAKGSKG
                     FPNLTDSDWLWGGDPDKIHETIEKGRVATMPAWGPALGEEGVKDVAHYVMSLSKPKGQ
                     YDEERAARGQALFSGPPANCFTCHGDKGQGIQGLGPNLTDDVWLWGGTQKSIIETITN
                     GRSSQMPAWGHFLDKDKLHIMTAYVWGLSNKDGKAPVKKAEPAPAAEPAPSAPAEAAQ
                     AASEAKPAVAEPKAEEKAAPAAKADGKQVYETVCAACHGNAIPGIPHVGTKADWADRI
                     KKGKDTLHKHAIEGFNTMPAKGGRGDLSDDEVKAAVDYMVNQSGGKF"
     gene            13580..14989
                     /locus_tag="ACFJCW_001019"
     CDS             13580..14989
                     /locus_tag="ACFJCW_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HFC4151191.1"
                     /translation="MDTQIKTEAGQQNNRHYLSVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVFPQAVVQPLSVQAEAARGAINPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVNTMPRNQGWYHTMDEIHGDMMLGAAGDYLLETAASL
                     TIIMVVSGLYLWWAKQRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNGGKVKEVPWILELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVVFCLAV
                     IFIGISGCVMWWKRRPSGVAGIVPPAQKIKLPVWWAMALPLLLIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRKWFK"
     gene            15090..18299
                     /gene="recC"
                     /locus_tag="ACFJCW_001020"
     CDS             15090..18299
                     /gene="recC"
                     /locus_tag="ACFJCW_001020"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HFC4151192.1"
                     /translation="MFYLYQSNRLESLAALFARIQKVKPLKCALQPEQIVVQSQGMRR
                     YLNTCLARDLGVAANLAFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSA
                     EFQNGAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILG
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLAALDKDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMHWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEEETPVFEEGGRDTLLHALQTDIQNLKMPSETVGSVNTGDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIEPYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYALECVSDLLESRFEVGKVLALLETAPVLRRFGLTGDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAAERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTAMFGRFAAFLETLSDIARIWRQPATVGEWVARCRDLLETLFQAGPDDQKAVQNLE
                     NEWVKWQEESTLAGFFGQLPQQTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLVAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYAAALGQTPEPPRPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFDPQHAEQIAETYIGARREGQDFSQTAARIAAESLLPSG
                     ELGRLWQQDFQTAAKQIDTSVLNSPKLPPFPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRVAFLLEHLIFCAVMPSEAETRQTFIVQSGETEVLAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKARTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLARLLADTLAAAEKREGTGAA"
     gene            complement(18367..19935)
                     /gene="mtrF"
                     /locus_tag="ACFJCW_001021"
     CDS             complement(18367..19935)
                     /gene="mtrF"
                     /locus_tag="ACFJCW_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HFC4151193.1"
                     /translation="MSQTDARRSGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAVG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAVI
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTLDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVTSTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVAGSPFLKSIVVFIFLLFALPGIVYGRIT
                     RSLRGEREVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGAVFLKEVG
                     LAGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVMKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTLYPAP"
BASE COUNT         4885 a         4839 c         5606 g         4859 t
ORIGIN      
        1 tacaagcatg ggaagcaaaa gggaaaattg ttactatcat tgccgggggc aaagacaatt
       61 attcgacaga accttactac gatgaataac attacagaaa agaaacaaga aacggtacat
      121 ttgataaaaa cctaaatcgt attggagatt aattattatg tgcgagttca aggattttag
      181 aagaaacatc ccttgttttg aagagtatga cgaaaattca tttattggta aatggtatga
      241 tgacggggtg tgggatgatg aagaatattg gaagctggag aatgatttaa tcgaggttag
      301 gagaaaatat ccttatccga tggatatacc aagggatatc gtgattggaa tcggtaccat
      361 tattgagttt ttaatggttc caaattggaa actttttaca attaaatctt ccccttggtt
      421 gcctgatagt gtgggaattc atgaacgtta tgaaagattc acaacgatgc tccgttatat
      481 ttttaccgag aaagacatag tcaacgtgcg atttgattat tacaacaaaa aatagcaaaa
      541 cccggcaatc aaaatgccgt ctgaagcgtt atccggcttt cagacggcat ttttgtattt
      601 aaagccgggt aacgctcaat acgcctttga catcgccgag gccggcgagg acgcgcggga
      661 ggtcgttgac ttgtttgact tcgagcgtga acctcatgct ggcttccaag tcgcgggact
      721 gggtttgtac ggcggtaacg ttgagtttgt ggcgggcgag cgcgtcggat acgtcgcgca
      781 aaagcccgga gcggtcttgg gcgcggattt cgatatcgac ggcgaacact tgcccttcct
      841 gcaacgccgc ccaacttgcg tccagtactt tttcgggcgc gtgttcggca aggtgtcgga
      901 aagaggggca ggttttgcgg tggacggaaa tgccgcgctc gcgggtaacg aagccggcaa
      961 tatcgtcggg cggcgcgggt ttgcagcatt tggcaagcgt ggtcatcaag ccgtcttcgc
     1021 cgtcgatgag cacgccggtt ttgccacctt ttttgatttt ggactgtttg acgatggtgg
     1081 ttgcgctgac gggcacgggc ggcggttcgt tcagcgtgcc gcaggctttt tggatggcgc
     1141 ggttggaaat ttcgccttgt ccgacggcgg tgtagaggtc ttctggcttt ttgtagccga
     1201 gattttcggc aagctcttgc aggttgggtt tgggcgtgag tttggcaagc tgcttgtcga
     1261 gttggacacg gccttcttcg cgcacggtgt cggcgttttg ctggcggatg taggcgcgga
     1321 ttttgccgat ggccttgccg gatttgaccc agccttcgta aagccagttg acggaaggat
     1381 gcccttcttt ggcggtaatg atttcgacgc gctgtccgtt ttcgagcggg gtggacagcg
     1441 gcacaatctg cccttcgact ttcgcgcccc ggcagcggtc gccgatgctg ctgtgcaggg
     1501 cgtaggcgaa gtcgatgggg gttgcgcccg ttggcagaga gaggactttg ccgtgcgggg
     1561 tcaaaacata aatcgtgtcg ttgaaaagct cggttttgaa ggcggcggcg aggtcttcct
     1621 tgccgctttc cgccatattt tcgcgccagt ccaagagttg gcgcaaccag gcgatttttt
     1681 gttcgtaggc ggaatcgcct ttgccgcctt ctttgtaacg ccagtgggcg gcgacaccga
     1741 attcgttgaa ttggtgcata tcgaaggtgc ggatttgcac ttccacacct ttgtcttccg
     1801 ggccgacgat gacggtgtgc aaacttttat aaccgttgcc tttggggttg gcgatgtagt
     1861 cgtcgaactc gccgggaatg ggctgccaga ggctgtggac gatgcccagc gtggtgtaac
     1921 actcggggac ggtatcgacc agaatccgca cggcgcggat gtcgaacagg ccgtcgaagc
     1981 tgagtttttt cttcaccatt tttttgtaaa tggagtagat gtgtttcgga cggccggcga
     2041 cttcaaagtg gatattgtat tttttgagtt ccgtacgcag gatatcgagg aagttttcga
     2101 tgtattcgag gcgttcggtg cgtttttcgt ccaaaagcag ggcgatttcg cggtattttt
     2161 cgggttcttg atggcggaag cccaaatctt cgagctgcca tttgagctgc cacacgccca
     2221 agcggttggc gagcggggcg aagatgtcga gggtttcttt ggcgacggcg cgtttttcgg
     2281 ggctgtcggg ggcgttgctt aaaaattgca gggtgcgcgt acgcatcgcc agtttgatta
     2341 atacgacgcg gatgtcggta accatcgcca gcagcatttt ccgcatggtt tcggcttgct
     2401 gcgcgcgctc ttcggaagtg gcgaggctgt ccacccgggc gaagtgggtg agcttctgca
     2461 cttcgtccac acctttgacc agctcggcga cggtgctgtt gcagcgctcg gaaaccaata
     2521 ggttccaatc ggggacgtag cgtccgatgt cggcaagcag ggtggcggcg acggcatcgg
     2581 gcagcaggtc gagttcgtcg accatttgcg ccgcgccgag gaagtggtcg ggcagcggct
     2641 cgccatacgg cgtggcggca tcggcaggat aatgttcctg cgccagcgac catgcggtac
     2701 cgatgaggtt tttatcgttg tccggcagag cggcgcagta gctgtcgaac cattcgcgca
     2761 attcttgcag ggtcgcgctt tgcgtgtctt gaatcgggct gatggcggtc atgatgggat
     2821 cttccgttcc gataaaaacg agttcattgt aacagcttat ttatttacgg tgcataggcg
     2881 ggaagataaa cttgtttcgg gcggcgccgg gtgttaaggt agccggtacc gacaggttga
     2941 cgaggaatat tttgatgaaa ctgtatattt acgaccattg cccgttttgc gtgcgtgcgc
     3001 ggatggctgc cgggctgttt ggtgctgacg ttgaagaagt cgtgctggca aacgacgacg
     3061 aggcaacgcc gatcggtatg atcggtgcga aacaagtgcc cgtcctgcaa aaagaagacg
     3121 gttcgtttat gggcgagagt ttggacattg tgtgccattt cgaccgagaa ggccgtctga
     3181 aagacgaagt ccgccccgag atacaggcgt ggctggacaa ggtaggcgga tacaacaaca
     3241 aattggttca gccacgcttg atcaaaatcg ggctgcccga atttgtaacg ccggaagcgg
     3301 tgaaatattt cacagacaaa aaagagaaaa gcatcggcag cttttccgcc aatttgaata
     3361 aaaccgccca ataccttgaa cggataaacg cagatttgca agagttggag aatttgatgg
     3421 acggtacttc agacggcatc aacggtggaa tcggtatgga ggatattttg gttttccccg
     3481 ttttgaggaa tctgaccgtg gtgcgcggca tcgcgttccc tcggaagacg atggattatt
     3541 taatcggtat gagtgaaaaa tcaggcgtgc cgctttattt cgacagggca ttgtaaaacc
     3601 aaaaaaaagc ggcagggcaa tatgtccttc cgcgtttttt ggaacgttta tgccgtctga
     3661 gagccagtca gacgaacatc tgcacaaacg caatcaccag ccgcacaatc ggtgcaataa
     3721 acgcacccaa aaccccggtc agcataagca gcaggataat ccacgtccca taaggttcga
     3781 ttttgcggaa cgcttgcgaa tatttcgccg gcaggaaggt gtcgatgaaa atgccgccgt
     3841 cccaaggcag gatggggatg atgttgagcg cgaacaaaat cgcattgatc agaataccgt
     3901 agtttgccat ttgagccagc ggcatctgat acgccccgcc ggcatacgga gttagcacca
     3961 aaaccacgcc ccacagaaca gccatcgcca gattcgacag cgggccggac gcggcaatgc
     4021 aacgccatgc aaggcgcggg ttgcggaagt tgcgcgaatc gataggaatc ggacgcgccc
     4081 agccgaacag gaagggcgtg aacatcaaag taagcagcgg tacgatgatt gtgccgacca
     4141 aatcgatatg gggcaggggg ttcagtgtca gcctgccgta ttgttcggca gtgttgtctc
     4201 cccagtagcg cgccgtatag ccgcgcgcca cctccctgac ggtaatggcg agcagcacgg
     4261 gcaggacagc aagcagaaac acgcccaagt caaaattttg aaacatggtt ttcctttgaa
     4321 cagatgtggt gtgcagcccg aaacggctga cagacagaag cggcaatata tcatctaacc
     4381 tgattttatt ggaataagaa atcagacgga atcatttttt ctgccggccc gttatctgat
     4441 gatttgctgt aataccgcgt ttaaacacgg tttgcctatg aatggagcag gcgttcacat
     4501 gacaacaaat tataaaaaat aggttgcaaa taggaattgt tgctattatt atgcccgaat
     4561 tatggataaa gaacgaattt taacccccgc agtcgtgttt tccgtcgcac tgctgcattt
     4621 ggcaatagtg gcattgctct ggcaggcgca caagctgccc gtgatagagt caggaaatgt
     4681 tatcgaattt gtcgatttgg gcgattttgg cggagggggc ggcgcacccg aaggcgcagg
     4741 cgcgcctgcc gcgcccgaac cgcaacccgc gcccgatccg cccaaacctg tcgaaccgcc
     4801 caagccggtt ttgaagccgg cggttacaaa aaaggcggat gcggatattc agcaacctaa
     4861 ggaaaagccg aaacccgaag aaaaacctaa gcccgaaccc gaaccggaag cgaagcctgc
     4921 cccgaaaccg gcggaaaaac cggcagagaa gccgtctgaa aaacctgccg aacattccgg
     4981 taatgcttct gccaaagccg gcagcgagca gggtaatggg gaaggtaagg gaaccggtac
     5041 caaaggcgac ggaacggggc gcggagaagg cagcggtaaa ggaagcggcg gtgccaaagg
     5101 cgaacacggg gaaggagccg gcggcagcgg cggcggaacc ggtgtcggca gcagcaaagg
     5161 caatccttta cgcgccaacg gcagcatccc gcgcccggcc tatcccgcac tttctatgga
     5221 aaatgacgag cagggtatgg ttgttttgag cgttttggtt tctccgggcg gtcatgtcga
     5281 gtccgtcaaa gtggtgaaaa gcagcggttt ttcccgtttg gacaatgcgg cacgcaaagc
     5341 ggcgcaaaac gggcattttc aagccaatgc ctggacggag tttaaagtcc ccgtcaagtt
     5401 tgaattgaat taggcggttg tcgcggcagt ttgcggcagc ttggatgttt gattggtttt
     5461 ttcagtgttg gaatcattat gaatttgaaa ttagtgtttg aatcgggcga tcccgtcctg
     5521 atcggtgtgt ttgtgttgat gctgttgatg agtaccgtaa cgtggtgtct ggttgtcttg
     5581 cgctgcatca agctgtatcg ggcgcgcaaa gggaatgccg ccgtcaaacg gcatatgcgc
     5641 gatactttgt cgctgaacga cgcggtcgaa aaagtgcgcg ccgtcgatgc gcctttgtcc
     5701 aaactggcgc aagaggcatt gcagtcttac cgcaactacc gccgaaacga agcgtccgaa
     5761 ctggcgcagg ctttgccgtt gaacgagtat ttggtcattc aaatccgcaa cagtatggcg
     5821 cagattatgc gccggtttga ttacgggatg accgcgcttg cctccatcgg cgcgaccgcg
     5881 ccgtttatcg ggttgttcgg cacggtttgg gggatttacc acgccctgat caatatcggg
     5941 caaagcgggc agatgagtat tgcggcggtt gccggcccga ttggcgaggc actggtggcg
     6001 acggcggcgg gtttgttcgt ggcgattccg gcggtgttgg catacaactt cctcaatcgc
     6061 ggcacaaaaa tactgaccca ggatttggat gcgatggcgc acgatttgca tgtccgcctg
     6121 cttaatcaaa aggatagctg attatggcat ttggttcgat gaattccagc gacgattctc
     6181 cgatgtccga catcaacgtt acgccgttgg tggacgtgat gctggtgttg ctgattgtgt
     6241 ttatgattac tatgccggtg ctgacgcatt ccatcccttt ggaactgccg accgcgtccg
     6301 agcaggcaaa caagcaggac aaacagccta aagaccccct gcgcctgacg attgatgcga
     6361 acggcggcta ttatgtcggc ggggattctg caagcaaagt ggaaatcggg gaagtggaaa
     6421 gccgtctgaa agccgccaag gagcagaatg aaaacgtgat tgtggcgatt gcggcagaca
     6481 aggcggtgga atacgattat gtaaacaaag ctttagaagc cgcccgtcag gcaggaatca
     6541 ccaaaatcgg ttttgtaacc gaaaccaagg cgcaataaag ttcgacgctt gaacgaatgc
     6601 cgcctgaaag tctttcagac ggcatttctt atgtttaatc agttatatat agttgattaa
     6661 aacaaaaatg agacgacaga gcaccgtctc catttctgcg caggcgggaa tacaaacatc
     6721 tgatttttct tttattttca aacattactg aaatgggtaa gtctggagtc ctgcctgcgc
     6781 gagaataatg aaaatgtgca tttctaattt ttatagtgga ttaacaaaaa tcaggacaag
     6841 gcaacgaagc cgtagacagt acaaatagta cggaaccgat tcacttggtg cttcagcacc
     6901 ttagagaatc gttctctttg agttaaggcg aggcaacgcc gtactggttt ttgttaatcc
     6961 gctatacccg ctgtaaaaac ggagaaggac agaggacggc agtaaggttt gccgtcctct
     7021 ttttcaagtt gcggtggaat gccgcttgaa ggtgtggttt aaacgtttcg gcttgtaatc
     7081 agacgcgggc gttgtccagc cgctctctga agttttccag atttacacct gccgcttggg
     7141 cgcggcggat gatttcgtca accggcatac cttctgccgc ccggcggaag ccccacagga
     7201 gggagcagcg cgtaccggtc cggcaatagg caaggacggg atattcggct tgtccgatga
     7261 gttggcggaa ggtttcgaca tcgtgttttt ggatgtcgcg tgcggtaacg ggttggtgat
     7321 ggaatccggt aacgcctgct tgttccagcc actgtttgat ttgggcgaag tcgggttgcg
     7381 attcttcttc gcggtcgggg cggttgcaga tgacggtttt gatgccaagt tgcgcgattt
     7441 gttccgcatc ggctttggtc agttgcgggg agatgtagag atgttcgtca agtttgagaa
     7501 tcgccatttt gtttcctttg ctttgcggtt ggtgttcaga cggcattttg tgtgcaatgc
     7561 cgtctgaaag tttaaccgaa caaccagttt tccaacaggt tgcgatctgt gatgtgtagg
     7621 atggcagtat ccgccgccgt tgcctgaacc gtcaagatgg tttgacgcaa tatgcctgca
     7681 cggaagaagt ggatattgat ttttgccctg acgtggtatc gggcccattg tgcggcaaag
     7741 tcggtgcagg cataaccgtc taaagcaatg attttgtctt gcgggcacag tgccgcagat
     7801 tccgcacttc cgccgttgaa gacatgggtc aggacgatat ggtcggcgtt ttgtttgaag
     7861 cgtgcgccga aatcgcccgt cggcgggatg gggaaaatgt gttccgcata tccgccgccg
     7921 tgttgtcggg gaagcggcag gaaggtcagt ttcacgcctg tggttgccag gcattcggca
     7981 agcggcaaat cttcggtgct gtacaatgcc gtctgaaaaa aatctgtcaa atccaagccg
     8041 gtaatttcct gacaacggat ttgccagtgt ttttccggaa tacccgagtg tgtgtccctc
     8101 cactcccgat agagtttgtc cattaccgta tcaagggaat gtctgccgtt gcttcggttg
     8161 cgtattatca gatcaaggca caatgcggca agtgcgcctt tttggtagta gctgacgatg
     8221 gcgttggggc tgttttcatc cggtttgtaa aatttgttcc acgcggtaaa actcgattcc
     8281 gccaaggtct gcctcaaacg gccgcgggtt tgttgtacgc gcgtaatgcc ttgtgctagc
     8341 aggtttaaat aaaattcggg cgagatggtg cggctgcgtg ccaaaaacaa atcgtcgtaa
     8401 taggatgtaa tgccttcgaa tgcccatagt tgttcggtat agttttcttt gtcgaggtca
     8461 taaggggcga atgcggcagg tttgatggat ttgacgttcc acgcgtgaaa atattcgtgg
     8521 gagaaaagtc cgagcaatgt ggtgtaggca tcgtcggcat cggtcatacc gtacggcgga
     8581 aggctgtggc gatcggcgag caatgcggtg ctgtcggtgt gttccaaacc gccgtaaata
     8641 tggtcgccga cgtggagcag gaacaaatat ttctcaaatg gggcagggga ggagaacatc
     8701 gccagttctg tttcgcagat ttttttgatg tccgaaacca gcctgtcgcg gtcgaaatcg
     8761 ggatatatgc cgcttaaggc aatcgtgtgc ggaatgcctg ccgcctcaaa atctaaaaat
     8821 tcaatcaagc ccatctcgac aggtcggtca atcaattcgt cataagatgc cgtctgaaag
     8881 acaagcctcc ctgtttccgg cagcgttgtg gcaatacgcc attcgggtgg aatgcctgtc
     8941 aattccaagc ggtgcggcag cgtttccgtt ccttcgactt tcaaaaacag gcacgatccg
     9001 tcaaaaaaac cgcgttctgt cgtcaggaaa gaacctcgaa ccgacaaatc gaatgcatat
     9061 acggtgtagc ggatttgcca ctcgccgcgt acggcggcag tgtgccagcg gttttttgca
     9121 atttgttcga gcggcatgga cgtgccgttg caggatgcat ggatagaagt gatgtggcgg
     9181 gaaaaatccc gaatcagata gctgcccggc acccaattcg gaaggcttat ttctatagga
     9241 aaatcattat cttgtgtgaa tttcagcagg atgtgccatt catggtctag aggggacggg
     9301 gctattttat aatgaatcat aactatcaaa tatatcgtta aacgggatgg attaaatgcc
     9361 tttaaaatgc agcttaacct acatcaataa agtgccacaa aaagggaaaa ttggaaacaa
     9421 aagcaatggc ggccgggttg taatttatta taacaatatg atttatatgt aataaaaaac
     9481 agattaagca aagggttcgc cggcggcgcg aatgtaattc cgcttggcgt aataaggcag
     9541 atatgttaaa tttagaaaaa attatgcttg cccggattgc accttaaaca ggctgcggaa
     9601 gcggcaggat aaaaatcttt attcccataa ttcatggaga ctctcatgga cacacaaact
     9661 tacaactaca aagtggtgcg ccagttcgcc atcatgactg tagtttgggg gattgtgggc
     9721 atgttggtcg gcgttatcgt cgccgcccag ctttttgctc ctgccctcga cttgtctaat
     9781 atcggacctt ggttccactt cggccgcctg cgtccgctgc acaccaatgc ggttattttc
     9841 gcatttggcg gttgcggtct gatcggcaca tcatactacg ttgtccaacg tacttgtaat
     9901 acccgtcttt tcggcggttg gctgccggca tttacctttt ggggttggca ggcggtaatc
     9961 gttgccgccg tcgtcagctt ccctatgggt tggacccaag gtaaggaata tgccgaactg
    10021 gaatggccga ttgacattct gattactttg gtttgggtgg cttacgccat cgtattcttc
    10081 ggtacgattg ccaaacgcaa ggtaaaacac atttacgttg ccaactggtt ctacggcggc
    10141 tttattttgg cggtcgcact tttgcacatc gtcaacaata tcagcatccc ggccggtttg
    10201 atgaagtcat accccgtcta ttccggtgcg attgatgcta tggttcaatg gtggtacggg
    10261 cataacgccg tgggcttctt cctgactgcc ggctttttgg gtatgatgta ctatttcgta
    10321 cccaaacaag cagcccgccc cgtttactcc taccgcctgt ccgtcgttca cttctgggcg
    10381 ttgattttca cctatatgtg ggcgggtccg caccatcttc actacactgc gctgcctgac
    10441 tggacgcaat ctttgggtat ggttctgtcc ttgattttgt tcgcaccctc ttggggcggt
    10501 atgattaacg gcattatgac cttgtccggc gcgtgggaca aactgcgtac agacccgatt
    10561 cttaaattcc tgattgtatc cttgtccttc tacggtatgt ctacctttga aggcccgatg
    10621 atgtcgatta aaacggtcaa tgcattgagc cactatacgg actggaccgt cgcgcacgtt
    10681 catgcgggtg cgttgggctg ggtaggcttt gtaaccatcg gttccgtcta ttacatgatt
    10741 ccccgtctgt tcggcaaaga gcagatgcac agcaccaagc tggtagaggc gcatttctgg
    10801 attgcgacta tcggtgtggt tctgtatatc gccgcgatgt ggattgcagg tgtgatgcag
    10861 ggtttgatgt ggagttctct gaacgatgac ggtacgctga cctactcgtt tgtcgaatcc
    10921 gtaaaacgca ccatgcctta ctacatgatc cgttttgcag gtggtttatt gtatctgagt
    10981 ggcatgtgca ttatggcgta caacgtgtac cgcacagcca tcggtggtaa agcagtcgat
    11041 gccgaaatcc ctgcggtttc ccaaacacag caccactaaa atactaagaa agataggcta
    11101 ccaaaatgaa attacaacaa ttggctgaag aaaaaatcgg cgttctgatt gtgttcacgc
    11161 tgcttgtagt cagtgtcggt ctgttgattg aagttgtgcc cttggccttt accaaggcgg
    11221 caacacagcc ggcgccgggc gtgaagcctt acaatgccct gcaggttgcc ggacgcgata
    11281 tttacatccg tgagggctgt tacaactgcc actctcaaat gattcgtccg ttccgtgcgg
    11341 aaactgagcg ttacggtcat tactctgttg ccggagagtc ggtttacgac catccgttcc
    11401 aatggggttc caaacgtacc ggtcctgatt tggcacgtgt gggcggccgc tattccgacg
    11461 aatggcaccg catccacctg ctgaatcccc gtgatgtcgt gcctgagtcc aatatgccgg
    11521 cattcccgtg gcttgcacgc aataaagtcg atgtcgatgc aaccgttgcc aacatgaagg
    11581 ctttgcgtaa agtaggtact ccttacagtg atgaggaaat tgcgaaagcg cctgaggctt
    11641 tggcaaacaa atccgagctg gatgctgtag tcgcctatct gcaaggattg ggtctggctt
    11701 tgaaaaacgt aaggtaacat catggatatt aacggtattc gcgctctttt cacggtatgg
    11761 atctttatct gtttcctgtt agtactctat atcgtcttca acaggcggaa taagaaaaac
    11821 tacgatgatg ccgcaaacag catttttgct gaaaaccaag atgcgcaaga taagaaaagc
    11881 gaaaaccgtt aatattgtga taacggagca aaacaatgaa cgcaacatcc caatttacca
    11941 gtaatttctg gaatatatat attgcagtta ttgtcttact gagctttatc gctttggctt
    12001 ggctgctgct gtctcaaaat gttgtcaaac gtccgaagaa gggcgaagaa gtacaaacta
    12061 cgggtcatga gtgggacggc attgccgaat acgacaatcc gctgccccgc tggtggtttt
    12121 ggctgtgtgt tttgacgtgg ctgttcggta tcggttatct ggttatgtat ccgggtgtcg
    12181 gcgactacaa aggtctgctg aaatggacca gccataacca atatgaaaaa gaggtcaaaa
    12241 aagccgatga gcaatacggc aaactgtatg ccaagtttgc ggatatgccg attgaaaaag
    12301 tggcaaaaga cccacaggcc aagcaaatcg cccaaaacct gtttaacact tattgtatcc
    12361 agtgccacgg ctctgatgcc aaaggttcta aaggttttcc gaatctgacc gatagcgatt
    12421 ggttgtgggg cggcgatccc gataaaatcc acgagaccat cgaaaaaggc cgtgttgcga
    12481 ctatgcctgc ctggggtcct gctttgggcg aagaaggcgt gaaagacgtt gcccattatg
    12541 tgatgtccct ttcaaaaccc aaaggtcagt atgatgagga acgtgccgcg cgcggacaag
    12601 ccttgttcag cggtccgcct gccaactgtt tcacttgcca cggcgataag ggacaaggta
    12661 tccaaggttt gggtccgaac ctgactgatg acgtgtggtt gtggggcggt acgcaaaaat
    12721 ccattatcga aaccattacc aacggtcgca gcagccaaat gcccgcttgg ggacatttct
    12781 tagataaaga caaactgcat atcatgactg cttatgtatg gggtctttcc aataaagacg
    12841 gtaaagctcc ggtgaaaaaa gccgagcctg caccggcggc agaacccgca ccatctgctc
    12901 ctgcagaagc agcacaagcc gcttctgaag ccaaacctgc cgtagcagaa cctaaagccg
    12961 aggaaaaagc cgcacctgcc gccaaagcgg atggcaaaca ggtttatgaa accgtttgtg
    13021 ccgcctgcca tggcaatgca attccaggta ttccccatgt aggcaccaaa gccgactggg
    13081 ccgaccgcat caaaaaaggt aaggacacgt tgcacaaaca cgcgatcgaa ggtttcaata
    13141 cgatgcccgc aaaaggcggt cgcggcgatt tgagcgatga tgaggtcaaa gctgcggttg
    13201 actatatggt caaccagtca ggcggtaagt tctaaccgtt gttttccgac tttgtcggat
    13261 gcagaaatcc ggattcatat cgaatccgga ttttttattt tgaacggaaa tcctgttttt
    13321 gatttatgcc gtctgaaagt ggggattttg atgcttaagc agtcagaccg actgatattt
    13381 ttgtatggtt taaagaatgg tgcagttggg tgtcggacag cattgtttga tgctttcaga
    13441 cggcatatag gtttgtttct tcaaaattga atcttttttc atatgttgca aaaaaaattg
    13501 attttagtca taaagaatta gtctttattg tttataatcg cgcatcatca cgatagcctt
    13561 aatttcaaaa ggacgattaa tggatacaca aatcaaaact gaagccggtc agcagaataa
    13621 ccggcattat ctgagcgttt ggaggtggca tttttatgcc ggtttattgg ttatgccctt
    13681 cttgaccctg cttgccgtta caggtttggg tatgctgttg tttgccaata ttaccggtaa
    13741 agagggagag cgtattcacg ttttccctca ggcagtggtg caacccctct ctgttcaggc
    13801 agaagcggca cgcggtgcca ttaatccgga gacttcgtcc gtcgtccaat atattgcacc
    13861 gcgtgccgat gatatggttg ctgtgttccg tgtcaacaat gagggtaagg caaccatggt
    13921 tgcggtcgat ccttatacgg caaaagtggt caacaccatg ccgcgcaatc agggttggta
    13981 tcacactatg gatgaaatcc acggcgatat gatgctcggt gcggcaggcg attatctttt
    14041 ggaaacggca gcttcactga ccattattat ggttgtcagc ggcttgtacc tttggtgggc
    14101 gaaacagcgc ggcattaaag cgatgctgct gccgccaaaa ggcagggcgc gttcttggtg
    14161 gcggaatctg cacggcgcgt ttggaacttg ggtgtcgttg attttactgt tgttctgcct
    14221 gtcgggtatt gcttgggcag gtatttgggg cggcaagttc gtgcaggctt ggagtcagtt
    14281 cccggccggc aaatggggtg tcgaaccgaa ccccgtttca gtcgtgccga cccacggcga
    14341 ggtattgaat ggcggcaagg ttaaggaagt gccgtggatt ttggagctta cgcctatgcc
    14401 tgtttcaggg acgactgtgg gcaaagacgg cattaacccc gacgagccga tgacattgga
    14461 aaccgtcgac cgttttgcgc gggaaatcgg tttcaaaggg cgttatcagt tgaatttgcc
    14521 caaaggcgag gacggggtat ggactttgtc gcaggattct atgagttatg acatgatcag
    14581 cccgtttgcc gaccgcacgg tacatatcga ccagtacagc ggcaagattc ttgccgacat
    14641 ccgttttgac gattacaacc cgttcggcaa atttatggcg gcaagcattg cgctgcatat
    14701 ggggactttg ggctggtgga gcgtgttggc gaacgtcgtg ttctgccttg ccgtgatttt
    14761 tatcggcatc agcggctgcg tgatgtggtg gaaacgccgt ccgtccggcg tggcgggcat
    14821 tgttcctccg gcgcaaaaaa tcaaactgcc cgtctggtgg gcgatggcat tgccgctgct
    14881 gttgattgca ctgcttttcc cgaccgcgct gcttgccatt gccgtgattt ggctgttgga
    14941 taccttgctg ctgtcgcgga ttcctgtgtt gaggaaatgg tttaaatgac ccgatgccgt
    15001 ctgaagcgtt cagacggcat tttgtttgcg ggcggcttgc ccgagaagct atataattcc
    15061 gcatcactgt cattttgaaa aagcaagcca tgttttacct gtaccaatcc aaccgcctcg
    15121 aatcgctcgc tgcactgttt gcccgcattc aaaaagtcaa accgctgaaa tgtgccttgc
    15181 agcccgaaca gattgttgtg cagagccagg ggatgcgccg ctacctcaac acctgcctcg
    15241 cccgcgattt gggcgtggcg gcgaatttgg cgttcagcct gcccgccggc ctgacgtgga
    15301 agttgatgaa aaaactgatt cccggtattc cggaactcag cccgtttgca cccgaagtca
    15361 tgcgctggcg gctgctggat ttgttccgca gcgcagaatt tcaaaacgga gcggaatttg
    15421 aagatgtgag gaatgtgctg caagactatc tgggcagcgg agaatcggcg gattaccagc
    15481 ttgcgggaca gcttgcagac atattcgacc aatacctcgt gtaccgtcct cagtggatag
    15541 acgcttggca gcagggcagg atactcggtt tgggcgacga cgaaatctgg cagtccaaac
    15601 tgtggcgtta cctcgacgac ggcaggcaga gcgcgccgca ccgtgtcgcg ttgtgggaaa
    15661 aactgcttgc cgcgttggac aaggataagc tgcccgagcg ttatttcgtg ttcggcattt
    15721 ccacgatggc gccgatgtat ttgcagcttt tgcacaagct gtccgaacat tgcgacgtgt
    15781 tcgtgttcgc actcaatccg agcgggatgc attggggcaa cgtcatcgaa gcggcgcaaa
    15841 tcctcaaagg cggcggcgat cccgatctga cgcaggcagg gcatccgctg cttgcctcat
    15901 tgggcaagca ggggcgcgac tttttcgact ttttgaacga aatggaaata gaagaagaaa
    15961 cgccggtatt tgaagaaggc gggcgcgata cgcttttgca cgccctgcaa accgatattc
    16021 aaaacctgaa aatgccgtct gaaacggtgg gaagcgtcaa cacgggcgac ggctcgatac
    16081 gcatcgtctc cgcacacagc cctttgcgcg aattgcagat actcaaagac aaactgttga
    16141 aaattctgca tgaacatccc gattggcagc cgcacgacat cgccgtatta accccgaaca
    16201 tcgaacccta tacgcctttt atcgaagccg tgttcggaca ggcgcagccc ggcgcgcagg
    16261 cattgccgta ttccgtttcg gacgtgaaaa ttagccgccg gcaaccgttt ttttatgcgt
    16321 tggagtgcgt gtctgacttg ctggaaagcc gttttgaagt cggcaaagtg ctcgcgcttt
    16381 tggaaaccgc gcccgtgttg cgccgtttcg gactgaccgg ggacgattta ccgcttttgc
    16441 acgacatggt tgccgatttg aacgtccgct ggggtttgga cggagaaatg cgcggcggca
    16501 cggatcagct gtttacctgg aagcaggcgg cagaacgcat gatattgggc tggatgctgc
    16561 ccgaaggcgg caacccgatg tggcaggatg tcagcgcgtg gtatgccgac gtgaatcaaa
    16621 ccgccatgtt cggacgtttt gccgccttcc tcgaaaccct gtcggatatt gcccggatat
    16681 ggcggcaacc tgcgacggtc ggcgaatggg tggcgcgttg ccgggatttg cttgaaacat
    16741 tgtttcaagc cgggcccgat gaccaaaagg cagtccaaaa cctcgaaaac gaatgggtca
    16801 aatggcagga agagagcact ttggctgggt ttttcggaca gttgccgcaa caaaccgtca
    16861 tccgccatat ccgacgtttc ctcgacagcg aaagcgaggc aggcttttta cgcggcggca
    16921 tcaccttttg cagtatggtg ccgatgcgga gcctgccgtt caaagtcatc tgcctgttgg
    16981 gtttgaacga cggagatttt ccccgcaata ccaaagccgc cgtattcgac ctggttgcca
    17041 aacatcccgc caaaggcgac cgcgcccgcc gcgacgacga ccgctacctg ttcctcgaag
    17101 ccctcatcag cgcgcgcgaa atcctgtatt tgtcctacat cgggcgcgac atccgcaaag
    17161 acgaagaact ggctccgtct tctttgttgg gcgaactcat cgataccgtt gccgctatgg
    17221 cgggcattgg tagccgccaa cttgcacaaa attggataga acagcatccg ctgcaagcct
    17281 tctcgcgccg atatttccaa gaaggcggac gttcagacgg catattcggc acgcgtaccg
    17341 actacgccgc cgcgctcgga caaacgcccg aaccgccgcg cccttttttc gaccaacccg
    17401 tagaaaacgc cgaacccgtt gccgaaatcg gacaggacga atttatccgc ttctggcgca
    17461 accccgtcaa agtatggctt cagcagcagc ttgcgtggag cgaaccccat atcggcgaag
    17521 cctgggaacc tgccgaaccc ttcgatccgc aacacgcgga gcaaatcgcc gaaacctata
    17581 tcggggcgcg ccgcgaagga caagattttt cccaaaccgc cgcccgtatc gcggcggaaa
    17641 gcctcctgcc gtcgggagag ttgggcagac tttggcagca ggacttccaa accgccgcca
    17701 aacaaatcga cacgtcggtt ttaaacagcc caaaacttcc tccgttccca tacgccatac
    17761 cgtcggacgg gcaaatcctg aaaggcagct tgggcaatct gtaccgctgc ggtcaggtgt
    17821 tttacgccta cggcaaaccc aatgcgccgc aacgtgtggc ttttttgttg gaacacctga
    17881 tattttgcgc cgttatgccg tctgaagccg aaacgcggca aacctttatc gtccaatccg
    17941 gagaaacaga agtattggcg gaaatcgcgc aagacagggc attgcagctg ttgtcggaat
    18001 ggatggcgtt tttcaatatc gggcaaaacc gcccgctgcc gttttttgcc aaaacctcgc
    18061 ttgccgccgc cgaagcgttt gcccaaaaac aagattggga agccgccctg aaaaaagccc
    18121 gaaccgccta ttacggcagc aaagtcagca aagggcagaa agactatacc gaagtcgccc
    18181 tcgtgttcgg caacgcaagc caaaacccgc tcgaacagcc cctgtttgaa aacctcgccc
    18241 gcctgctcgc cgacacgctt gccgcagcgg aaaagaggga agggaccgga gcagcataac
    18301 aggatagaaa gacaaatgcc gtctgaaagc gtttaagcat ttcagacggt attttgttta
    18361 tcgtgtttaa ggtgcgggat acaaagtggg cgcgccgggg ccgacgggca ggcccaaaac
    18421 aaatacccaa atgcagaata aggcgatcca tgcaatcaaa aagaaggcgg aatacggcaa
    18481 catcatagaa atcagagtac ccacgcccgc atcttttttg tatttcatca ccgtcgccat
    18541 aatcagcccg aaataactca tcatcggcgt aataatattg gtaacggaat caccgatgcg
    18601 gtaagcggct tgaatgactt cgggcgcgta accggccaac atcagcatag ggacaaaaat
    18661 cggtgcggtt accgcccatt gcgcggaagc ggagcctatc atcagattga taaaagcaca
    18721 aattaaaata aaaccgataa acaacacgct gccggccaag ccgacttctt ttaagaacac
    18781 cgccccttta acggcaatat attgcccaat attcgtccaa ttaaaaaatg cgacaaactg
    18841 tgcggcaaaa aagatgatga ccaaataaag ccccagagta ctcatcgatt cggccatcgc
    18901 attaacgact tcccgttcgc cgcgcaaact tcgggttatc cggccataaa caatgcccgg
    18961 cagcgcaaac aacaagaaaa taaaaacaac aatcgatttt aaaaacggcg aaccggcaac
    19021 caatcctgtt tcaggatgac gcaaaatacc gtcggcaggg acgatgctcc aagccaatag
    19081 ggcggataaa gcaacaaaca ccacgcctgc ccaaattaat cctttatatt ccaaaggcgt
    19141 gatttcattg gaatgccgga tgtctttttc ttcttgtgac aaatctgact gataagggcc
    19201 caattgcggt tcgacgattt tttcagtaac aaaataacca atcaaagcaa tcacaaacgt
    19261 actggttacc ataaaaaacc agttggcttc agggcctacg acgtagtcgg gatggatgat
    19321 ttgcgccgcc tgttgggtaa tgcctgccaa gagcggatcg agtgtgccta agaacagatt
    19381 ggccgaataa ccgccggaaa cgccggcgaa agccgcagcc agaccggcga gaggatggcg
    19441 gccgagcgaa tgaaagatga cggcggacaa agggattagg acgacatagc ccaattcaga
    19501 agccgtattg gataaaatcc ctgtaaaaac aaccataaaa gtagtgagtt tgcgtgggga
    19561 ttttgtgagc aataagcgca ttaatgcgga aatcaagccc gatttttccg caatccccac
    19621 gcccaataaa gaaaccaaca ccgttcccaa cggcgcgaaa ccggtgaaat ttttaacggt
    19681 atgcgtcagg attttgatca aaccgtcggc atcgagcagg ctgacaacgt gaatcaaacc
    19741 gtcatcggca cgtcctttcg ccccaacagg acgcggatcg gggacggata gtccgaaata
    19801 cgcaccgacg gcagaggcaa tcagcaataa cacaatgaaa ataataaaaa gcgtaaccgg
    19861 gtgcggcaac atattgccca gccattcgac tgtgcgtaaa aatcgtccgc tacgacgcgc
    19921 gtcggtttga ctcatctgct tctccttaaa aaaatatatt gagtgcatta aatttttgaa
    19981 tttaacatga agtgttttgt aagcaaacta aaataatcgt atatgtatat aaccgtaata
    20041 gattaaaacg gaaaatgccc acatcgttat tttcataaag gcgggaatcc gaaaacttga
    20101 cgttaaagcc ttatcaggaa tgactggaac tcaaaaaaac gaattcccgc ctgcgcggga
    20161 atgacgggat tttcggtttt tgtttgcaa
//
LOCUS       DAXGCP010000033        19985 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.033, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000033 DAXGCP010000000
VERSION     DAXGCP010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19985
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.033"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(150..542)
                     /gene="rpsI"
                     /locus_tag="ACFJCW_001022"
     CDS             complement(150..542)
                     /gene="rpsI"
                     /locus_tag="ACFJCW_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HFC4151194.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLTKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESLDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            complement(555..986)
                     /gene="rplM"
                     /locus_tag="ACFJCW_001023"
     CDS             complement(555..986)
                     /gene="rplM"
                     /locus_tag="ACFJCW_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HFC4151195.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVATEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQDQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            complement(1164..1343)
                     /gene="ssrS"
                     /locus_tag="ACFJCW_001024"
     ncRNA           complement(1164..1343)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACFJCW_001024"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(1349..1654)
                     /locus_tag="ACFJCW_001025"
     CDS             complement(1349..1654)
                     /locus_tag="ACFJCW_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HFC4151196.1"
                     /translation="MNIEQVYIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKITDMDNACQKALSRLGQE"
     gene            complement(1665..1994)
                     /locus_tag="ACFJCW_001026"
     CDS             complement(1665..1994)
                     /locus_tag="ACFJCW_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151197.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELERAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENARYRALLEQSREKISALAARLP
                     QRQETQQ"
     gene            complement(2048..3037)
                     /locus_tag="ACFJCW_001027"
     CDS             complement(2048..3037)
                     /locus_tag="ACFJCW_001027"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HFC4151198.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLAEALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGSVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            complement(3160..5862)
                     /gene="ppc"
                     /locus_tag="ACFJCW_001028"
     CDS             complement(3160..5862)
                     /gene="ppc"
                     /locus_tag="ACFJCW_001028"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HFC4151199.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDERQTYDLTFACGLFAQILNIAEDVHHERRRQIHEDAGHNA
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLNFNRRIRALL
                     PQRERCTNADALARLRREIDTVLLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRKMEHDFQTAYPDVRVPNILKIGGWIGGDRDGNPFVSGETLRFAFRRHADAVFR
                     FYRSELDKLYRELPLSIRRVKVNDDVMALAALSPDEEIARTEEPYRRAIAYIMARAMG
                     KARSLGLGMGCKFGFLEPYASAQKFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELGHQRPLYSP
                     FITYSDHTRRELAIFNEARKIKDEFGEDAVTQSIISNCEQPGDLLALALLLKESGLLA
                     VENGKPHSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLHQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEGSPETLAALRGHAQNNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAKVIFGMIKEEYRRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            5905..6798
                     /locus_tag="ACFJCW_001029"
     CDS             5905..6798
                     /locus_tag="ACFJCW_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HFC4151200.1"
                     /translation="MPHPCQTVHTLTTHVPKCRLKLNAARRRRYNRPQLFFPNIIMTA
                     TEHDNDDALLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGVGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAETLAGRLKRINHTVDVRAVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRACVQTKTPLVSGAAVRFEGQLAAYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVLSPLVGIVGCTQAAEALKILLEAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPVCGAAR"
     gene            complement(7198..7422)
                     /locus_tag="ACFJCW_001030"
     CDS             complement(7198..7422)
                     /locus_tag="ACFJCW_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HFC4151201.1"
                     /translation="MDAVQELERRIVELEIQTALQEDVISGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(7423..8811)
                     /locus_tag="ACFJCW_001031"
     CDS             complement(7423..8811)
                     /locus_tag="ACFJCW_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HFC4151202.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLADAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNVIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLAFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLVAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCTGL
                     GFSPLATAAIVGTAGALGDAGSPASDSTLGPTMGLNADGRHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            complement(8897..9718)
                     /gene="prmC"
                     /locus_tag="ACFJCW_001032"
     CDS             complement(8897..9718)
                     /gene="prmC"
                     /locus_tag="ACFJCW_001032"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC4151203.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEI
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPNVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSERQWDIIVSNPPYIENGDKHLSQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVEILPDLAGLDRVTLGKYMKHLK"
     gene            complement(10134..10988)
                     /locus_tag="ACFJCW_001033"
     CDS             complement(10134..10988)
                     /locus_tag="ACFJCW_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4151204.1"
                     /translation="MKLNAKLKALLASAAIAVGLTACGGGSGDAQSSQSSGAATVAAI
                     KEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSPDKVEFVLTEAANR
                     VEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKNKPITDMAQLKDQTL
                     LVNKGTAADAFFTKSHPEVKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPN
                     FEVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVYGEKV
                     KPEALLAE"
     gene            complement(11101..11832)
                     /locus_tag="ACFJCW_001034"
     CDS             complement(11101..11832)
                     /locus_tag="ACFJCW_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HFC4151205.1"
                     /translation="MALLSIRKLHKQYGGVTAIQSLDLDLEKGEVIVLLGPSGCGKST
                     LLRCVNGLEPHQGGSIVMDGVGEFGKDVSWQTARQKVGMVFQSYELFAHMTVIENILL
                     GPVKVQNRDRAEAEAQAGKLLERVGLLDRKNAYPRELSGGQKQRIAIVRALCLNPEVI
                     LLDEITAALDPEMVREVLEVVLELAREGMSMLIVTHEMGFARKVADRIVFMDKGGIVE
                     SSDPETFFSAPKSERARQFLAGMDY"
     gene            complement(11834..12502)
                     /locus_tag="ACFJCW_001035"
     CDS             complement(11834..12502)
                     /locus_tag="ACFJCW_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC4151206.1"
                     /translation="MAFEWLFEGKNAARLGEGLLLTAQISLISVAASCVLGTLFGLVL
                     RSRNRLVRFVGRFYLETIRIVPILVWLFGLYFGLSVWTGIHIGGFWVCVWVFSLWGVA
                     EMGDLVRGALESIEKHQVESGLAPGLSRGQVFRCIELPQSIRRVLPGAVNLFTRMIKT
                     SSLAWLIGVIEVVKVGQQIIENSLLTQPNASFWVYGLIFMLYFFCCWPLSLLAAKLEQ
                     KWEH"
     gene            complement(12492..13151)
                     /locus_tag="ACFJCW_001036"
     CDS             complement(12492..13151)
                     /locus_tag="ACFJCW_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HFC4151207.1"
                     /translation="MNWPYLIDAVPKFADAAKLTLELSVYGVVLSLLFGLPVAVVTAY
                     RIRPFYALARAYIELSRNTPLLIQLFFLYYGLPKMGIKWDGFTCGVIALVFLGASYMA
                     EAVRAGILAVPKGQVGAGKAIGLSRFQVFRYVELPQVWAVAVPAIGANILFLMKETSV
                     VSTVGIAELLFVTKDVIGMDYKTNEALFLLFAAYLIILLPVSLLARRIENRVRSAKYG
                     V"
     gene            complement(13295..14779)
                     /gene="tldD"
                     /locus_tag="ACFJCW_001037"
     CDS             complement(13295..14779)
                     /gene="tldD"
                     /locus_tag="ACFJCW_001037"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HFC4151208.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQIDQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRLNVTVIAKQGERREQGGA
                     GGGGRYDLAYFDETLVRQFVDAAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLTGTQSTGNGRRQSYASVPMPRMTNTFMENGSYEPEEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFGASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     regulatory      14854..14958
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            15024..16250
                     /gene="cytX"
                     /locus_tag="ACFJCW_001038"
     CDS             15024..16250
                     /gene="cytX"
                     /locus_tag="ACFJCW_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HFC4151209.1"
                     /translation="MSGNASSPSSSAAIGLVWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKCGSVLFSVANMLQLAGWTAVM
                     IYVGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARRTGGLKTVSMLLMLLAV
                     LWLSVEVFASSGTNAAPAVSDGMTFGTAVKLSAVMPLSWLPLAADYTRQARRPFAATL
                     TATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGITGILAVVLSTVTTTFLDT
                     YSAGASANNISARFAEIPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLI
                     ADFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVS
                     VRLFFKKTQSLQRNPS"
     gene            16247..17347
                     /locus_tag="ACFJCW_001039"
     CDS             16247..17347
                     /locus_tag="ACFJCW_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HFC4151210.1"
                     /translation="MTRIAVLGGGLSGRLTALQLAEQGYQIELFDKGTRQGEHAAAYV
                     AAAMLAPAAEAVEATPEVIRLGRQSIPLWRGIRCRLNTHTMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADEIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECAPQDLQAQYDWVIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIAAGLRPTLNHHNPEIRYSRERRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIGRQD"
     gene            17369..17986
                     /gene="thiE"
                     /locus_tag="ACFJCW_001040"
     CDS             17369..17986
                     /gene="thiE"
                     /locus_tag="ACFJCW_001040"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HFC4151211.1"
                     /translation="MTFPPLKSLLKFYAVVPTADWVGRMVKAGADTVQLRCKTLHGNE
                     LKREIARCVAACQGSRTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPGYIASGAIFQTTTKQMPTAPQGLDKLREYVEQARGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
     gene            18408..18602
                     /gene="thiS"
                     /locus_tag="ACFJCW_001041"
     CDS             18408..18602
                     /gene="thiS"
                     /locus_tag="ACFJCW_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HFC4151212.1"
                     /translation="MNIILNGGPAELHGTSVADLIAQTAPQKPFAVAVNTVFIPKGAY
                     TETVLHENDKIDIVRPVVGG"
     gene            18681..19469
                     /locus_tag="ACFJCW_001042"
     CDS             18681..19469
                     /locus_tag="ACFJCW_001042"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HFC4151213.1"
                     /translation="MLTLYGETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     TGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALKILRERLPDTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARTKAQASTPTVGQPFWHSAEY"
     gene            19484..19696
                     /locus_tag="ACFJCW_001043"
     CDS             19484..19696
                     /locus_tag="ACFJCW_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol phosphate phosphatase"
                     /protein_id="HFC4151214.1"
                     /translation="MPSEGFRRHRGPKRANRHSPASRLCREEQGNRPENLAARPDTAT
                     NETPGLPGAQAAAQALSTAIEGSFVV"
     gene            complement(19777..>19985)
                     /locus_tag="ACFJCW_001044"
     CDS             complement(19777..>19985)
                     /locus_tag="ACFJCW_001044"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151215.1"
                     /translation="MRIFCNAMKNKQINLSADVCDLGRQTFIAPDKSGSAGMDGGFVP
                     VGKKPAVFEQPSDLVRTGLPFGGV"
BASE COUNT         4222 a         5654 c         5631 g         4478 t
ORIGIN      
        1 gccatccctg acggtcagtt cgtccgtgta gtcgatactg gtgctgtttt tgatttttgc
       61 ccaatccgta atctttagat taccaatggg aaaccgcctg ttacaaataa aaaaccctgc
      121 gataagcagg gttttttgaa tttccaaaat caacgtttgg agaattgttt tgcacggcgt
      181 gctttgcgca gacccggttt tttacgttcg acttcgcgcg catcgcgggt aacgaaaccg
      241 gcttgagaca aggcaggttt caaagcagcg tcaaaatcaa tcagggcacg ggtaataccg
      301 tggcggattg cgccggactg gccggtttcg ccgccgccga caacatttac tttgatgtcg
      361 agagattcgg cgttttcagt cagaaccaga ggttggcgga caaccatacg gctggtttcg
      421 cgtgcgaaga attcgtcaac gggacggccg tttacgatga tttgacccgt acctttagtc
      481 aggaatacac gagccactga acttttgcgg cggcctgtgc cgtagtagta tttaccgttc
      541 atgtcgtgtc cttattattt cagttccaaa actttgggtt gttgcgcagc atgggcatgc
      601 tccgcaccag cgtacacttt cagtttttta atcatggcgt aacccagcgg acctttgggc
      661 agcatacctt ttacagcctg ctccaaagcg cggcccggga attgatcttg catttcgcgg
      721 aaagtgcgct cgtagatgcc gcctggaaaa ccggaatggc ggaagtattt tttatcttcg
      781 aatttggcac cggttacacg cagtttgtcc gcattgatga cgatgatgta atcgccggta
      841 tcgacgtggg gggtgtattc aggtttgtgt ttgccacgca gacggctggc gacttcggtt
      901 gcaacgcgac ccaagacttt gtcttgggca tcgatgacga accattcgcg cttcacctcg
      961 tggggtttcg ctgaaaaggt tttcatagtg gaaatccaga tagatataga aagttatgga
     1021 ttttaaagac aggatttgat tttgtcaatc gcattaccgc gttacggaag gattttccgg
     1081 atttcggcag actgcatact gctttttcgg gcggggcggc ggccaatgtg aaaaaccgca
     1141 tcgttgcgat gcggttttga atgggaatcc ccgcgagagc cgtttcggcc gaatccgctt
     1201 gaaccttgct gacaaggcgg ctgccccggg tagtttcggg tgcgtccgca aaaggacgct
     1261 cgcgcccact actgctcccg gcaaccttaa gcgaacttat tggttcaaag gaatatatgc
     1321 cttcgcggac accgcaggga aaaaggggtt attcctgccc caagcgggat agtgcctttt
     1381 ggcaggcgtt gtccatatcg gttattttac gcgcaaaatc gccgattgcc aaatcgccgc
     1441 cgttcaggga ggttttcaat aggtcgtgga cgacgttgag cgcggccata atgacgattt
     1501 tttcgctgtc cgcgacgcgg ccgccttcgc ggatggcttc ggctttgccg ttgagcattc
     1561 cgactgcctg caacagtgtg tctttttctt ctgccggcgt gttgacggtc agccgggcgt
     1621 gcatgacttc gatgtagact tgttcgatgt tcatccttta atccttattg ctgcgtttcc
     1681 tgccgttggg ggaggcgcgc tgccagtgcg ctgattttct ccctgctctg ttcgagcagg
     1741 gcgcggtatc gtgcattttc ttccgtcagg ctgtcgattt tgttttgcag gtcttctttg
     1801 agtttgccga cttggacgag cagggcttcg ctgagttcgt cgacggcggt ctcgtgttcg
     1861 agtttttgcc gctcgtgcgc ccgttcgagt tcggcgacgg tttctttgag gcggcggttt
     1921 tcgctgacga gggtttcgaa tttttgtacc aacgtataaa cgctgctttc gagtttttcg
     1981 atattttgtt tcatgacctt acctgtctgt atgccgtctg ggggttcaga cggcatctgt
     2041 ttgttgttta ttcgaaacgc gcgctgcgtt ccatcagcct ttcgacgacc tgctgagggg
     2101 tcatttcttt gcggatgagt tgcagcaggg tttgggtaat cggcatatcg atttggtatt
     2161 tgcaggcggt attgaagact tcttctatgg tgctgacccc ttcggaaacg tgcccgattt
     2221 cgaccagcac ctgatgcagt tccttgcctt ctgccaaacc caagccgacg cggcggttgc
     2281 gcgaaagtgc accggtacag gtcaagatga gatcgccgat gccggcaagc cccatcatgg
     2341 ttttgggctg cgcgcccatt gcggaggcaa ggcgggtgat ttcggccagt ccgcgcgtaa
     2401 ccagtgcggc acgggcgttg agtccgtatt cgagtccgtc ggagagtccg gtagcgattg
     2461 ccatgacgtt tttgactgaa ccgcctactg ccacgccgat aacgtcggta ctgccgtaaa
     2521 gcctcatgac ggtcgtgttg agctgcggta cgagttcttc aatccactct tggttttcgg
     2581 aggcgaggac gacggcgcag ggcagttgtt tggcgagttc ctgtgcaaaa ctcggaccgg
     2641 aaagtacgcc gattttctta ttgtcgggca atacttcttt caagacttgg aaggtcagca
     2701 gccctgtatc ctgctcgaag cctttgcagg cggcgaggac ggggaggtgt cccgcgccgt
     2761 actgtttgag cagctctgcg ctgcttctca atccggcaac ggaggttacg ataaggacaa
     2821 gtccgctgtc tttgagcgcc tctgccaaat ccgcacacac ttccaaggtt tcgggaaagg
     2881 aaaagccggg cagtccgcgt ttgttttcac gcgcttcctg catttggcgg acttggtctg
     2941 cgttgcgcgt ccacagggat acgcggttgc cgtgttggga aaaatgcagg gcgagcgccg
     3001 taccccacga acctgcgccg ataacggtaa ttttcattgg tcgtctttca acatatcact
     3061 gccgttcact ttaaaacaat cggtgtttct ctgcaagtgc ggtcaggtaa atgccgtctg
     3121 aaaggcgttc agacggcatt ttgccccgat gcggcactat cagccggtat tgcgcaaacc
     3181 ttgcgccacg ccgttgatgg tcaggtgcac catcagcagg gcgtgcggat tgtcgggttc
     3241 tttgcgcagg cgtttgagca tggcgacttg caaaccgttg agcgcgttca ggtatggaat
     3301 cctcaaagcg agcgaacggg cgaggctgcg gttgtcgcgc aaaagttctt cggtttgcag
     3361 caggtcgagc agggctttgc ggctgcgtcg gtattcttcc ttaatcatgc cgaagatgac
     3421 ttttgccttt tcgggtgatt cgctcaaacc ggcgtagttt tccgccaagg tgatgtcggt
     3481 tttcgccatc acttgttcca tattggagag catcgcttgg aagaaggggt tgttttgggc
     3541 gtgtccgcgc agggcggcga gggtttcggg gctgccttcg cacaaggttt ccaccgcgct
     3601 gccgaaaccg taccaagccg gcagcatgag gcggttttgc atccaggaga atacccacgg
     3661 aatcgcgcgt aaatcctgaa ttcgcgccag ggttttgcgg ctggcggggc ggctgccgag
     3721 gttgagggtg gcgatttcct gaatcgggct ggtttgcagg aagtagtcga tgaagtcggg
     3781 gtgggtaatc agttcgcggt agtatttgaa cgatacgtcc gacaatgcct gcatcagttt
     3841 ggcatcaggg tcttttttat ccggcaggat gctggcttcc aaagtcgcgg caaccaaggt
     3901 ttccaagttg cgttgggcgt tgccggggtc ggcgtatttg gcggtgatga cttcgccttg
     3961 ctcggtaatg cggatttgtc cggcaacgct gcctgcgggt tgcgccaaga tggcttggta
     4021 agacgggccg ccgccgcgtc cgacgctgcc gcctcgaccg tggaacaagc gcatacggac
     4081 atcgtatttt ttgaagagtt cgaccaagcc caattccgcc tgatgcagac accatgagct
     4141 ggtaacgtag ccgccgtctt tgttggagtc ggaatagccg agcatgattt cttggatgtt
     4201 gccgcggctt tcgagcaggg catcatacca gtcgaggcgg aacatggttt ccatgaccgg
     4261 acaggcattt tcgagcgctt cgatggtttc aaacagaggc acgatgttga tgcggctgtg
     4321 cggtttgccg ttttccaccg ccaacaggcc gctttctttc agcagcaatg ccaaggcgag
     4381 caggtcgccg ggttgttcgc agttggaaat aatgctttgt gttacggcat cttcgccaaa
     4441 ttcgtctttg attttgcgcg cttcgttgaa aatcgccaat tcgcggcggg tatggtcgct
     4501 gtatgtgatg aacgggctgt acagcggacg ttggtggccc aattcgcgca acaaggcggc
     4561 ttgtttttgc tcttcgttca ggctgttgta gtcttccaag cctgcgtgtt ggaaaagctc
     4621 ggcaaccaca tcggcgtgtt tgcctgcgtg ttggcgcagg tcgagcggca tcatgtggaa
     4681 gccgaacacg gacacggaac ggatgaggtc tgccaaacgg ccttcggcaa gcaggcggct
     4741 gccgttgtcg ataagggaac gttgcaattt tttcaaatca tcgagaaatt tttgggccga
     4801 agcataaggc tcgagaaagc cgaatttgca gcccatgccc aaaccgagcg agcgcgcttt
     4861 gcccatagcg cgcgccataa tgtaggcaat ggcgcggcgg taaggttctt cggtgcgagc
     4921 gatttcttcg tcaggcgaga gggctgccag tgccattacg tcgtcgttga ctttgacgcg
     4981 gcggatggaa agcggcagtt cgcggtaaag tttgtcgagt tcgctgcggt aaaaacggaa
     5041 cacggcatcg gcgtggcggc ggaaggcaaa gcgcagggtt tcgccagaaa caaacggatt
     5101 gccgtcgcgg tcgccgccga tccagccgcc gattttaagg atgttcggaa cgcggacatc
     5161 gggataggcc gtctgaaagt cgtgttccat cttgcggtag agtttgggca gggcttcaaa
     5221 aaagctcatc gggaagatgg acacgccgtt gttgatttcg tcgttgacgc tgagtttgtg
     5281 gcggcgcgtt tcgctggtct gccacaagcc cagaagcacg gtgtcgattt cgcggcgcag
     5341 ccgtgccagc gcgtcggcat tggtgcagcg ttcgcgttgc ggcagcagcg cgcggatgcg
     5401 gcggttgaaa ttcaaaacgg tttggcgttg cacttcggtc gggtgcgcgg tcaaaacggc
     5461 ggtaacggac gtattgtcca actgccgctg caccgatttg ccgtcggctt tccccgcttt
     5521 gagcctgcgg acggtttccg tcaggctgcc ttctgctgcg ttgtggccgg catcttcgtg
     5581 gatttggcgg cggcgttcgt ggtgcacgtc ttcggcgata ttcagaatct gggcgaacag
     5641 cccgcaggca aacgtcagat cgtaggtctg ccgttcgtcc aattgcggca atactttttc
     5701 aatcaatgcc gcgctgtcgt cggaagtgga caagagtttg accgtttcga caaccaacgg
     5761 cgaggcttct tcgtgcagga ggttgaacag ggactgtttc aaaaattccg cgtccgccgc
     5821 caaagccgcg tccttcggat tgttcaggat atgcagttgc atgattttcc tctcattgcc
     5881 gtaaatactg taaatgtacc tcaaatgccg catccgtgcc aaaccgttca cactttaacc
     5941 actcatgtcc cgaaatgccg tctgaagttg aacgccgccc gacggcggcg ttacaatcgc
     6001 ccgcaactgt tttttccgaa catcatcatg accgcgaccg aacacgacaa cgacgacgca
     6061 ctcctgctgc ggtacagccg ccacatcctc ttggacgaaa tcggcatcga agggcagcag
     6121 aaactttccg ccgcgcatat tttggtcgtc ggctgcggcg gattgggcgc cgccgccctg
     6181 ccctatctcg ccgcctcggg cgtcggcacg ctgaccatag ccgattccga cacggtcgag
     6241 ctgcacaacc tgcaacgcca agtcgcattt gacgagggcg atgtcggcaa gcctaaagcc
     6301 gaaaccttgg caggccgcct gaaacgcatc aaccatactg tcgatgtccg cgccgtcaac
     6361 gaaaaactcg acggctgccg cctgaccggt ttggttcaaa ccgccgacat cgttttagac
     6421 tgctgcgaca actacgccac gcggcaggcg gtcaaccgtg cctgcgtgca aacgaaaaca
     6481 ccgctggttt caggggcggc ggtacgtttt gaaggacagc ttgccgcata ccgtcccgac
     6541 ttgcccgact cgccgtgtta cgcctgcctg ttcgacggcg gatcggcttc agacggcatc
     6601 tgttccctct tcggcgtgct ctcgccgctg gtcggcatcg tcggctgcac acaggcggcg
     6661 gaggctctga aaatcctgct ggaagcgggc gaaccgtcgc acggcaggct ggcggtttac
     6721 cgtgccttgg aagggggctg gcaatatttc gacctgccgc gcaaccccga atgcccggtt
     6781 tgcggcgcgg cacggtaaaa ccctgccgcc gtttcagacg gcatccgaac ggatgcggcg
     6841 gaacggtttt aaaaatttaa aaatttacat ttctttgcaa aaaaataaac ttaccttata
     6901 attgcagttg ttttagcaat gtctgtttcg cagactcatt gagtaagacg ttttccccgt
     6961 aatgtgtttg gccgtctgtc ccctttgggt tcggacggct ttttttggct gtgtttgaat
     7021 acccggttgg ttttatctgt ttgcagcggg ggaagccgct catcgccgtt cggacaagaa
     7081 ccggtttcat cggataaaag gcattttgtc cgactgatta aggttacatc ttagggttgc
     7141 accggcggaa tattcaaaca cagcctttat ttaaggaaat ccggatacgg cggcgcatca
     7201 ataatgcggc ggaatctcgt cgcgcaggga atacggctct tgcgcgtcgg gattcctgtc
     7261 ctgcattttt tgatacagca gcctcaactg agcctgctgc aaatccaacg tctgccgcaa
     7321 ttccgccacc atcgcgttca gaccggagat tacgtcctcc tgaagcgcgg tttggatttc
     7381 cagttcgaca atacggcgtt ccaactcttg aaccgcgtcc atttacagca ccatcgcggc
     7441 aatccagccg gcaatcagaa gcgggatgtt gtagtggatg aaggtcggga tgacggaatc
     7501 gcggatatgg tcgtgccgcc cgtcggcgtt cagccccatc gtcgggccca gcgtggaatc
     7561 ggacgcgggc gaaccggcat cgcccaacgc ccccgccgtg ccgacaatgg cggcggtggc
     7621 aagcggcgaa aagcccaaac cggtacacag cggcacataa atcgcggcaa taatcggcaa
     7681 agtggaaaag gacgaaccga tgcccatcgt taccaaaagc cccaccacca gcatcgccaa
     7741 cgccgccata cctttgctgt tgccgaatat cgccatactg ctttccacca gcggctgaat
     7801 atgcccggtc gcattcatca cggcggcaaa accctgcgcg gcaatcataa tgaagccgac
     7861 catcgccatc atcttgatgc cttcgccgaa tacgtcgttt gccttgtcgc ggttaatgac
     7921 ccccaacatc ataaatacgg cgaaaccgag catcgcgccc aacaccagcg aatcttcata
     7981 catcaactgt atggcaaagc atacggcgat ggcggcggcg gcaaccaggc tgcggtaggc
     8041 ggacggctgc ggacggtttg ccgcatcggc gttgcccgcc gtatcggcat tgttgctttg
     8101 gtacagtcgc ggtttgcggt agtggacaaa cgccagcagg agtccggcca gcattcccaa
     8161 tgcgggaatc gccattgccg ccatcacgtt gatgtttttc acatcaagct gcggcgcggc
     8221 ggaatggatg ttgcccaaca ggatttcgtt caaaaaaatc gcgccgaagc cgtaaggcag
     8281 gaacatataa gtcgtaacca gcccgaaagt gatgacgcac gcaatcaggc ggcggtcgat
     8341 tttcaggcgg ttaaacacca aaagcagcgg cggaacaatc atcgggataa aggcgatgtg
     8401 gatgggtatg acgttctgac tcataatgcc catcacaagg atgatggaaa gcagcagcca
     8461 tttgaccgcg ccctcgcccg aacgcacgct gtcgggcata ccgccccggt tcagcttgcg
     8521 gacgaccgcg tcggcaagct gctgcggcag gccggaatgg gtaatcgcca tcgcaaacgc
     8581 accaagcatc gcataagaaa gcgcaatctt cgcgccgcct tccaaacctt tgttgaacac
     8641 ggggataatc cccgcctgac tgacctgtcc cgccgcatcg gcaatgtttt gcagcggcat
     8701 acccgccacc gcgccgccga caaacgcgcc gaccgtcagg ctcaatacca cgtgcacgcg
     8761 cgacagcgac agcaccagca taacgattac ggcaactacg actgcattca ttgtttatcg
     8821 ctccaaacct ataaatgttt acatatcgaa acacatcata acccaataac ggaaaatccg
     8881 ccaattttgc aaacaattat ttcaaatgct tcatatactt ccccagcgta accctgtcca
     8941 aaccggccaa atccggcagg atttccactc ccgaaaaacc attctccgcc aacacgccgc
     9001 gcaccgccgc gccctgatcg aaaccgtgtt ccaacaacaa aaaaccgcct tccgccaaac
     9061 ggtcgggcgc gccttgcgcc aaggttcgga tgcagcttag gccgtctgaa aagtcggtca
     9121 gcgcgatttg cggctcaaac cgcaaatcgc cttgcgacaa atgtttatcg ccgttttcga
     9181 tatagggcgg gttggacacg atgatgtccc attgcctttc agacggcata tcggtgtcga
     9241 accacgaacc gtgtgcaaat tcgacccgcg cgcccaaatc cgccgcattt ttccgcgccg
     9301 tttcaagggc gggcgtgctg atgtcggatg cgcgcacaaa cgcatcgggg cgttcgagcg
     9361 caacggttac ggcaactgcg ccgctgcccg tccccaaatc ccacacgcgc ccgttttcgg
     9421 gcaggcgcgc caatacggct tcgaccaagt gttcggtttc ggggcgcgga atcagcacgt
     9481 tcgggttgac tgtaaagcgt ctgccataaa attcgcgcac acctaaaata taggcaaccg
     9541 gctcgccgtt cagacggcgt tgcgccagcc tgtccgcccg ctgtcggatt tcgtccggca
     9601 tttcttcccc gccccgcgtc aacaactgca cgcgcgtata ttccgaaaca tattgcagca
     9661 gcatccttgc ttcaatttta ggcagttttg acaagcccaa ccattcgtca aacgtcattt
     9721 ttcgtcccgt ctgccgccga tgcggcttga acattttttc cggctttgcg gcacgcttgt
     9781 tcaaaaaata tcattttgca ttgaaattat ataataaagg aaaacacctt atcgccgttt
     9841 caataccgta ggaatttatc cgaataacag aaacgctccg ccgtcatccc gcgaaaacgg
     9901 tcatccggaa acataaggct gaagcgtttt atctggaatg acgatttgga agtttcccga
     9961 aattcaaaaa caggcaaaac cggacgaact tgatttccgc acgcgcaaga ataataaaat
    10021 aaataaaacg atgagatagt tgatttttcc tttgaatttg caatattttc ggcggctgaa
    10081 aaaaatccgc acccgccttc aaatgcggat acggattttc ttgtcaaaca aacttattcg
    10141 gccaacaatg cttccggttt gactttctcg ccatacacgg gcaagagggt tttttcatag
    10201 gcggctttca gacggccgtc ttttttcatg gcggcgattt cgccgttgac ccagttcagg
    10261 aggtcggcgt tgcctttttg aacggcgggg gcgataaatt cggcaggacc gagattgccg
    10321 atggcgactt caaagttcgg gttttctttc gcccacgccc acagcagggc gttgtcgtgc
    10381 gcgagtgcta cgccgcgacc gtctttcagc gcgtcgaagg tttcagtgtt ttggtcgaat
    10441 ttcaacagct tgacttcggg atggcttttg gtgaagaaag cgtcggcggc ggtgcctttg
    10501 ttgaccagca gggtttggtc tttcaattgc gccatgtcgg taatcggttt gtttttgggg
    10561 gaaaccacgc ccaacgccac tttcatgtaa ggatcggcga aatcgacggc ttcggcgcgt
    10621 tcgggggttt gggtaaagtt ggcgaggatg aggtcgactt tgccggaacg gacgtattcg
    10681 acgcggtttg cggcctcggt caggacgaat tcgactttgt cggggctgcc gagcaggtct
    10741 ttggccaggt ctttggcgat ttcaacgtca aagccttggt ttttgccgtt tgcgtcaaca
    10801 tagccgaacg ggggtttgtc gccgaatacg ccgatgcgga taacgccttt ttctttgatg
    10861 gcggcaacgg ttgccgcacc gctgctttgt gaagattggg catcgccgga gccgcccccg
    10921 caggcggtca gaccgacggc gatggcggcg gaagccaaaa gggctttgag tttggcgttc
    10981 aatttcattg gaaatctcct ttttgaatgt ttgcttggga tgtttcaaca cacaggacga
    11041 cacataaagc actgccctat gaaatgccgt ctgaaaaggg ttcggacggt ttgcggtaaa
    11101 tcagtagtcc atacctgcca gaaattggcg ggcgcgttcg ctttttggtg cggaaaaaaa
    11161 ggtttcgggg tcggacgatt cgacgatgcc gcctttgtcc ataaagacga tgcggtcggc
    11221 aactttgcgt gcgaacccca tttcgtgggt tacgatgagc atactcatcc cttcgcgggc
    11281 gagttccaaa accacttcca agacttcgcg caccatttcg gggtcaagtg cggcggtgat
    11341 ttcgtccagc aggatgactt ccggattcag gcacagggcg cggacaatgg cgatgcgctg
    11401 tttctgaccg ccggaaagtt cgcgcggata ggcgtttttg cggtctagca gtccgacgcg
    11461 ttccaacagt ttgccggctt gcgcctctgc ttcggcacgg tcgcggtttt gtacctttac
    11521 cgggcctaag aggatgtttt cgatgacggt catgtgggca aacagttcgt agctttgaaa
    11581 gaccataccg actttttgcc gggcggtttg ccaggaaacg tctttgccga attcgccgac
    11641 accgtccatc acgatgctgc cgccttggtg cggctccaaa ccgttgacgc agcgcaggag
    11701 ggtggatttg ccgcagccgg acgggcccag cagtacgatg acttcgcctt tttccaagtc
    11761 caagtctaag gattggatgg cggttacgcc gccgtattgt ttgtgcagct tgcggatgct
    11821 cagtaaagcc atgtcagtgt tcccattttt gttcaagttt tgccgccagt agagatagcg
    11881 gccagcaaca gaagaaatac agcataaaaa tcaggccgta aacccaaaat gaagcattgg
    11941 gctgcgtcag caacgagttt tcaataattt gctgcccgac tttgacgact tcgatcacgc
    12001 cgataagcca ggcgagcgag ctggttttga tcatgcgcgt gaacaggttg accgcgccgg
    12061 gcaatacgcg gcggatgctt tgcggcagct cgatgcagcg gaatacctgc ccccggctca
    12121 agccgggcgc aagacccgat tcgacctggt gtttttcaat cgattccagt gcgccgcgca
    12181 ccaagtcgcc catttcggca acgccccaca gggaaaatac ccagacgcag acccaaaatc
    12241 cgccgatgtg gatgcctgtc cagacggata ggccgaaata caggccgaac agccacacca
    12301 aaatcggcac gattcggatg gtttcgagat aaaaccgtcc gacaaagcgg acaagccggt
    12361 tgcgcgaacg caaaaccaag ccgaacagcg tgcccaatac gcaagaagcc gcaacagaga
    12421 ttaaagaaat ttgtgccgtt aagagcaggc cttcgcccaa ccgtgccgca ttttttcctt
    12481 caaacagcca ttcaaacgcc atatttcgca ctccgtacgc ggttttcaat ccgccgcgcc
    12541 aacaaagaaa caggcagcag gataatcaaa taagcggcaa acagcaggaa caaggcttca
    12601 ttggttttgt agtccatacc gatgacgtct ttggtaacaa ataacaattc cgcaatgccg
    12661 accgtgctga cgacggatgt ttctttcatt aaaaacaata tatttgcgcc gatggcggga
    12721 acggcgaccg cccaaacctg cggcaattcg acatagcgga acacttgaaa gcggctcaaa
    12781 ccgattgcct tgcccgctcc gacctgccct ttggggacgg cgaggatgcc ggcgcggaca
    12841 gcttccgcca tatagcttgc gcccaagaaa accagcgcga ttacgccgca ggtgaaaccg
    12901 tcccatttga tgcccatttt cggcagaccg taatatagga aaaacaattg gatcagcagg
    12961 ggcgtattgc gcgacagctc gatataggcg cgcgccaatg cgtagaaggg gcggatgcgg
    13021 tatgccgtta ccacggcgac gggcaggccg aacagcaacg acaaaacaac gccgtaaacg
    13081 gacaattcca gcgtcagctt tgccgcatcg gcgaatttgg gtacggcatc gattaaataa
    13141 ggccagttca tcagaaatca gcttaacgaa aggcggtatt ttaatgaact tgtaagataa
    13201 tgttaaagaa tgcttaggaa tatcaaacat cggaaaaaag aataaggcga tgccgtctga
    13261 aaacctttca gacggcatcg tgccggattc cgcgtcagat tgcgctgccg ccgacggtca
    13321 gcccggcatc gatacgcagg gtcggctgcc ccacgccgac ggggacgctc tgcccttctt
    13381 tgccgcacac gccgacaccg ctgtcgagcg cggtatcgtt gcctatcatc gaaacgtgtt
    13441 tcagcacttc ggggccgttg ccgataatgg tcgcgccttt gacggggtat tgcagcctgc
    13501 cgccttccac ccaccacgct tcggacgcgc cgaagacaaa tttcccgctg gtgatgtcca
    13561 cctgtccgcc gccgaagttg acggcgtaaa tgcccttgtc gatggacgcg atgatttctt
    13621 ccggctcgta gctgccgttt tccataaagg tgttggtcat acgcggcatc gggacggagg
    13681 cgtagctttg gcggcggccg ttgccggtcg attgcgtacc cgtcaggcgg gcgttggttt
    13741 cgtcctgcat atagccgacc aagatgccgt cttcaatcaa tacggtgcgg cgtgtttcgt
    13801 tgccttcgtc gtcgatgttg agcgaaccgc gccggccggc aatatcgccc tgatcgacga
    13861 cggtaacgcc tttggcggcg acgcgttcgc cgatccggcc ggaaaagacg ctggtcccct
    13921 tgcggttgaa atcgccttcc aaaccgtgtc cgaccgcttc gtgcagcaac acgcccggcc
    13981 aaccgttgcc caaaacgacg gtcatctcgc cggcaggcgc aggacgggat tcgagattgg
    14041 tcagggcttg tttgacggcg gcatcgacaa actgccgcac caaggtttca tcgaaataag
    14101 ccaagtcgta gcgtcctccg ccgcccgcgc cgccctgttc gcggcgttcg ccctgtttgg
    14161 cgatgacggt aacgttcagg cgcaccatcg ggcggatgtc ggcggcgtgt ttgccgtcca
    14221 gacgggcgag gtaaaccata tcgtattcgc aggtcaaacc ggccatcact tgcacgatgc
    14281 gcggatcggc ggctttggcg attgcttcca ctttgttcaa cagcgcgact ttggcggcgg
    14341 aatcgaggcc ggcaatgggg tcggatgcgg aacaaaccgg cttgccgcgc gtttcagacg
    14401 gcattttggc ggacaccttg ccgcctgccg ccccaatcgc gcggacggcg cgggcggaac
    14461 ggtttatcga atcgatgcac aggctgtcgg cgtaggcaaa ggcggttttg tcgcccgaaa
    14521 cggcgcgcac gcccacaccc tgatcgattt ggaagctgcc cgatttgacg atgccctctt
    14581 ccaaatgcca gctttcataa gcggtgcgct ggcagtagat atcggcataa tcgacgtggt
    14641 gcgcgccgat gatgcacagg cttttggcga gcagttcggg ggaaaggcgg ttggcttcga
    14701 gcagccgcgc ctgtacggcg gaataggtcg gatgcatagt gtcggcgcat aaaaaatcag
    14761 gggcttgatt atacggcatt tgttatggaa atgcgccgtg ccgtcgaaaa tgtaagaatt
    14821 ttgccaacgc acgttgcttt gtgtaaactt aaagccttct tgtcggagtg ccgcccgccg
    14881 ggcggctgag attgcgaaag caaaatccgt agaacctgtc ggggtaatgc ctgcgtagga
    14941 aacaaaacct ccccgccctt tcgggcttcc gttccctttt ccgcacttcc ccgaccacct
    15001 tccttctttt taaaggacgt catatgtcgg gcaatgcctc ctctccttca tcttccgccg
    15061 ccatcgggct ggtttggttc ggcgcggcgg tatcgattgc cgaaatcagc acgggtacgc
    15121 tgctcgcccc cttgggctgg cagcgcggtc tggcggccct gcttttgggt catgccgtcg
    15181 gcggcgcgct gttttttgcg gcggcgtata tcggcgcact gaccggacgc agctcgatgg
    15241 aaagtgtgcg cctgtcgttc ggcaaatgcg gttcagtgct gttttccgtg gcgaatatgc
    15301 tgcaactggc cggctggacg gcggtgatga tttacgtcgg cgcaacggtc agctccgctt
    15361 tgggcaaagt gttgtgggac ggcgaatcct ttgtctggtg ggcattggca aacggcgcac
    15421 tgatcgtgct gtggctggtt ttcggcgcac gcagaacggg cgggctgaaa accgtttcga
    15481 tgctgctgat gctgcttgcc gtgttgtggt tgagcgtcga agtgttcgct tcgtccggca
    15541 caaacgccgc gcccgccgtt tcagacggca tgaccttcgg aacggcagtc aaactgtccg
    15601 ccgtcatgcc gctttcctgg ctgccgctgg ccgccgacta cacgcgccaa gcacgccgcc
    15661 cgtttgcggc aaccctgacg gcaacgctcg cctatacgct gacgggctgc tggatgtatg
    15721 ccttgggttt ggcggcggct ctgtttaccg gagaaaccga cgtggcgaaa atcctgttgg
    15781 gcgcgggctt gggcataacg ggcattctgg cagtcgtcct ctccaccgtt accacaacgt
    15841 ttctcgatac ctattccgcc ggcgcgagtg cgaacaacat ttccgcgcgt tttgcggaaa
    15901 tacccgtcgc tgtcggcgtt accctgatcg gcacggtgct tgccgtcatg ctgcccgtta
    15961 ccgaatatga aaacttcctg ctgcttatcg gctcggtatt tgcgccgatg gcggcggttt
    16021 tgattgccga ctttttcgtc ttaaaacggc gtgaggagat tgaaggcttt gactttgccg
    16081 gactggttct gtggctggca ggcttcatcc tctaccgctt cctgctctcg tccggttggg
    16141 aaagcagcat cggtctgacc gcccccgtaa tgtctgccgt tgccattgcc accgtatcgg
    16201 tacgcctttt ctttaaaaaa acccaatctt tacaaaggaa cccgtcatga cccgtatcgc
    16261 cgtcctcgga ggcggccttt ccggaaggct gaccgcattg cagcttgcag aacaaggtta
    16321 tcagattgaa cttttcgaca aaggcacccg ccaaggcgaa cacgccgccg cctatgttgc
    16381 cgccgcgatg ctcgcgcctg cggcggaagc ggtcgaggca acgcccgaag tcatcaggct
    16441 gggcaggcag agcattccgc tttggcgcgg catccgatgc cgtctgaaca cgcacacgat
    16501 gatgcaggaa aacggcagcc tgattgtgtg gcacgggcag gacaagccat tatccagcga
    16561 gttcgtccgc catctcaaac gcggcggcgt agcggatgac gaaatcgtcc gttggcgcgc
    16621 cgatgaaatc gccgaacgcg aaccgcaact cggcggacgt ttttcagacg gcatctacct
    16681 gccgaccgaa ggccagctcg acgggcggca aatattgtct gcacttgccg acgctttgga
    16741 cgaactgaac gtcccttgcc attgggaaca cgaatgcgcc ccccaagacc tgcaagccca
    16801 atacgactgg gtaatcgact gccggggcta cggcgcgaaa accgcgtgga accaatcccc
    16861 cgagcacacc agcaccttgc gcggcatacg cggcgaagtg gcgcgggttt acacgcccga
    16921 aatcacgctc aaccgccccg tgcgcctgct gcacccgcgc tatccgctct acatcgcccc
    16981 gaaagaaaac cacgtcttcg tcatcggcgc gacccaaatc gaaagcgaaa gccaagcccc
    17041 cgccagcgta cgttccgggc tggaactctt atccgcgctc tatgccgtcc accccgcctt
    17101 cggcgaagcc gacatcctcg aaatcgccgc cggcctgcgc cccacgctca accaccacaa
    17161 ccccgaaatc cgctacagcc gcgaacgccg cctcatcgaa atcaacggcc ttttccggca
    17221 cggctttatg atttcccccg ccgtaaccgc cgccgccgtc agattggcag tggcactgtt
    17281 tgacggaaaa gacgcgcccg aacgtgatga agaaagcggt ttggcgtata tcggaagaca
    17341 agattaaagc cgcccgaaag gacaccctat gaccttcccg cccctaaaat ccctacttaa
    17401 attctacgcc gtcgttccca ccgccgattg ggtggggcgc atggtcaaag caggtgccga
    17461 cacggtgcaa ctgcgctgta aaaccttgca cggcaacgaa ttgaaacgcg aaatcgcccg
    17521 ctgcgtcgcc gcctgtcaag gcagccgcac acagcttttc atcaacgacc actggcgcga
    17581 ggcaatcgaa gcgggcgcat acggcgtaca tctcgggcag gaagacatgg acaccgccga
    17641 ccttgccgcc atcgccgccg ccggtttgcg tttgggtttg agtacgcact ccgtcgccga
    17701 actcgaccgc gccctgtccg tacaccccgg ctacatcgcc agcggcgcga ttttccagac
    17761 cacgaccaaa caaatgccca ccgccccgca aggcttggac aaattgcgcg aatatgtgga
    17821 acaggctcgc ggcacgcccg tcgtcgccat cggcggcatc gatttgaaca acgcccgagc
    17881 cgtgctggcc accggcgttt cctcactcgc cgccgtccgc gccgtaaccg aagcggcaaa
    17941 tcccgaagcg gtggttaaag cgtttcaggc tttgtgggat ggataaaacc gaaagaagaa
    18001 aattcaattg ccgtgtaggc aaaacttagc ccgttatcgc aaatatgctt aactttaaat
    18061 gtggcatatc atcaaattcc gtcattcccg ctcaggcggg aatccgccgt aaaacttgag
    18121 aaaccatcat ttgaaaaaca gtttccgaat ttcaaaaatg gattcccgcc tgcgcgggaa
    18181 tgacggcaac cggccggttg cgtatcaaaa aataaagtaa ttcggctaga tatagtggat
    18241 taacaaaaat caggacaagg cggcgaagcc gcaggcagta caaatagtac ggaaccggtt
    18301 cgcccggtgc ttgggcacct tagggaatcg ttccctttga gccggggcgg ggcaacgccg
    18361 taccggtttt tgttaatccg ctataaatac agaaacatcg agaaaccatg aacatcatct
    18421 taaacggcgg acccgccgaa cttcacggca caagcgttgc cgacctcatc gcccaaaccg
    18481 cgccgcaaaa gccctttgcc gtggcggtca acaccgtttt catccccaaa ggcgcgtata
    18541 cggaaaccgt tttacacgaa aacgacaaaa tcgacatcgt ccgccccgtc gtcggcggct
    18601 gaatgccgtc tgaaacccca aaggcacgcc gccggctttc agacggcatc gcgtccgaca
    18661 accataccaa agaatccatc atgctcaccc tgtacggcga aactttccct tcgcggctgc
    18721 tgctcggcac ggccgcctac ccgacccctg aaatcctcaa acaatccgtc cgaaccgccc
    18781 ggcccgcgat gattaccgtc tcgctgcgcc gcacgggatg cggcggcgag gcgcacggtc
    18841 aggggttttg gtcgctgctt caagaaaccg gcgttcccgt cctgccgaac acggcaggct
    18901 gccaaagcgt gcaggaagcg gtaacgacgg cgcaaatggc gcgcgaagtg tttgaaaccg
    18961 attggataaa attggaactc atcggcgacg acgacacctt gcagccggac gtgttccaac
    19021 tcgtcgaagc ggcggaaatc ctgattaaag acggcttcaa agtgctgcct tattgcaccg
    19081 aagacctgat tgcctgccgc cgcctgctcg atgcgggctg tcaggcgttg atgccgtggg
    19141 cggctcccat cggcacgggt ttgggggcgg ttcacgccta tgcgctcaaa atcctgcgcg
    19201 aacgcctgcc cgacacgccg ctgattatcg acgcgggctt gggtttgcct tcccaagcgg
    19261 cacaagtgat ggaatggggt tttgacggcg tactgttaaa caccgccgtt tcccgcagcg
    19321 gcgaccccgt caacatggcg cgcgccttcg cactcgccgt cgaatccgga cggctggcat
    19381 ttgaagccgg gccggtcgaa gcgcgaacca aagcccaagc cagcacgccg acagtcggac
    19441 aaccgttttg gcattcggcg gaatattgaa aaaggcggca aaaatgccgt ctgaaggctt
    19501 cagacggcat cgcggcccca aacgggcaaa ccgccattcc ccggcatcac ggctttgtcg
    19561 tgaggaacag ggaaaccggc cggaaaacct tgccgcccgc cccgacaccg caaccaacga
    19621 aacacccgga ctccccggcg cgcaggctgc tgcgcaagcc ctaagtacgg caatagaagg
    19681 gagttttgtc gtttgaatac atttaaaaat acctcggggc atccgtaagc cttcatccgc
    19741 aacggtttca ccgcttttgc atccccgaat ccgcgctcag acacccccga atggcaaccc
    19801 tgtccgcacc aaatcggacg gttgttcaaa cacggcaggc ttctttccga caggcacgaa
    19861 gcccccgtcc atgcctgccg accccgattt gtccggcgca atgaaagttt gccgacccaa
    19921 atcacaaaca tcggcggaca gattaatttg tttatttttc atcgcattac aaaaaatccg
    19981 cattt
//
LOCUS       DAXGCP010000034        19668 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.034, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000034 DAXGCP010000000
VERSION     DAXGCP010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19668
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.034"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(125..862)
                     /locus_tag="ACFJCW_001045"
     CDS             complement(125..862)
                     /locus_tag="ACFJCW_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HFC4151216.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAICCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPDWKAQESVAIFTKPGCQFCAKVKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(1141..3417)
                     /gene="metE"
                     /locus_tag="ACFJCW_001046"
     CDS             complement(1141..3417)
                     /gene="metE"
                     /locus_tag="ACFJCW_001046"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HFC4151217.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLDVAKDLRE
                     KNWKHQAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLPLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQTLGLKAKPTVVGPL
                     TFLWVGKEKGSVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLNKVSAKILLGTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFAGY
                     DKVLSAGVIDGRNIWRANLNKVLETVGPLQAKLGERLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPVNAGQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFK
                     KGELSASDYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQNLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRATVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLAAFGEF
                     KYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTRKLRAELAK"
     gene            complement(3553..4431)
                     /gene="metF"
                     /locus_tag="ACFJCW_001047"
     CDS             complement(3553..4431)
                     /gene="metF"
                     /locus_tag="ACFJCW_001047"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HFC4151218.1"
                     /translation="MNYAKEINALNNSLSDLKGNINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASHDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPKWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGARP"
     gene            4628..4903
                     /locus_tag="ACFJCW_001048"
     CDS             4628..4903
                     /locus_tag="ACFJCW_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HFC4151219.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAGTHGKTMVWTDGKE
                     YPLFSLDTSSSSHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            4903..5028
                     /gene="ykgO"
                     /locus_tag="ACFJCW_001049"
     CDS             4903..5028
                     /gene="ykgO"
                     /locus_tag="ACFJCW_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HFC4151220.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKSRQR"
     gene            complement(5065..5331)
                     /locus_tag="ACFJCW_001050"
     CDS             complement(5065..5331)
                     /locus_tag="ACFJCW_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151221.1"
                     /translation="MIGRLFRIFFFFALAALIINRLFSRRQKRVLREVAEISAWVLLG
                     AAAATLFWYLFMLYFKHIPDSYRRKMPSETHFSVSDGIFEKGLR"
     gene            5474..6613
                     /locus_tag="ACFJCW_001051"
     CDS             5474..6613
                     /locus_tag="ACFJCW_001051"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HFC4151222.1"
                     /translation="MSQNTSVGIVTPQKIPFEMPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPMVTVKDWVKSQAALADYLGIEQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSAQNIAFNDVARQAILTDPDFNEGHYRSHNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYSVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGNSLTRAVQDVQAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVTAYMNNVDKDCRL"
     gene            6610..7191
                     /gene="metW"
                     /locus_tag="ACFJCW_001052"
     CDS             6610..7191
                     /gene="metW"
                     /locus_tag="ACFJCW_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HFC4151223.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALAEHKKCSGYG
                     IEIDTDNVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RLAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            7308..8105
                     /locus_tag="ACFJCW_001053"
                     /pseudo
     CDS             7308..8105
                     /locus_tag="ACFJCW_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
     gene            complement(8285..8845)
                     /gene="efp"
                     /locus_tag="ACFJCW_001054"
     CDS             complement(8285..8845)
                     /gene="efp"
                     /locus_tag="ACFJCW_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HFC4151224.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVDYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(8888..10039)
                     /gene="earP"
                     /locus_tag="ACFJCW_001055"
     CDS             complement(8888..10039)
                     /gene="earP"
                     /locus_tag="ACFJCW_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HFC4151225.1"
                     /translation="MNTYAFPVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWT
                     DDVSALRALCPDLPDVPFVHQDIHVRTWHSDAADIDTAPVPDAVIETFACDLPENVLN
                     IIRRHKPLWLNWEYLSAEESNERLHLMPSPQEGVQKYFWFMGFSEKSGGLIRERDYRE
                     AVRFDTEALRRRLVLPEKNAPEWLLFGYRGDVWAKWLDMWQQAGSLMTLLLAGAQIID
                     SLKQSGVIPQNALQNDGGVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVR
                     TQLAGKPFFWHIYPQDENVHLDKLHAFWDKAYGFYTPETASVHRLLSDDLNGGEALSA
                     TQRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(10058..10336)
                     /locus_tag="ACFJCW_001056"
     CDS             complement(10058..10336)
                     /locus_tag="ACFJCW_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151226.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKPQHLINGIILACE
                     ATFLFKFVLFETIKHHLKQGFDLKRQTMFLFIPIVLLVVYLFHYFGAF"
     gene            10687..11628
                     /gene="miaA"
                     /locus_tag="ACFJCW_001057"
     CDS             10687..11628
                     /gene="miaA"
                     /locus_tag="ACFJCW_001057"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HFC4151227.1"
                     /translation="MPTPKAFTLLGPTACGKTALALKIAETLPVEIISLDSALLYTGM
                     DIGTAKPSASERAFVPHHLIDIITPVQTYSAARFVEDCTRLTGEITARGKCPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGRPMSAHLNGQPEHTLPFELYTAALIPEDRARLHENIALRFHLMLE
                     QGFIGEVENLRRRYPGLTADSPAIRCVGYRQAWEHLDGATDRQTFIEKGIAATRQLAK
                     RQLTWLRKTPLDCVADPFSDGTSGTRLIEAAKRFFGE"
     gene            11632..12351
                     /gene="tadA"
                     /locus_tag="ACFJCW_001058"
     CDS             11632..12351
                     /gene="tadA"
                     /locus_tag="ACFJCW_001058"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HFC4151228.1"
                     /translation="MLATPPLAPKTVAALHRLGIRTLEELRQNGSVKAFLLLKASGLT
                     LTKSTLWQLESLLNGTPPQEMSQAHKDCLLAELKNHPPVAAFPPQEEMGYFMREALRQ
                     AEQSAADGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            12356..12844
                     /locus_tag="ACFJCW_001059"
     CDS             12356..12844
                     /locus_tag="ACFJCW_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HFC4151229.1"
                     /translation="MTALLVILALALIAVGTAGIVYPALPGLALMFAGTWLLAYAGGY
                     QIYGAGILWTVGLISLGGILADYMAGMLGVKYTGAGKLAVRGALAGSIIGIFFSLPGL
                     ILGPLIGAAAGELISCRNMIQAGKAGLGTLLGLVVGTAFKIGCAVSILLILLVKYIAY
                     LF"
     gene            12910..13662
                     /gene="rlmB"
                     /locus_tag="ACFJCW_001060"
     CDS             12910..13662
                     /gene="rlmB"
                     /locus_tag="ACFJCW_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HFC4151230.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSITELYIQEGKSDARTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVACGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGESDLYHCNLPDSTAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNKKA"
     gene            complement(13724..15099)
                     /locus_tag="ACFJCW_001061"
                     /pseudo
     CDS             complement(13724..15099)
                     /locus_tag="ACFJCW_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
     gene            15479..16354
                     /gene="dapA"
                     /locus_tag="ACFJCW_001062"
     CDS             15479..16354
                     /gene="dapA"
                     /locus_tag="ACFJCW_001062"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HFC4151231.1"
                     /translation="MLQGSLVALITPMNQDGSIHYDQLRQLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHLSVIEETVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGMYRHFKAVAEAAAVPMILYNVPGRTVVSMNNETILRLAEIPNIVGV
                     KEASGNVGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            16363..17559
                     /gene="bamC"
                     /locus_tag="ACFJCW_001063"
     CDS             16363..17559
                     /gene="bamC"
                     /locus_tag="ACFJCW_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HFC4151232.1"
                     /translation="MPSEPFGRHNMTNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSPAEIWPLLKAFWQENGFDIESEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGDKNKDTTMWQPSASDPNLEAAFLTRFMQYLGVDGRQAENALAKKPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTGLALDRIGLTVVGQNTERRAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVADGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(17616..18548)
                     /gene="pip"
                     /locus_tag="ACFJCW_001064"
     CDS             complement(17616..18548)
                     /gene="pip"
                     /locus_tag="ACFJCW_001064"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HFC4151233.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSHPYACAEDNTTWDLVADIEKVREMLGIGKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRSRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEGVDEDAYASL
                     AIARLENHYFVNGGWLQGDKAILNNIGKIRHIPTVIVQGRYDLCTPMQSAWELSKAFP
                     EAELRVVQAGHCAFDPPLADALVQAVEDILPRLL"
     gene            18973..>19668
                     /locus_tag="ACFJCW_001065"
     CDS             18973..>19668
                     /locus_tag="ACFJCW_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4151234.1"
                     /translation="MQPAKNLLFSSLLFSSLLFSSLLFSSAAQAASEGNGRGPYVQAD
                     LAYAYEHITRDYPDAAGANQGKKISTVSDYFKNIRTHSIHPRVSVGYDFGGWRIAADY
                     ARYRKWNNNKYSVNTKKMREKNSNGKNVAEYLKAENQENGTFHAASSLGLSAVYDFDT
                     GSRFKPYIGMRVAYGHVRHQVRSVESETTIVLTTTPGIEAPGVIKKGPIPQPAYHESR
                     SISSLGFGAVAGVG"
BASE COUNT         4975 a         5524 c         4887 g         4282 t
ORIGIN      
        1 agtgcgacaa tatccaaatc ttcttgtaaa tatagagtta ttcggagcgg cagtatagaa
       61 ccgcccgaat aactctatcc ggtatatcag acagtttaat caaactgcct taagcaaaca
      121 gctatcagtt tttagccaag taagcttcca aatcttcgct gccgccgatg tatttgccgc
      181 cgatgaagac ttgaggggca gtcatcttgc cggtaatagc gcgaacggaa gtaacggttg
      241 catctttgcc caatacgatt tcttcgtaag acaaaccttt gtcttgcaaa gcttgtttga
      301 ctttggcaca gaattggcaa cctggtttag tgaaaattgc cacagactct tgagccttcc
      361 aatcgggagc aacgaatttc agcatagtat ctgcatcgga tactttgaaa ggatcgcccg
      421 gttcttcagg ttcgatgaac attttttcaa ccacgccgtc gttaaccagc atggagtaac
      481 gccaagagcg tttgccgaag cccaagtctt ctttaccgac cagcataccc ataccttcgg
      541 taaattcgcc gttgccgtca ggaatcatgt agatgttgtc tgattcttct tcggcagccc
      601 aagcgttcat tacgaaagta tcgtttacag atacgcagca gattgcgtca acgccgtttt
      661 ctttgaacgc gccgaataat tcgttgtaac gcggcaggtg tgaagaagaa caagtcgggg
      721 taaatgcacc gggcagggag aatacgacta cttttttgcc tttgaacaaa tcatcggtag
      781 acacatcttt ccaagtgtcg ccgacgcggg tgcggaatac tacggaaggt actttttgac
      841 cggtacgatc ttgcaaagcc attttgagct ccttaataga ttggtttgag aaataattgt
      901 gaatcgccgc gcattctacc ccatgcaaaa tgatttgtat aatttatagt ttaaataata
      961 taaattattt aaaactatca aatacaactc cgatttgcct gttccccaca tataaagccg
     1021 aattagagaa aaacaagctg caatgaaaag attttccggc aactgctccc ctgcgccgca
     1081 actcaggaca aaatgccgtc tgaaaggctt tcagacggca tttgttcata cggtctcggc
     1141 ttatttcgcc aattcggcac gcagtttgcg ggttacgttc atcattactt gaagctgttc
     1201 cagagtttct ttccagccgc gtgttttcag gccgcagtcc gggttaaccc acagacgctc
     1261 aaccggaaca acctcaatgg ctttgcgcaa caggtgttcc acttcggctt ctgtcggtac
     1321 gcgcgggctg tggatgtcgt aaacgcccgg gccgatgtcg ttcgggtatt tgaattcgcc
     1381 gaacgcagcc aagagttcca tgtcggaacg tgaagtctca atggtgatca cgtccgcatc
     1441 cattgcagca atcgcaggca ggatgtcgtt gaactcagag tagcacatat gagtgtggat
     1501 ttgagtgctg tcttcgcaac ctgcagagga tagacggaag gattcgcccg cccagttcag
     1561 gtaggcatcc caatcggcac gtttcaaagg aagaccttcg cggatggcag gttcgtcaat
     1621 ttggatgact ttaatgccgg ctttttccag atccaatact tcgtcgttca gagccagtgc
     1681 gatttgtttg cacacggtag cgcgcggaat atcgttgcgg acgaaagacc attgcagaat
     1741 ggttacagga ccggtcaaca tacctttcat cgggcgtttg gtcaggtttt gtgcgtaagt
     1801 agaccaagcg acagtcatag cttcaggacg gcttacgtca ccgaagatga taggtggttt
     1861 aacgcagcgt gagccgtagc tttgcaccca gccgtattgg gtgaatgcaa aaccgctcaa
     1921 cagttcgccg aagtattcga ccatgtcgtt acgctcggct tcgccgtgca ccagtacgtc
     1981 caagtccagt ttttcttgct cttcaaccac caaggcgatt tcttttttca ttgcggcttc
     2041 gtaatcggag gcagacagtt cgcctttttt gaaggctgcg cgtgcttggc ggatttcggt
     2101 agtttgcggg aaagaaccaa tgttggtcgt cggcagcaga ggcaggttca accatgcttg
     2161 ttgcgctttg atacggtcgg caaacggtga tttgcgttgg cctgcgttga caggcaggtc
     2221 ggccaagcgt ttggcaacgt ctgcacggtg gatttcactg ctgttggcac gggagtcggc
     2281 agcagcttgg ctggcggcca gttcttcggc aacagaatca cggccttcat tcaatgcggc
     2341 tttcagaaca cgcaattctt gggttttttg cagagtgaat gccaaccaag agtacaggtc
     2401 gggtttgttg gctttcagtt tttcttcgac tgacaagtca aacggagtgt gcagcagcga
     2461 gcaagagctg gaaatccaca aacgctcgcc cagtttggct tgcagaggcc cgacggtttc
     2521 caaaactttg ttcaggttgg cgcgccaaat gttgcggccg tcaatcacgc cggcagacag
     2581 gactttgtcg tagccggcga acgcgtccag ttgctcgggt gcgcgtacca agtcgatgtg
     2641 caggccgtca acaggcaggg atttcaacaa tgcggcgtgt tcggcaacag aaccgaagta
     2701 agtgcccaac aggattttgg cgcttacttt gttcaaagta gcgtaaacgt ctttgtatgc
     2761 ttctacccat tctttaggca gatcgacagc caaagcaggc tcgtcgattt gaatccactc
     2821 ggcaccggct tcaaccaaag cagtcaggat ttcaacgtaa acaggcaaca gtttaggcaa
     2881 caggctcaga cggtcgaatt caacggagcc tttttcttta cccacccaca ggaaagtcaa
     2941 aggaccgaca acggtcggtt tggctttcaa gcccaaagtt tgggcttctt gcagttgttg
     3001 aacgtagtgt ttggcgttgg ctttgaattc ggtatcggca tggaattcag gcaccaggta
     3061 gtggtagttg gtgtcgaacc atttggtcat ttcgatggcg aattggtctt tgttgccgcg
     3121 cgccagttgg aagaattgtt ccaaaggcag gttttggcta tcgaagccga aacgggcggg
     3181 aatcgcgccg gtggcaactt gcaggtcgag gatgtgatcg tagaaagtga aatcacctac
     3241 agcaacgtaa tcagcgttgg cagcagcttg gtgtttccag tttttctcgc gcaggtcttt
     3301 ggcaacgtcg agcagctctt gttcactgat ctctttgcgc cagtattttt cttgggcgaa
     3361 tttcaattca cggaaggcgc cgacacgcgg gaagcctgag aaatgtaatg ttgtcatgtt
     3421 gaactctcca gttggatttt gtaaggaccg gttcaatccg aatcggccgg tattgtaaat
     3481 cagaatggct cggatagggc ggcgttttgc ttttcagacg gcctcggatg ctgtctgaag
     3541 ccgttttcgg ctttaagggc gcgcgcctaa aatatggcag atggcgtaag tcagctcgct
     3601 gcggttgagc gtgtagaagt ggaaatcttt cacgccttcg cgggacagga ctttaaccat
     3661 atcgatggcg atactggcgg cgacgaggtt gcgcgtgcct tggtcgtcgt ccaagccttc
     3721 atacatttgc gacagccatt tcgggatttt gacgttggtt acttgtgcca ttttgccgag
     3781 ttgcttgaag ttggtaacag gcaggatgcc gggaacgatt tcgacgtcga tgcccaacat
     3841 cacgcagcgg tcgcggaagc gcaggtagcg ttccacatcg aagaagaatt gggtgatgac
     3901 gtggttcgcg cccgcatcga ttttgcgctt cagattaatc aggtcggctt gtgcggattt
     3961 cgcttcggga tgtacttcgg ggtatgctgc tacagagatg tcgaagtcgg cgacggagcg
     4021 taatagctta accaagtctt cggcgtaaaa cggttttttc tcataaccgg ccggctcgtc
     4081 gccacgcagg gcaacgatgc ggcggatacc gctgtcccaa tagtctttgg cgatttggcg
     4141 caattcgtcg tgggatgcat cgatgccggt caggtgcgga gctgcttcca agccggtttc
     4201 ctgtttgatg cgtttgacga tgccgtgcgt gcggtcgcgt tcgccggagt ttgcgccgta
     4261 agttacggat acgaacttgg gatgcagggt ttgcagacgg tggatggaat cccacagcat
     4321 cgtttccatt tgttcgtttt tcggcgggaa aaattcaaac gaaacgttga tgttgccttt
     4381 caaatcggaa aggctgttgt ttaacgcatt gatttctttt gcataattta tctgcatacc
     4441 ttcgttatct tttacatgat gtttcaggcg gtatgataag gttgcaccga atatgagtca
     4501 atttcaaaat tttcaggttt atgatgaaaa tttttaatat ttagcaaaaa ctatacgctt
     4561 ttcttgtaca agccttctaa attatgataa agtttgttat gttataacac ttcaatcaag
     4621 gcaatatatg aaaccgaata ttcatcctga caattatcga accgtccttt ttttcgacag
     4681 cagtgccaat gaaggctggc tgattcgttc ttgcgccgga acgcacggaa aaacaatggt
     4741 ttggacagac ggcaaagaat atccgctctt ttccttagat acttcctctt cctcacatcc
     4801 cgtctatacc ggcaaacagc gtaacgtcaa taccgaaggc cgtgccagca agttcaacca
     4861 acgtttccaa tccgtcatgt catcgtttag aaaggacaaa taatgcaggt tctgtcttcg
     4921 ctcaaaaccg ccaaacaacg ccaccgcgac tgccaaatcg tcagacgcag gggcaaagtg
     4981 tacgtcatct gcaaaagcaa tccgcgtttt aaatcgcgcc aacgctgacc ccctgccctt
     5041 cctgcttcgg ttgtaaagcc cctcctaccg caagcccttt tcaaatatgc cgtctgaaac
     5101 agaaaaatgc gtttcagacg gcattttccg tcgatacgaa tccggaatgt gtttgaaata
     5161 cagcataaac agataccaaa acagcgtcgc ggcggctgca ccgagcagta cccatgcgct
     5221 gatttcggcg acttcgcgca ggacacgttt ctgcctgcgg ctaaagaggc ggttgataat
     5281 cagcgcggca agtgcgaaaa agaaaaaaat acggaaaagt ctgcctatca tgtcgggaag
     5341 cgaaaagtat ggttcgggcg cggcggcatg ggaaaggatg tttcagcgcg tcaggctgct
     5401 tgtccgaccg tgtcaaaaag tcatgccgtt tgcgatataa taacgctttt cgccgcattt
     5461 gttggaacag gatatgagtc aaaatacctc ggtgggcatt gtaacgcccc aaaaaattcc
     5521 gtttgaaatg ccgctggttt tggaaaacgg taaaactttg ccgcgtttcg atctgatgat
     5581 tgaaacctac ggcgagctga atgctgaaaa aaacaatgcg gttttaatct gccacgcgct
     5641 gtcgggcaac catcacgttg cgggcaggca ttcggcggag gataaatata cgggctggtg
     5701 ggacaatatg gtcggtcccg gaaaaccgat tgatacggaa cgttttttcg tggtcgggtt
     5761 gaacaatctg ggcggctgcg acggcagcag cgggcctttg tcgatcaatc ctgaaacggg
     5821 cagggaatac ggcgcggatt ttccgatggt tacggtgaag gactgggtaa aatcacaagc
     5881 cgcgcttgcc gattatctcg gcatcgaaca atgggcggcg gttgtcggcg gcagcttggg
     5941 cggcatgcag gctttgcagt gggcgatttc ctatcccgaa cgtgtgcgcc acgccttggt
     6001 gattgcgtct gcgccgaaac tgtccgcgca aaatatcgcg tttaatgatg tagcacgtca
     6061 ggcgattttg accgaccccg atttcaatga aggacattac cgcagccaca acaccgttcc
     6121 cgcgcgcggt ttgcggattg cccgtatgat gggacacatt acgtatcttg ccgaagacgg
     6181 tttgggcaaa aaattcggac gcgatttgcg ttccaacggc tatcaatacg gctatagcgt
     6241 tgaatttgaa gtagaatcct atctccgcta tcaaggcgac aaattcgtcg ggcggtttga
     6301 tgctaataca tatttgctga tgaccaaagc tttggactat ttcgatccgg cggcggattt
     6361 cggcaacagc ctgactcgcg ccgtgcagga tgtgcaggca aaattctttg tcgccagctt
     6421 cagcaccgac tggcgtttcg cgcccgaacg ttcgcacgaa ctggtcaagg cactgattgc
     6481 cgcccaaaaa tccgtgcagt atatcgaagt caagtccgca cacgggcacg atgccttttt
     6541 aatggaagac gaagcctata tgcgcgccgt aacggcttat atgaacaatg ttgacaagga
     6601 ttgccgatta tgaacctgcg cgatgatttg caactgattt acgaccggat acccgaaggc
     6661 agccgcgtct tagacttggg ctgcggcgac ggcgaattgc tggcggcttt ggcggaacac
     6721 aaaaaatgca gcggctacgg catcgaaatc gacaccgaca acgtgattgc tgcgatgtcg
     6781 cgcggcgtaa atgttatcca agccgatttg gaagaagggt tgaccgcatt caacgatcaa
     6841 agttttgatg tgattgtttt gagccaaacc atccaagcga tgcagaatac cgaaaaaatc
     6901 ctgcgctgcc tgatgcgcct cgccaaacag gcaatcgtca gtttcccgaa tttcggctac
     6961 tggcgcaacc gcgtccaaat cgcactcggc ggacatatgc cggtttccga acgtatgccc
     7021 taccattggt acgacacgcc caatatccat tggtgcacgc tcaaagactt tgatttgttg
     7081 tgcgccaaaa acaatatccg cgtcctcgaa cgcgccgtga tgacgggcaa cagacaggtc
     7141 aaacatttcc ccaacctttt gggcagcctt gcgttttacc gcgtcgggta agacaggttg
     7201 aaaaccttgt cggcaataac gggtttctcg gttctattaa caacagtccg tctgaaaaat
     7261 gaaacggcag gttttcagac ggccttttca atattggaaa caatagaatg aaaaacaaaa
     7321 cgtcatcact tcccttatgg cttgccgcaa tcatgctggc cgcgcgttcc ccgagcaaag
     7381 aagataaaac gaaagaaaac ggcgcatccg ccgcttcgtc ttccgcgtcc caatccgatt
     7441 tgcaaccggc cgcatccgcc cctgataacg tcaagcaggc agaaagcgcg ccactgtgaa
     7501 attgcaccgg cctgcacccc gccgccggca ttggcgatct catacagcaa atcgccgaac
     7561 acatcgactc ggactgtctg tttgcccttt cccataacga actggaaacc cgtttcggct
     7621 tacccggcgg cggctatgac aacatacagc ggctgctgtt tcccgacatc cgccctgaag
     7681 atcccgacta ccatcagaaa atcatgctgg caatcgaaga cttgcgttac ggaacgcgca
     7741 ccatcagccg gcaggcacaa gatgccataa tggaacagga acgccgcctc cgagaagcga
     7801 cgctgatgct gacacagggc agtcaagaaa gccgagaaca aggcgaggaa ccgaaacgcg
     7861 cacgttattt tgaagtttcg gcaacatctg cctatttgaa ccggcacaac aacggactcg
     7921 gcggcaattt ccaatacatc ggccaattgc ccggctatct gaaaatgcac ggagaaatgc
     7981 ttgaaaacca atcactcttc cggctgtcca accgtgaacg caatcccgac aaaccgtttt
     8041 tagacatcca ttttgacgaa aatggcaaaa tcacgcgtat tgtcgtttac gaaaaaaata
     8101 tctatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgaagacag tacagatagt
     8161 acggcaaggc gaggcaacgc tgtactggtt taaatttaat ccactatact tcaatccaaa
     8221 cacggggcga atataaaaaa atgccgtctg aaacgttttc agacggcatt tttcaagtag
     8281 gatatcaggc gcgtttgcgg aattcgccgg tacgggtatc gatttcgact ttgtcgccgt
     8341 tttcgatgta agacatcact tggatttcgg tgccgccgac cagacgcgcg gttttcatca
     8401 ctttgccgga agtatcgcct ttgacggcag gctcggtgta gtcgacttcg cgcacgatga
     8461 tggtgggcag ttcgacagaa atgggattgc cttcatagaa ggtaacttcg cattggtctt
     8521 ccataccgtc aacgatgaat ttcaacgcgt cgccgatgtt gtcggcttcg atttcgtatt
     8581 ggttgaattc ttcgtccata aagacgtaca tcgggtcggc aaaatagctg tacgtacagt
     8641 ttttgcggga caggatgacc acgtcgaatt tgtcgtcggc tttgtaaatg gtttcggaag
     8701 cagcgccggt cagcaggttt ttcagtttca tgctgacttt ggcggaagag cggccgcctt
     8761 tgatgtattc ggttttttga acgaccatag gatcgttgcc gaccataaat acattgccgg
     8821 cgcgcagttc ttgtgctgtt ttcattgtga ttttccaatc aaatcggttg tcgtaaaacg
     8881 cgctattcta gcgtattttt tgatgctttg aaacaaaggc ggcgagtttt tcggatgcgg
     8941 aaggctgccc gaaaagataa cggctccaat cctccgcgcc ttgccgccag ccgttttgat
     9001 gttgttgcag ggtttgccaa cattcgaggc gttgtgttgc ggataaagcc tctccgccgt
     9061 tgaggtcgtc cgaaaggagg cggtgcaccg atgcggtttc gggcgtgtag aagccgtatg
     9121 ccttatccca aaaggcgtgg agtttgtcga gatggacatt ctcgtcttgc gggtagatgt
     9181 gccaaaaaaa gggttttccg gcaagctggg tacgcacgaa actgtcttcg ccgcgtatca
     9241 cggcgcagtc ggcgaggtgc agcaatttgt cgaagtcctg ttgcggcacg aacgggattt
     9301 tgacaaggcg gacggatgcc gtctgaaaga caccgccgtc attttgcagg gcgttttgcg
     9361 gaataacgcc gctttgtttg aggctgtcga taatttgcgc ccccgccagc agtagggtca
     9421 tcaggctgcc tgcctgttgc cacatgtcca gccactttgc ccaaacatcg ccccgatagc
     9481 cgaaaagcag ccattcgggg gcgttttttt cgggcagcac cagccgccgg cgcagggctt
     9541 cggtatcgaa acggacggct tcgcggtaat cgcgttcgcg tatcaacccg ccgctttttt
     9601 cgctgaaacc cataaaccaa aaatattttt gaacgccctc ctgcggcgaa ggcatcaggt
     9661 gcagcctttc attgctttcc tccgcgctca aatattccca attcagccaa agcggtttgt
     9721 gtcggcggat gatgttcagc acattttcgg gcaggtcgca ggcaaaagtt tcgataacgg
     9781 catcgggaac gggcgcggta tcaatgtctg ccgcatcgga atgccaagtg cggacatgaa
     9841 tatcctgatg aacgaaggga acatcgggca aatcgggaca aagcgcgcgc aaggcggaca
     9901 cgtcgtccgt ccacaaatgc acctgccaac cgagttcgcg gtgcaaaaca cgggcgagcc
     9961 gccacgaaac gccgatgtcg ccgaaattgt cgatgacctt gcaaaaaatc caacagacag
    10021 gaaaagcgta tgtattcata accatcggga aaacaagcta aaacgcgccg aaatagtgga
    10081 acaaatacac aaccagcaaa acaatcggaa taaacagaaa catggtttga cgtttcaaat
    10141 caaacccttg tttaagatga tgcttgatgg tttcaaagag gacgaattta aacaaaaacg
    10201 tcgcttcgca ggcaaggatg atgccgttga tcagatgctg gggtttgtct tcgggcggat
    10261 tggcggcgaa aacggcaagc gtcgccaagg ggatgaggca gacggcgagc cagcggacaa
    10321 gcaggtttcg ggacattgca aggctttcaa aaaagcaaaa cgccattatc gcctcaagaa
    10381 cgcaccttgt ctaacggacg cgccggagat gccgtctgaa gccttgccgc cggaaaacgc
    10441 cgcaccgccg aacctttaaa tatacccggg acgggcgttc cccgagaaat cggacgctgc
    10501 cgccgatgcc tgcggacaag gcggcatcgg gcgcgggcat attgaaaacc cgacgcatcg
    10561 gtttgaacgc attttataaa ggcgtacggc aaacccgccc cttgccgtcg gcgtgcttcc
    10621 gcaaagcaaa atataagggc ggcgcgcttt ccgctataat ccgcattttt ccaaacctga
    10681 aacattatgc cgaccccgaa agcctttacc ctgctcgggc cgaccgcctg cggcaaaacc
    10741 gcgctcgccc tcaaaatcgc cgaaaccctt ccggtcgaaa tcatcagcct cgattctgca
    10801 ctgctctata ccggtatgga catcggcacg gcgaaaccgt ccgcctccga acgcgccttt
    10861 gtcccgcacc accttatcga catcattacg cccgttcaga catacagtgc cgcccgtttt
    10921 gtcgaagact gcacgcgtct gaccggcgaa atcacggcgc gtgggaaatg tccgctgatt
    10981 gtcggcggca caatgatgta tttccgcgcc ctgacccaag gtttgaacga tttgcccgaa
    11041 gccgatgcct gcctgcgtgc cgacttggac gaacaaaaac agatgtacgg tttggatttc
    11101 ctctaccgca ccctgcaaaa agtcgaccct gaaacagcat gccgtctgaa accgaacgac
    11161 agccagcgca tcggacgcgc ccttgaagtc tattacctga ccggcaggcc gatgagcgcg
    11221 cacctgaacg gacagcccga acacaccctg cccttcgaac tctacaccgc cgccctgatt
    11281 cccgaagacc gcgcccgact gcacgaaaac atcgccctgc gtttccacct gatgcttgaa
    11341 cagggcttta tcggcgaagt agaaaacctg cgccgccgct atcccggcct gaccgccgac
    11401 tcccccgcca tccgctgcgt cggctaccgt caggcgtggg aacacctcga cggtgcaacc
    11461 gacagacaaa ccttcatcga aaaaggcatt gccgccacgc gccaacttgc caaacgccaa
    11521 ctgacttggt tacgcaaaac acctttagac tgcgttgccg acccgttttc agacggcact
    11581 tcaggcacgc gcctgattga ggcggcaaaa cggtttttcg gcgaataaac catgctggcc
    11641 acgccgccgc tcgcccccaa aaccgtcgcc gccctgcaca ggctcggtat ccgtacgctc
    11701 gaagaactgc ggcaaaacgg ttcggtcaaa gcctttctgc tgctcaaagc atcgggtttg
    11761 accctcacga aaagcacgct gtggcaactc gagtcgctgc tgaacggcac gccgccgcaa
    11821 gaaatgtccc aagcgcataa agactgcctg cttgccgagt tgaaaaacca tccgcccgtc
    11881 gccgcctttc cgccgcagga agaaatggga tacttcatgc gcgaagcact gcgccaagca
    11941 gaacaatccg ccgccgacgg cgaaataccc gtcggggcag tcatcgtttc agacggcaaa
    12001 atcatcgcat cggcacacaa cacctgcatt gccgactgca atgtcagccg acacgccgaa
    12061 atcaacgcct tggcacaggc aggcagcgaa atgcaaaact accgccttga cggatgcgac
    12121 atctacatca ccctcgaacc ctgcgccatg tgcgcgtccg cactgataca ggcacgaatc
    12181 aggcgcgtga tctacggtgc ggcagaaccc aaaaccggcg cggcaggcag tatcgtcaac
    12241 ctgtttgccg acaaacgcct caatacgcac accgccatac ggggcggaat cctgcaagaa
    12301 gaatgccgcg ccgtattaag ccgttttttc caaaacaaaa gaaaaggttg aacccatgac
    12361 cgccctactc gtcatcctcg ccctcgccct gatagccgtc ggcacggcag gcatcgtcta
    12421 tcccgccctg cccggcttgg cattgatgtt tgccggaaca tggctgcttg cctatgccgg
    12481 cggctatcaa atctacggcg caggcatctt gtggacggtc ggactcatca gccttggcgg
    12541 catactggcg gactatatgg caggcatgtt gggggtaaaa tacactgggg caggcaaact
    12601 cgccgtccga ggtgcattgg ccggcagcat catcggcata tttttctccc tgcccgggct
    12661 gatactcggc ccgctaatcg gtgcggctgc aggagagctc atcagctgcc gcaacatgat
    12721 acaggcaggt aaagcgggct tgggtacact gttgggactt gtcgtgggca cggcgttcaa
    12781 aatcggctgc gccgtatcca tcttgcttat cctgttggtg aaatacatcg cctacctgtt
    12841 ttaacccctt cagacggcat accggcaaat tgctataatg ccgtctgaaa tttccgacaa
    12901 agcaccatta tggcaaacca aagacccatc tacggcttcc acgccgtcaa cgcccgattg
    12961 tggcaaaacc ccaaatcgat taccgaactc tatatccaag aaggcaaatc cgacgcacgc
    13021 acgcgcgaag tgctggaaaa ggcggcaaac gaaaacatcc gcgtatattt tgccgatgcc
    13081 gaccgcctca acgccatcag caaaggcgcg cgccatcagg gcgtggtcgg atttatcgat
    13141 gcctccaaaa accacgtcca cctcgaagac gtattggaaa acctcagcga accgccgctg
    13201 ttgctgatac tcgacggcat caccgatccg cacaacctcg gcgcgtgcct gcgtaccgcc
    13261 gacgcaatgg gcgtacacgc cgtcatcgca ccgaaagaca aaagcgcggg actgaacgcc
    13321 accgtcagca aagtcgcctg cggcgcggcg gaaaccgtcc cctacatcac cgtaaccaac
    13381 ctcgcccgca ccctgcgcga attgaaagaa tacggcattt ggatcatcgg caccgatatg
    13441 ggcggcgagt ccgaccttta ccattgcaat ctgcccgaca gcacggcgtg ggtgatgggc
    13501 aacgaaggcg acggtatgcg ccgcctcacg cgcgaacatt gcgacatgct ggtgtccata
    13561 cccatgttcg gcacggtcga aagcatgaac gtctccgtgt ccgcaggaat ggtattaagc
    13621 gaaacccgcc ggcaacgcgt attgaaaaac aaaaaagcgt aagcctcaaa aacaatgccg
    13681 tctgaaacag ggattccgtt tcagacggca ttcgttttca aaatcagtgt tccaaatggt
    13741 cggtatcaaa cttgaccgcc gcctcggttt tatcttcggg caagaccaaa ttcagcaaga
    13801 ctgccgtaat gccgccgccg gaaatagagt tttggaacaa gacgggcagg tttttaaaca
    13861 cttccggctc aaaccccacg cccaagccca aaccgaccga cgttgccgca atcaccgcct
    13921 cgcgcctgcg gatgccgtgg ccgaccaaaa tccgcacgcc cgcaatcgca atcaggccga
    13981 acatcaaaac catcgcgccg cccaacaccg gactcggaat cgtcgtaaac gcgcgtccga
    14041 caacggggaa cagacccaac agcaccaaaa tcacggcaat atatttgccc acgtggcgcg
    14101 aagccactcc ggtcatctga atcacgccgt tgttttgcgc aaacgtcgtc agcggcagcg
    14161 aacccaaagc cgtcgcaatc accgatacca agccgtcagc caacacgccg ccgcgcaggc
    14221 gtttggtgta ttcttcgcct tcaatcggct ggtcggacac cattgccgtt gccgtcaaat
    14281 cgccgaccgc ctcaaacacg cccaacaaga aaatcgcacc cgccgcaata aatgcgtgcc
    14341 agtcaaaagc aaaaccatat ttaaacggta cgggcagcgt aaccggcggc aggttttgca
    14401 gtgcggaaaa atccaccttg cccaaaaaca gcgcgacaat agtagccggc aatcagaccg
    14461 accgcaatgc cgctcatccg cagcagcgga tttttcatgc agttgaacac cagcacaatc
    14521 agcagcacca gcgaagccag ccccaagttt tccatcgagc cgaacgtgcc gtccgccttc
    14581 gcgccgaagc cgccgccgaa atcggcaata ccgacgtgta ccaaactcag accaatcagc
    14641 atcacgacca cgccgctgac cgtcggcgta atcacttttt tcaaatacgg caaaagccac
    14701 gccgagaaac acaccaaaaa cgcaccggca aacgatacgc ccaagagcgt cgaaaccatc
    14761 gccccctcac tcaaaccgcc ctctttcatc cccgcgccga gcgcaatcat gacggtaacg
    14821 ctggatggac agcatccccg agccgaccgg cccgaagcgg ttgacctgca aataagtgcc
    14881 gatgccggaa gccaccatcg ccatcgacac gagatacgcc gtcatttcca ccggtagttc
    14941 cagcgcgccg cccacaatca gcgcgggcgt aatcatcggc acgaaaatcg ccaaaagatg
    15001 ggtaaccgcg ctcaagagcg cattaccgaa cggcggcctg tcttccaaac cgtacaccaa
    15061 atcaggcgaa tccgcctgtt ttttcattgt ttcagccatt ggagtctttc tatccgttgc
    15121 caaacgttaa aaaattttaa gaacgaaatt gtaacgaatc aaagattcct tatcaattca
    15181 aatcctcatg tgcaaaaaca ccaccggttg tccgaattca aatttctttg aatttccaca
    15241 ccggacagtc cttcatttcc agagagcctt catgcgctta acacatttta atcctcaacg
    15301 gcgcatccac tgcttaaacc caataatttc atgattataa aaaaaatatt atttattaag
    15361 atatgatggg acttaagcct tggaaccaac cgtgcggccg atatgtttca cacaaacaac
    15421 aaagtaagct acaatccgaa gcataatcga cctcactcaa tgaataaaag gtttccgtat
    15481 gttacaaggt agcttggttg ccctgattac cccgatgaat caagacggca gcatccatta
    15541 cgaccaactc cgccaattaa tcgactggca catcgaaaac ggcacggacg gcatcgtcgc
    15601 tgtcggcacg acaggcgaat ccgccaccct ctccgtcgaa gaacatttaa gcgtaatcga
    15661 agaaacggtc aaacacgttg ccaaacgcgt ccccgtcatc gccggcacag gggcgaacaa
    15721 caccgtcgaa gccatcgccc tttcccaagc cgccgaaaaa gccggcgcgg actacaccct
    15781 ctccgtcgtc ccctattaca acaaaccttc ccaagaaggc atgtaccgcc atttcaaagc
    15841 cgttgccgaa gccgccgcgg ttccgatgat actctacaac gtgcccggca gaaccgtcgt
    15901 cagcatgaac aacgaaacca tcctgcgcct tgccgaaatc cccaacatcg tcggcgttaa
    15961 agaagcaagc ggcaacgtcg gcagcaacat cgaactcatc aaccgcgcgc ccgaaggctt
    16021 cgtcgtcctt tccggcgacg accacaccgc cctgccgttc atgctctgcg gcggacacgg
    16081 cgttattacc gtagccgcca acgccgcccc gaaactcttt gccgatatgt gccgtgccgc
    16141 gctgcaaggc gacattgccc ttgcacgcga actcaacgac cggctgattc cgatttacga
    16201 caccatgttc tgcgaaccca gtcccgccgc accgaaatgg gcggtatccg ccttgggcag
    16261 atgcgaaccg cacgtccgcc tgccgctcgt tccgctgacg gaaggcggac aggcaaaagt
    16321 ccgcgccgcc ctgaaagcct caggacaact ttaaatatag ccatgccgtc cgaaccgttc
    16381 ggacggcata acatgacaaa cactttaata tccatcacac aggatgacac gatgacccat
    16441 atcaaacccg tcattgccgc gctcgcactc atcgggcttg ccgcctgctc cggcagcaaa
    16501 accgaacagc ccaagctcga ctaccaaagc cggtcgcacc gcctgatcaa actcgaagtc
    16561 ccgcctgatt tgaacaaccc cgaccaaggc aacctctacc gcctgcctgc cggttcggga
    16621 gccgtccgcg ccagcgattt ggaaaaacgc cgcacacccg ccgtccaaca gccagccgat
    16681 gccgaagtat tgaaaagcgt caaaggcgtc cgcctcgagc gcgacggcag ccaacgctgg
    16741 cttgtcgttg acggcaaatc ccccgccgaa atctggccgc ttctgaaagc cttttggcag
    16801 gaaaacggct tcgacatcga atccgaagaa cccgccatcg gacaaatgga aaccgagtgg
    16861 gcggaaaacc gtgccaaaat cccccaagac agcttgcgcc gcctattcga cacagtcggt
    16921 ttgggcggca tctactccac cggcgagcgc gacaaattca tcgtccgtat cgaacagggc
    16981 aaaaacggcg tttccgacat cttcttcgcc cacaaagcga tgaaagaagt gtatggcgac
    17041 aaaaacaaag acacgaccat gtggcagcct tccgcttccg accccaacct tgaggccgct
    17101 ttcctgacgc gctttatgca atatttgggc gttgacggac ggcaggcgga aaacgcattg
    17161 gcaaaaaaac cgacccttcc cgccgccaac gaaatggcgc gtatcgaagg caaaagcctg
    17221 attgtctttg gcgactacgg cagaaactgg cggcgcaccg gccttgccct cgaccgcatc
    17281 ggactgaccg tcgtcggtca aaacaccgaa cgccgcgcct tcctggttca aaaagccccg
    17341 aacgaaagca atgcagttac cgaacaaaaa ccggggctgt tcaaacgcct actgggcaaa
    17401 ggcaaagcgg agaaacctgc cgaacagccg gaactgattg tctatgccga gcctgtcgcc
    17461 gacggttcgc gcatcgtcct gctcaacaaa gacggcagcg catatgccgg caaagacgca
    17521 tccgcactgt taggcaaact ccattccgaa ctgcgttaaa ccgttcaaaa caaaagcagc
    17581 ttccaaatag aagctgcttt tttgtgcgga actttttaca acaaacgggg caaaatatcc
    17641 tcaaccgcct gaaccaacgc atccgccaaa ggcggatcga acgcacaatg ccccgcctgg
    17701 accaccctca attccgcttc gggaaaggct ttcgacagct cccacgcact ctgcataggc
    17761 gtacacaaat cataccgccc ctgcacgata acggtcggga tatgccgtat tttgccgata
    17821 ttgttcaaaa tcgccttatc accctgcaac caaccgccgt tgacaaaata atggttttcc
    17881 aaacgcgcga ttgccagtga ggcataagca tcttcatcca ctccctccgg ctcgaaacga
    17941 atcagatagc tttcccaatc cgcccaagcc ttcgcggcag acaggcacac ttcttcatct
    18001 tgatgaaaca gcaacccgtg atacgcctca atcagccggc tccgccgatt ttcagcaatc
    18061 ggcgcgacaa atttttgcca ttgttccgga taaatccggc tcacgccgcc cgcctcgttc
    18121 agccacgccg tttcagacgg cctgcacaaa aatatcccgc gcaacaccaa tccctttacc
    18181 cgttcgggat gggtttgggc ataagccagc gacaaagtgc tgccccacga accgccgaac
    18241 accagccatt tcccgatacc cagcatttca cggacttttt caatatccgc caccaaatcc
    18301 caagtcgtat tgtcttccgc acaagcatac gggtgcgaac gtccgcaacc gcgctggtcg
    18361 atgatgacga tgcggaacac atcaggattg aaaaaacccc gacattcagg cgaagccccc
    18421 gcgcccggcc cgccgtgtaa aaaaatgacc ggcacaccgt cgggattgcc cgactcttcc
    18481 caataaattt gatgaatttc agacacctgc aagtatccgc tatgaaaagg ctgttttatt
    18541 tcatacatca tcttctccca tattgcttct gacaatccga acatcccgac acgcgacatc
    18601 ccgcacgaaa cacaagccgc cccgaaaggc aaatgccgaa aaatcgcgat aaaaaccatc
    18661 aatcggaaaa tattgcataa acaggcgaaa atatatcatt gaaaagaaaa cccatacaat
    18721 gtctgacaga aacaagccgc tttgccattg tttcctaaca gttaaacccc gcccttcaag
    18781 gcggcggggc agggcttgat tcaaaatggc gcaagcccct gccctcaaat ccaacacgca
    18841 ggattaaacc ataatagcgg ctttcttatt atttcttatt gaaacaccgc ccggaacccg
    18901 atataatccg cctttcaaca tcagtgaaaa tcttttttta accggtcaaa ccgaataagg
    18961 agccgaaaat gaatccagcc cgcaaaaaac cttctcttct cttctcttct cttctcttct
    19021 cttctcttct cttctcttct cttctcttcc gcagcgcagg cggcaagtga aggcaatggc
    19081 cgcggcccgt atgtgcaggc ggatttagcc tacgcctacg agcacattac ccgcgattat
    19141 cccgatgcag ccggtgcaaa ccaaggcaaa aaaataagca cggtaagcga ttatttcaaa
    19201 aacatccgta cgcattccat ccaccccagg gtgtcggtcg gctacgactt cggcggctgg
    19261 aggatagcgg cagattatgc ccgttacaga aagtggaaca acaataaata ttccgtcaac
    19321 acaaaaaaga tgcgagaaaa aaatagcaac gggaaaaacg tggcggaata tctgaaggcg
    19381 gaaaatcagg aaaacggtac gttccacgcc gcctcctcgc tcggtttgtc agccgtttac
    19441 gatttcgata ccggttcccg cttcaaaccc tatatcggca tgcgcgtcgc ctacggacac
    19501 gtcagacatc aggttcgttc agtggaaagc gaaaccacga ttgtactcac tacaacgcct
    19561 ggcattgaag cgccaggcgt tatcaaaaaa ggtccgatcc cccagcctgc ttatcacgaa
    19621 agccgcagca tcagcagctt gggcttcggc gcagtggcag gcgtaggc
//
LOCUS       DAXGCP010000035        19666 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.035, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000035 DAXGCP010000000
VERSION     DAXGCP010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19666
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.035"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..974
                     /locus_tag="ACFJCW_001066"
     CDS             <1..974
                     /locus_tag="ACFJCW_001066"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151235.1"
                     /translation="LRRLVAAKVRRYCGEHPGVFDGAAGSGQLEQYIEPSDFRAVEIQ
                     AEACKALLQNYPAAKVYNTSLFLYTDGEPQDCTVMNPPFSIKLKDLSEDEKSRIAQEY
                     PWKKSGVADEIFVLKGLENARRFGFFILFPGIAYRKSEQRFREIIGNRPAELNRIQNA
                     FEDTPIEVLLLVIDKDKTDGGCIRELYDCKTDTLLAADTWQIEPDLWQTVQEPAPPKE
                     KEDPVLLEHECRDAAAKRIARELRFSKMVNEIEGWPHAEFDGFCDRLCNLIQAEKYGK
                     KTLLPVQPATFRRGGRLNNRPNRRTYAPTQAEHPPSRKKAETQTKQN"
     gene            990..1256
                     /locus_tag="ACFJCW_001067"
     CDS             990..1256
                     /locus_tag="ACFJCW_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin activator PrtN family protein"
                     /protein_id="HFC4151236.1"
                     /translation="MNISKEQGLLIAYGGRPYIPPREVHKDFFAHIGFNAFKASGVRC
                     ELPFPIFRLSDSRKSEYFVSVRELAKAIADKEEKAKSEYRKFRS"
     gene            complement(1306..2460)
                     /locus_tag="ACFJCW_001068"
     CDS             complement(1306..2460)
                     /locus_tag="ACFJCW_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC4151237.1"
                     /translation="MATITKRRNPSGETVYRVQVRVGKKGYPAFNESRTFSKKALAVE
                     WGKKREAEIEAGPELLFKRGKVKMMTLSEAMRKYLNETLGAGRSKKMGLRFLMEFPIG
                     GIGIDKLKRSDFAEHVMQRRRGIPELDIAPIAASTALQELQYIRSVLKHAFYVWGLEI
                     GWQELDFAANGLKRSNMVAKSAIRDRLPTTEELQTLTTYFLRQWQSRKSSIPMHLIMW
                     LAIYTSRRQDEICRLLFDDWHKNDCTRPVRDLKNPNGSTGNNKEFDILPMALPVIDEL
                     PEESVRKRMLANKGIADSLVPCNGKSVSAAWTRACKVLGIKDLRFHDLRHEAATRMAE
                     DGFTIPQMQRVTLHDGWNSLQRYVSVRKRSTRLDFKEAMMQAQSDIKSGK"
     gene            2580..3596
                     /gene="dusA"
                     /locus_tag="ACFJCW_001069"
     CDS             2580..3596
                     /gene="dusA"
                     /locus_tag="ACFJCW_001069"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HFC4151238.1"
                     /translation="MINKELIEHKGKRRLCVAPMLDWTDRHYRYLARQITRNAWLYSE
                     MVNAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGC
                     PSPRVQKGAFGACLMNEVGLVADCLNAMHDAVGIPVTVKHRIGVDRQTEYQTVADFVG
                     TLRDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPELEIIINGGIT
                     TNEAIAGHLQHVDGVMVGREAYHNPMVMREWDRLFYGDNRAPIEYADLVQRLYTYSQV
                     QIQAGRGTILRHIVRHSLGLMHGLKGARTWRRMLSDATLLKDNDGGLIFEAWKEVERA
                     NTRE"
     gene            complement(3666..4553)
                     /gene="gluQRS"
                     /locus_tag="ACFJCW_001070"
     CDS             complement(3666..4553)
                     /gene="gluQRS"
                     /locus_tag="ACFJCW_001070"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HFC4151239.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVTYQSRRYALYEETLYRLKTAGLVYPCHCNRK
                     DWQAGARRGTDGFVYNGRCRHPGQRPALQGKQPSWRIRVPDRDIGFSDGIVGSYTQNL
                     ARDIGDFVLFRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLGVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLKLPEAPETDRPAELLD
                     WAVAHWDMDKVPKHAITAP"
     gene            complement(4570..4860)
                     /locus_tag="ACFJCW_001071"
     CDS             complement(4570..4860)
                     /locus_tag="ACFJCW_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151240.1"
                     /translation="MAKALEIISPDEIYSDLIFKDPVPPHTIYTELMKLVGRNAGNER
                     IADRAFDFFSPALMDDSATEEQYNALYDLTLLEEPGMELDKDEITALINSLK"
     gene            complement(4865..4999)
                     /locus_tag="ACFJCW_001072"
     CDS             complement(4865..4999)
                     /locus_tag="ACFJCW_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151241.1"
                     /translation="MPSERLSDGIARLTGHSAAYQGSALKILMGKKLMHDITRQHKRK
                     "
     gene            complement(5011..6066)
                     /gene="tal"
                     /locus_tag="ACFJCW_001073"
     CDS             complement(5011..6066)
                     /gene="tal"
                     /locus_tag="ACFJCW_001073"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HFC4151242.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEVAALKRQNLSPKQRYETMAVADVRAACDVCLAEHESTGGKTG
                     FVSLEVSPELAKDAQGTVEEARRLHAAIARKNAMIKVPATDAGIDALETLVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIQVVASFFISRVDSALDATLPDRLK
                     GKTAIALAKAAYQDWEQYFTAPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDSL
                     IGVHTVNTVPDATLKAFIDHGTAKATLTESADEALARLAEIAALGIDVETLAARLQED
                     GLKQFEEAFEKLLAPLV"
     gene            6163..7137
                     /locus_tag="ACFJCW_001074"
     CDS             6163..7137
                     /locus_tag="ACFJCW_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HFC4151243.1"
                     /translation="MAENEKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSG
                     ESDEITAIIPALKRKDITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTISAERLATEALKVMQANHVNGLLVTDADGVLTGALNMHDLLAARIV"
     gene            7203..7739
                     /locus_tag="ACFJCW_001075"
     CDS             7203..7739
                     /locus_tag="ACFJCW_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HFC4151244.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDDGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQA
                     GLEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIIRAKGTLGAALNGYIK"
     gene            7736..8317
                     /gene="lptC"
                     /locus_tag="ACFJCW_001076"
     CDS             7736..8317
                     /gene="lptC"
                     /locus_tag="ACFJCW_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HFC4151245.1"
                     /translation="MKVRWRYGIAFPLILAVALGGLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPENSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGRRQAGKVETEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYNHKTGMLNFSSKVKAAIYDTKDM"
     gene            8298..8828
                     /gene="lptA"
                     /locus_tag="ACFJCW_001077"
     CDS             8298..8828
                     /gene="lptA"
                     /locus_tag="ACFJCW_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HFC4151246.1"
                     /translation="MIQKICKLFVLIVIFATSPAFALQSDSRRPIQIEADQGSLDQAN
                     QSTTFSGNVIIRQGTLNISASRVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVTYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTINGSTKSGAKSASKT
                     GRVSVVIQPSSTQKTE"
     gene            8899..9633
                     /gene="lptB"
                     /locus_tag="ACFJCW_001078"
     CDS             8899..9633
                     /gene="lptB"
                     /locus_tag="ACFJCW_001078"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HFC4151247.1"
                     /translation="MSANNSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTGFYMIVGLIAADAGSVMLDGRELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRNPAPSLSGGERRRVEIARVLAMKPR
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRAVYLGENFKY"
     gene            9824..9899
                     /locus_tag="ACFJCW_001079"
     tRNA            9824..9899
                     /locus_tag="ACFJCW_001079"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9857..9859,aa:Phe,seq:gaa)
     gene            complement(10173..10874)
                     /gene="mtgA"
                     /locus_tag="ACFJCW_001080"
     CDS             complement(10173..10874)
                     /gene="mtgA"
                     /locus_tag="ACFJCW_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HFC4151248.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWMPYKRISTNLKKALIASEDVRFAGHGGFDWGGIQNAIRRNR
                     NSGEVKAGGSTISQQLAKNLFLNESRNYLRKGEEAAITAMMEAVTDKNRIFELYLNSI
                     EWHYGVFGAEAASRYFYKKPAADLTKQQAAKLTALVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(10877..11686)
                     /gene="aroE"
                     /locus_tag="ACFJCW_001081"
     CDS             complement(10877..11686)
                     /gene="aroE"
                     /locus_tag="ACFJCW_001081"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HFC4151249.1"
                     /translation="MHALPRYAVFGNPAAHSKSPQIHQQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLVWLEDGRIRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTRAKA
                     EELARLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVSPKIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKKTADGLGMLVGQAAASYALWRGFKPDIRPVIEHMKAL"
     gene            complement(11765..11974)
                     /locus_tag="ACFJCW_001082"
     CDS             complement(11765..11974)
                     /locus_tag="ACFJCW_001082"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151250.1"
                     /translation="MAKYAERGGLTQSRHDFTTPMPSETGFASNSKPENIVSNGKIVN
                     NMLRFVCSKAECPPFCPNADKTDAV"
     gene            11997..13415
                     /gene="glnA"
                     /locus_tag="ACFJCW_001083"
     CDS             11997..13415
                     /gene="glnA"
                     /locus_tag="ACFJCW_001083"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HFC4151251.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGPAFDGSSIGGWKGIEASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWASGLHMDGQNTGHRPAVKGGYAPVAPIDCGQDLRSAMVNILEGLGIEVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            13564..14847
                     /locus_tag="ACFJCW_001084"
     CDS             13564..14847
                     /locus_tag="ACFJCW_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC4151252.1"
                     /translation="MTASKSGFIGQIFSRNMLVCIFTGFASGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRLPVLGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRVAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAHEPVLPPSVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWLFGAVQAITVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWMG
                     YVPFFRLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            14844..15119
                     /locus_tag="ACFJCW_001085"
     CDS             14844..15119
                     /locus_tag="ACFJCW_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC4151253.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALKQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(15295..15615)
                     /locus_tag="ACFJCW_001086"
     CDS             complement(15295..15615)
                     /locus_tag="ACFJCW_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151254.1"
                     /translation="MPSETGFQTALESQTLFAMPYMPNPVRYKLKTTIQKTEIHIIKQ
                     TNKLTYCAILRAVPYFPVLYMSGRHPHKRRDTDKEKSLGIKNILINQYKSNKQFIIFF
                     SVGV"
     gene            complement(15622..16755)
                     /locus_tag="ACFJCW_001087"
     CDS             complement(15622..16755)
                     /locus_tag="ACFJCW_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151255.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNTFVAKLVRLFRNADRAVVIVKESMRTEESLAETVDDGPLQSEKDYLALAVRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYYIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDYVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRGLSH"
     gene            complement(16875..17369)
                     /locus_tag="ACFJCW_001088"
     CDS             complement(16875..17369)
                     /locus_tag="ACFJCW_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151256.1"
                     /translation="MENRFEKIVKDIFSFTQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKDLFAEEVPENNIVCDISHFLHFADRA
                     EADIPNQSRLYAEYWWEMETFKMSVLKDWERSGRPLDWEKWQRQYQSEAFELVKNLNR
                     SKQE"
     gene            17391..17498
                     /locus_tag="ACFJCW_001089"
                     /pseudo
     CDS             17391..17498
                     /locus_tag="ACFJCW_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(17641..18042)
                     /locus_tag="ACFJCW_001090"
     CDS             complement(17641..18042)
                     /locus_tag="ACFJCW_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151257.1"
                     /translation="MKIKPLQFSNNNHRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKTENNSDGNPTANYFFEIIDDSYMDWLKEESFGF
                     FEKKYYKAYIFFFSDSVIEVISSTEPVFYSK"
     gene            complement(18446..18991)
                     /locus_tag="ACFJCW_001091"
     CDS             complement(18446..18991)
                     /locus_tag="ACFJCW_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC4151258.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLNNEVDNLSDMKRKPFAW"
     gene            complement(18978..19130)
                     /locus_tag="ACFJCW_001092"
     CDS             complement(18978..19130)
                     /locus_tag="ACFJCW_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151259.1"
                     /translation="MDAKSLDGKIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            complement(19112..19381)
                     /locus_tag="ACFJCW_001093"
     CDS             complement(19112..19381)
                     /locus_tag="ACFJCW_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151260.1"
                     /translation="MSVKELFKVILDKNKDFPIRTIHRTPMGILPKPVALSIVQYEND
                     PGFYLFYLDETGQEQTDTYHDTLDSAFEQAEFEFGISKEEWMQSP"
BASE COUNT         4746 a         5152 c         5015 g         4753 t
ORIGIN      
        1 gcttgaggcg gctggttgcc gccaaagtcc gccgatactg cggcgaacac ccgggcgtat
       61 ttgacggcgc ggcaggaagc gggcagctgg agcagtacat cgaaccgtcc gatttccgcg
      121 ccgtagagat acaggcggaa gcgtgcaaag ccttgttgca aaactaccct gccgccaaag
      181 tatacaacac aagccttttc ctttataccg acggcgaacc gcaagactgc accgtcatga
      241 atccgccgtt ttccatcaag ctaaaggatt tgagcgaaga cgaaaaaagc cgtatcgcac
      301 aggaataccc gtggaagaaa tcgggcgtag ccgatgaaat cttcgtttta aaaggattgg
      361 aaaacgcccg ccgcttcgga ttcttcatcc tgttccccgg catcgcctac cgcaaaagcg
      421 agcagcgatt ccgcgaaatc atcggcaacc ggccggcaga actcaaccgc atacaaaacg
      481 cgtttgaaga cacgccgatc gaagtgcttt tactggttat cgacaaagac aaaaccgacg
      541 gcggctgcat ccgcgaactg tacgactgca aaacagacac cctgcttgcc gccgacactt
      601 ggcaaatcga accggacttg tggcaaaccg tgcaagaacc tgcaccgccg aaggaaaagg
      661 aagaccccgt cctcttggaa cacgaatgcc gtgacgcagc ggcaaagcgg attgcccggg
      721 aattgaggtt cagcaaaatg gtcaacgaga tagaaggctg gccgcatgcc gaatttgacg
      781 gcttttgcga ccgcctgtgc aacctgatac aggcagagaa atacggaaaa aaaacactac
      841 ttcccgtgca gcctgccact tttcggaggg gcggccggct gaataaccgc ccgaacagga
      901 ggacttatgc accgacgcag gctgaacatc cgccaagccg taaaaaagcg gaaactcaga
      961 caaagcagaa ttaacagaaa gaggtatata tgaacatcag taaagaacaa gggcttttaa
     1021 tcgcatacgg cggccgcccg tatatcccgc cgagggaagt acacaaagac ttttttgccc
     1081 atatcggctt taacgcgttt aaagcatcgg gggtacggtg cgagcttccg tttccgattt
     1141 tccgattgtc cgacagccga aaatcggaat atttcgtcag cgtccgagag cttgcaaagg
     1201 caatcgcaga caaggaagaa aaggcaaaat cggaatatcg gaaattccgg tcttgatgca
     1261 agacggagga atcaggggat gcggcacatc ccctttaatt taacatcact tcccggattt
     1321 tatatcgctt tgcgcctgca tcattgcctc tttaaaatcc agccgcgtcg agcgtttgcg
     1381 tacgctcaca tacctctgca ggctgttcca accgtcatgc agcgttaccc gttgcatttg
     1441 cggaatcgtg aagccgtctt cagccatacg ggtagcagcc tcgtgccgta aatcgtggaa
     1501 gcgcaagtct ttaattccaa gaaccttgca cgccctcgtc caagcggcgg aaaccgattt
     1561 tccgttgcac ggtacaaggc tgtcggcgat gcctttgttg gcaagcatac gcttcctgac
     1621 cgattcctcc ggcagctcgt caatgaccgg caaagccata ggcagaatat caaactcctt
     1681 attattccct gtgctgccgt tcggattttt taaatcacga accggccggg tacaatcatt
     1741 tttgtgccag tcgtcaaaca gcaggcggca aatctcatcc tgccgccttg acgtataaat
     1801 cgccagccac ataatcaggt gcatcggtat ggaagatttc ctgctttgcc attgccgcag
     1861 gaaataagtt gtcagggttt gcagttcttc cgtggtcggc aatctgtccc tgattgcaga
     1921 tttcgcaacc atattcgagc gtttcagccc gtttgccgcg aaatccaatt cctgccagcc
     1981 tatttcaagc ccccacacat aaaaggcgtg ttttagcacg gaacggatat attgcagctc
     2041 ctgcaatgcc gtagaagccg cgattggcgc aatgtccagt tcggggattc cgcgccgcct
     2101 ctgcataacg tgttccgcga aatcagaccg tttcagctta tcgatgccga tgccgccaat
     2161 cgggaactcc atcagaaaac gcaagcccat tttctttgac cgacccgctc caagcgtttc
     2221 gttaagatac ttccgcatag cttcggacag cgtcatcatc ttgaccttgc cgcgcttgaa
     2281 aagcagttct ggaccggctt cgatttccgc ctcccgtttc ttcccccatt cgaccgccaa
     2341 agccttttta ctgaacgtcc tgctctcatt gaaagcagga tagcctttct tgccgacccg
     2401 tacctgaacc cgatatactg tttcgccgga aggattgcgc cgcttggtta ttgttgccat
     2461 ttgcaccatt ccaagaatta aaaattatgg tgcaagtatg gtacgtcaaa tatagtgaaa
     2521 tgggcaaaaa tccaagcaaa taataaagaa tgtttgagtt aaaagaatgt gaaaacctta
     2581 tgataaacaa ggaacttatt gaacataaag ggaaaaggcg tttatgcgtc gccccgatgc
     2641 tcgactggac ggacaggcac taccgttacc ttgcccgcca gattacccga aatgcttggc
     2701 tgtacagcga aatggtcaac gccggcgcga ttgtttacgg cgacaaagac cgctttttga
     2761 tgttcaatga aggcgagcag cccgtcgccc tgcaactggg cggcagcgat ccgtccgatt
     2821 tggcgaaagc cgccaaagcc gccgaagaat acggctacaa cgaggtcaac ctcaactgcg
     2881 gctgtcccag tccgcgcgtg cagaaaggcg cgttcggcgc gtgtctgatg aacgaagtcg
     2941 ggctggttgc cgactgcctc aacgccatgc acgacgcggt cggcatcccc gttaccgtca
     3001 aacaccgcat cggtgtggac aggcagaccg aataccaaac cgttgccgat ttcgtcggca
     3061 cgctgcgcga caaaaccgcc tgcaaaacct tcatcgtcca cgcccgcaac gcttggctgg
     3121 acggtctttc gcccaaagaa aaccgcgatg ttccgccctt gaaatacgat tacgtttacc
     3181 gcctcaagca ggagtttccc gagctggaaa tcatcatcaa cggcggcatc accaccaacg
     3241 aagcaatcgc cggacacttg caacacgttg acggcgtgat ggtcgggcgc gaggcatacc
     3301 acaacccgat ggtgatgcgc gaatgggaca ggctgtttta cggtgacaac cgcgccccga
     3361 tcgaatacgc cgatttggtg cagcgcctct acacatacag ccaagtccaa atccaagccg
     3421 gacgcggcac aatcctgcgc cacatcgtcc gccacagtct cgggctgatg cacggtttga
     3481 aaggcgcgcg gacttggcgg cgtatgcttt ccgatgcaac gctcttgaaa gacaacgacg
     3541 gcggcctgat tttcgaagcg tggaaagaag tcgaacgggc aaatacgcgc gaatagggcg
     3601 gggctgtatg tgtgaaatgc cgtctgaagg tttcagacgg catttgtgcg tttgtcgggt
     3661 ggtgtttagg gggcggtaat ggcgtgtttc ggcactttgt ccatatccca gtgtgccacc
     3721 gcccagtcga gcaattcggc agggcggtcg gtttccggtg cttcgggcag cttgaggtag
     3781 cggaacactt ggcggagaag ttgttcgcgg cggtttaaat ccaatgcggg ggcgagcgtc
     3841 tgcttcgacc atttctgccc ttgcgcgttg gtcagcagcg gcaggtgggc atattgcggt
     3901 gtcggaacgc ccaaacactg ctgcaaatag atttggcgcg gtgtggaaac gagcaggtct
     3961 tgtccgcgca cgatgtgggt aacgccctgt tcggcatcgt cggcaacgac ggcgagctgg
     4021 tatgcccagt aaccgtctgc acggaacagg acgaaatcgc cgatgtcgcg ggcgaggttt
     4081 tgggtgtaac tgccgacgat gccgtctgaa aagccgatgt cgcggtcggg gacgcggatg
     4141 cgccacgacg gctgtttgcc ttgcagtgca gggcgttggc cggggtggcg gcagcgtccg
     4201 ttatagacga acccgtctgt gccccgcctt gccccggcct gccagtcttt gcggttgcaa
     4261 tggcagggat agaccagtcc ggcggttttc agacggtata gggtttcttc atacagggcg
     4321 taacggcggc tctgataggt gacttcgccg tcccactcga atccgaatgc ctcgagcgtg
     4381 tgcaggatat ggcttgccgc ccccggcatt tcgcgcggcg gatcgaggtc ttccatacgg
     4441 accagccatt tgccgccgtt tgaacgtgca tcggcatagg aagcgacggc ggtcagcaga
     4501 gagccgatgt ggagcaaccc ggtcgggctg ggggcgaagc gtcctgtgta catatccggt
     4561 acagcccctt tatttaagac tattaatcaa agccgttatc tcatctttat ccagttccat
     4621 cccgggctct tcaagcaagg ttaaatcata tagggcatta tattgctctt cggtagctga
     4681 atcatccata agagcaggcg agaaaaaatc gaaggctcta tctgcaattc tctcattgcc
     4741 tgcatttcta ccaaccagtt tcatcaattc tgtatatata gtatggggag gtaccggatc
     4801 cttaaaaatc agatctgaat aaatttcatc gggtgaaatg atttcgagtg cttttgccat
     4861 gattctattt ccttttgtgt tggcgggtaa tgtcgtgcat taacttcttg cccattaata
     4921 tttttagggc ggatccttga tatgccgcac tgtgtccggt caaacgggcg atgccgtctg
     4981 aaagcctttc agacggcatc ggggaaatgc ctaaaccaaa ggcgcgagca gtttttcaaa
     5041 ggcttcttca aactgtttca aaccgtcttc ctgcaaacgc gccgccaagg tttcgacatc
     5101 gatgccgagc gcggcaattt cggcgagccg cgccagtgct tcgtccgcgc tttcggtcag
     5161 cgtcgctttc gccgtgccgt ggtcgataaa ggctttgagc gtggcatcgg ggacggtgtt
     5221 gacggtgtgc acgccgatca ggctgtcaac gtagagcgtg tcgggatagg ctgggttttt
     5281 cacgccggta gatgcccata aaagctgcac gcggtttgcg ccttgggctt ccagtgcggc
     5341 aaattcgggg gcggtgaaat attgttccca atcttgatag gcggctttgg caagggcgat
     5401 ggcggttttg cctttgagcc ggtcgggcag cgttgcatcc agcgcactgt ccacgcgcga
     5461 gatgaagaag ctggcgacaa cttggatatg ggcaacgctt tgtccggctg ccaagcgttt
     5521 ggcaatgccg cgcgcgtagg cggcgtaggc tttgagggtt tgggcgcgtg agaacagcag
     5581 ggtcaggttc acgctgatgc cgtctgaaac gagggtttcg agcgcatcga tgcctgcgtc
     5641 ggtggcaggc actttaatca tggcgttttt acgcgcgatg gcggcatgga ggcggcgggc
     5701 ttcttctacc gtgccttgag cgtctttggc aagttcggga gaaacttcga gactgacgaa
     5761 accggttttg ccgccggtgg attcgtgttc ggcaaggcaa acgtcgcagg ctgcccgtac
     5821 gtcggcaacc gccatggttt cgtagcgttg tttggggctg aggttttgcc gcttgagggc
     5881 ggcgacctcg tcggcataaa gcgcgtcgcc ggcgaaggct ttttggaaaa tggcgggatt
     5941 ggaagttacg ccgcacacgc cttgtttgag catttgcgcc aattcgccgc tttgcacgag
     6001 cgagcgggaa aggttgtcca gccagatttg ttgtcctaat gctttaacgt ccgataaaat
     6061 agtcattttt gattcctttg gatggatggg cggggtttga aggcttatgc taccccgatt
     6121 cggaaatttt gggtagtttt gttacagcaa aggcggatgg caatggcaga aaacgaaaaa
     6181 tatctcgact gggcgcgcga agtgttgcac accgaagcgg aaggcttgcg cgaaattgcg
     6241 gcggaattgg acgaaaactt cgtccttgcg gcagacgcgt tgttgcactg caagggcagg
     6301 gtcgtcatca cgggtatggg caagtccgga catatcgggc gcaaaatggc ggcaaccatg
     6361 gcctcgaccg gcacgcccgc gtttttcgtc caccctgcgg aagcggcaca cggcgatttg
     6421 ggcatgattg tggacaacga cgtcgtcgcc gccatttcca attccggcga aagcgacgaa
     6481 atcaccgcca tcatccccgc gctcaaacgc aaagacatta ccctcgtctg catcaccgcc
     6541 cgccccgatt caaccatggc gcgccatgcc gatatccaca tcaccgcatc ggtttcgcaa
     6601 gaagcctgcc cgttggggct tgccccgacc accagcacca ccgccgttat ggctttgggc
     6661 gacgcgttgg cggtcgtcct gctgcgcgcc cgcgcgttca cgcccgacga cttcgccttg
     6721 atccaccctg ccggcagcct cggcaaacgc ctgcttttgc gcgttgccga cattatgcac
     6781 aaaggcggcg gcctgcccgc cgtccgactc ggcacgccct tgaaaggagc catcgtcagc
     6841 atgagcgaga aaggtttggg catgttggcg gtaacggacg ggcaaggctg tctgaaaggc
     6901 gtgtttactg acggcgattt gcgccgcctg tttcaagaat gcgacaattt taccggtctt
     6961 tcgatagacg aagtcatgca tacacaccct aaaaccatct ccgccgaacg cctcgccacc
     7021 gaagccctga aagtcatgca ggcaaaccat gtgaacgggc ttctggttac cgatgcagac
     7081 ggcgtgctga caggtgcgct gaatatgcac gaccttttgg cggcgcggat tgtataaggc
     7141 gttgcagccg tttcagacgg catttgtggt aagatatgcc gtctgaaaac aaggaaatcc
     7201 caatgcaggc aatttctccc gaattacagg cacgcgccgc caaaatcaaa ctgctgatat
     7261 tggatgtgga cggcgttttg accgacgggc gcatctttat ccgcgacgac ggcgaagaaa
     7321 tcaaatcgtt tcacacactg gacggacacg gcctgaaaat gcttcaggca agcggcgtgc
     7381 agactgcgat tatcacaggt cgggatgcgc cctccgtcgg catccgcgtc aaacagttgg
     7441 gcataaatta ctacttcaaa ggcatttcgg acaaacgcgc cgcgtatgaa gagctgcgcg
     7501 cgcaggcagg cttggaagaa gccgagtgcg cctttgtcgg cgacgacgtg gtcgatttgc
     7561 cggtgatggt gcgctgcgga ttgccggttg ccgtccccga cgcgcattgg tttacgctgc
     7621 aacacgccgc ctatattgcc aaacgccccg gcggtgcggg cgcggtgcgc gaagtgtgtg
     7681 acctgattat ccgcgcgaaa ggtacgttgg gcgcggcttt gaacgggtac atcaaatgaa
     7741 agtaagatgg cggtacggaa ttgcgttccc attgatattg gcggttgcct tgggcggcct
     7801 gtcggcatgg ttgggccgta tcagcgaagt cgaaatcgag gaagtcaggc tcaatcccga
     7861 cgaacctcaa tacacaatgg acggcttgga cggaaggcgg tttgacgaac agggatactt
     7921 gaaagaacat ttgagcgcga aaggtgcgaa acagtttccc gaaaacagcg acatccattt
     7981 tgattcgccg catctcgtgt tcttccaaga aggcaggctg ttgtacgaag tcggcagcga
     8041 tgaagccgtt taccataccg aaaacaaaca ggttcttttt aaaaacaacg ttgtgctgac
     8101 caaaaccgcc gacggcaggc ggcaggcggg taaagtcgaa accgaaaaac tgcacgtcga
     8161 taccgaatct caatatgccc aaaccgatac gcctgtcagt ttccaatatg gtgcatcgca
     8221 cggtcaggcg ggcggtatga cctacaacca caaaacaggc atgttgaact tctcatctaa
     8281 agtgaaagcc gcgatttatg atacaaaaga tatgtaagct atttgtttta attgtaattt
     8341 ttgcaacttc tcccgctttt gcccttcaaa gcgacagcag acggcccatc caaatcgaag
     8401 ccgaccaagg ttcgctcgat caagccaacc aaagtaccac atttagcggc aatgtcatca
     8461 tcagacaggg tacgctcaac atttccgcct cgcgcgtcaa cgtcacacgc ggcggcaaag
     8521 gcggcgaatc cgtgagggcg gaaggttcgc ccgtccgctt cagccaaacg ttggacgggg
     8581 gcaaagggac ggtgcgcggt caggcaaaca acgttaccta ttcctccgca ggaagcaccg
     8641 tcgttctgac cggcaatgcc aaagtgcagc gcggcggcga cgttgccgaa ggtgcggtca
     8701 ttacctacaa caccaaaacc gaagtctata ccatcaacgg cagcacgaaa tcgggtgcga
     8761 aatccgcttc caaaaccggc agggtcagcg tcgtcatcca gccttcaagc acacaaaaaa
     8821 ccgaataacc ccgatgccgt ctgaaacgga aacgcagttc agacggcatt tgccgaccga
     8881 aatgccgaga agagatttat gagcgcaaac aacagccgcc tcgtcgtcca aaacctgcag
     8941 aaaagtttca aaaaacgcca agtcgtcaaa agtttctccc ttgagatcga aagcggcgaa
     9001 gtcatcggac tgctcgggcc caacggcgca ggcaaaacca ccggcttcta catgatagtc
     9061 gggctcatcg ctgccgacgc aggcagcgtg atgctggacg ggcgggaatt gcgccacctg
     9121 cccatacacg aacgcgcccg cctgggtgtc ggctacctgc cgcaggaagc ctcgatattc
     9181 cgcaaaatga ccgtcgaaca aaacatccgc gccatcttgg aaatcagaac caaagataaa
     9241 aatcaaatcg acagagaaat cgaaaaactg ctcgccgacc tcaatatcgg acacttgcgc
     9301 cgcaatcctg cgccgtcgct gtccggcggc gaacggcggc gcgtcgaaat cgcccgtgtc
     9361 ctcgccatga aaccacgttt catccttttg gacgaacctt ttgccggcgt cgatcccatc
     9421 gccgtcatcg acatccagaa aatcatcggt ttcctcaaat cgcgcggcat cggcgtattg
     9481 attaccgacc acaacgtccg cgagaccctc agcatctgcg accgcgccta catcatttca
     9541 gacggtgcgg tgctggcttc cggcaagccc gacgatttgg tcggcaacga acaggtgcgc
     9601 gccgtctatt tgggcgagaa cttcaaatat tgaagcgttt tgccgtctgc aaagcagaac
     9661 atcgccgaac gaacggcaaa aaaccgattt gcactatttt tctgtgaaat taatttaaac
     9721 ttaaaacatc gacttagtcg gttgggtaaa aaatatcgac aaatccgctt gcgtgtcgtc
     9781 ccgaaatttg gtttaatacg cacctcttaa cgagacagat acaggccaga tagctcagtt
     9841 ggtagagcaa cggattgaaa atccgtgtgt cggcggttcg attccgcctc tggccaccaa
     9901 aaaaccgctt ataagcggtt attttttgcc tgccgttttc ggcagcagtc ccgcaccgca
     9961 aatacctgcc atgcacgaca tggtctttgc ggctgtcggg caggttagtg gattaacaaa
    10021 aatcaggaca aagcgacgaa gccgcagaca gtacaacata gtacggcaag gcggggtaac
    10081 gccgtaccgg tttaaattta atccactata agaaccagaa aacatatgcc gtccgaaccg
    10141 cagttcagac ggcatttcca tatctgaaac aatcagtccg tatcgctttc gggtaattct
    10201 gccgaaccca tgcgtctgag cacgatattg gttttgttgc gcagccgttt gcttttcgga
    10261 tggtcagcgt agtagagcgg ggcggggacg agtgccgtca gtttcgccgc ctgctgtttg
    10321 gtcaggtctg cggccggttt tttataaaaa taccgggacg cagcttccgc gccgaaaacg
    10381 ccgtagtgcc attcgattga gtttaaatac agttcgaaaa tcctgttttt gtcggtaaca
    10441 gcttccatca ttgccgtaat ggccgcctct tcccctttgc gcagatagtt gcggctttcg
    10501 ttgaggaaga ggtttttggc aagctgctgg ctgatggtcg atccgcccgc cttcacttcg
    10561 ccgctgttcc ggttgcgcct gatggcgttt tgaatgccgc cccaatcgaa gccgccgtgt
    10621 ccggcaaaac ggacatcttc ggaagcaatc agggcttttt tcaggttggt ggaaatgcgt
    10681 ttgtagggca tccagcggta atccagtgcg acatcgcgac cttcttgttc aaactgcttc
    10741 atccgcatcg acataaaggc agtccgatgg ggcgcgacgg cgcggtaggt aatgatgttg
    10801 ccgtacacat aggcattgaa gaagataaag atgccgacgg gcagggcaat cagccatttg
    10861 acgatgcgga acatggttac agggctttca tgtgttcgat gacggggcgg atgtccggtt
    10921 tgaaaccgcg ccagagggcg taggaagccg ccgcctgacc gactagcata cccagtccgt
    10981 cggcagtttt tttcgcaccc gattgtcgtg caaaatctaa aaacggtttt gccgcttcgc
    11041 cgtaaaccat atcgtaggca aggcggcagt cgcggaaaat tttagggctg acggcaggaa
    11101 gctgaccgct caagccgccg gacgtgccgt tgatgatgat atcgaaaccg ccgttcacat
    11161 ccgccatcgg gacggcttca atgccgaaaa gccgcgccaa ttcctcggct ttggcgcggg
    11221 tacggttggc aatgacgata cgggcagggc ggtgttcttt caaaaccgga atcacgccgc
    11281 gcaccgcgcc gcccgcgccc aaaagcaaga tggttttgcc ctcgatggca atgtttttga
    11341 cctgcgtgat gtcgttggcc aaaccgatac cgtcggtatt gtcgccgcgt attctgccgt
    11401 cttccaacca caccagcgta ttgaccgcac cggcagccaa agcgcggtcg gaatgttcgt
    11461 ccgccagatg aaacgcttcc tgtttgaacg gtacggtaac gtttgccccg caaccgcctg
    11521 tttcaaaaaa tgtcgaaacc gcctgcgcga aaccgccgat gtcggcgcaa atgcgtccgt
    11581 attcgatgtc aacgccttcc tgaagggcaa attgctgatg aatctgcggc gatttgctgt
    11641 gggcggcggg gttgccgaaa acggcgtagc gggggagggc gtgcatagtc atattccata
    11701 aaggcggggc ggtcatttta taacggcggc gcgaagatgg gaacgatgcc gtctgaaacc
    11761 gccttcagac ggcatctgtt ttgtcggcat tcggacaaaa gggcgggcat tccgcttttg
    11821 aacagacaaa ccgaagcata ttgttgacaa tcttgccgtt tgaaactata ttttccggct
    11881 tggaatttga cgcaaaaccg gtttcagacg gcatcggcgt ggtaaaatcg tgccgacttt
    11941 gcgtcaagcc gccgcgttcc gcatattttg ccatttccct ttttcaggag ctgaagatgt
    12001 ccattaaaaa cgccgtaaaa ttgattgaag aaagcgaagc ccgctttgtc gatttgcgct
    12061 tcaccgatac caaaggcaag cagcaccact ttaccgtgcc tgcgcgcatc gtgttggaag
    12121 accccgaaga gtggtttgaa aacggaccgg cgtttgacgg ctcgtccatc ggcggctgga
    12181 aaggcattga ggcttccgat atgcagctgc gtcccgatgc gtccacagcc ttcgtcgatc
    12241 ctttttatga tgatgttacc gtcgtcatta cctgcgacgt catcgaccct gccgacggtc
    12301 agggttacga ccgcgacccg cgctccatcg cacgccgcgc cgaagcctat ttgaaatctt
    12361 ccggtatcgg cgacaccgcc tatttcggcc ccgaacccga attcttcgtc ttcgacggcg
    12421 tagaatttga aaccgacatg cacaaaaccc gttacgaaat cacgtccgaa agcggcgcgt
    12481 gggcaagcgg cctgcatatg gacggtcaaa acaccggcca ccgccccgcc gtcaaaggcg
    12541 gctacgcgcc cgtcgcgccg attgactgcg gtcaagattt gcgctccgcc atggtgaaca
    12601 ttttggaagg actcggcatc gaagtcgaag tccaccacag cgaagtcggt accggcagcc
    12661 aaatggaaat cggcacccgt ttcgccactt tggtcaaacg cgccgaccaa acccaagata
    12721 tgaaatacgt catccaaaac gttgcccaca atttcggcaa aaccgccacc tttatgccca
    12781 aaccgattat gggcgacaac ggcagcggta tgcacgtcca ccaatccatt tggaaagacg
    12841 gtcaaaacct gttcgcaggc gacggctatg ccggtttgtc cgataccgcg ctctactaca
    12901 tcggcggcat catcaaacac gccaaagccc tgaacgcgat taccaatccg tccaccaact
    12961 cctacaaacg cctcgtgccg cactttgaag caccgaccaa attggcctat tccgccaaaa
    13021 accgttccgc ttccatccgt atcccgtctg tgaacagcag caaggcgcgc cgcatcgaag
    13081 cgcgtttccc cgacccgacc gccaacccgt atttggcatt tgccgccctg ctgatggccg
    13141 gtttggacgg cattcaaaac aaaatccatc cgggcgaccc tgccgataaa aacctgtacg
    13201 acctgccgcc ggaagaagac gcgctcgtcc cgaccgtctg cgcttctttg gaagaagcac
    13261 ttgccgccct caaggccgac cacgaattcc tgctgcgcgg cggcgtgttc agcaaagact
    13321 ggatcgacag ctacatcgcc tttaaagagg aagatgtccg ccgcatccgt atggcgccgc
    13381 acccgctgga atttgaaatg tattacagcc tgtaaaccgt cgggtttcag tagcaatgcc
    13441 gtctgaacac agtttcagac ggcattttgc attggaacgg caaaccggcg gcgcgtggcg
    13501 gcatttttca gcaggcgggc gatatttgct acaataggct tttgtttttt ggctgtacga
    13561 acgatgactg catcgaaatc aggttttatc gggcaaatct tttcccgcaa tatgcttgtc
    13621 tgtattttta cggggtttgc ctcggggctg ccgctgtact ttctgattaa cctgattccg
    13681 gcgtggttgc gcagcgagca ggtggatttg aagagcatcg ggctgatggc gttgatcggt
    13741 ctgccgttta cttggaaatt tttgtggtcg ccgctgatgg acgcggtcag gctgcccgtt
    13801 ttgggacggc ggcgcgggtg gatgctgctg acgcaggcag ggttactggc ggctttggcg
    13861 gcatatgcct ttttaaaccc ccggaatcat ctgccgttga ttgccggcct gtcggtgctt
    13921 gtcgcttttt tttccgccag tcaggacatt gtattggatg cgttcaggcg cgagattttg
    13981 tcggacgaag aattgggttt gggcaactcg gttcatgtga acgcctaccg ggttgccgcc
    14041 ctgattcccg gttcattgag tttggtgttg gcagacagga tgccgtggtc agaagtattt
    14101 gttatcactt cattatttat gctgcccggc cttctgatga cgctgtttct cgcgcacgaa
    14161 cccgtgttgc cgccttccgt tcctaaaacg ttgaagcaga ccgtggtaga gccgtttaaa
    14221 gaatttttta cgcgcaaggg catcgcttcg gcggtgtgcg tgctgctgtt tatcttcctt
    14281 tacaaactcg gcgacagtat ggcaaccgcg ttggcaacgc cgttttatct ggatatgggt
    14341 ttcagcaaga ccgacatcgg tttgattgcc aaaaatgcag gactgtggcc ggcagtggcg
    14401 gcaggtatct tgggcggcgt gtggatgctg aaaatcggcg taaacaaagc cttgtggcta
    14461 ttcggcgcgg tgcaggcaat aacggttttg gggtttgtat ggctggcagg gttcggacat
    14521 ttcgacacgg tcggcacagg cgagaggctg atgctggcgg cagttatcgg cgcggaagcg
    14581 gtcggcgtgg ggttggggac ggcggcgttt gtatcgtata tggcgcgcga gaccaatccc
    14641 gcgtttacgg caacgcagct tgcgctgttt accagcctgt ccgccgtgcc gcgcacggtc
    14701 atcaattcct ttgcaggcta tctgatcgaa tggatgggtt atgtaccgtt tttccggctg
    14761 tgtttcatac ttgccctgcc gggtatgctg ctgctgctga aagttgcgcc ttggaacggg
    14821 gaaaaaaccc aggatgcagg cagatgaacg cgtcaaactg gagcgtttac ctgatattgt
    14881 gtgaaaacag cgcgttctat tgcggtatca gcccgaatcc gcaacagcgg cttgccatcc
    14941 acacagccgg aaaaggcgcg aaatataccc gcgtattcaa accggtggcg atgcgtatcg
    15001 ttgcaggcgg catggataaa ggcactgcgc tcaaacagga aatcgccgtc aaaaaactga
    15061 ccgccgcaca aaaacggcaa ttgtgggagc aggcagaaaa aatgccgtct gaaacctgac
    15121 ggttcaggtt cggacggcag ttggcagcaa tcagggaaaa gcgggacagg cggcaaggaa
    15181 aaccgatgtt tcaacgcaca ggacggcaca tagagcgtcg ccctatgaaa gtgaaggcat
    15241 atatcagtat ttttattttg ccgttttgat attttatttt tttccgagcg gtttttatac
    15301 gccaacagaa aagaaaatga tgaactgttt gttggatttg tattgattaa tcagtatatt
    15361 ttttataccg agggattttt ccttatcggt atcccttctt ttatgaggat gcctgccgct
    15421 catataaaga acgggaaaat acggtacagc cctcaatatc gcacaatatg tcaacttatt
    15481 tgtttgtttg ataatgtgta tttccgtttt ttggattgtg gttttcaatt tgtagcgaac
    15541 cgggttcggc atatacggca ttgcaaaaag cgtttgactc tccaatgccg tctgaaaacc
    15601 ggtttcagac ggcatttgcg ttcagtgaga aaggccgcgc ctgccgcccg aacgtctcgc
    15661 tgcagcctct gcataacggc tcacctcttt ttccaaatct tccaagttca aaggaaaatc
    15721 aggcagtctg tctccctgtt tctcttcgcg gataatccgc ccgccatcca aataccacgt
    15781 ctgttgcgca tgataggtct gcatatccgc cgttacgcca tccgctttca atgctaccgt
    15841 cgaagattgt gcaataaaaa gatttccgtt tttcaaataa tattcgaaac tctggcgttt
    15901 ttttccattg tcgaaactcc aatagacttt ttgcggcaga ccgtccgcat catagccgac
    15961 cacaagactg ttcgccttca tcccccgggg catcaattcc cgcatattct gataaaacac
    16021 ataatcgcgc gagtccgacg caatccggtt gctctcttcg cggaagtccc aaaccttctg
    16081 ctcgtcattc gcgacatccc ggtatttcgc caaatatacc tgggccatct gataacaccc
    16141 gaggcaatgc tcataaacat cttccccgat tttcccgcgc cccgacgcat caaataccga
    16201 accgtccggt tgccaaacaa cccgatattc tcctgtcgtt tcataatttt ccccgtgagc
    16261 cgttccgccg tacacattta cagaaaacgg acgatcgttc cgatacagat attcggcatt
    16321 aacaaacgct tccggcgatc gttgcaaaag cgaaaccgca accaaaccgc cctcgccgat
    16381 atagtaatcc agccagacct cttccccatg ttcctgctcc gttacgtgaa accatttcgc
    16441 cttttctttc aaacgactga gccggacagc gagtgcaaga taatccttct ccgactgcaa
    16501 cggaccgtca tccacagttt cggcaaggct ttcctccgtc ctcatcgatt ccttcacgat
    16561 gacaaccgcc ctgtcggcat ttcggaacag gcggacaagt ttcgccacaa aagtattcgg
    16621 attttcaggt atttcagttg ccgtatcgct caaaaaccaa cgcggattaa tctcataggc
    16681 aatgcccgtt cccagccaaa aggcaaatac aagtgcaaaa aatgacaaca ataccggttt
    16741 gaatttttta aacatattta tttttcgttt aacaggatat atcgattata tcaggcgggc
    16801 tttgattgtt tgatttttaa tctaatctac ggttgctacc gtactttaaa aacccctatg
    16861 caggctgcgg cttgttactc ttgtttgctt cggttcaaat ttttgactaa ttcaaatgct
    16921 tcggattgat attgcctttg ccatttttcc caatctagtg gtctgcctga acgctcccaa
    16981 tcttttaaaa ccgacatttt gaacgtttcc atttcccacc aatattcggc atataaacgt
    17041 gattgattgg gaatgtcggc ttctgcccga tcggcaaaat gcaaaaaatg agaaatatcg
    17101 caaactatat tattttcagg aacttcttcg gcaaatagat ccttaactga ctgtaatgct
    17161 tcggtctgat atttttctgt ccatttctcc catttttcag gctttcccga tatttcccaa
    17221 tcttccaatg cggaggcatt caggatttcc aattcccacc agcagtcgta ataacgggag
    17281 gattggttag gaattttatt ttccgcttcg gaaacaaatt gggtaaaact aaaaatatcc
    17341 ttaacgattt tttcaaatct attttccata ggttgctgcc tcttccaaat tatagtggat
    17401 taaatttaaa tcaggacaag gcgacgaagc cgcagacagt acagatagta cggcaaggcg
    17461 aggcaacgct gtactggttt aaatttaatc cactatacga gccaacaact tcggcaaaat
    17521 caagccggca agcccctgca tcctgtacta atcggagaaa atgccgtctg aaagccgaat
    17581 accgcttcag atggcatttt gattgttggg tttttaatca gagctttgtt tgataatttg
    17641 ttattttgaa taaaatacag gttctgtcga gctgataact tctattacag aatcgctaaa
    17701 aaagaaaata taagccttat aatatttctt ttcaaaaaaa ccaaaacttt cttctttcaa
    17761 ccagtccata taactgtcat ctattatctc gaaaaaataa tttgcagtag gattcccatc
    17821 cgaattattt tctgttttat tttcgaataa atattctgaa aattttactt tataagattc
    17881 atccgttatt tgaaaatgaa ttatattgtc aataaatatt tcaatattta attcataatt
    17941 tcggtcggat gccaaaatgt tcacatcttg ttcggtaaca caaattttgt ccacataaaa
    18001 tctgtgatta ttgttagaaa attgtaatgg tttaatcttc acaatcgttt tccatatcta
    18061 agttttgttt tcttattgcc ctgccggata aagcaggtct gcctccgtac tgtctatcct
    18121 cacatttact ttcctgccat cggcttttat ctccccggtt ttaccgtttt tgccaacttc
    18181 gcggctttgg cggtggcaat gttgaaggcg gcttcgacgg tttcggcggc attggggttg
    18241 acccgtactc atccgcaaac ggcaacacga cggacggtgt ttgcttttca gccgtctgcc
    18301 gttttgacca aggtgctgcc gtggaaggag caggtgtagg atttttgaag aactcagttc
    18361 tcaatatcct gcttcaaatg aaggaaagac catctgaaaa acaagcttaa tttcagacga
    18421 cctttaatca aatttaagaa agcccttacc aagcaaacgg tttccgcttc atatccgaaa
    18481 ggttgtcaac ttcattattc agcaagaact gctcaaaagc attccaacct ttcttttcca
    18541 ccaattctgc ttcctgttta tacaagggga caagcaaagg gaaaacgata ttgtagtgtt
    18601 cgccataaca gacctgaaaa tcatcatcga aataaaatgg ggcggaaaca tacagtgcat
    18661 ccattttgct accttcgata attaccctgg gtaattgaat aatttcacct cttaaaatag
    18721 gttgtctatt gtcaatcaaa tattcagcca ctcctgatag aaaagctgca atattttctt
    18781 tattccattc ttcagaacag gtaaaaatta attcaaacct actcttatag ttcaagtcat
    18841 atcgattcaa gcctaaagta gaaaaagtag ttaccccttt atatggttgt gatgggaaga
    18901 cggaaacgct gagatgataa cgtcgatcca agcattttat accgctttcg atttcaccca
    18961 aataatgttc taaatgttca actataatca ttttttctta aagatttcat ccctatcccg
    19021 gcaagacgta ggctgttttg ggctccaata ccgacttttt tattgacgga aatgccgtct
    19081 gaaaaataaa gcggcatctt gattttgccg tctaaggact ttgcatccat tcctctttgc
    19141 tgattccaaa ttcaaattca gcctgttcaa atgccgaatc taatgtgtca tgataagtat
    19201 ccgtttgttc ctgaccggtc tcatccaaat aaaacaaata aaatcccggg tcattttcat
    19261 attgaacaat acttaaagca acaggtttgg gaagtatccc cattggagtg cgatgaatcg
    19321 ttctaatagg aaaatcttta tttttatcta agataacttt gaataattct tttacactca
    19381 taattttcta atcctgaata attgttaccg cactattttc tattacacgt ccattggctt
    19441 tgtagccgtc tgccgttttg accaaggtgc tgccgtggaa ggagcaggtg taggattttt
    19501 gaaaaactta attcccaata tcctgtttca aatgaaggaa ataggtcgtc tgaaaattaa
    19561 acacggtttc agacgacctt ttaatcgtta ggtttacaat ctaacgtaat ccattcttac
    19621 ttatagatcg attaagagaa gcccaaacaa gcttccctgt agctga
//
LOCUS       DAXGCP010000036        19173 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.036, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000036 DAXGCP010000000
VERSION     DAXGCP010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19173)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19173)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19173
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.036"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            139..1113
                     /locus_tag="ACFJCW_001094"
     CDS             139..1113
                     /locus_tag="ACFJCW_001094"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HFC4151261.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDTFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILAKPEGALATESFLQTGRQQLAAGYVLYGPQTQ
                     LVFTFGHGVYVFTLNAENEFVLTKENPKVPESTKEFAINMSNRRHWLPPVQQYVDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYLQDKRDPSKPGKLRLMYEANPMA
                     LILEQAGASASNAYQAMLDIQPESLHQRVAVIMGSSEEVDYLNRLHSK"
     gene            complement(1272..1490)
                     /locus_tag="ACFJCW_001095"
     CDS             complement(1272..1490)
                     /locus_tag="ACFJCW_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HFC4151262.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLANNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
     gene            1684..1947
                     /locus_tag="ACFJCW_001096"
     CDS             1684..1947
                     /locus_tag="ACFJCW_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC4151263.1"
                     /translation="MKGTPQFPQCGFSARAVEVPTQIDRPFAFVNILENPEIRSTLPL
                     IANWPTFPRLWVNGELIGGSDIILQMYQSGELKPLIEEHSPKV"
     gene            2121..3935
                     /locus_tag="ACFJCW_001097"
                     /pseudo
     CDS             2121..3935
                     /locus_tag="ACFJCW_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
     gene            3999..4163
                     /locus_tag="ACFJCW_001098"
     CDS             3999..4163
                     /locus_tag="ACFJCW_001098"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151264.1"
                     /translation="MSNQTKIQAIKQTSEQILAICETPNTALQAIHLILRHGGAGRIV
                     LASGVSAGYG"
     gene            4108..4350
                     /locus_tag="ACFJCW_001099"
     CDS             4108..4350
                     /locus_tag="ACFJCW_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151265.1"
                     /translation="MAGQEELSWQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDVLP
                     LISLVLNKGDETLKTGMLNKLPDNAKENLRIMGYLP"
     gene            4417..5667
                     /gene="glyA"
                     /locus_tag="ACFJCW_001100"
     CDS             4417..5667
                     /gene="glyA"
                     /locus_tag="ACFJCW_001100"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HFC4151266.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDRRQQDHVELIASENYVSCAVM
                     EAQGSQLTNKYAEGYPAKRYYGGCEYVDIVEQLAIDRVKELFGAAYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLVAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETDARVLSNLVADVLANPE
                     DEANLAKVRGQVTALCDKYPVYGN"
     gene            complement(5740..6129)
                     /locus_tag="ACFJCW_001101"
     CDS             complement(5740..6129)
                     /locus_tag="ACFJCW_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4151267.1"
                     /translation="MEVHDKIRTLREVNQWTQEEMAEKLEMSVNGYSKIERGKSGINL
                     DKLRQIAQIFNIDVVELLAEQNRSFFFSIGDNTNNHHNIIGSDEMLVFENEKLRSLLD
                     AKDELIRQKDSEIAVLKKLVILLEEKK"
     gene            7069..7860
                     /locus_tag="ACFJCW_001102"
     CDS             7069..7860
                     /locus_tag="ACFJCW_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HFC4151268.1"
                     /translation="MKKALLALTIAAISGTAMAQLPDFLGKGEYTVRTDISKQTLKNA
                     DLKEKHKVQKNIGFRADMPFDDIHHGMRFEVSHSRDKKDMYVVTESTTKPFGKDVKEK
                     RTDVYAGYTYTQPLSEATKLRAGLGLGYEKYKDAVANEKGTVSTEREAFYTKAHADLT
                     SDLGGGWYLNPWAEVKVDLDAKLKHNATVAGVSADINAKTRGWGVGVGANIGKQITDT
                     VGIEAGPFYKHRHFKASNNFVLDGGNIRVDPTKINEYGVRVGVKF"
     gene            8011..8655
                     /locus_tag="ACFJCW_001103"
     CDS             8011..8655
                     /locus_tag="ACFJCW_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HFC4151269.1"
                     /translation="MLASVIDFILHIDQHLLSLSAQYGVWIYAILFLIVFCETGLIVT
                     PFLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRCEYLGKTRRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGIIEIARAKLAAKSER"
     gene            8674..10584
                     /locus_tag="ACFJCW_001104"
     CDS             8674..10584
                     /locus_tag="ACFJCW_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC4151270.1"
                     /translation="MNILSVENASFAVGHVALLDKTSFQLDSGEKVGLIGRNGAGKSS
                     FLKILTGVQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGEIRDLLRRYH
                     HVSHELENGSSELLLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGKKSGKIIAELEHASFAYDDKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENDTVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSI
                     VFEGQGRLKEYIGGYQDYIDAKSRENKIQTASAPKASDVEPAKEKPKANRTVKLSYKE
                     QRELDALPDEIAALETEQAEINAQLSDPGIFKDYEKAGALQNRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            10606..10972
                     /locus_tag="ACFJCW_001105"
                     /pseudo
     CDS             10606..10972
                     /locus_tag="ACFJCW_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11084..12559
                     /gene="trpE"
                     /locus_tag="ACFJCW_001106"
     CDS             11084..12559
                     /gene="trpE"
                     /locus_tag="ACFJCW_001106"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HFC4151271.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKAGGKHVDVYQNGEIVEQYDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETVYNFEHFAHRLKNTAKANPLGTPDILLMLSQEL
                     AVIDNLSGKIHLIVYADPSQPDSYERARERLEDIRTQLRQSCAIPLSLGSKQTQAVSE
                     FGEEPFKACVDKIKDYIFAGDCMQVVPSQRMSMEFTDNPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERDDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGCLKEGVTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEIEPEKRGIYGGAVGVWGFDNDMDLAIAIRTAVIKNNTL
                     FIQSGAGVVADSDPTSEWQETQNKARAVVRAAQMVQEGLDK"
     gene            12643..13581
                     /locus_tag="ACFJCW_001107"
     CDS             12643..13581
                     /locus_tag="ACFJCW_001107"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4151272.1"
                     /translation="MQFTSLEICAGAGGQALGLERAGFSHVALIEIEPSACQTLRLNR
                     PDWNVIEGDVRLFQGEGYDGIDLLAGGVPCPPFSKAGKQLGKDDERDLFPEAIRLAKE
                     TDPKAIMLENVRGLLDPKFENYRNHITEQFAKLGYLGQWKLLYAADYGVSQLRPRVLF
                     VALKNEYTNFFKWPEPNSEQPKTVGELLFDLMSENNWQGAHNWRLKAAQIAPTLVGGS
                     KKHGGADLGPTRSKRAWAELGVDGSGLWDSAPPEDFSGMPRLTVRMTARIQGFPDDWQ
                     FFGKKTPMYRQIGNAFPPPVAEAVGRQIIKALKKEN"
     gene            13582..14442
                     /locus_tag="ACFJCW_001108"
     CDS             13582..14442
                     /locus_tag="ACFJCW_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NgoMIV family type II restriction endonuclease"
                     /protein_id="HFC4151273.1"
                     /translation="MNPLFTQERRIFHKKLLDGNILATNNRGVVSNADGSNTRSFNIA
                     KGIADLLHSETVSERLPGQTSGNAFEAICSEFVQSAFEKLQHIRPGDWNVKQVGSRNR
                     LEIARYQQYAHLTALAKAAEENPELAAALGSDYTITPDIIVTRNLIADAEINRNEFLV
                     DENIATYASLRAGNGNMPLLHASISCKWTIRSDRAQNARSEGLNLVRNRKGRLPHIVV
                     VTAEPTPSRISSIALGTGEIDCVYHFALYELEQILQSLNYEDALDLFYIMVNGKRLKD
                     ISDLPLDLAV"
     gene            14459..15595
                     /locus_tag="ACFJCW_001109"
     CDS             14459..15595
                     /locus_tag="ACFJCW_001109"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003683536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HFC4151274.1"
                     /translation="MNTPPILPPAMLGILGGGQLGRMFAVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFDDRAALDELAKCAAVTTEFENVNADAMRSLAKHTNVSPSGDCVS
                     IAQNRIQEKARIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTLDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNDENVQTFDPAENIHENGILA
                     YSIVPARLSADVQQQARQTAQRLADELDYVGVLAVEMFVVGDTHELLVNETAPRTHNS
                     GHHTIDACAADQFQQQVRIMCNLPPADTKLLSPCCMANILGDVWQEDGGEPDWLPLQS
                     RPNAHLHLYGKKTAQKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            15642..16124
                     /locus_tag="ACFJCW_001110"
     CDS             15642..16124
                     /locus_tag="ACFJCW_001110"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC4151275.1"
                     /translation="MSLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LRQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            16230..17278
                     /locus_tag="ACFJCW_001111"
                     /pseudo
     CDS             16230..17278
                     /locus_tag="ACFJCW_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
     gene            17859..18464
                     /locus_tag="ACFJCW_001112"
     CDS             17859..18464
                     /locus_tag="ACFJCW_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HFC4151276.1"
                     /translation="MNTDFQKILKQLGKQAKKEAAEKQEAEKNKQKQEQDLDFSQAVG
                     QVSPLKNRQQYYAQSDKTPIKARPKDNRTDEENYFYIGSTYNDPPASFCKNGQGKNDI
                     QRLKNGYYTVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYVEPREGNDGCVRILLKRKLRQQD"
     gene            18527..18889
                     /gene="ssrA"
                     /locus_tag="ACFJCW_001113"
     tmRNA           18527..18889
                     /gene="ssrA"
                     /locus_tag="ACFJCW_001113"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         5370 a         5109 c         4283 g         4411 t
ORIGIN      
        1 ctgccgcgtt ccgacttgcc ccgcgccgtt ttttcccact acaatcccac gcgatatccg
       61 gcggaacgca ccaaaggaac gccccgcagc aatctgccgc ctttcagacg gcacaaacct
      121 ttccgaaacg agcaaaccat ggacacactg acccgattcc tccccgaaca cctgcaacaa
      181 aaccaactgc ccgaagcact cggcggcgtt ttgctgtccg tcgtttccgc ctgtaccgaa
      241 atcaacgcca aagtccgcct cggcgcactt gccggcgtat tgggtatggc gggcacgggc
      301 aatattcagg gtgaagacca aaaaaaactg gatgttatcg ccaacaacat tatgattgac
      361 acactcaaag ccaaccctgc cgttgccggt ttggcaagcg aggaagaaga cactttcgta
      421 agtgccggtg aaaacggacg ctatctcgtc ctattcgacc ctttagacgg atcgtccaat
      481 attgatgtca acatttccgt cggtacgatt ttctccattc tcgccaaacc cgaaggcgca
      541 ttggcaaccg aatcattcct tcaaacgggc agacagcagc ttgccgcagg ctatgtcctc
      601 tacgggcctc aaacccagct cgtattcaca ttcggacacg gcgtgtacgt atttacactc
      661 aatgccgaaa acgaatttgt gctgaccaaa gaaaacccga aagtacccga aagtaccaaa
      721 gaattcgcca tcaatatgtc taaccgccgc cactggctac cccccgttca acaatacgtc
      781 gacgagctct tggcgggcga aaccggtacg cgcggcaaaa actacaatat gcgctgggta
      841 gccagtatgg ttgccgaaat ccaccgcatc ctgatgcgcg gcggcgtgtt catgtatctg
      901 caagacaaac gcgacccgtc caaacccggc aaactgcgcc tgatgtacga agccaaccct
      961 atggccctga tactcgaaca ggcgggcgca tcggcaagca acgcatatca agccatgctc
     1021 gatatacagc ccgaaagcct gcaccaacgc gtcgccgtca ttatgggcag cagcgaagaa
     1081 gtggattacc tcaaccgtct gcattcaaaa taggcagaga ccgtactgat aaagaccggc
     1141 ggcagcgtga atccgatact gcgccgatat ttcaagcata ccctccggaa aaacagaaaa
     1201 ctgcctttcc gaacgataaa aataccgtct gaaaaatttt cagacggtat tttaaaaatt
     1261 aaagctcaaa tttatttgcc cgccgctttt tgcaggatgg cgtacaactc gtctttcagt
     1321 ttcaatttgg cttttttcag ctcatcgatg gtttccgcac cgctggtaac cggattgttg
     1381 gccagaccgg taattttatc gtccagctcg ttatgttcgt cgaacagacg ggcgaagcgg
     1441 gaattttcct gtttcaattt ggaaatcaaa tcacggtatt ctgggaacat atcgctttcc
     1501 tctcttggtt tacggttaat aaagtcaaat tgaatcttta cattaattat aacaaagata
     1561 atatttttat ccagtgtttt gttacacacg gcaacaccgt ccgcagaaaa ccgccccacc
     1621 gtccgataaa atcgttgaca atcttccgct ttacgcataa attttcagcc cttcctactg
     1681 tatatgaaag gcacgcccca gtttccccaa tgtggatttt cagcgcgcgc agtagaggtg
     1741 ccgacccaaa ttgacagacc ctttgctttt gttaatatcc tagaaaatcc agaaattcgc
     1801 agtactctac cactcatcgc caattggcca acctttccac ggctttgggt taatggtgag
     1861 ttaatcggtg gtagtgatat tatcctacaa atgtaccaat caggtgagct aaaaccactc
     1921 attgaagagc atagcccaaa ggtctgatta cttaatatct taaaataaat atcaaaaaag
     1981 actgctgatg acattagcgg tctttttttg atggtcaaga ttgatagttt ggattgaatt
     2041 atttagccat attacataca ataatcagca tgctttgtat gaattatcaa tcaaactcaa
     2101 actcaggcga aggagtgctt gtggctaaaa catatttatt gactgcattg ataatgtcta
     2161 tggtaatctc cggatgtcaa gtcatccatg ccaatcaagg taaggttaat actaattctg
     2221 ctgtcatcgc aggtgcagac gctcacacgc ctgaacatgt aacgggactg accgaacaaa
     2281 agcaggtgat tgcaagtgat tttatagtag cgtcagccaa tccattagca acacaagctg
     2341 gctatgatat cttaaagcaa ggcggtagcg ctgcagatgc gatggtggcg gtgcagacga
     2401 cactaagctt ggtagagcca cagtcgtcag gcttgggcgg tggtgcattt gtgttgtatt
     2461 gggacaatac cgccaaaaca ttgaccacat ttgatgggcg tgagacggca ccgatgcgtg
     2521 cgacgccaga attatttttg gataaagatg gttaaccatt gaaatttatg gaagcggtgg
     2581 tcgctcggta ggtacgcctg ctatccctaa actgacggag acaatacatc agcgatacgg
     2641 tgtattgcct tggggaaaat tatttgatac gccgatccac ttggcaaaac aaggctttga
     2701 ggtgtcgcca aggcttgcca tctcggttga gcaaaatcag cagcatttgg cacgctatcc
     2761 aaaaacagcc gcttattttt tgccgaatgg tgtgccgcta caagcaggca gcttgctgaa
     2821 aaatttagaa tttgctgaca gtgttcaggc gttagcagct caaggtgcaa aagctctgca
     2881 tactggtaaa tatgcccaaa atattgtttc agttgtccaa aatgctaagg ataaccccgg
     2941 tcaattatcc ttgcaaaatt tatctgatta tcaagtggtg gaacgcccgc ctgtttgtgt
     3001 gacttatcgt atttatgaag tatgcggtat gggtgcacca agctcaggtg ggattgctgt
     3061 gggtcagatt ttggggattt taaatgaatt ttcacccaat cgggtggggt atgatgctga
     3121 aggtttgcgt ctcttgggcg atgcttctag gcttgcgttt gcggatcgtg atgtatatct
     3181 tgggcgatgc ttctaggctt gcgtttgcgg atcgtgatgt atatttgggc gaccctgatt
     3241 ttgtaccagt acccattcgc cagttgattt ctaaagacta cctaaaacat cgcagccagc
     3301 tgcttgagca gtcggataag gcattgccta gcgtatctgc aggcgatttt attcatgagt
     3361 gggcgtcctc acaagcgatt gagttacctt ctaccagtca tatatcaatt gtggataagg
     3421 cgggcaatgt gctatcaatg acgacttcca ttgaaaatgc gtttggctca actttgatgg
     3481 caaatggcta cctgctgaat aatgagctga cagactttag ttttgagcca ataaagcagg
     3541 gcaaacaggt cgccaatcgt gtcgagcctg gcaagagacc acgctcctca atggcaccaa
     3601 ccatcgtatt taaagcaggc aagccttata tggcaatcgg ctctccaggt ggtagccgta
     3661 tcattggcta tgtcgctaag acgattgtgg cacatagtga ctggaatatg gatatccaag
     3721 atgccatcag tgcacccaat ttattaaatc gctttggtag ctatgaacta gaaacgggta
     3781 caaccgccgt ccagtggcaa caaacattaa atgatttggg ctataagact gatgtgcgtg
     3841 agctaaattc aggtgttcaa gccattatta tcgagccaag caggctggtt ggtggtgtcg
     3901 atccacgccg agaaggtcga gtgacgggtg attagaggtg aagcttgtat tttgtgaatt
     3961 tgaccgcatt aagttaatta ttaaaatagg gggaaattgt gagtaatcaa acaaaaatac
     4021 aagccatcaa gcaaacttct gagcagatct tggcaatttg tgagacgcca aacacagcat
     4081 tacaagccat tcatctgatt ttaagacatg gcggggcagg aagaattgtc ttggcaagtg
     4141 gtgtatcagc gggttatggc tgataaagat gtggttggtg ctggttattt gattgatttt
     4201 gcacaaactg ccgaaaattt accatttgat gtattgcctt tgattagcct tgtgctaaat
     4261 aaaggtgatg agacgctaaa aaccggcatg ttaaataaat tacctgataa tgccaaagaa
     4321 aatttacgca ttatgggcta tctgccttag gttttgaagt atttttttat acgaaaaacg
     4381 ctcatgatac cctgattaca caaaggagcc gagaatatgt tttcaaaaag cgttaccctc
     4441 gcacaatatg accccgattt ggcagcagcc attgcccaag aagaccgacg ccagcaagac
     4501 cacgtcgagc tgattgcctc tgaaaactac gtcagctgcg ccgtgatgga ggcacaaggt
     4561 tcgcaattga ccaacaaata cgccgaaggc tatcccgcaa aacgctacta cggcggctgc
     4621 gaatacgtcg atattgtcga acaattggca atcgaccgcg taaaagaact gtttggcgca
     4681 gcctatgcca acgttcaacc gcactccggt tcccaagcca accaagccgt atatgcttcc
     4741 gttttaaaac cgggcgacac cattttgggt atgtctctgg cgcacggcgg acacctgacc
     4801 cacggcgcga gcgttaatat ttccggcaaa ctctacaatg ccgttactta tggcttggat
     4861 gaaaacgaag tcctcgatta tgccgaagtc gaacgcctcg cgctcgaaca caaacccaaa
     4921 atgattgtgg cgggcgcgtc tgcctacgcg ttgcaaatcg actgggcaaa attccgcgaa
     4981 atcgccgata aagtcggcgc atacctcttt gtcgacatgg cgcactatgc cggactggtt
     5041 gccggcggcg aatatcctaa ccccgtgcca ttctgcgact tcgtaaccac taccacccac
     5101 aaaaccctac gcggccctcg cggcggtgtg attttgtgcc gtgacaatac ccacgaaaaa
     5161 gcgctgaact cttccatctt cccaagcctg caaggcggtc cgttgatgca cgttatcgcc
     5221 gccaaagccg tagcgtttaa agaagcgttg caacccgagt tcaaacaata cgcaaaacaa
     5281 gtgaaaatca atgctgccgt catggcggaa gagttggtta aacgcggttt gcgcatcgtt
     5341 tccggccgca ccgaaagcca cgttttcctc gtcgacctgc aaccgatgaa aatcaccggc
     5401 aaagccgccg aagccgcttt gggcaaagcg cacatcaccg tcaacaaaaa cgccatcccg
     5461 aacgatccgg aaaaaccgtt cgttacctcc ggcatccgca tcggttccgc cgccatgacc
     5521 actcgcggct ttaacgaaac cgacgctcgc gtattgtcga acttggttgc cgatgtattg
     5581 gctaatcccg aagacgaagc caacctcgcc aaagtccgcg gacaagtgac tgccttgtgc
     5641 gacaaatacc ccgtttacgg aaactaaacg cccgatgttt ccatacaaaa tgccgtctga
     5701 acattttcca gacggcattt tttgttttcg gtaacattgc tattttttct cttccagcaa
     5761 aatgaccaac tttttcaata ctgcgatttc actatctttc tgcctgatca attcatcctt
     5821 tgcatccagc agcgacctca atttttcatt ttcaaacacc agcatttcat cagagccgat
     5881 aatattatga tggttattgg tattgtcgcc gatagagaag aaaaacgatc ggttctgctc
     5941 cgccagcagc tcaaccacat cgatattgaa aatctgggca atctggcgca gcttgtcgag
     6001 attgataccg cttttcccgc gttctatttt cgaatacccg ttaaccgaca tttccaattt
     6061 ttccgccatc tcttcctgcg tccactgatt gacttccctt aacgtccgaa tcttgtcatg
     6121 cacttccatc ctgccctcca aggttaattt tcaccactca aacaaccgta accggtatct
     6181 tcagttgatg gtcggatatt ttaaaaataa ataatataac acaatagtat tttgataaaa
     6241 atttacctaa cgaggtacag acatgtattc agaaaacaag cctaaacgca ccgtaaaaat
     6301 gaaaaaatac tggcagcctg caccctttcc ctgtcccttt ctgcctgtac ttcgactcaa
     6361 gtaacttctt ttgtcgaggg actctccgag ggactcgtag atgtcagcga agcctttatc
     6421 acaacaaagg cagaatcata ttctgccccg tctcttcagg ataagcaaat tttcataaat
     6481 cgcgtctcag aacgagcaca aaaaaattac aaagaaagaa ggaaaaagaa agaagcagac
     6541 ttactaaatt cagcatcgtc attaaatgaa tcaacatcag aagccctatc tgcccttaaa
     6601 aacgctatcg taattcctaa acgccctaaa cgctccttgg gcaaaaaata taaaaacggt
     6661 tttcatcctg taaatacgtg tgcggatgtg gaagctcggt gggcaaacgg agcaatgaga
     6721 gatgttaggg acatagaaag gctaataagc cgaaacgtcc ctttacgtcg tatcggagac
     6781 gccattcaaa acatgtgcat ggaaaccaat gtgtccatta ggatgtatcg ccaggagtgc
     6841 cgttcagaat cgtcagattt ttatgacgaa atgcttgagc atcacgagaa tttcatagga
     6901 tcctccaaat cattcgcatc atcacttctt ccccttagcg ttacaaactt tacaacagac
     6961 atggcgtgta ctcccgaatt ttaatctaat cacactccac aactccctat caatataact
     7021 gctacttctc tgagtagtat caaccaaccc ttaacaaagg actaaaaaat gaaaaaagca
     7081 ctgcttgcac tgactattgc cgccatctcc ggtactgcta tggcccagtt gcccgacttt
     7141 ctgggtaaag gcgaatatac cgtccgtaca gacatctcca aacaaacgct gaaaaatgcc
     7201 gatttgaaag aaaaacacaa agtacaaaaa aacatcggtt tccgtgccga tatgccgttt
     7261 gacgatattc accacggcat gcgtttcgaa gtatcacaca gccgagacaa aaaagacatg
     7321 tacgttgtga ccgaaagtac tactaaacca ttcggcaaag acgttaaaga aaaacgcacc
     7381 gacgtgtatg ccggttacac ctacactcaa ccgctcagtg aagccaccaa actgcgtgcc
     7441 ggtttaggtt tgggctatga aaaatacaaa gatgcggtag ctaatgagaa aggaacagtc
     7501 agcaccgagc gcgaagcctt ctataccaaa gcgcacgccg acctgacttc cgatttgggc
     7561 ggcggctggt atctgaatcc ttgggcagag gttaaggttg acctggacgc caaattgaaa
     7621 cacaacgcaa ctgtagccgg tgtctcagcc gacattaacg caaaaacacg cggatggggc
     7681 gtgggcgtag gtgcgaatat cggcaaacaa attaccgata ccgtcggcat cgaagccggc
     7741 ccgttctaca aacaccgtca cttcaaagca tccaacaact tcgttttgga cggcgggaac
     7801 atccgagtcg atcctaccaa aatcaacgaa tacggtgttc gtgtcggcgt gaaattctaa
     7861 tcgcggcgat atgccccaaa cacaaaaccg caagcctttt ggtttgcggt ttttgatgtt
     7921 gtagcagacc ctaataccgt ctgaaacttt tcagacggta tttttccaat cggttaaaat
     7981 accgcctcga cattgtgttt tggaaaaccc gtgcttgctt ctgtgattga ttttatcctg
     8041 catatcgacc aacacctgct cagcctgtcg gcgcaatacg gtgtgtggat ttatgcgatt
     8101 ctgtttttga ttgttttttg cgaaaccggt ctgattgtta cgcccttcct gcccggcgat
     8161 tcgctcttgt ttgccgccgg cgggattgcc gcgctgggcg gtatggatat tcatttgatg
     8221 gttgcattat taagccttgc cgccatactc ggcgacgcgc tcaattttac cgtcggcaaa
     8281 tatttcggcg gcaggctgtt cgccaacccc gattctaaaa tcttccggtg cgaatacctc
     8341 ggcaaaaccc gccgttttta cgaaaaacac ggcggcaaaa cgattatcat cgcgcgcttc
     8401 gtgcccatcg tccgcacctt cgcccccttc gtcgccggta tgggaaaaat gcactatgcc
     8461 aaatttatcc gctacaacat catcggcggc ttgttgtggg ttatcttgtt ttcttacgcg
     8521 ggctatttct ttgccaactt ccccgtcgta aaaaacaatc tgggcttggt gatgggcggc
     8581 atcattattg tttccgtcct gcccggcatc atcgaaatcg cccgcgccaa acttgcggca
     8641 aaatccgaac gttaattgtt ggaaattgac attatgaata tattatccgt agaaaacgct
     8701 tcctttgccg tcggacatgt cgccctgctc gacaaaacgt ccttccaact cgacagcggc
     8761 gaaaaagtcg gcttgatcgg acgcaacggc gcaggcaagt cttcgttttt aaaaatcctc
     8821 accggcgtgc aaaaactcga cgacgggcag attattgttc aaaacaatct caaaatcgtt
     8881 tatgtgccgc aggagtcctt ttttgataag gacgcaaccg tatttgatac tgttgccgaa
     8941 ggtttgggcg aaattcgcga tttattgcgc cgttatcatc atgtcagcca tgagttggaa
     9001 aatggttcga gtgagctctt attgaaagag cttaacgaat tgcaacttga aatcgaagcg
     9061 aaggacggtt ggaaactgga tgcggcagtc aagcagactt tgggggaact cggtttgccg
     9121 gaaaacgaaa aaatcggcaa cctttccggc ggtcagaaaa aacgcgtcgc cttagcgcag
     9181 gcttgggtac agaagcccga tgtattgtta ctggacgaac cgaccaacca tttggatatc
     9241 gacgcgatta tttggttgga aaacctgctc aaagcgtttg aaggcagctt ggtcgtgatt
     9301 acccacgacc gccgtttttt ggacaatatc gccacgcgca ttgtcgaact cgatcgcggt
     9361 attttgcgct cctatcccgg ctcgttctcc aaatacagcg agaaaaaagc gcaagagttg
     9421 gcggttgaag ccgaacacaa ccgcctcttc gacaaattcc acgcgcagga agaggcgtgg
     9481 atacgcaaag gcatcgaagc gcgccgtacc cgcaacgaag gccgcgtgcg ccgtttggaa
     9541 gaactgcgcc gccagcgtgc cgaacgccgc aatgtacaag gacaggtcaa cttcaaactc
     9601 gacagcggca agaaaagcgg caaaatcatc gccgaactgg aacacgcttc gtttgcctat
     9661 gacgacaaag ttatcatgga taaattttcc gccatcttgc agcgcggcga caaaatcggc
     9721 ttaatcggcc caaacggtat cggcaaaacc accttcctta agctgatttt gggcgaattg
     9781 cagccgacct acggcagaat ccgtatcggc agcaagcagg aagtcgccta tttcgaccag
     9841 ttccgcagcg ccttgaatga aaacgatact gtgttttaca cgctcggaca gggcaacgat
     9901 tacgtcgaag tcggcggcaa gaaaaagcat gtgatgagct atttggaaga tttcctgttc
     9961 ccccctgccc gcgcgcaaag tcctgtttct tcactctccg gcggcgaacg caaccgcctt
    10021 ttgctggcaa aactctttac tcgtcccgcc aatattttgg ttttggacga accgaccaac
    10081 gacttggaca tcgacaccca agaattgctt gaagatctgt tgcgcgatta ccaaggcacg
    10141 gtattcctcg tctcgcacga ccgtatgttc ctcgacaatg taattaccca aagcattgtt
    10201 ttcgaaggac aaggccgtct gaaagaatac atcggcggct atcaggacta tatcgacgca
    10261 aaatcgcggg aaaataaaat tcagacggca tccgcaccca aagcatccga tgtcgaaccc
    10321 gccaaagaaa aacccaaagc caaccgtacg gtcaaacttt cctacaaaga acagcgcgaa
    10381 ctcgacgccc tgcccgacga aatcgccgcc ttggaaaccg aacaggcaga aatcaacgcg
    10441 cagctttccg atcccggaat tttcaaagat tacgaaaaag caggagcatt gcaaaaccgc
    10501 gccgaagaaa tcgaaatgct gcttttggaa aagctggaac gctgggagct gctggaaacc
    10561 aaacagaacg gcaatgccgt ctgaaatcaa acaggaagaa aaaaaatgtt caaacgacct
    10621 gaagaaatca tcgtcctgat acttgccatc ctctggattg ccggtacgta ttttctcgcc
    10681 gccctgtttg gagcggatgc ttataccgtg ttaaaaatca ctgcccttac cctgctttgg
    10741 tctgccgcat cattcctcct ttggcaaaaa aaacctcagc cggcatatct ggccgctgct
    10801 gctcggctgc ctgactgcct gttggtggcc gtatctgaat caatcggtcg cacccggttc
    10861 tttaccttgg catgcatcat ggacgttcaa aaccatctta gccctgattc ccgcaaccgc
    10921 aggttatctg tttaaatgga aacaataccg gcagcgcaaa acaaagccgt aagcccgtct
    10981 tttttcagac gccatctccg gtcagactgt caacaattcc gataaaatgt tatactcgcg
    11041 cccgttgccg cgccgtccga aaccgccttt tgggaaagca gaaatgatca gcaaacaaga
    11101 ataccaagcc caagccgccc aaggctacaa ccgcatcccg ctcgtgcaag aactccttgc
    11161 cgacttggat acgccgcttt ccctctatct caaactcgcc aaccgcccct atacctacct
    11221 gctcgaatcc gttgtcggcg gcgaacgttt cggccgctat tcctttatcg gcctgccttg
    11281 cagccactat ctcaaagccg gcggcaaaca cgtcgatgtt tatcaaaacg gcgaaatcgt
    11341 cgaacaatac gacggcaatc cgctaccctt tatcgaagct ttccacaacc gtttcaaaac
    11401 acccgaaatc ccaagcctgc cgcgctttac cggcggcttg gtcggctact tcggttacga
    11461 aaccgtctac aatttcgaac acttcgccca ccgcctgaaa aacaccgcca aagccaaccc
    11521 gctcggcacg cccgatattt tgctgatgct gtcgcaagag ttggcggtaa tcgacaattt
    11581 gagcggcaaa atccacctca tcgtttatgc tgatccctcg cagcccgaca gctacgaacg
    11641 cgcccgcgaa cgcctcgaag acatccgcac ccagttgcgc caaagctgcg ccatcccact
    11701 ttccctcggc agcaaacaaa cccaagcagt cagcgagttc ggcgaagaac ctttcaaagc
    11761 ctgcgtcgat aaaatcaaag actacatttt cgcaggcgac tgtatgcagg tcgtccccag
    11821 ccaacgcatg agcatggaat ttaccgacaa tccgcttgcc ctctaccgcg ccctgcgcac
    11881 gctcaaccct tcgccttacc tcttttacta cgatttcggc gatttccaca tcgtcggttc
    11941 ctcgcccgaa atcctcgtcc gccgcgaacg cgacgacgtc atcgtccgcc ccatcgccgg
    12001 cacgcgcctg cgcggcaaaa cccccgccga agaccttgcc aacgaacaag atttgttaag
    12061 cgacgccaaa gaaatcgccg aacacgttat gcttatcgat ttagggcgca acgatgtcgg
    12121 acgcatcagc aaaacaggcg aagtcaaagt caccgacaaa atggtgattg aaaaatactc
    12181 ccatgtgatg cacatcgttt ccaacgtcga aggctgtctg aaagagggcg ttaccaatat
    12241 ggacatcctc gccgccacct tccctgccgg cacactctcc ggcgcgccaa aagtccgcgc
    12301 gatggaaatc atcgaagaaa tcgaaccgga gaaacgcggc atctacggcg gcgccgtcgg
    12361 cgtatggggc ttcgacaacg atatggattt ggcaatcgcc atccgcaccg ccgtgattaa
    12421 aaacaatacc ctcttcatcc aaagcggcgc gggcgtggtt gccgactccg acccaacttc
    12481 cgaatggcag gaaactcaaa acaaagcccg cgcagtggtt cgggcggcgc agatggtgca
    12541 ggaagggttg gataaataaa tttcagacaa cctttgcaga tgaaaaaaag gtcgtctgaa
    12601 aatcacaaaa caacatcaga gatacttaca taaaaaatca caatgcaatt cacatcatta
    12661 gaaatttgtg ccggagcagg cggacaggct ttgggcttag aaagggcagg cttttcccat
    12721 gttgcgttaa tcgaaatcga accgtcggct tgtcaaaccc tacgtttaaa ccgtcctgat
    12781 tggaacgtta ttgaaggaga tgtccgcttg tttcagggcg aaggatatga cggtattgat
    12841 ttattggccg gcggcgtgcc ttgccctcct ttttccaaag ctggaaaaca actgggaaaa
    12901 gatgatgaac gcgatttatt ccctgaggct attcgtctag ctaaggaaac tgaccctaaa
    12961 gccatcatgt tagaaaatgt gcgggggtta cttgacccaa aatttgaaaa ttatcgcaac
    13021 catattacag aacaatttgc caagttgggt taccttggac aatggaaact actttatgct
    13081 gccgattacg gagtatcgca actcagaccc agggttttat ttgttgcgtt gaaaaacgaa
    13141 tacaccaatt ttttcaaatg gcctgaacca aattcggaac aaccgaaaac cgttggagaa
    13201 ctgctttttg acttaatgtc agaaaataac tggcaggggg cgcataactg gcgtttgaag
    13261 gccgcgcaga ttgcaccgac cttggtcggc ggttcaaaaa aacacggcgg tgctgacttg
    13321 ggacctacac gatccaaacg cgcatgggcg gagttgggtg tggatggttc aggtttgtgg
    13381 gatagtgcgc cgcctgaaga cttttcggga atgcctagat tgactgtccg aatgacggcg
    13441 cgtatccaag gatttcctga tgactggcaa ttttttggta aaaaaacgcc tatgtaccgc
    13501 caaatcggca acgcttttcc cccgccggta gccgaagcgg tgggcaggca gattatcaaa
    13561 gccttaaaaa aggaaaattg aatgaatccg ctttttaccc aagaacgcag gattttccat
    13621 aagaaattat tggatggcaa tattcttgca accaacaata gaggcgtagt cagcaatgcg
    13681 gatgggagca atacccgaag tttcaatata gccaagggga ttgccgactt actgcattcg
    13741 gaaacggttt cggaaagatt acccggtcag acatcgggaa atgcttttga agcaatatgc
    13801 agtgagtttg tccaatctgc ttttgagaaa ttgcagcata tcagacccgg cgactggaat
    13861 gttaagcagg tcggttctcg caaccgtctg gaaatcgcac gttatcagca atacgcacat
    13921 ctgacagcct tagccaaggc tgccgaagaa aaccccgaat tggctgccgc cttgggcagt
    13981 gattacacca ttactcccga tattatcgtt accagaaatt tgattgcaga tgcagaaatc
    14041 aaccgtaatg aatttttagt tgatgaaaat attgccacat atgccagttt gcgtgcgggt
    14101 aatggcaata tgccgctgct ccacgccagt atctcttgta aatggacgat tcgcagcgac
    14161 agggctcaaa atgcccgttc tgaaggattg aatttggtta gaaacagaaa aggcagactg
    14221 ccgcacattg ttgtcgtaac ggcagaacca acgccaagcc gcatttcatc tattgccttg
    14281 ggtacagggg aaatagattg cgtttaccat tttgccttat atgagctgga acaaatttta
    14341 caatcattga attatgaaga cgctttggat ttgttttaca tcatggtcaa tggtaaacga
    14401 ttaaaagata tttccgacct tcccttagat ttggcagttt aaacagaatt attccactat
    14461 gaacacaccc cccatccttc ctcccgccat gctcggcatc ctcggcggcg gacaattagg
    14521 cagaatgttt gccgttgccg ctaaaaccat gggctacaaa gtaaccgttc tcgatcccga
    14581 cccgaatgcg ccggcggcgg aatttgccga ccgccatttg tgcgcgccgt ttgacgaccg
    14641 ggccgcgttg gacgaattgg caaaatgcgc ggcggttacg accgaatttg aaaacgtcaa
    14701 tgccgacgcg atgcgctctc tggcaaagca taccaacgtt tcccccagcg gcgactgcgt
    14761 gtccattgca caaaaccgca ttcaggaaaa agcgcggata cgcaaagcag gcttgcaaac
    14821 cgcgccgtat caggcggttt gcaaggccga agacattact gaagcaagcg cgcaattttt
    14881 gcccggcatc ctgaaaacgg ctacgttggg ctacgacggc aaaggtcaaa tccgcgtcaa
    14941 aacgttggac gaactcaaag ccgcgtttgc cgaacacggc ggcgtggatt gcgttttgga
    15001 aaaaatggtg gacttgcgcg gcgagatttc cgtgatcgta tgccgtctga acgatgaaaa
    15061 cgtgcaaacc ttcgaccccg ccgaaaacat ccacgaaaac ggcatcttgg cttattccat
    15121 cgtccccgcg cggctgagtg ccgacgtgca gcaacaggcg cggcagacgg cgcaacgctt
    15181 ggcggacgaa ttggattatg tcggcgtatt ggcggtagaa atgtttgttg tcggcgacac
    15241 acatgaattg ctcgtcaatg aaaccgcccc gcgcacgcac aattccggcc accatacgat
    15301 agatgcctgc gccgcagacc agttccaaca gcaggtacgc attatgtgca acctgccgcc
    15361 cgccgacacc aaattattat ccccttgctg tatggcgaat attttgggcg acgtttggca
    15421 ggaagatggc ggcgaaccgg attggctgcc gttgcaaagc cggccgaatg cacacctgca
    15481 cctatacgga aaaaaaaccg cacagaaagg tcggaaaatg ggacacttta ccgttttgac
    15541 caccgattcg gacaccgcat ttcaagaagc aaaaaaactg catcagtccc tataatccga
    15601 ccaacggcac agatgccgtc tgaagccgcc gacataccgc catgagcctg ctgacactgt
    15661 tacgccccgc caccgtgcaa gactgcaaag acatcttcaa agtccacctg cactccgtcc
    15721 aatacacctg catcctcagc tacaacgaac acgccctaaa agtatgggaa ggcttgttaa
    15781 acacagaaag ctacctgccg accatttccg atcccgacaa agcactttgg gttgccgaat
    15841 acaaaggcaa catacaggga tttttccaaa tcgactgcca agaagcacaa ctcgatgcgc
    15901 tttacgtcca ccccctgttc cacaatctcg gactgggcac tgccctgctc cgtcaggcag
    15961 aaaccatcgc ccacaaatcc ggtttgagct ttctgaaact ctacgcatct ctcaactccg
    16021 tcccgtttta ccttctcaac cgctacgaat cgctcggttc ggcagtattg cagcttgacc
    16081 ccagcatcaa aatcaaatgc gaactgatgc gcaaacacct ctaatcccgc cttataacca
    16141 aaactgataa tcttcaaatc aaacattatt tccacaagcg cagacagccg tataaagttg
    16201 ccccatctac caaccgacag gacaagcata tgaaaaccta cgcacaggca ctctataccg
    16261 cagccctgct taccgcctgc agccccgcag ccgattcaaa ccatccgtcc ggacaaaatg
    16321 ccccggccaa taccgaatcc gacggaaaaa acattaccct gctcaatgcc tcatacgatg
    16381 tgacacggta tttttacaaa gaatacaacc acttatttat caaaacatac caatccgaac
    16441 accccggcac atccgtcagc atccaacaat cccacggcgg cttcagcaaa caggcattat
    16501 ccgtagccaa cggccttcaa gccgatgtcg taaccatgaa ccaatcttcc gacatcgacc
    16561 tgctcgaaaa aaaggactgg tagaaaaagg ctggcaacaa gccctccccg atcacgccgc
    16621 accctacacc agcactatgg ttttccttgt ccgaaaaaac aaccccaaac agatccgcga
    16681 ttggaacgac cttgccaaag acggcgctaa catcgtcatc gccaagacct cgggcaacgg
    16741 acgctacgcc ttcctcggcg catacggtta cggtctgaaa gccaacaacg gcaacgagca
    16801 ggaagcccaa aaactcgtcg catccatcct caaaaacaca cccgtttttg aaaacggcgg
    16861 acgcgccgcc gccaccacct tcacacaacg caacatcggc gacgtactca tcacttttga
    16921 aaacgaagcc aactacgtca gcaaaaaact gacccaagga cagtttgaaa tcgtctatcc
    16981 gagctacacc atttccgccg aaagccccgt tgccgtcgtc aacagcgtcg tcgcgaaaaa
    17041 aggcacgcaa aaaaccgccc gcgcctatct cgaatacctt tggagcgaac cggcgcaaga
    17101 actcgccgcc tcactctacc tgcgtccccg caaccccgaa gtattggcac gacacaaagc
    17161 cgacttcccc gacttagaca ccttccctcc cgaagaaaaa ttcggcggat gggacaacat
    17221 catgaaaacc tacttcgccg acggcggcgt attcgaccgc ctgaccgcac aaaaatgacc
    17281 attatgccgt ctgaaccgcc tttcagacgg catttcacac atcaaaacag aaaaccgcac
    17341 ccaaaatcat catcacaaga cacaacggca aaccggatac aaaacccaac accgccgcca
    17401 aaatgccgtc tgaagccgtc ggcgcaacca tccttatctg gggcgcgcct catcaaaggg
    17461 gcgcataact ttccttaacc atcccttttg acagccaaat aaacagtgct tttgcctgtc
    17521 agaaacaaaa ccaatatttt gcggttcgta tcggaacatt tataaaacat cagatttccg
    17581 tgtttcgcgt ttccggcaat tcaagattag caaaaccatt aacctgcttc gcaaggcagg
    17641 tttttaaaac tttatcaggc gttcgagcat atcggttcga ccgacccgca tttccggcaa
    17701 tcaacactgc cgacggttgc cgcatttctt tttgatatac aatcacactt tcaaaaaaca
    17761 tacgacggca acaaaatcat cctccccccg cttggcaaac attccggcaa attaaaaccc
    17821 cgcccgaaac agccatcgga caaataacag gaaaaaatat gaataccgac ttccaaaaga
    17881 tcctcaaaca actgggcaaa caggccaaaa aagaagcggc agaaaaacag gaagccgaaa
    17941 aaaacaagca aaaacaagaa caggatttgg atttttcaca agcagtcgga caagtctccc
    18001 cattaaaaaa ccggcagcaa tattatgcgc agtccgacaa aacccccatc aaagcccgtc
    18061 ccaaagacaa ccgcaccgac gaagaaaact acttctacat aggcagcaca tacaacgacc
    18121 cacccgccag cttctgcaaa aacggacagg gaaaaaacga catccaacgc ctgaaaaacg
    18181 gatactatac cgtcgttacc gatgtcgacc tgcacggcta cacccaagaa gaagcacaaa
    18241 aagtcctcaa cgaattcatc gcattcaccc aaaaacgcgg cgtatgcggc gaaatcatcc
    18301 acggcagcgg attaggttcc aaaggctaca aacccgttct gaaaaacatg acccgaaact
    18361 ggctgatgca acaccccgac gtactcgcct acgtcgaacc ccgggaaggc aacgacggct
    18421 gcgtccgcat cctgctcaaa cgcaaattaa ggcagcaaga ctgacaaatt tctccgacag
    18481 acttggcagc accgcacaat atccgtataa tttgcaaacc atttctgggg gcgaccttgg
    18541 tttcgacggg ggttgcgaag cagatgcggg cataccgggg tctcagattc ccgtaaaaca
    18601 ctgaattcaa atagtcgcaa acgacgaaac ttacgcttta gccgcttaag gctagccgtt
    18661 gcagcagtcg gtcaatgggc tgtgtggcga aagccaccgc aacgtcatct tacattgact
    18721 ggtttccagc cgggttactt ggcaggaaat aagacttaag gtaactggtt tccaaaaggc
    18781 ctgttggtcg gcatgatgga aataagattt tcaaatagac acaactaagt atgtagaacg
    18841 ctttgtagag gactttcgga cgggggttcg attccccccg cctccaccat gccctatttt
    18901 cagcagtatc ctgcaacaca aaaaatcctt gaacttcaaa agtttcaagg cttttttatt
    18961 gccttgaata tgatggcgta tgcttgagtt ttcgcaattt atggggtaac ttttggggta
    19021 acttttcagg aatcacccta aaaaatatct taaaaataca aaagccatca cgcatttttt
    19081 aaaaaggtta cccaaaactt aaatgaagcc tttatttata aggcttgcag ctttccaaac
    19141 aagttacccc caaacggata aaaaatgccg aag
//
LOCUS       DAXGCP010000037        18757 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.037, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000037 DAXGCP010000000
VERSION     DAXGCP010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18757)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18757)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18757
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.037"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..214)
                     /locus_tag="ACFJCW_001114"
     CDS             complement(<1..214)
                     /locus_tag="ACFJCW_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151277.1"
                     /translation="MNTKTELQKLLEEDISTLKETLIRVDALPPRYVRSIATPIVRRW
                     LIDKQLNILAKEIGLTIELPILDTSLV"
     gene            complement(276..2900)
                     /gene="alaS"
                     /locus_tag="ACFJCW_001115"
     CDS             complement(276..2900)
                     /gene="alaS"
                     /locus_tag="ACFJCW_001115"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HFC4151278.1"
                     /translation="MKTSELRQKFLKFFETKGHTVVRSSSLVPHDDPTLLFTNAGMNQ
                     FKDVFLGFDKRPYSRATTAQKCVRAGGKHNDLENVGYTARHHTFFEMMGNFSFGDYFK
                     RDAIHFAWEFLTSPEWLNIPKDKLLATVYAEDDEAYNIWLNEIGMPSERIVRIGDNKG
                     AKYASDNFWQMGDTGPCGPCSEIFYDHGKEIWGGIPGSPEEDGDRWIEIWNCVFMQFN
                     RDEQGNMNPLPKPSVDTGMGLERMAAVMQHVHSNYEIDLFQDLLKAVARETGAPFSME
                     EPSLKVIADHIRSCSFLIADGVLPSNEGRGYVLRRIIRRAVRHGYKLGQSKPFFHKLV
                     ADLVQEMGGAYPELKEKQAQIEEALKNEESRFAQTLETGMALLENALAKGGKTLGGEI
                     IFKLYDTYGFPYDLTADICRERNIEPDEAGFEREMEAQRARARAAQSFKANAQLPYDG
                     QDTEFKGYSERQTESKVLALYKDGGQVVELNEGDSGAVVIDFTPFYAESGGQVGDVGY
                     IFAGENRFEVRDTQKIKAAVFGQFGVQTSGRLKVGDSITAKVDDEIRNANMRNHSATH
                     LMHKALRDVLGGHVEQKGSLVTAESTRFDISHPQAVTAEEIAEVERRVNEAILANVAV
                     NAAIMSMEDAQKTDAMMLFGEKYGDEVRVLQMGGFSTELCGGTHVSRTGDIGLFKIIS
                     EGGIAAGVRRIEAITGLNALKWAQEQERLVKDIIAETKAQTEKDVLAKIQAGAAHAKA
                     LEKELARAKAELAVHAGAKLLDDAKDLGAAKLVAAQIEADAAALRETVTDLTGKSDNA
                     VILLAAVNEGKVSLCAGVSKALTGKVKAGDLVKFAAEQVGGKGGGRPDLAQAGGTDTD
                     KLPEMLASAEGWLCQKLS"
     gene            complement(2984..3115)
                     /locus_tag="ACFJCW_001116"
     CDS             complement(2984..3115)
                     /locus_tag="ACFJCW_001116"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151279.1"
                     /translation="MFDHYHSLHIGLEKAAIIADIGNRASDGIQNPAMPSESRRFHS"
     gene            3104..4234
                     /locus_tag="ACFJCW_001117"
     CDS             3104..4234
                     /locus_tag="ACFJCW_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4151280.1"
                     /translation="MVKHLPLAVLTALLLAACGGSDKPPAEKPAPAENRNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSMIPNYKHLNPEMMRLMDGVDPDHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFNPEYTFKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARDLMEDE
                     FKNDNTIFPSGEDLKNSFIMVPIRPAALKFMVRQWQDVKAGK"
     gene            complement(4275..5177)
                     /locus_tag="ACFJCW_001118"
     CDS             complement(4275..5177)
                     /locus_tag="ACFJCW_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC4151281.1"
                     /translation="MDTAKKDILGSGWMLVAAACFTVMNVLIKEASAKFALGSGELVF
                     WRMLFSTVTLGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLTTGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQEPAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSATGVAMSSVWATLTGWHTLSFPSAVYLSGI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPIAFKQRLQALFRQR"
     gene            5316..5813
                     /locus_tag="ACFJCW_001119"
     CDS             5316..5813
                     /locus_tag="ACFJCW_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane lipoprotein lipid attachment
                     site-containing protein"
                     /protein_id="HFC4151282.1"
                     /translation="MAGMKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAP
                     AKGFRLAPSHWADVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDS
                     MYEIYLRSAVDSQRGEINTEQSKLYIENALRGWQQRWKNMDAKPDNPAFTNFLMEVMK
                     MQPLK"
     gene            complement(5875..6780)
                     /gene="mtrA"
                     /locus_tag="ACFJCW_001120"
     CDS             complement(5875..6780)
                     /gene="mtrA"
                     /locus_tag="ACFJCW_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter MtrCDE transcriptional
                     activator MtrA"
                     /protein_id="HFC4151283.1"
                     /translation="MDILDKLVDLAQLTGSADVQCLLGGQWSVRHETLQCEGLVHIVT
                     AGSGYLCIDGETSPRPVGTGDIVFFPRGLGHVLSHDGKYGESLQPDIRQNGTFMVKQC
                     GNGLDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLTGTVS
                     VVNALPSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNIDKM
                     VAAANMSRAQLMRRFKSQVGLSPHAFVNHIRLQKGALLLKKTPDSVLEVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            6909..7244
                     /locus_tag="ACFJCW_001121"
     CDS             6909..7244
                     /locus_tag="ACFJCW_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC4151284.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            7375..7845
                     /locus_tag="ACFJCW_001122"
     CDS             7375..7845
                     /locus_tag="ACFJCW_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151285.1"
                     /translation="MKYHRLALFAAISCLLLSAVFIAPYLTAFHEQEKIFEYADLTVT
                     APNRSGRAIKLEADGRQYRLSCYGFDSLCTGGNIGRAIRARQVKIVLSETVGKGFLNG
                     VLLEYRNSGSVYSNKDFSRTEDRLVEVLAQPAVFSLKPGILLLLPAIFLRLKKM"
     gene            7951..8514
                     /gene="pgsA"
                     /locus_tag="ACFJCW_001123"
     CDS             7951..8514
                     /gene="pgsA"
                     /locus_tag="ACFJCW_001123"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HFC4151286.1"
                     /translation="MPWNIPIFLTWLRVLLIPVLIVLFYLPFSWFSEEAVNVAAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRSSVAVAAVGKFKTAAQMLAIFFLLLNFPDFYGFNLVVIG
                     NILMFIASLLTVWSMLYYLKMAWKEIA"
     gene            8595..8670
                     /locus_tag="ACFJCW_001124"
     tRNA            8595..8670
                     /locus_tag="ACFJCW_001124"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8628..8630,aa:Gly,seq:gcc)
     gene            8696..8771
                     /locus_tag="ACFJCW_001125"
     tRNA            8696..8771
                     /locus_tag="ACFJCW_001125"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8729..8731,aa:Gly,seq:gcc)
     gene            8797..8872
                     /locus_tag="ACFJCW_001126"
     tRNA            8797..8872
                     /locus_tag="ACFJCW_001126"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8830..8832,aa:Gly,seq:gcc)
     gene            8898..8971
                     /locus_tag="ACFJCW_001127"
     tRNA            8898..8971
                     /locus_tag="ACFJCW_001127"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8930..8932,aa:Cys,seq:gca)
     gene            9072..9161
                     /locus_tag="ACFJCW_001128"
     tRNA            9072..9161
                     /locus_tag="ACFJCW_001128"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9106..9108,aa:Leu,seq:taa)
     gene            9265..10317
                     /gene="sohB"
                     /locus_tag="ACFJCW_001129"
     CDS             9265..10317
                     /gene="sohB"
                     /locus_tag="ACFJCW_001129"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HFC4151287.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFETFFLSEEETKHQEKKEKKKEKAEAKAEKKRLKEGGEKSAETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLIRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIIGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPGLDIEKI
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKRSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(10368..11234)
                     /locus_tag="ACFJCW_001130"
     CDS             complement(10368..11234)
                     /locus_tag="ACFJCW_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HFC4151288.1"
                     /translation="MWKMLKHIAKTHRKRLIGTFSPVGLENLLMLGYPVFGGWAINAV
                     IAGRVWQALLYALVVFLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLNNSLERDNHFIRKGDERQLYRHYGLVSRLRVLISNREAFGYLCVG
                     AAMGILFGFAFVMMTLKGYGSAGHIYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQR
                     IEWSERNIKAGT"
     gene            complement(11245..11676)
                     /locus_tag="ACFJCW_001131"
     CDS             complement(11245..11676)
                     /locus_tag="ACFJCW_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HFC4151289.1"
                     /translation="MNRLDQLGIRINLICNVFDKWIGQQDLNYNLFTVLYTLATEGSR
                     TQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRERLLSLTEKGKVHAAPLTE
                     NAQEFSDKVFSTFGDKRTTRLFADLDALAEVMEKTISENKK"
     gene            complement(11911..12762)
                     /locus_tag="ACFJCW_001132"
     CDS             complement(11911..12762)
                     /locus_tag="ACFJCW_001132"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HFC4151290.1"
                     /translation="MSAETYTQIGWVGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGSTAELVRACPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTIGGSAMDSPMFQTKKSLW
                     ANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGEQDVSGV
                     YLKLAEH"
     gene            complement(12838..13749)
                     /gene="hisB"
                     /locus_tag="ACFJCW_001133"
     CDS             complement(12838..13749)
                     /gene="hisB"
                     /locus_tag="ACFJCW_001133"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HFC4151291.1"
                     /translation="MTKTQLHLNNFLTLAQEAGSLPKLAKLCGYRTPVALYKLKQRLE
                     KQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETRIAETA
                     SAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDIDIS
                     CKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLSGR
                     PGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFKAF
                     GRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            complement(13766..14845)
                     /gene="hisC"
                     /locus_tag="ACFJCW_001134"
     CDS             complement(13766..14845)
                     /gene="hisC"
                     /locus_tag="ACFJCW_001134"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HFC4151292.1"
                     /translation="MKSVRSFIRNDILAMSAYKITDVPPGFAKLDAMESPAHPFEGHE
                     ALMREWRAQLASAPIHLYPNPSGCGLQEALRSAFDIPDCAAVALGNGSDELIQFITML
                     TAKPGAAMLAAEPGFIMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAAIEASDGIVVVDEAYGAFNGDSFLPQAGRIPNLIVLRTL
                     SKIGFAGLRIGYATGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNAFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITIGSSAQNDAVLDVIRRLYR"
     gene            complement(14891..16180)
                     /gene="hisD"
                     /locus_tag="ACFJCW_001135"
     CDS             complement(14891..16180)
                     /gene="hisD"
                     /locus_tag="ACFJCW_001135"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HFC4151293.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAIAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILVKDLNEACEISNYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            complement(16177..17064)
                     /locus_tag="ACFJCW_001136"
     CDS             complement(16177..17064)
                     /locus_tag="ACFJCW_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HFC4151294.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLSEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMTEETKNGRKQTRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGGKAYIRPKTE
                     QETLQTIPSPKITKENPKS"
     gene            complement(17156..17821)
                     /gene="hisG"
                     /locus_tag="ACFJCW_001137"
     CDS             complement(17156..17821)
                     /gene="hisG"
                     /locus_tag="ACFJCW_001137"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HFC4151295.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIAPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSYLVVNKAALKTKYALLKPIIQSFGGAVKAKW
                     AFI"
     gene            complement(17900..18553)
                     /locus_tag="ACFJCW_001138"
     CDS             complement(17900..18553)
                     /locus_tag="ACFJCW_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HFC4151296.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASAPAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTGLLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGGQNLPVIK
                     QQYRVVSAKINQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
BASE COUNT         4214 a         4575 c         5229 g         4739 t
ORIGIN      
        1 ataccaaact tgtatcaagg atgggcaatt ctatagttaa acctatttct tttgcgagaa
       61 tatttaattg tttgtcaatt aaccatcgac ggacaatagg agttgcaatg ctacgtacat
      121 atcttggagg aagagcatct acacgaatta gtgtttcttt taaagttgat atatcctctt
      181 ctaaaagttt ttgtaactct gttttagtat tcattctaac aatccaaaat ataagccatt
      241 tgaacaagac tcaaatggct tattaagatt taaatttaac ttaatttctg acaaagccaa
      301 ccttccgcgc ttgccagcat ttcgggcaat ttgtcggtat ccgtaccgcc ggcttgcgcc
      361 aagtcgggac ggccgccgcc tttgccgccg acttgttcgg ctgcaaattt aaccagatct
      421 cctgctttga cttttccggt cagggctttg gatacgccgg cgcacaggga gactttaccc
      481 tcgtttactg ccgctaaaag aatcacggcg ttgtcggatt ttccggtcag gtcggttacg
      541 gtttcgcgca gggcggctgc gtcggcttcg atttgtgcgg caacgagttt ggccgcgccc
      601 aggtcttttg cgtcgtccaa gagtttggcg cctgcgtgga cggcgagttc ggctttggcg
      661 cgtgccaatt ctttttccaa tgctttggcg tgtgccgcgc ctgcttggat tttcgccagt
      721 acgtcttttt cggtttgggc tttggtttcg gcaatgatgt cttttaccaa acgctcttgc
      781 tcttgcgccc atttgagtgc gttcaggccg gtgatggctt cgatacggcg tacgcctgcg
      841 gcaataccgc cttcgctgat gattttgaag aggccgatgt cgccggtgcg tgaaacgtgt
      901 gtgccgccgc acaattcggt agagaaaccg cccatttgca gtacgcgtac ttcgtcgccg
      961 tatttttcgc cgaagagcat catggcgtcg gttttttgcg cgtcttccat gctcataatg
     1021 gctgcgttga cggcaacgtt ggccaagatg gcttcgttga ctcggcgttc tacttcggcg
     1081 atttcttcgg cagttaccgc ttggggatgg gaaatgtcga aacgggtgga ttcggcggta
     1141 accaaagagc ctttttgttc gacgtgtccg cccaatacgt cgcgcagggc tttgtgcatc
     1201 aggtgggtcg cgctgtggtt gcgcatattg gcattgcgga tttcgtcatc cactttggcg
     1261 gtaatgctgt cgccgacttt cagacggcct gaagtttgta cgccgaattg tccgaatacg
     1321 gccgctttga ttttttgggt atcgcgtact tcaaagcggt tttcgcctgc gaagatatag
     1381 ccgacgtcgc cgacttggcc gccggattct gcatagaacg gggtaaagtc gataacgacg
     1441 gcaccgctgt cgccttcgtt caattcgacg acttgcccgc cgtctttgta gagggcgagg
     1501 actttggatt cggtttggcg ttcgctataa cctttaaact cggtgtcttg accgtcgtaa
     1561 ggcagttggg cgttggcttt gaagctttgg gcggcgcgtg cgcgtgcgcg ttgggcttcc
     1621 atttcgcgct cgaagcctgc ttcgtccggt tcgatattgc gttcgcggca gatgtcggca
     1681 gtcaggtcgt atgggaagcc gtaggtatcg tagagtttga agataatttc gccgccgagt
     1741 gttttgccgc ctttggccag cgcgttttcc aacaaagcca taccggtttc cagagtttgg
     1801 gcaaaacggc tttcttcgtt tttcaaagct tcttcgattt gcgcctgttt ttctttcaat
     1861 tcaggatacg cgccgcccat ctcttgaacc aaatcggcaa cgagtttgtg gaagaacggt
     1921 ttgctttgac ccagtttgta accgtggcgc acggcgcggc ggatgatgcg gcgcaatacg
     1981 tagccgcgtc cttcgttgga aggcaatacg ccgtctgcaa tcaggaatga gcaggagcgg
     2041 atgtggtcgg cgataacttt caggctgggt tcttccatac tgaacggcgc gccggtttcg
     2101 cgggcaacgg ctttgagcag gtcttggaac aggtcgattt cgtagttgct gtggacgtgc
     2161 tgcatcacgg cggccatacg ttccaagccc ataccggtat cgacggacgg cttgggcagc
     2221 ggattcatat tgccttgttc gtcgcggttg aactgcatga atacgcagtt ccaaatttca
     2281 atccagcggt cgccgtcttc ttcggggctg ccgggaatgc cgccccagat ttctttgccg
     2341 tggtcgtaga aaatttcgga gcaggggccg caagggccgg tgtcgcccat ttgccagaag
     2401 ttgtcggacg cgtatttcgc gcctttgttg tcgccgatgc ggacgatgcg ttcagacggc
     2461 ataccgattt cgttcaacca gatgttgtag gcttcgtcgt cttctgcgta aacggtcgcc
     2521 aagagtttgt ctttggggat gttgagccat tcgggggaag tgagaaactc ccaagcgaag
     2581 tggatcgcgt cgcgtttgaa gtaatcgccg aaggagaagt tgcccatcat ttcaaagaag
     2641 gtgtggtggc gggcggtgta gccgacgttt tccaagtcgt tgtgcttgcc gcctgcgcgt
     2701 acgcattttt gcgcggtggt ggcgcggctg tacgggcgtt tgtcgaaacc taaaaatacg
     2761 tctttaaact ggttcatgcc tgcgttggta aacagcaggg tcgggtcgtc gtgcggcacg
     2821 aggctggaag agcggacgac ggtgtggcct ttggtttcaa aaaattttag gaatttttgg
     2881 cgcagttcgg aggttttcat aattttttca atgtctctca aatgtcttgt catggtaaaa
     2941 gcagggaaaa cgaacggcgg tatattaccg caaatccctg tttctagcta tggaagcggc
     3001 ggctttcaga cggcattgcg ggattttgaa tgccgtctga agccctgtta ccaatatcgg
     3061 ctataatggc cgctttctcc aacccgatat gcaaggaatg ataatggtca aacatctgcc
     3121 actcgccgtc ctgactgctt tgctgcttgc agcgtgcggc ggttcggaca aaccgcctgc
     3181 cgaaaaaccg gcaccggcgg aaaaccgaaa cgtattgaaa atttataact ggtcggaata
     3241 cgtcgatccg gaaaccgttg ccgattttga aaagaaaaac ggcatcaagg ttacttatga
     3301 tgtgtacgac agtgatgaaa cgctggaaag caaggtgctg accggaaaat ccggttacga
     3361 cattgtcgcg ccgtccaatg cgtttgtggg caggcagatt aaggcaggtg cgtatcagaa
     3421 aatcgataag tcgatgattc ccaattataa acatctcaac cctgaaatga tgaggctgat
     3481 ggacggggtc gatcccgacc acgaatacgc cgtgccgttt tattggggga caaatacctt
     3541 cgccatcaat accgaacgtg tgaaaaaggc tttgggtacg gacaagctgc cggacaacca
     3601 gtgggatttg gtgttcaacc ccgaatacac gttcaaactc aaacaatgcg gcatcagcta
     3661 tttggacagc gcggcggaaa tttatcccat ggtgttgaac tatttgggca aaaacccgaa
     3721 cagcagcaat acggaagaca tcagggaggc aaccgccctg ctcaagaaaa accgccccaa
     3781 tatcaaacgc tttacttcgt ccggctttat cgatgatttg gcgcgcggcg atacctgcgt
     3841 aacaatcggt ttcggcggag atttgaacat cgccaaacgc cgtgccgaag aagcgggcgg
     3901 caaggaaaaa atccgcgtga tgatgccgaa agagggcgtg gggatttggg tggattcttt
     3961 cgtgattccg aaagatgcga aaaacgtcgc caacgcgcac aaatacatca acgacttcct
     4021 cgatccggaa gtgtcggcga aaaacggcaa tttcgttacc tacgcgcctt cgagcaagcc
     4081 ggcgcgcgat ttgatggagg acgaatttaa aaacgacaat acgattttcc cgagcgggga
     4141 agatttgaaa aacagcttta tcatggtgcc tatccggccg gcggcattga agtttatggt
     4201 gcgccagtgg caggatgtga aggcggggaa ataaagcccg atatgccgtc tgaaggatgt
     4261 tcggacggca ttttttatct ttggcggaag agggcttgca gccgctgttt gaaggcaatg
     4321 gggcggatgc tgctcaaaat gccgctgagg ataatgatgc acataccgag tatttcctgc
     4381 cagaaaagct cttcgcccag aaaaaatgcg gcagacaggg cggaaaagac gacggtcata
     4441 taggaaagcg aggcaaccgt gaatttgtcg ccgactttgt aggcgcgcgt catcgacagt
     4501 tgggcaatca gcgcggacac gccgatgccc gacagataaa ccgccgatgg aaaggacagg
     4561 gtgtgccagc cggtcagcgt cgcccaaacc gacgacatcg ccacgccggt tgcggaaagg
     4621 taaaacacga cgcgccagcc gggttcgccc gccaaagaca gttcgcgcac tttcaaatac
     4681 gcccagccgg acatcgcgcc gcccgccagc ccggcgagtg ccgccggttc ctgaccgctg
     4741 cggaacgagg gattaagcag caataccacg ccggcaaaac caaggagcag caccgcctgc
     4801 gtgtaaacgg aaatccgttc tttcaaaatc aggaaggaaa ataccgccaa aaaaatcgac
     4861 gaggtgtaac tcagggtaac gccggttgtc aaaggcagat gcgttaccgc gtaaaacagc
     4921 agcagcatcg cccccgtccc gaccatactg cggtttaagt ggtttttcca atggggcgtg
     4981 cggaaggtgt cgcgccgcaa tacggcggca gcaccgagcg taacggttga aaacagcatg
     5041 cgccaaaaga ccaattcgcc gctgccgagg gcaaattttg ccgatgcctc tttaatcaat
     5101 acgttcataa cggtgaagca ggccgccgcc accagcatcc agcccgatcc taaaatgtct
     5161 ttttttgcgg tatccataaa cggtcgttgc gataaggacg gtcggattgt aaaccttgcg
     5221 gcaaggcttg tggaatgtgt ttttgcctgc ttctgatgcc gaaattttat ttttcttgcc
     5281 gaacaatttg ttttctcaag gcaaacttga ttataatggc gggtatgaaa aaatacctta
     5341 tccctctttc cattgcggca gtcctttccg gctgccagtc tatttatgtg cccacattga
     5401 cggaaatccc cgtgaatcct atcaataccg tcaaaacgga agcacctgca aaaggttttc
     5461 gcctcgcccc ttcgcattgg gcggatgttg ccaaaatcag cgatgaagcg acgcgcttgg
     5521 gctatcaggt gggtatcggt aaaatgacca aggttcaggc ggcgcaatat ctgaacaact
     5581 tcagaaaacg cctggtcgga cgcaatgccg tcgatgacag tatgtatgaa atctacctgc
     5641 gttcggcggt agacagccag cgcggcgaaa tcaatacgga acagtccaag ctgtatatcg
     5701 agaatgcctt gcgcggctgg cagcagcgtt ggaaaaatat ggatgccaaa cccgataatc
     5761 ccgcatttac caactttttg atggaagtga tgaagatgca gcccttgaaa tgacgcggta
     5821 cgcaaatgcc gtctgaaagc tttttcagac ggcatttgcg tttgaagccc cgatttattt
     5881 ttgcccgcct tctttccggt attgccccgg cgaaacgtga tattgccgtt tgaacgcctt
     5941 gccgaaatgc gtttccgact gaaagcccac cgacagcgcg acctccaaaa ccgaatccgg
     6001 ggttttcttc agcagcaatg cgcctttttg caggcggata tggttcacaa aggcgtgcgg
     6061 gctgagtccg acttggcttt tgaagcggcg catcagttgc gcgcgcgaca tattggcggc
     6121 ggcaaccatt ttgtcaatat tccattcgtc ttccggtttg tctatcacct tttggatcaa
     6181 atgtcccaaa cgtttgtcct gccaaccttt caatacgccc gagagttcga catccttatc
     6241 ctgttcgaga taggcgcgca ggataagcac cagcaggacg gacggtaatg cgttgaccac
     6301 ggaaaccgtc cccgtcaaag gtttttcgct ttccagttgc agcattgaaa ccacatactg
     6361 caaacttgga tgggcaatgt tcagaaaaac ggtttccggc agcccgttca tcaaatcggc
     6421 gtgggtgtcg tagcggaaac gggcgcaaaa caggctcata tccagcccgt tgccgcactg
     6481 tttgaccata aatgtgccgt tttgtcgtat gtccggttgt aaactttctc cgtattttcc
     6541 gtcgtggctc aacacatgac ccaagccgcg cgggaaaaat acaatatcgc ccgtgccgac
     6601 cggacgcggg gaagtttcgc cgtcgatgca gagataaccg ctgcccgccg taacaatgtg
     6661 taccagccct tcgcattgca aggtttcatg ccgtaccgac cattgtccgc ccaaaaggca
     6721 ctgcacatcc gcactgcccg tcaattgggc gagatcgacc agtttgtcca gaatgtccat
     6781 aaatcttttt gaaccataaa atgagatgat taaacgagaa acacaactga ataattgcaa
     6841 taatacgcac atcaaaaaca gatacgcaag cgcgtatcag ggttaaacgc aagagaaagg
     6901 aaaagaaaat gtttaaagat tggaaagaac ataccgcatt ggttaaaaaa tcattcggcg
     6961 agctgggtaa ggcgcatcct aaaatgctgc aagcctacgg cgcattggaa caggccgccg
     7021 ccgccgaagc actcgatgcc aaaacgcgcg aactgattgc catcgccgtt gccatcacca
     7081 cccgttgcga gagctgcatc agcgttcacg ccgccgccgc cgccaaagcc ggtgcgaccg
     7141 acagcgagat cgcaggtgca ttggcaaccg ccattgccct gaatgcgggt gctgcttaca
     7201 cttacgccct gcgtgcattg gaagcggttg aaacgcaaaa ataatccgtt tcggataaga
     7261 aatgccgtct gaaaatattt cagacggcat tttgcctgtt atgcttcccg atattttgca
     7321 gacaacatat gcagccgttt ttttcagacg gcatttgaga aacatggaac aagtatgaaa
     7381 tatcaccgct tggcattgtt tgccgccata agctgcctgt tgttgtccgc cgtttttatt
     7441 gcaccttacc tgacggcatt tcacgaacaa gaaaaaatat ttgaatatgc ggatttgacc
     7501 gttaccgccc ccaaccgcag cggacgggca atcaaattgg aggcggacgg gcggcagtac
     7561 cggctttcct gctacgggtt cgacagtttg tgcacaggcg gcaatatcgg cagagccatc
     7621 agggcgcggc aggttaagat tgttttaagc gaaaccgtcg gcaaaggttt tttaaacggc
     7681 gttctgttgg aataccgcaa cagtggcagt gtctatagca ataaagattt ttcccgcacg
     7741 gaagaccgcc ttgtcgaagt gttggcacaa cctgccgttt tcagcctgaa accgggtatt
     7801 ttgcttttat tgcccgccat tttcctgcgt ttgaaaaaaa tgtgaaaaca gattggcggg
     7861 gcgggggaat gactatgcgg caattttacg ttttgggtta tgaggataac cgttataatc
     7921 ataattttac agtccgcaca gagaaaaccg atgccttgga acatccccat cttcctcaca
     7981 tggttgaggg tcttgctcat tcccgtactg attgtccttt tctacctgcc gttctcatgg
     8041 ttttcagaag aagcagtcaa tgttgccgcc gccgtcattt ttgccgttgc cgccttgacc
     8101 gactggtttg acggattttt ggcaaggttg tggaaacaga cttccgattt cggcgcattc
     8161 ctcgaccccg tcgccgacaa gctgatggtt gccgtatcgc tgctgctgct ggtcaaactc
     8221 gaccggacct atgttttgtt cgcgatgatt atcatcggca gggaaattac catttccgca
     8281 ttgcgcgaat ggatggcgca aatgggaaaa aggagcagcg ttgccgtcgc cgccgtcggc
     8341 aagttcaaaa ccgccgcgca aatgctggcg attttctttt tgctgctgaa ttttcccgat
     8401 ttttacggat ttaatcttgt tgttatcggc aacatattga tgtttatcgc atctttgctg
     8461 acagtctggt cgatgctgta ttatctgaaa atggcgtgga aagaaattgc ctgaaaaaaa
     8521 cataaaaaca gcttgacggt aaaaacataa tccataataa ttgcgtcttc ttcgatgtcg
     8581 gagagtgaaa tcgggcggga atagctcagt tggtagagcg caaccttgcc aaggttgagg
     8641 tcgcgagttc gagactcgtt tcccgctcca aaaatttcat tcttccgtaa tcattgcggg
     8701 aatagctcag ttggtagagc gcaaccttgc caaggttgag gtcgcgagtt cgaggctcgt
     8761 ttcccgctcc aaaaatttca ttcttccgta atcattgcgg gaatagctca gttggtagag
     8821 cgcaaccttg ccaaggttga ggtcgcgagt tcgagactcg tttcccgctc caagttttgt
     8881 agacaagcca gttttagggc gagatagcaa agtggttatg cagcggattg caaatccgtc
     8941 tacgccggtt cgattccgac tctcgcctcc atatatctta cggcggggtg gcagagtgtt
     9001 tatgctatga ggggtgcaac cttcatatag gccggttaaa atccgcgccc ccgcctccac
     9061 ctttcacaaa tgcccgggtg gtgaaatagg tagacacaac ggacttaaaa tccgtcggga
     9121 ctaaacatcc catgccggtt cgattccggc tccgggcacc aagctgaaaa tgacaatgcc
     9181 gctccaagcg gttatttttt tatctgtcgg atggggatgg acaatattga tatgttcatg
     9241 cctgaacaag aggaaatcca atcaatgtgg aaagaaattt tactgaatta cggtattttc
     9301 ctgctcgaac tgcttaccgt gttcggcgca attgcgctga ttgtgttggc tatcgtacag
     9361 agtaagaaac agtcggaaag cggcagtgtc gtactgacag atttttcgga aaattataaa
     9421 aaacagcggc aatcgtttga aacattcttt ttaagcgagg aagagacaaa acatcaggaa
     9481 aaaaaagaaa agaaaaagga aaaggcggaa gccaaagcag agaaaaagcg tttgaaggag
     9541 ggcggggaga aatctgccga aacgcaaaaa tcccgccttt ttgtgttgga ttttgacggc
     9601 gatttgtatg cacacgccgt agaatccttg cgtcatgaga ttacggcggt gcttttgatt
     9661 gccaagcctg aagatgaggt tctgatcaga ttggaaagtc cgggcggcgt ggttcacggt
     9721 tacggtttgg cggcttcgca gcttaggcgt ttgcgcgaac gcaatattcc gctgaccgtc
     9781 gccgtcgata aggtcgcggc aagcggcggc tatatgatgg cgtgtgtggc ggataaaatt
     9841 gtttccgctc cgtttgcgat tatcggttcg gtgggtgtgg tggcggaagt gccgaatatc
     9901 caccgcctgt tgaaaaaaca tgatattgat gtggatgtga tgacggcggg cgaatttaag
     9961 cgcacggtta cttttatggg tgaaaatacg gaaaagggca aacagaaatt ccggcaggaa
    10021 ctggaggaaa cgcatcagtt gttcaagcag tttgtcagtg aaaaccgccc cgggttggat
    10081 attgaaaaaa tagcgacggg cgagcattgg ttcggccggc aggcgttggc gttgaacttg
    10141 attgacgaga tttcgaccag tgatgatttg ttgttgaaag cgtttgaaaa caaacaggtt
    10201 atcgaagtga aatatcagga gaagcgaagc ctgatccagc gcattggttt gcaggcggaa
    10261 gcttccgttg aaaagttgtt tgccaaactt gtcaaccggc gagcggatgt gatgtagttt
    10321 gccgaacgga tggaaatgcc gtctgaagtg tgttcagacg gcatttttca agttccggct
    10381 ttgatgttcc gttccgacca ctctatccgt tgtccgatgt ctttcaaatt ggaatattgt
    10441 tcgaccaatc gcggcacatc gtccaaactc atggcaaaca tccacagata agtgccgacc
    10501 gaataaatat gccccgcgct gccgtagcct ttgagcgtca tcatcacaaa agcaaagccg
    10561 aacaaaatac ccatcgccgc gccgacgcag agatagccga aggcttcgcg gttggaaatc
    10621 agcacacgca ggcgcgaaac cagtccgtaa tggcggtaca gctgccgctc gtcgcctttt
    10681 cggataaagt ggttgtcgcg ttccaagctg ttgttcaggc ggaaatacag gttttcgctg
    10741 atggcggcaa aacgtggcaa aagccataaa aacaacgcaa gtatgcccac cgccgacacg
    10801 ccgacccaaa attccagcac cagcagcatg atgcacgcgc cgaatatgga tacgacggat
    10861 gtcgcggcaa tcggcaggtg ttcttcaaaa aagctgacaa attcacgcga cagggcaacc
    10921 cgtgcagtta ccgctgaatg cgggacttgc cgctgccgtt gttccaacac aaccggcacg
    10981 gcgatttcgg tataaatccg cgtaaacgtg cgcgtatcgg caatccgccg tgccgcaccg
    11041 accagccaca tcaaaaatac aaccaaagcg tacagcaacg cctgccacac cctccccgca
    11101 atcacggcat taatcgccca gccgccaaac accggatacc ccagcatcaa aaggttttcc
    11161 agtccgaccg gggaaaatgt gccaatcaat cgcttgcggt gggttttggc tatgtgtttc
    11221 aacattttcc acatatttgt ccctctattt tttattttcc gagattgttt tttccatcac
    11281 ttccgccagt gcatccaaat cggcaaacag ccgggttgtg cgcttgtcgc cgaatgtgga
    11341 aaatactttg tcgctgaatt cctgcgcgtt ttctgttaaa ggtgcggcat ggactttgcc
    11401 tttttcggtc agcgacagca accgttcgcg cctgtcctgt tcgccttcct gccattcaat
    11461 caacccttgt ccggcaaggg ttttgcatac gcctgaaacg gtctgtttgg gcagactcca
    11521 ctcttctccg atgtgctttt gcgtgcggct gccttcggtt gccagggtat aaagtacggt
    11581 aaagaggttg taattcaaat cctgctgccc gatccatttg tcaaagacat tgcaaatcag
    11641 gttgatacgg attccaagtt ggtcgagtcg gttcataatt ggtcttgata ttgactaaat
    11701 ttgtgcggat tatagtggat taacaaaaac cggtacggcg ttgcctcgcc ttgtcgtact
    11761 atttgtactg tctgcggctt cgccgccttg tcctgatttt tgttaatcca ctatatagtc
    11821 ataatcggga ctgatttcaa gcgtggggcg ataaaaatgc cgtctgaaac gctttctggc
    11881 ttcagacggc atattgtttg gaaagggaag tcagtgttct gccaatttca ggtaaacgcc
    11941 ggaaacgtcc tgttcgccgt agccggcttc aactgctttg cggtagctgg cagcaacggt
    12001 ttcgacggcg ggcagggtgt tgcctgcctg ttcaagctct ttgacggcga ggttaaggtc
    12061 tttggaagcg tgtttgagtg caaaggcagg ggggaactca cggtttgccc atagtgattt
    12121 ttttgtttga aacataggcg agtccattgc cgagccgccg atggtatcga tgccgaactg
    12181 ccgcgccatc agcatcgctt cgctgtacgc ttcgccgaaa atgcctaaga gcgagttcaa
    12241 gacgagtttc gcgcccgagc ctttgccgac atcgccgaaa tggaaggttt ttttgccgac
    12301 aagggaaaat attttttgca gcgggtttaa aacggcttcg ctgccgccga acagaatcag
    12361 cagtgtgccg ttggtggcgg gtccgaccga tccggaaacg ggtgcttcgg caaactgtcc
    12421 gcctgcggct tcgacaagtg ctttgacggc gaggttttcg gtcggggaga tggtgctcat
    12481 gttgacgatg attttgccgg ccaatccgtc gcggactccg ttcaggatgt cgcacacggc
    12541 ggcatagtcg gaaaccatca ggaaaatgac ggggcaggcg cggacgagtt cggcggtgct
    12601 gccgtaaact tttgctcctt tggcggagat gggggcagtt ttgtcgggcg agcggttgta
    12661 tacgccgact tcgatgccgc cgtccaagag ccgcgttacc ataggcagac ccatttgccc
    12721 taagcctacc cagccgattt gtgtgtatgt ttctgcggac atagtgtttc tcctttgttg
    12781 gggcgctgtg atgccgtctg aaggcttcct gcgcttcaga cggtctgttt ggggatgtta
    12841 tgcggtcagc gtgcctttgg tcgagggggt ttgcccagcc attctcgggt cgtgttcgac
    12901 tgccatacgc agggcgcgcc cgaaggcttt gaatacggtt tccgcctgat ggtgggcgtt
    12961 tttgccgctg aggttgtcga tgtgcagggt catcatgctg tggttgacga tgccgtggaa
    13021 aaattcttca aacaaatcga catcgaaacg tccgattagt gcgcgggtaa attcgatgtt
    13081 gtacacgagt ccggggcggc cggaaaggtc gatgacgacg cggctgaggg cttcgtcgag
    13141 cgggacgtag gaatgtccgt aacggcggat gccttttttg tcgccgagtg cctgccggat
    13201 tgcttgtccg agtgtgatgc cgatgtcttc ggcggtgtgg tggtcgtcga tgtgcaggtc
    13261 gcctttgcag ctgatgtcga tgtcaatcat gccgtggcgg gcgatttggt cgatcatgtg
    13321 ttcgaggaag ggaacgccgg tatccagcct gcttttgccg ctgccgtcga ggttgatgga
    13381 gacggtgatt tgggtttcgc aggtattgcg gttgacggta acgctgcggc agccggcagc
    13441 agatgcggtt tcggcaattc gggtttcggc agttccggtg ctttctgcgg cggtttcggg
    13501 gacagtgcgt tcgcggtgtt ttctgtcgag ccagcctttg ggtttgccgg tgtgtttttc
    13561 gagttttgcc atcaggctgg gacggatgcc gcgcgcatcg gggtcttctg cctgcttttc
    13621 aaggcgttgt ttgagtttgt aaagtgcgac gggggtacgg tagccgcaga gtttggcaag
    13681 cttgggcagc gaacctgctt cttgggcgag agtcaggaag ttgttcaggt ggagttgtgt
    13741 cttggtcata gggattccgt ttggtttatc ggtagagccg gcggataacg tcgaggacgg
    13801 catcgttttg tgcggagctg cctatggtaa tgcgcaggca gtgttccaaa agcggatgtg
    13861 cgccgtgcag ttttttgacg aggatgcggt tttgtttgag tgtgtcaaac aacaaatcgg
    13921 catcgggtac gcgtatggta atgaagtttg cctgacttgg aaaggcgttc agacggcata
    13981 ttttgcccaa ttcggcgaac atccgttcgc gttcgttttt caggctgtcg atgttggcag
    14041 aaatgatgcc gtagtgttgc agggcgagtt tggcggtggt caggctcagt tggttcatat
    14101 tgtagggcgg caggattttt tgcagttcgc cgatgacttc gggacagcct gtcgcataac
    14161 cgatacgcag tccggcaaaa ccgattttgc tgagggtgcg taagactatc aggttgggaa
    14221 tcctgcccgc ctgcggcagg aagctgtcgc cgttgaatgc gccgtaggct tcgtcgacga
    14281 cgacgatgcc gtctgaagct tcgatggcgg cttcgatttc ggcacgcgtg aaacatacgc
    14341 cggtcgggtt gttcgggtag gcgataaagg tcagggcagg gcggtgcttc ctgacggctt
    14401 cgaggacggc gggcaggttg agggtgaaat ctccgttcag tggaacgccg acataatcca
    14461 tgccgtacag cgcggcgttg tggcggtaca tgatgaaacc gggttcggct gccaacattg
    14521 ccgcgccggg tttggcggtc agcatggtga tgaactgtat cagttcgtcc gaaccgttgc
    14581 ctaaggcgac ggcggcgcag tcagggatgt cgaacgccga acgcaatgct tcctgcaaac
    14641 cgcagccgga ggggttggga tagaggtgga tgggggcgga tgccagttgc gcccgccatt
    14701 cccgcatcag ggcttcgtgc ccctcaaaag gatgggcggg gctttccatc gcatcgagtt
    14761 tggcaaaacc gggcggaaca tcggtgattt tgtatgcgga catggcgagg atgtcgttgc
    14821 ggatgaagga gcggacggat ttcatcgtgt ttccttaatg gttggaatat gcctgtacgc
    14881 cgtttcggca ttatttcata cggaactctg ccgcgcgtgc gtgggcggtc aggctttcgc
    14941 cgtgtgccag cacgctggcg gtttcgccta atttttgcgc gccctgttcc gaaacctgaa
    15001 tcaggctgga gcgtttttgg aaatcatatg tccccaaagg cgaggaaaag cgggcggttc
    15061 ggctggtggg caacacatgg ttcgggccgg cgcagtagtc gccgaggctt tcgccggtgt
    15121 agcgtcccat gaaaatcgcg ccggcatggc ggattttttt cgcccattcc tgcgggtttt
    15181 cgactgacag ttccaagtgt tcgggggaaa tgtagttgga gatttcgcag gcttcgttca
    15241 agtctttaac gagtatcatc gcgcccctgt tgccgagcga ggcctcgatg atgtcgcggc
    15301 gcggcatggt ttcgatgagc ctgtccatag cggcttctac ttcgtcgaga tacgcttgcg
    15361 acgtgccgat gaggatggct tgggcaattt cgtcgtgttc ggcctggctg aacaaatcca
    15421 tcgccaccca atcggcgggt gtcgtgccgt cggcgatgac cagtatttca gacggccccg
    15481 ccaccatgtc gatgccgacc acgccgaaca cgcggcgttt ggcggcggcg acgaaggcgt
    15541 tgcccggacc ggtgatttta tcgacttggg ggatggtttc cgtgccgtag gcgagggcgg
    15601 cgatggcttg cgcgccgccg acggtgaaga ctttggttac gccggcgacg tatgcggcgg
    15661 caagcacgat gtcgttgcgt tcgcctttcg gtgtcggtac gaccataatg atttctttca
    15721 cgcctgcgac gtgggcgggc atcgcgttca tgatgacgga actcggatat gccgccttgc
    15781 cgcctgggac gtaaatgccg acgcggtcaa gcggggtaat ctgttgcccc agcagcgtgc
    15841 cgtcttcatc ggtgtagctc cacgattcca ttttttggcg ttggtggtag ctttcgacac
    15901 ggcgggcggc ggtctgcaat gctgtctgaa cgtcgttcgg aatgcgctcg aacgccgcgt
    15961 tcaaatcggc ttgcgtgagt attaaatcat cgatgctttt agcgtttgtc tgatcgaatt
    16021 tgttggtgta ttcaatcaaa gccgcatcgc cgcgcttttg cacgtcggcg caaatgtcgg
    16081 cgacgatgcg ttcggtttcg gggttttgcg cggtttcaaa agccagcagg gctttgagtc
    16141 cggcttggaa atcgggcgat tgggtgttga gttttttcat gatttgggat tctcctttgt
    16201 tattttggga cttgggatcg tctgaagcgt ctcttgctcg gttttgggtc tgatatacgc
    16261 ttttcctccc ccgctaccaa acttcaattc gggcaggcat ttttgttgca gaccgagttt
    16321 ggctaatacc tcttcgctac gagaggtagt acggaaacgg taacgggttt gttttctgcc
    16381 gtttttggtt tcctcagtca ttgtttcaaa accgtccact tcgtacgcac tgacaacagc
    16441 gttttgcaga ccggtgtgaa cgccgataac gtatttcact tttgaagcaa catctttacc
    16501 gataacccag ttgcccaacg tacgcgattt gaggttggca tcgtcttggt tgtcgaaaag
    16561 gtagtctaat tcttcgtcag tatctaaatc gaaagcattg tggatcttga tggcgagaat
    16621 cagcccgtcg gggttaatct cgctaagtgg gagagaagag aatccaaagc ggcgatctag
    16681 ttcttctacg ctaataccac ccggaccatg cccggcaatt ttatttttga gttttttacc
    16741 caagacagat ttaacaaaat gaattaaggc agattcggcg gcgagcgctt cgacttcagt
    16801 cagatgatag ctgatgatat agcgaccgag tttcttgcat ttggagatgg ctttgagttt
    16861 ccgatcgata atctcgccgg agactgggtc ttgtgaacga ctagcaaccc attcatgctc
    16921 gaagatacga ttaccgcaac cttttccgat gtagaggatt ttgtcttttt tcaggtcggt
    16981 cagacaatag acataaaacc gacgctcgcc gttattcaaa acggaaaggg tcgaatctga
    17041 gaattttttt atttttgcaa ccattttaac ttctcctata cagtttactg ccggtgatat
    17101 tttcagacgg cctgtcggcg ggaacggata gggtcgtctg aaaacgcatc tttattcaaa
    17161 tgaatgccca cttcgccttc actgcgccgc cgaacgactg aataatcggc ttcagcagcg
    17221 cgtatttcgt tttcaaagca gccttgttga ccaccaggta gctggaaatg tcgacgatgt
    17281 gttcgactgc ctccaagccg tttgccttca aggtgtttcc cgtcgaaacc aagtccacaa
    17341 tcgcatcgct caagccgacc agcggcgcaa gttccatcga gccgtacagt ttgataatgt
    17401 ccacatggac acccttgccg gcaaaatgag atgccgcgat ttcaggatac ttcgtggcaa
    17461 tcttcagacg gcatccgggt tgcgaagcgg cttcgtaatc aaacccttta cgcacagcaa
    17521 ccatcatgcg gcacttggca atctccaaat ccaaaggtcg gtaaagcccc gtgccgccgt
    17581 gttcgatcag cacgtctttg cccgcaatgc cgaagtccgc cgcgccgtag cggacataag
    17641 tcggcacatc ggttgcgcgg acaatgacaa ggcggatgtt ttcatggttc gtcccgataa
    17701 tcagcttgcg cgatttttcg ggctcttcag tcggagcaat gccggcagcg gcaagcagcg
    17761 gcagcgtctc ctcaaaaatg cgccctttgg ataaggcgat ggtcaaagca ttatcctgca
    17821 tggtgtggat gtcctttgtc ggttgaaaca ataatgccgt ctgaacaggc accggcggtg
    17881 cagacggcat acggttttat cagagcaggg tccttacatc ggcagcaatc gtttccggct
    17941 cgcttccgta aggcgagaaa atggcaacct caccgttttt atcgataaga tacgcaccgg
    18001 aagagtggtc gaccaaatag ttttcgctgt cgtctttttg attgattttg gcagaaacca
    18061 cgcggtattg ctgcttgatg accggcaggt tttggccgcc cgttgccgtc agaccgataa
    18121 agtccggatt gaactgtttg gcatacttgc cgatgatttc aggcgtgtcg cgttccggat
    18181 cgatgctgac gaacaccact ttcacgtcct tagcctgccc gcccaactgc ttcaaagtgt
    18241 cgctgtacgt caaaagccct gtcgggcaga catcgggaca gtgcgtaaag ccgaaagaca
    18301 gaatcacgac cttgcctttc aaatcgctca ggctgaaagg cttgccttcg ccgtcggtca
    18361 gtgtgaaatc gccgccgatg tcttccttac gcatatccgt accgcgcgtt tgcggctttg
    18421 ccgcattttc cgcagccggc gcggatgcac ttgaagaagc ggcttgcgcc gcactgttgt
    18481 cttgaggttt gcaggcggca agcgcggcaa gtacgaaaac gcccggcaaa aaggaacgcg
    18541 gtacggaaaa catgacaatc tcccaagaat aaatagaaaa acctgattcg tacggaattt
    18601 gaatatttcc atcttaacgc gtttggcaga tttaatgtag tattttttta cgttgtctgt
    18661 acggcaggaa ttgccgaatc atacagaatc tttggagcgg aaagaacagt aagattaaaa
    18721 taataaaaat tctatttaaa atcaaaaaca aaataaa
//
LOCUS       DAXGCP010000038        18203 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.038, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000038 DAXGCP010000000
VERSION     DAXGCP010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18203
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.038"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            6..536
                     /locus_tag="ACFJCW_001139"
     CDS             6..536
                     /locus_tag="ACFJCW_001139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HFC4151297.1"
                     /translation="MNAIRTFQNRTPEIHETCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGSTVLDDAVIEDDVMIGAGSLVPPRKRLEGGYLYIGSPVRQVRLLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            647..802
                     /locus_tag="ACFJCW_001140"
     CDS             647..802
                     /locus_tag="ACFJCW_001140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151298.1"
                     /translation="MPSESLFFGFGRHFIADFFLEFDRMFARFVEHDVRPTFLRQSQI
                     HALGRTR"
     gene            complement(910..2505)
                     /locus_tag="ACFJCW_001141"
     CDS             complement(910..2505)
                     /locus_tag="ACFJCW_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HFC4151299.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVEDI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGINNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATMRMVGPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHNRELAEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(2612..3007)
                     /gene="hisI"
                     /locus_tag="ACFJCW_001142"
     CDS             complement(2612..3007)
                     /gene="hisI"
                     /locus_tag="ACFJCW_001142"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HFC4151300.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDTIVMLIAQNGGIACHTGRES
                     CFYKKWNGGAWETADAVLKDEKEIYGSTH"
     gene            complement(3038..3805)
                     /gene="hisF"
                     /locus_tag="ACFJCW_001143"
     CDS             complement(3038..3805)
                     /gene="hisF"
                     /locus_tag="ACFJCW_001143"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HFC4151301.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLINEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AVEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGIFHFGEIGIREAKRTMREAGIEVRL"
     gene            complement(3818..4555)
                     /gene="hisA"
                     /locus_tag="ACFJCW_001144"
     CDS             complement(3818..4555)
                     /gene="hisA"
                     /locus_tag="ACFJCW_001144"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HFC4151302.1"
                     /translation="MLLIPAIDLKEGRCVRLKQGLMEEATVFSDSPADTALHWFEQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGMRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDLVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDTTVKLAQSVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(4588..5226)
                     /gene="hisH"
                     /locus_tag="ACFJCW_001145"
     CDS             complement(4588..5226)
                     /gene="hisH"
                     /locus_tag="ACFJCW_001145"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HFC4151303.1"
                     /translation="MQTAIIDYGMGNLHSVLKSVRTAGQLAGKNTKIFLSGDPDRVSR
                     ADKVIFPGQGAMPDCMAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFARDLRDPQGCRLKVPHMGWNTVRQTQNHPLFQGIPQNTRFYFVHSYY
                     FAPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(5356..6858)
                     /gene="pta"
                     /locus_tag="ACFJCW_001146"
     CDS             complement(5356..6858)
                     /gene="pta"
                     /locus_tag="ACFJCW_001146"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HFC4151304.1"
                     /translation="MAKVLVVPVSAGLNTSAAAQAFAKALDAQVFQAVDATAETLLTQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NTDADALAHQLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQAGKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVEPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(7043..8101)
                     /gene="fbpC"
                     /locus_tag="ACFJCW_001147"
     CDS             complement(7043..8101)
                     /gene="fbpC"
                     /locus_tag="ACFJCW_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HFC4151305.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKT
                     TLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIA
                     YGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCRLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPAASIHAVVLKTTPKARHTEISLRAGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(8122..9639)
                     /gene="fbpB"
                     /locus_tag="ACFJCW_001148"
     CDS             complement(8122..9639)
                     /gene="fbpB"
                     /locus_tag="ACFJCW_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HFC4151306.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLTAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LILGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTADDVHTLSTAVWEYTSDAQYAAAAPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(9707..10702)
                     /gene="fbpA"
                     /locus_tag="ACFJCW_001149"
     CDS             complement(9707..10702)
                     /gene="fbpA"
                     /locus_tag="ACFJCW_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HFC4151307.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYVPT
                     SGAFLEQIVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLAGKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(10954..11434)
                     /locus_tag="ACFJCW_001150"
                     /pseudo
     CDS             complement(10954..11434)
                     /locus_tag="ACFJCW_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
     gene            complement(11492..12868)
                     /gene="argH"
                     /locus_tag="ACFJCW_001151"
     CDS             complement(11492..12868)
                     /gene="argH"
                     /locus_tag="ACFJCW_001151"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HFC4151308.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDQRLAEWDIQGSLAHAQ
                     MLTRSGVLSENDLTDIRRGMSEILEEIRSGKIEWPLDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQNLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDFERMADCRKRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAIEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPGNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEALQGFSKLISDDVYGVLTPEGSLNARNHLGGTAPEQVRLQV
                     KRWREMSA"
     gene            complement(12887..13756)
                     /gene="galU"
                     /locus_tag="ACFJCW_001152"
     CDS             complement(12887..13756)
                     /gene="galU"
                     /locus_tag="ACFJCW_001152"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HFC4151309.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKANPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETKLEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEPSQTGSYGIVETEQLKQFQRITGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(13784..14383)
                     /gene="rdgB"
                     /locus_tag="ACFJCW_001153"
     CDS             complement(13784..14383)
                     /gene="rdgB"
                     /locus_tag="ACFJCW_001153"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HFC4151310.1"
                     /translation="MSEKPEKIVLASGNAGKLKEFGNLFKPYGITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAGHSGLPALADDSGICAAALNGAPGIHSARYAGSNPKSDTA
                     NNLKLAAELAGKADKSCSYVCVLVFVRHKDDPRPIIAEGIWHGQWHDTPLGQNGFGYD
                     PYFYLPEHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(14376..14609)
                     /locus_tag="ACFJCW_001154"
     CDS             complement(14376..14609)
                     /locus_tag="ACFJCW_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HFC4151311.1"
                     /translation="MNRRKIYLLSVALFTLAFMLPVLLGAYLLTAGSKAFAVASFLFA
                     FGALFGQISALALYLRHKSLRAAPSSSQGNRYV"
     gene            complement(14717..15250)
                     /locus_tag="ACFJCW_001155"
     CDS             complement(14717..15250)
                     /locus_tag="ACFJCW_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HFC4151312.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RIEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGGAE
                     EAKKVIKESIERWNKQA"
     gene            complement(15352..15810)
                     /gene="nudB"
                     /locus_tag="ACFJCW_001156"
     CDS             complement(15352..15810)
                     /gene="nudB"
                     /locus_tag="ACFJCW_001156"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HFC4151313.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPKGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLEDGQLQDRHDSTVYEIYHHWRHRYPKGVFENREHVFR
                     AEIPRDTPVVLQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            16021..16097
                     /locus_tag="ACFJCW_001157"
     tRNA            16021..16097
                     /locus_tag="ACFJCW_001157"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16055..16057,aa:Pro,seq:ggg)
     gene            16360..>18203
                     /gene="mafB"
                     /locus_tag="ACFJCW_001158"
     CDS             16360..>18203
                     /gene="mafB"
                     /locus_tag="ACFJCW_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HFC4151314.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDPFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLMIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFMAAIPIKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSDNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAHAQREWENKTGLDFNHF
                     IGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVEIKKPDGSWEVKTKKGG
                     KVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSKSGIKIEG"
BASE COUNT         3773 a         4478 c         5581 g         4371 t
ORIGIN      
        1 gaaaaatgaa cgcaatcaga actttccaaa accgcacgcc cgaaatccac gaaacctgca
       61 tgatagacga ggcgtgcgtc gtcatcggcg aagtctcgct tgccgaagat gtttccgtgt
      121 ggccgtgcgc cgtgttgcgc ggcgatgtga acagcatcac cgtcggcgcg cgcagcaata
      181 tacaggacgg cagcgtcctg cacgtttccc acaaaaccgc cgccaaaccc gaagggtcgc
      241 cgctggttat cggcgaagac gttaccgtgg ggcacaaagt gatgctgcac ggctgccgaa
      301 tcggtaaccg cgtcttggtc ggtatgggca gcaccgtttt ggacgatgcc gttattgaag
      361 atgacgtgat gatcggcgcg ggcagcctcg ttccgccgcg caaacgtttg gagggcggct
      421 atctttatat cggttcgcct gtgaggcagg ttcgtctgct gaccgatgag gaaaaagcct
      481 ttttgaaata ttccgccgca cattatgtga agctgtcgaa acagtacggg atgtgaaatc
      541 acatcggcgt tcttgcgtca accccaaatt cacgcggttg gacgcacccg atgatgattc
      601 cgatgcgcct tgattttgac cggctgcgtt tgagttgcag gcaaaaatgc cgtctgaaag
      661 cctttttttc ggcttcggac ggcattttat tgccgatttc tttttagagt ttgaccgaat
      721 gttcgcgcgt ttcgtggaac acgatgtccg gccaacgttc ttgcgtcagt cccaaattca
      781 cgcgcttgga cgcacccgat gatgattccg atgcgccttg attttgatcg gtgcatttga
      841 attgcaggca aaaatgccgt ctgaagccct tttttcgggt tcggacggca ttttattgcc
      901 gatttctttt tagagtttga ccgaatgttc gcgcgtttcg tggaacacga tgtccggcca
      961 gcgttcttgc gtcaacccca aattcacgcg gttgggggcg aggtaggcga ggttgccgcc
     1021 tgcgtcgatg gcgaggttgc ctgcgttggc tttttcaaat tccgccagtt ttttcttgtc
     1081 gtcgcacgat acccagcgcg ccgaccagat ggatgcgctg tcgaacacgg cttccacgcc
     1141 gtattcgttg gcgaggcgtg aggttacgac ttcaaactgc aacacgccga ccgcacccaa
     1201 aatcaaatcc gcgccgctca tcggtttgaa tacttgaacc gcaccttctt cgccgagttg
     1261 ttgcaaacct ttttgcagtt gtttgatttt cagcgggttt ttgatgcgga cgctgcggaa
     1321 cagttcgggc gcgaagaatg ggatgccggt aaacgccagt tgttcgcctt cggagaagct
     1381 gtcgccgatt tggatgttgc cgtggttcgg gatgccgatg atgtcgccgg cgtaggcttc
     1441 ttccgccagt tcgcggttgt gcgacatgaa ggttactacg ctggaggcgg cgatttcgcg
     1501 gttgatacgc aggtgtttca tcttcatgcc gcgctcgaat ttaccggagc agacgcgcaa
     1561 gaaggcgata cggtcgcggt gtttcgggtc catattggct tggattttaa agataaatcc
     1621 ggaaaatttc ggctcgtccg gcccgaccat gcgcatggtc gcgtcgcgcg gtttcggtgc
     1681 gggtgcccag tcaatcaatg aattgaggat ttcctgaatg ccgaagttgt taatcgcaga
     1741 gccgaagaac actggcgtga gttcgccggc gagaaattcg tcgagattaa attcgttgga
     1801 agccgcctgc accaattcga tttcgtcgcg caactgctgg atttccaacg gaaagcgttg
     1861 ttccaattcg ggattgttta tgcctttgat gatgtcgaac tcgtgcggca ggcgttcgcc
     1921 gcccgcttca aagagataga tttcgtcgtt caggatgtgg tacacgccct tgaagttttt
     1981 gcccataccg atcggccagg taacgggtgc gcagcggatt tgcaggatgt cttccacttc
     2041 gtccaagagt tccaaagaat cgcgcacttc gcggtcgtat ttgttcatga aggtaacaat
     2101 cggcgtatcg cgcaggcggc agacgttcaa gagtttgatg gtttgcgctt ccacgccttt
     2161 tgccgcgtcg atgaccatca aggcgctgtc cactgcggtt aaaacgcggt aggtgtcttc
     2221 ggagaagtct tggtgtcccg gcgtgtccaa gaggttgacg gtgtggtctt tgtagtcgaa
     2281 ctgcatcacg cttgatgcca cggaaatgcc gcgctgcttc tcgatgtcca tccagtcgga
     2341 ggtggcgaat ttgccggttt tcttaccttt caccgtgcct gcgctttgaa tcgcgcccga
     2401 aaacagcagc agtttttcgg tcagcgtggt tttacccgca tcggggtggg agatgatggc
     2461 aaacgtgcgg cggcggcgca cttggtcgag gatttcttgg gacatggttt tctttgcaaa
     2521 aaggttcagg ccgcttttca gacggcccgg acagtgtttg agacggcgaa attgtacaaa
     2581 aaaatgcctg ataattcaat gttggaggcg gtcagtgcgt gctgccgtaa atctcttttt
     2641 cgtctttcag gacggcatcg gcggtttccc acgcaccgcc gttccatttt ttgtaaaagc
     2701 agctttcgcg cccggtgtgg caggcgatgc cgccgttttg ggcgatgagc atcacaatgg
     2761 tatcgccgtc gcagtcgagg cgcagttcgc ggactttttg cgtgtgtccc gactcttcgc
     2821 ccttcatcca ttgtttttgg cgcgaacggc tgtaatagtg ggcaaagccg gtttcgacgg
     2881 ttttttgcag ggcttcggcg ttcatccacg ccaccattaa aacacgtttg gtttcggcat
     2941 cttgggcgat ggcgcaaacc aaaccttttt cgtcaaattt gacggcttca agcaggtttt
     3001 tatccatatt tcctttcaga cggcatagtc ggggcggtca gaggcgcact tcgatgccgg
     3061 cttcgcgcat agtgcgtttg gcttcgcgga tgccgatttc cccgaaatgg aaaatgccgg
     3121 cggcaagtac ggcatcggct ttgccttcgg ttatgccttc aatcaggtgc cggacattgc
     3181 cgaccccgcc ggaggcgatg acggggatgt cgacggcttc ggcaacggcg cgggtcagcg
     3241 gcaggttgaa accctgtttc gtcccgtccc tgtccatacc ggtgagcagg atttcgcccg
     3301 cgccgcgttt ttgcatttcg accgcccatt ccaccgcatc caaaccggtc ggattgcgcc
     3361 cgccgtgggt aaagatttcc cagcgtgtgt tttcggggtt gacggctttg gcatcgacgg
     3421 cggcgacgat ggcttgcgaa ccgaaaaatc cggcggcttc gttaattaaa tcgggacggg
     3481 taacggcggc ggtgttgatg ctgactttgt ccgcgccggc attgagcagg cggcggatgt
     3541 cggcaacggt gcgtacgccg ccgccgacgg tcagcgggat gaagacttgt ccggcaacct
     3601 cttcgatgat gtgcaggatg gtgtcgcggt tgtcggatga ggcggtgatg tcgaggaagg
     3661 tcaattcgtc cgcgccttcg ccgttgtagc gtttggcggc ttcgacgggg tcgcccgcgt
     3721 cgcgcaaacc gatgaagttc acgcctttga cgacgcgccc gtcttttacg tcgagacagg
     3781 ggatgatgcg ttttgccagt gccataatcg gatgccttta gtcgagggaa tctgccagtt
     3841 gctgcgcttg ggcaaaatcg atgctgccct cgtaaatcgc gcggccggta atcgcgcctg
     3901 ctacgccatg tttttcggcg gcacacaggg cgcggatgtc gtccaagccg gtcagtccgc
     3961 cggaggcgat gacgggaatg cggacggatt gggcgagttt gaccgtcgtg tcgatgttca
     4021 cgccgctcat cataccgtcg cgcccgatgt cggtgtagat gatgctgttg acaccgtcgt
     4081 cttcaaagcg ttttgccaaa tcaattacat gatgcccggt tacggttgcc cagccgtcga
     4141 tggcggccat accgtctttg gcatccagtc cgacgataat cctgccgggg aaggctttgc
     4201 acgcttcgcg caccaagtcg gggtttttga ctgccgccgt gccgataatc acgtcgttca
     4261 gtcccaaatc caaatattgt ccgatggttt tcaaatcgcg catgccgccg ccgagctgca
     4321 cggggatgtc tttggcgacg gcggcgagga tgtctttgat ggcgggcagg ttttgcggaa
     4381 cgccggcaaa tgcgccgttc aaatctacca ggtgcaggcg gcgcgcgcct tgttcgaacc
     4441 agtgcagcgc ggtgtcggcg ggcgaatcgg aaaagacggt cgcctcttcc atcagccctt
     4501 gtttcaagcg gacgcaacgt ccttctttca aatcgatggc gggtatcagc agcatagttt
     4561 ttctccttgt gcggggccgt gtccggctta ccagtttaaa aagtttttca acatcgtcag
     4621 cccggcatcg tggctttttt cggtgtgaaa ttgcgtggcg aatacgttgt ctttgccgac
     4681 gatgcaggca aacggggacg ggtagtcgct ttcgcccaat atggtttcgg gattttcggg
     4741 ggcgaaatag tagctgtgga cgaaataaaa acgcgtgttt tgggggatgc cttgaaaaag
     4801 cgggtggttt tgggtttggc gcacggtgtt ccagcccata tgcgggactt tcagacggca
     4861 tccttgcggg tcgcggaggt cgcgggcaaa gcgtctgact ttgccgccga accagcccaa
     4921 gccgtcggtg tttccttctt cgctgtggtc gaataaaagt tgcgcaccga cgcagattcc
     4981 gaaaaacggt ttgtttttta aggcgtcttt gactgcctcg tccaagccgc cgcgcgtcag
     5041 tgccgccata cagtcgggca tcgcgccctg cccgggaaaa atgactttgt cggcgcggga
     5101 cacgcggtcg gggtcgccgc ttaaaaagat tttggtattt tttccggcaa gctgccccgc
     5161 cgtccggacg gatttcaata cggaatgcag gttgcccata ccgtaatcga taatggcggt
     5221 ttgcatggct tcctcctctt ttttgcaata tggctgcgat tttaacaaac aaatgtgccg
     5281 ggctgataaa aatgccgtct gaaaacggga atctgtcttc agacggcata gggttcaaac
     5341 ccggaaagcc gtttgtcagc cttccatttg ttttgcctga acggcagtca gggcgatggt
     5401 gaacacgatg tcttccacca gcgcgccgcg agacaggtcg ttgaccggtt tgcgcaggcc
     5461 ttgcagcagc gggccgacgc tcaagacgtt ggcactgcgt tggacggctt tataggtgca
     5521 gttgccggtg ttcaggtcgg ggaagaccaa aacggttgcc tgtcctgcca ccgggctgcc
     5581 cggggctttg gatttgccta cgcccggcac ggttgccgcg tcatattgca gcgggccgtc
     5641 gatggcgagg tcggggcgtt tttcccgggc aagtttggtg gcttcgatga cggtatcgac
     5701 atcggggccg ctgccggagt tgacggtgga gtaggaaatc atcgccactt tcgggtcgat
     5761 gccgaaggct tttgcggaat cggcagactg gatggcgatg tcggcaagct gttgcgcggt
     5821 cgggttcgga ttaaccgcgc agtcgccgaa caccagaacc tgatttggta gcagcataaa
     5881 gaatacgctg gatacgaggc ttgcgcccgg tgcggtttta atcagttgca aagcggggcg
     5941 gatggtgttg gcggtggtgt gaaccgcacc ggataccaaa ccgtccacat cattttgcgc
     6001 catcatcatc gtaccgagta ccacggtgtc ttgcagttgc ttgcgcgcgt cttcgggtgt
     6061 caggcctttg gatttgcgca gttcgcacat cggctcgacg tattgttcga ccaatgaggc
     6121 gggatcgatg atttccaaag agtcgggcag gctgatgccg cgttctttgg caacggcttc
     6181 gacttcttcg cgtttggcaa gcaggacgca gcgggcaatg cctttttcgt ggcagatggc
     6241 ggcggcttgg acggtgcggg gttctgcgcc ttcaggcagg acgatgcgtt tgccggcttg
     6301 gcgggcgaag tcgatcaggt tgtagcggaa ttgcgccggc gacaggcgtt ttgcttcgcg
     6361 gcctgccaat acggatacgt ctttcagcgc gtcgctcgaa ccgaagaagg tcaggccggt
     6421 tttctcggct gccgcttcgg caacggaggc tgccgcaccg tccacgacaa aaccttccaa
     6481 tacgcccggc gcggcggcga agaactgttt ggcaaggttc aattggtgtg ccagcgcgtc
     6541 ggcatcggta ttgtcggaac ggacggcgaa gacggctgcc gcgtcaaggg acaatgccag
     6601 ttcgacgttt ttgcctgcga gatagatttt gtcggcatcg ggcgcgatgc cttcgatgac
     6661 gaggttggcg gcatcgagtg cggcaacttt gccgaccagt gcgtcgaacc agtcgtcgct
     6721 tttgccttgc gtgagcaggg tttcggcggt tgcgtcaacg gcttggaaaa cttgtgcgtc
     6781 cagtgctttt gcaaaggctt gtgcggcggc ggaggtgttc agtccggcag atacgggtac
     6841 gacgagtact tttgccataa tatatccttt cgtatgctgc ggtgtgcggc atatgtggtt
     6901 ggaaggggcg gcatatgggc agaaacggct gcctgcgtgc cgtgcgtgcc gtgtttggct
     6961 tggggcgcgc aggttgaata tagcaaacaa attctgtttc caacaagata aatatccgca
     7021 ggcttgtgga tgctgccgcc tttcagaggg tatttccggg gaagaacagg gcgggaccgt
     7081 ccaaatggag gacggcggaa atgccgtctg acagggtggg ggcggaaggg aggttgagcg
     7141 tgaggacggt ttgtccggcc ctgaggctga tttcggtatg ccgcgctttg ggcgtggttt
     7201 tgagaaccac ggcgtgaatg gaggcggcgg gtgcggaatg ggggtgaagg ctgaactgtt
     7261 ccggacggat gagcagtgta ccgcgcgtgc ctgcgggtgc gccgctttgg acgggcaggc
     7321 ggcccaatct gcaatcggcg gtgccgtcgg cgttgagcgc ggcggggaac acgatgcctt
     7381 cgccgataaa cagggcggca tcaaggtcgg caggttgtcg gtacaattcg tgagggcttg
     7441 cggtttggag gatgcgcccc tgtttcatca cggcaatccg gtcggcgtat tgcagggctt
     7501 cttcgcggtc gtggctgaca aaaacggcgg attttccgtt ggcgcgcagg gcggcaatca
     7561 tgtcttcgcg aatctggcgg cgcaactgtt cgtctagcgc gctgaagggt tcgtccaaca
     7621 aaatcagttc ggggtcgggg gcgagggcgc gggcgagggc gacgcgctgt tgttgtccgc
     7681 ccgaaagttc gtgcggatag cgtccggcaa gttcggaaat gccggtcaat tccaacatgg
     7741 cttcgatgcg ctgtcgctct tgcgccgtcc tgcctttgcc gttgccgaga ccgtaggcga
     7801 tattgcggta aacggtcagg tgggggaaca gcacgccttc ctgtacgagg taacccaaac
     7861 ggcgttcgcg gacgggaagg ttggtatttt tcgagaagat ggttttgccg gaaagcgaaa
     7921 tttcgccgga atcgggttgt tcgaaaccgg caaggcagcg taaaagggtg gttttgccgc
     7981 agccggacgc gccgatgata aagagaattt cgcccgggtc gaggctgagc gaaatgtcgt
     8041 ttaaaaccgg ggtgttttga aaacttttgg acaggtgtcc gatgtgcagg gcggcggtca
     8101 tagcggtgct tcctcaagct gttatttgaa ggcgtatttc ttcagcagga atacgggtat
     8161 gccggaaaat aataccagca tcagcgcgta aggggcggcg gcggcgtatt gtgcgtccga
     8221 tgtgtattcc caaacggcgg tggagagcgt gtggacatcg tcggcggtca gcagcagggt
     8281 ggcggtcaac tctttcatca gcttgaggaa gacgagtgcg aatgcggcgg taatgccggg
     8341 caggatggac ggcagtacca acgtcctgaa aataaagaag tgtccgcgcc ccaatgttgc
     8401 gccgacctgt tccatccctt tggggagttg ttccaaggaa gtcctcaggg tggtttgcgc
     8461 catcggcagg taaagcatga aataggcaag gatgacgacg ataaaggttt ggtaaacggc
     8521 aggggtgtag ttgatgctga aataaaccaa ggatagggcg ataaccaaac cggggacggc
     8581 gtgcagtaaa aacggcagcc tgtctatcca aacggttaaa aaattgcgat agcgaaccga
     8641 tgcccaaaca aggggcaagg cacataatat agtcaaaatc gcacctaaag ccgatacgct
     8701 taaggaacgg ataaaggcat caaatacgga tacgagcgcg aatgtgccgg aagtgccgac
     8761 catcatccaa tgtatcaata cgccaaaggg gataataatg cccaaaatca acaagctgct
     8821 taaaaaaaca atcgcgccga tctgaccggg cagtttgagg gttttgacgg gataaggacg
     8881 ggcaacgcct ttgccgctgt ggtaaatctt ggctttgccg cgaaatatgc tttctccaaa
     8941 tacgacgatg ccgcacaccg ccgtcaaaac agcggaaagc agggcggcgg tattgttgtt
     9001 gtaggacatt tcgtattctt ggaaaatggc agtggtaaaa gtggggtagt tcaaaatgga
     9061 taccgcgcca aattcgacca gcatatgcag ggcgatcagt aacacgctgc tgccgatggc
     9121 gggtttgagc tgcgggagga tggcggaaaa aaaggtttgc aggcggcttt tgcccaagga
     9181 caggctgact tcttcgtaag acaggctgat gcgtttgagt gccgcctcga cgggcaggta
     9241 ggcgagcgga aacgaggaca ggctcataat catcactgtc ccccaaaagc cttcgacgcg
     9301 gaaggtcagg ctgatccagg tgaaacagct gacaaatgcg gggatgcaca aaggcagggt
     9361 gattgccgtc tgaaaaaagg ttttgccgaa gaagcggtaa cgttggaaca aaagggcgca
     9421 ggcaatgccc aaaacaatgg aaatcagggt aacgcccgcc atcatcgtca aggtgttgga
     9481 gagcaaatcc cacatacgcg ggcggaacaa cagttcgacg gcgcggttga tgccgacctg
     9541 ccacgaacgc atagcgacat ataaaaaagg cagggtaagc ggcagggcga tcagtaggat
     9601 gaggccggta agccaaatgg gtattttttt aggagacata gtgtttttca tcggcaaaac
     9661 gggcggacag tataaatgtc cgcccgtttg acaatccgaa aacggcttat ttcataccgg
     9721 cttgctcaag cagccgggtg gcgtgttctt tttcggaaac agtggtggcg gacacttggg
     9781 gtgcttccaa cttggcgatg ggttccaaat tgaaggtgga taccacgtgc ggattcaaag
     9841 gatattcggc acggacggcg gtcagggcgc gctgtccttc cttgccggcg aggaaggcga
     9901 cgaatttttt cgcctcatcc ttgttttggg aggattttaa cacggctgcg ccggaatagg
     9961 taacgagtgc gccgggatct ctgtggcgga cgaaattcag gcgggtgtgg acattttgta
    10021 cgcctttttc acgcgcgaaa gcgtgccagt agtagttgtt gatgagggcg gcatcgattt
    10081 cgccgttttc aaccgcttga agggcgacgg agtttttagc gtaaggcttg ccgtattctt
    10141 tcaggccttt gagccatttc aatgcggccg cttcgccttt cagtttgacg atggcgacaa
    10201 tctgttccaa gaacgcgccg gaagtgggga cgtaaccgat gcggtttttc catttcggcg
    10261 tggcgtaatt caggacggat ttttccaaat ctttttcaga cagtttgcgg gtgtcgtaaa
    10321 cgacgacgcg cgaacgtccg ctcagtgcca cccagtcttt tttggcggca accggcacgc
    10381 ctttgccgcg tgtttcgttg atggtggagg cgggcagggg ctctaggagg ttggctgcgg
    10441 aaagggtggc gagtgccggg atttgttcgg aatagaatac gtcggcgggg cttcggctgc
    10501 cttcttcttt gatttggccg gcaagctggt cgcctttggc actgttgagt ttgactttga
    10561 tgccggtagc ccgggtaaag gcatctgcaa cggcttgtgc cgcttctttg tgttggccgt
    10621 tgtacacggt aatgtctgcc agcgcggggg tggcggcggt cagggctgcg gcaagcagtg
    10681 cgtatcggat agatgttttc atatcgattt tctcctaaat gaatgagggt gtataccttg
    10741 ttaagacata acggggtgta gtgtattcct tcttttttat aaatgcaaat aattattttt
    10801 taaatttgtt attatccgat ccggttattg tttgttctga cttgtatttt ttccgtgcat
    10861 cgcgcccgta aggcggaagc ggcgggcaat gtgtggcgga atgtgggtaa aggcggcatt
    10921 ttgatttgtc ggaatgctgg agaacctctc cctttaaaac gccgtctgaa caaggttgcc
    10981 ggaatagtat tgccatcccg gcagatacag tttgtcggga tcttgccaat attgttcatc
    11041 cagactgttc ggcagcgagg cggttttgtt gtcgagatgt tttgttaatc cactatatat
    11101 cccacatttc ttttaggttt ttaccttctg attggaggtg gcggatttct tttcccaatg
    11161 cgtctgccgc ccgatggatc agcattgcgc tgtgtaccgc gccgattttt ttcagaacgg
    11221 aacaagtctt ttcggcggcg ggaagacccc agttgcagac aaattgcagt atgccgccgt
    11281 tgccgatgtc ggcttccgcc cgccaaatca aaaccagctc ctgttcccgt ccgtccatgc
    11341 tttcgagttt gccgtcatgc tgttcaaaaa gtttgtccac cgcctgccgc atcatctgct
    11401 cgaagcggtc ggcttgggta tccgtatcgg tcatagtatt cttgcctttt aaaaatgccg
    11461 tctgaacatt tcttcagacg gcatttgggg gttaagctga catttcccgc cagcgtttga
    11521 cttggaggcg tacctgttcg ggcgcggtgc cgcccaagtg gttgcgcgcg ttgaggctgc
    11581 cttcgggtgt cagaacgccg tacacgtcgt ctgaaatcag cttgctgaag ccttgcaggg
    11641 cttcgagcgg caattcgctc aaatcaacgc cggcttcatc ggcgtggcgc acggcttggg
    11701 caacgacttc gtgggcatcg cggaagggca tacctttttt gaccagataa tccgccaagt
    11761 cggtggcggt ggcaaaaccc tgcatcacgg cggcgcgcat attgccgggt ttgacggtta
    11821 cgccgcgcat catatcggcg taaatccgca gcgtgtcgat gagcgtgtcg gcggtgtcaa
    11881 acagcggttc tttgtcttcc tgattgtctt tgttgtatgc caagggctgc gatttcatca
    11941 gggtaatcag gccgataagg tgtccgatga ctcggccgga tttaccgcgc acgagttcgg
    12001 gtacgtcggg gtttttcttt tgcggcatga tggacgaacc cgtacagaag cggtcggcga
    12061 tgtcgataaa gccgaaacgc ggactcatcc acaaaatcaa ttcttcagac aggcggctca
    12121 agtgaaccat aaccagcgag gcggcggcgg tgaactcaat ggcaaaatcg cggtcggata
    12181 cggcatcgag cgagttctgg cagatttgtt cgaaacccaa caattcggcg gtgatttcgc
    12241 gctgaatcgg ataggtcgta ccggcaaggg cggcagcgcc gagcggcata cggttgacgc
    12301 gtttgcgaca gtcggccatg cgttcgaaat cgcgtccgag catttcgacg taggcgagca
    12361 tgtggtgtcc gaagctgacc ggctgggcga cttgcagatg ggtaaaaccg ggcatgacgg
    12421 tttcggcgtt ttgttccgcc aaatccaata atgccgtctg aaggttttga atcaggtttt
    12481 ggataacggt aatctggtcg cgcagccaaa ggcggatgtc ggtggcgact tggtcgttgc
    12541 ggctgcggcc ggtgtgcagg cgtttgcccg cgtcgccgat tttgtcggtc aggcggcgtt
    12601 cgatgttcat gtggacatct tccaaatcga gcggccattc gattttgccg ctgcggattt
    12661 cttcgaggat ttccgacatg ccccgacgga tgtcggtcag atcgttttca ctcagcacac
    12721 ccgaccgggt cagcatctgc gcgtgggcga gcgagccttg gatgtcccat tcggcaaggc
    12781 gttggtcgaa accgatggag gcggtgtatt gtttgacgag ttcggaaacg ggttcgttga
    12841 aacgtccgga ccaggttttg tcgtgcataa ggattccttg atggggttat tcggtgcggt
    12901 atttttccaa aaggcggcgg aagggttcgc cggtttcggg gtgttttaaa ccgtaggcga
    12961 cggtggcttc gagatagccg agtttgctgc cgcagtcgta gcgcgtgcct tcaaaggggt
    13021 gcgccaagac aaattcgtga tcgagcagct tggcgatgcc gtctgtaagc tggatttcgt
    13081 tgcccgcgcc gcgcggcagg ccggttaaaa ggtcgaaaat gcgcggggtg aggatgtagc
    13141 gtccgacaac ggcaaggttg gagggcgcgt cttcgggctt gggtttttcg acaatgccgg
    13201 taatgcgttg gaactgtttg agctgttcgg tttcgacgat gccgtatgag ccggtttgcg
    13261 acggttcgac ggtttctacg cccaaaatgc tgttaccgct gcgcccgtac acttcgacca
    13321 tttgtttgag cgcgcctttg ggcgcatcga ttaagtcgtc ggcaaggatg acggcgaagg
    13381 gttcgtcgcc gatggcggcg cgggcgcaca agacggcgtg tcccaatccc agtgcttccg
    13441 cctgacggat gtagaggcag gtaatgttcg gcggcaggat gttgcggacg tgttccaaca
    13501 atttgtcttt atggcgcatt tccaacttag tttcgagttc gtatgccttg tcgaaatggt
    13561 cttcgatgct gcgcttgttg cgcccggtaa caaacaccat ttccgtgcag ccggcttcca
    13621 cggcttcttc tacggcgtat tggatcagcg gcttgtcgac gatgggcagc atttctttcg
    13681 ggttggcctt ggtggcgggc aggaagcggg ttcccatccc tgcaacgggg aagacggctt
    13741 tttttatcgg tttcattctt tttcctttgt attgttttga tgtttaaagg gcgagtttgc
    13801 ggattaaatc ggcgagtgcc tgcgcgcggt ggctttcgcg gtttttgacc tccgaatcca
    13861 attcggcggc ggttttgccg tgttcgggca gataaaaata cgggtcgtaa ccgaaaccgt
    13921 tttgcccgag cggcgtgtcg tgccattgtc cgtgccatat gccctcggcg ataatcgggc
    13981 gcgggtcgtc tttatgacgg acaaaaacca atacgcagac ataagaacaa cttttgtcgg
    14041 ccttgccggc aagttcggcg gcaagtttca ggttgttggc ggtatcggat ttgggattgc
    14101 tgccggcgta acgtgcggaa tggatgcccg gcgcgccgtt tagggcggcg gcacagatgc
    14161 cgctgtcgtc ggcgagtgcg ggcagcccgc tgtgtccggc ggcgtgccgg gcttttgcca
    14221 gcgcgttttc gacaaaggtg ggatagggtt cggggcattc gggtatgccg aatgcggatt
    14281 gcggcaatac ggtgatgccg taaggtttga ataagttgcc gaattctttg agcttgccgg
    14341 cattgccgct tgccaaaacg attttttccg gtttttcaga catagcggtt tccctgtgat
    14401 gaagatgggg cggcgcgtag ggatttgtgc cgcaggtaga gggcgagtgc gctgatttgc
    14461 ccgaacagcg cgccgaatgc gaaaaggaag gacgcgacgg cgaaggcttt gctgccggcg
    14521 gtcagcagat aagcacccaa gaggacgggc agcataaatg ccagtgtgaa caaggcaaca
    14581 gacaacagat agatttttcg gcggttcatg gcgttcggtc ggaaacggga tgttcggatt
    14641 atagccgatt aggacggcat tccctagagg ctggaaaaat gccgtctgaa gcggcgttca
    14701 gacggcatgg cgggcattat gcctgtttgt tccaacgttc gatggattct ttgatgactt
    14761 ttttcgcttc ttccgcaccg ccccaggatt cgactttggt cgtacccgct tttttcaggt
    14821 ctttgtagtg gttgaagtgg aactcgattt gtttgatgag ctgttgcggc aaatcggaca
    14881 aagttttgta ggcgttgccg ttattgcggt cgtcggcagg gacgcagacg attttgtcgt
    14941 ccacttcgcc gtcgtcgacg aatttcatca cgccgataac gcgcgcttcc aagaatacgc
    15001 cggttgccag aggttgttcg gtaacgagca acacgtccaa ttcatcgccg tcttcgtcca
    15061 aagtttgggg gatgaagccg tagttggtcg gtttggcgaa gatggcgggt tcgatgcggt
    15121 cgagttggaa tgcggcgagt ttgcggttcc actcgatttt gtggttgctg ccggcgggga
    15181 tttcgttgac gacgttgatg atgccgccgt ccacgtcgcc cggggtcagg atttggttga
    15241 agtctgccat ttggtttcct ttatttggga aggtttgaag tttgaaagta tagcacaaac
    15301 gtccggctgg aaatgcgtcc gatgccgtct gaaagggaaa ccgggcgcgt gttaccgttt
    15361 gcccaaaaac ctgcccagtt ccaaaatcgc gcgcctgttg gacggggaaa acactttttc
    15421 cgccgcttct tccaagccga accagccgta ggagacgtgt tcctcgggtt gcaggacgac
    15481 gggcgtatcg cgcgggattt cggcccggaa gacgtgttcg cggttttcaa acacgccttt
    15541 ggggtagcgg tgccgccagt ggtggtagat ttcgtaaacc gtgctgtcgt gccggtcttg
    15601 gagctgcccg tcctccagca ggatgccggt ttcttcccaa acttcgcgcc ttgccgtttg
    15661 ggcgacggtt tcgcccggtt cgaggctgcc ggttaccgac tgccaaaatc ctttcggatg
    15721 cgtgcgttcg atgagcagga tgccgccgtc cccgctataa aggacgacca gtgcggaaac
    15781 ggggtatttg agcggttttg ccatcggcat ctttcggcgg gctgcggtaa tgaaggggcg
    15841 gattatagca aacgccgcac gttatggcgt ttatcctttt ccgtatcctt ttttctgcac
    15901 ggatgggacg cgccggtgtt tgccggtaaa ttttcctttg tgtcaaaaag ataagggcgg
    15961 ttgtgatttt aatgcttgcc aaagtgacgg gcggaaacta taatccgcga cttaccgagt
    16021 cggagtgtgg cgcagtctgg tagcgcactt gcatggggtg caaggggtcg aaggttcgaa
    16081 tcctttcact ccgaccaaaa attccgaaag ccgctttcaa aagcggcttt tttgccgtcc
    16141 gtatgattat gatgtagagt acgcggcgac agacattcaa atgccgtccg aaaaccgttc
    16201 agacggcatc tctttatctt aatagtggat taacaaaaat caggacaagg cgacgaagcc
    16261 gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggttta aatttaatcc
    16321 actatagttt cattccgtac catcttaagg aacatcaaat tgggcatttc ccgcaaaata
    16381 tcccttattc tgtccatact ggcagtgtgc ctgccgatgc atgcacacgc ctcagatttg
    16441 gcaaacgatc cctttatccg gcaggttctc gaccgtcagc atttcgaacc cgacgggaaa
    16501 taccacctat tcggcagcag gggggagctt gccgagcgca gcggccatat cggattggga
    16561 aacatacaaa gccatcagtt gggcaacctg atgattcaac aggcggccat taaaggaaat
    16621 atcggctaca ttgtccgctt ttccgatcac gggcacgaag tccattcccc cttcgacaac
    16681 catgcctcac attccgattc tgacgaagcc ggtagtcccg ttgacggatt cagcctttac
    16741 cgcatccatt gggacggata cgaacaccat cccgccgacg gctatgacgg gccacagggc
    16801 ggcggctatc ccgctcccaa aggcgcgagg gatatataca gctacgacat aaaaggcgtt
    16861 gcccaaaata tccgcctcaa cctgaccgac aaccgcagca ccggacaacg gcttgccgac
    16921 cgtttccaca atgccggcgc tatgctgacg caaggagtag gcgacggatt caaacgcgcc
    16981 acccgataca gccccgagct ggacagatcg ggcaatgccg ccgaagcctt caacggcact
    17041 gcagatatcg tcaaaaacat catcggcgcg gcaggagaaa ttgtcggcgc aggcgatgcc
    17101 gtgcagggta taagcgaagg ctcaaacatt gctgtcatgc acggcttggg tctgctttcc
    17161 accgaaaaca agatggcgcg catcaacgat ttggcagata tggcgcaact caaagactat
    17221 gccgcagcag ccatccgcga ttgggcagtc caaaacccca atgccgcaca aggcatagaa
    17281 gccgtcagca atatctttat ggcagccatc cccatcaaag ggattggagc tgtccgggga
    17341 aaatacggct tgggcggcat cacggcacat cctgtcaagc ggtcgcagat gggcgcgatc
    17401 gcattgccga aagggaaatc cgccgtcagc gacaattttg ccgatgcggc atacgccaaa
    17461 tacccgtccc cttaccattc ccgaaatatc cgttcaaact tggagcagcg ttacggcaaa
    17521 gaaaacatca cctcctcaac cgtgccgccg tcaaacggca aaaatgtcaa actggcagac
    17581 caacgccacc cgaagacagg cgtaccgttt gacggtaaag ggtttccgaa ttttgagaag
    17641 cacgtgaaat atgatacgaa gctcgatatt caagaattat cggggggcgg tatacctaag
    17701 gctaagcctg tgtttgatgc gaaaccgaga tgggaggttg ataggaagct taataaattg
    17761 acaactcgtg agcaggtgga gaaaaatgtt caggaaacga gaagaaggag tcagagtagt
    17821 cagtttaaag cccatgcgca acgagaatgg gaaaataaaa cagggttaga ttttaatcat
    17881 tttataggtg gtgatatcaa taagaaaggc acagtaacag gagggcatag tctaacccgt
    17941 ggtgatgtac gggtgataca acaaacctcg gcacctgata aacatggggt ttatcaagcg
    18001 acagtggaaa ttaaaaagcc tgatggaagt tgggaggtga aaacgaaaaa aggtgggaaa
    18061 gtgatgacca agcacaccat gttcccaaaa gattgggatg aggctagaat tagggctgaa
    18121 gttacttcgg cttgggaaag tagaataatg cttaaggata ataaatggca gggtacaagt
    18181 aaatcgggta ttaaaataga agg
//
LOCUS       DAXGCP010000039        18059 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.039, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000039 DAXGCP010000000
VERSION     DAXGCP010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18059
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.039"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(203..406)
                     /locus_tag="ACFJCW_001159"
     CDS             complement(203..406)
                     /locus_tag="ACFJCW_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151315.1"
                     /translation="MGGQYSSLENFALSVLREKIINNTVSSDEKLLIINDFLSGFLEF
                     DPETGEPVGETLKIEQMIDFFLV"
     gene            complement(502..975)
                     /locus_tag="ACFJCW_001160"
                     /pseudo
     CDS             complement(502..975)
                     /locus_tag="ACFJCW_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1140..2063
                     /locus_tag="ACFJCW_001161"
     CDS             1140..2063
                     /locus_tag="ACFJCW_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HFC4151316.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFLG
                     ADNWRRRLNSGFVVGSDGAALDEHSLFEPGKTMFYYRETSSEDEPRIPFEEKILFVDE
                     HLIVVDKPHFLPVIPGGRFLRETLLTRLRLRPELQHLNVEDITPIHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTKTDLPYPLDVVSRLVRGEKFFTTQEAEGV
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(2142..2783)
                     /locus_tag="ACFJCW_001162"
     CDS             complement(2142..2783)
                     /locus_tag="ACFJCW_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC4151317.1"
                     /translation="MLKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGRGETQDCLAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQVRIPDLLLLIGAAVCHYTDRPEPSAVPNVAKTLMIHG
                     AEDEVVEIEKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(2838..3629)
                     /locus_tag="ACFJCW_001163"
     CDS             complement(2838..3629)
                     /locus_tag="ACFJCW_001163"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HFC4151318.1"
                     /translation="MARHPYRRLRPAKSGFPEVGISEEGNIRSLHLGSDTVQSSMNLD
                     RPSELVLSYSRAMMGWLLFAERLPQHITQIGLGGGSFARWTDTYLPDTRQTAVDINPQ
                     VIAIARNLFELPFEGGKFEIIEADGAEYIKVFRHNTDIILVDGFDGEQIIDTLVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLKLPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLAGLKASNPNNGKHFHL"
     gene            3795..3870
                     /locus_tag="ACFJCW_001164"
     tRNA            3795..3870
                     /locus_tag="ACFJCW_001164"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3828..3830,aa:Thr,seq:tgt)
     gene            4012..4803
                     /gene="panB"
                     /locus_tag="ACFJCW_001165"
     CDS             4012..4803
                     /gene="panB"
                     /locus_tag="ACFJCW_001165"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HFC4151319.1"
                     /translation="MITVNTLQKMKAAGEKIVMLTAYESSFAALMDDAGVDVLLVGDS
                     LGMAVQGRQSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKVHDEAGAAVVLMECVPAELAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMRGQSSIQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            4926..5762
                     /gene="panC"
                     /locus_tag="ACFJCW_001166"
     CDS             4926..5762
                     /gene="panC"
                     /locus_tag="ACFJCW_001166"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HFC4151320.1"
                     /translation="MQIIHTIRELRTWRENIGKVAFVPTMGNLHEGHLALVREARKRA
                     DNVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLAAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPHLQNELCGKFRPGHFRGVATVVSKLFNIVLPDVACFGKKDYQQLAVIKGLTED
                     LNFDIEIVPVDTGRAADGLALSSRNRYLSVGERAEAPRLYRELQAVAESLKQGGLDYA
                     GLERQAADHLTAAGWLVDYVEIRRADTLEMARAGDKKLVVLAAARLGTTRLIDNVEVG
                     LP"
     gene            6089..7927
                     /locus_tag="ACFJCW_001167"
     CDS             6089..7927
                     /locus_tag="ACFJCW_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HFC4151321.1"
                     /translation="MLPARFTILSVLAAALLAGQAYAAGAADVELPKEVGKVLRKHRR
                     YSEEEIKNERARLAAVGERVNRVFTLLGGETALQKGQAGTALATYMLMLERTKSPEVA
                     ERALEMAVSLNAFEQAEMIYQKWRQIEPIPGEAQKRAGWLRNVLREGGNQHLDGLEEV
                     LAQSDDVQKRRIFLLLVQAAVQQGGVAQKASKAVRRAALKYEHLPEAAVADAVFGVQG
                     REKEKAIEALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQEM
                     EIMNLVSLRKPDDAYARLNVLLEHNPNANLYIQAAILAANRKEGASVIDGYAEKAYGR
                     GTGEQRGRAAMTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAAELDGGRA
                     ALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALIGLNNIIAKLSAAGST
                     EPLAEALAQRSIIYEQFGKRGKMIADLETALKLTPDNAQIMNNLGYSLLSDSKRLDEG
                     FALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGEVL
                     WALGERDQAVDVWTQAAHLRGDKKIWRETLKRYGIALPEPSRKPRK"
     gene            8067..8648
                     /locus_tag="ACFJCW_001168"
     CDS             8067..8648
                     /locus_tag="ACFJCW_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HFC4151322.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHISSFAAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAEGTE
                     DLSRQLVGFKLPIQYLHIWAEGRRVAGAPYRIRSDGILEQYGWTIGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETPERCAARTR"
     gene            8658..9503
                     /gene="ispE"
                     /locus_tag="ACFJCW_001169"
     CDS             8658..9503
                     /gene="ispE"
                     /locus_tag="ACFJCW_001169"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HFC4151323.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGRREDGYHNIESIFCLIDLQD
                     TVYLKPRDDGKIILHNPVGGIPQEADLSYRAASLLQKYARNLAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCGLTQWRLIDLGAALGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTYEGLTRDSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSKYGSAMMTGSGACIFAAFQARNSAYNIYRQVSGLYEAYLAEGLSKH
                     PLLSV"
     gene            9511..9586
                     /locus_tag="ACFJCW_001170"
     tRNA            9511..9586
                     /locus_tag="ACFJCW_001170"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9544..9546,aa:Gln,seq:ttg)
     gene            9599..9674
                     /locus_tag="ACFJCW_001171"
     tRNA            9599..9674
                     /locus_tag="ACFJCW_001171"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9632..9634,aa:Gln,seq:ttg)
     gene            9842..10825
                     /locus_tag="ACFJCW_001172"
     CDS             9842..10825
                     /locus_tag="ACFJCW_001172"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HFC4151324.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGKTC
                     LIVDDMIDTANTLCKAAVALKERGAEGVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            10892..11464
                     /locus_tag="ACFJCW_001173"
     CDS             10892..11464
                     /locus_tag="ACFJCW_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HFC4151325.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQPVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTAVEVLALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(11590..12759)
                     /locus_tag="ACFJCW_001174"
     CDS             complement(11590..12759)
                     /locus_tag="ACFJCW_001174"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HFC4151326.1"
                     /translation="MTAHKILPVLLPIILGVSHATAASPAPNRPTVHAAPTLQTPETL
                     TAAHIVIDLQSRQTLSAKNTNTPVEPAALTQLMTAYLVFKNMKSGNIQSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALCANDAALTLADRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLGREGQVSTAKDLSLLSEALMRDFPEYYPLFSIKSFKFENIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKMAEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGHTIAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            12908..14434
                     /gene="ilvA"
                     /locus_tag="ACFJCW_001175"
     CDS             12908..14434
                     /gene="ilvA"
                     /locus_tag="ACFJCW_001175"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HFC4151327.1"
                     /translation="MNTPLPYSDYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEQEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNGTFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTNNEIAKIHIRYMVGGRTDKVGHERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            complement(14490..15566)
                     /locus_tag="ACFJCW_001176"
     CDS             complement(14490..15566)
                     /locus_tag="ACFJCW_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HFC4151328.1"
                     /translation="MSITIQNLNKKRFGNFHALKNINLNVPAGKLVSLLGPSGCGKTT
                     LLRIIAGLENADGGQILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTV
                     LPKPERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLL
                     LDEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQ
                     TGSAEAIYRKPENAFVTEFLGEADAFEGRIEKGIWHYNGFAWKLDAQYKWQEQTATGY
                     IRPHEWQIAAEHETPMIRAEIEKIHAVGALTHVLVKHGKQDVHITLAGSDAARYPIAE
                     GKKLNLIPKQVYVFSQNELIEYSI"
     gene            complement(15563..16423)
                     /gene="cysW"
                     /locus_tag="ACFJCW_001177"
     CDS             complement(15563..16423)
                     /gene="cysW"
                     /locus_tag="ACFJCW_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HFC4151329.1"
                     /translation="MKPYSANPNLTEPRRLRMLLIAAVLGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLSDPEAWSAVKLTLITALIAVPVNAVLGVAMAWLLTRFDFLGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGSRLEAQGIQIIFAIPGIVLTALFVTFPFAA
                     REIIPLMQTQGDSEEQAALILGASGWQMFWRVTLPNIKWTLLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTIPLLVEIFYNEYNFTGAFSLSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            complement(16612..17450)
                     /gene="cysT"
                     /locus_tag="ACFJCW_001178"
                     /pseudo
     CDS             complement(16612..17450)
                     /gene="cysT"
                     /locus_tag="ACFJCW_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
     gene            17636..17968
                     /locus_tag="ACFJCW_001179"
     CDS             17636..17968
                     /locus_tag="ACFJCW_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151330.1"
                     /translation="MQILSFQADIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCAMVERGEFDEVEEFDGDDDAWLEAAKDCGHH
                     GDACACGH"
BASE COUNT         4182 a         4276 c         5192 g         4409 t
ORIGIN      
        1 gaacgattcc ctaaggtgct gaagcaccga gtgaatcggt tccgtactat ttgtactgtc
       61 tgcggcttcg ttgccttgtc ctgatttttg ttaatccact atagtttaaa caactttatt
      121 tttgatttta tcccaagtat aaacctgaca atcgtattta aaagccggat ctacgcctag
      181 cttgtccact ggtatgtatg atttagacta aaaagaaatc aatcatttgc tcaattttaa
      241 gcgtctcccc gacaggttcc cctgtctcag gatcaaactc aagaaaacct gataaaaaat
      301 cattaataat caataatttt tcatcactgg aaacagtatt gtttataatt ttttccctta
      361 gtacggataa agcaaaattt tctaaagaac tatattgccc ccccatcaat ttttttagaa
      421 attaaagcaa ctatttcatt tttaatattc ataatttatc cttaagttat aaaaggggca
      481 aagccccctt tttttgatta acgaggcttt gttgcgcgat ttttcgtaaa ccgtgctttc
      541 aagaaagctg attagggcgg ggtttttgcc gtctttaagg aaggtgtggc tgatgccggc
      601 ggatatgtcg gacatccgtt tgttgcgggt tttgccgttg ccgtcgagtt tgcgttcttc
      661 gtgccacaga tagctgccgc tgccgtaaat gtcggtattg ccggtcagtc cgtagcgcaa
      721 accgagcgtg ccggcgagca tatcggtatt gctgccattt tcttgaattt cggtcggaat
      781 ggggataaac gaggttgcgt cggtttgaat gtaaaccggt gcggcaagtg cggcgcggct
      841 gttttcgcta ttcagatagg taagggaagt ttccagtttc cattttccct tgtcggtcat
      901 tatgtcttca atcgtcaagg gcaggtcggc ataagcggat aaaggcagga tggcgggcaa
      961 aaagatacgt ttcatatttc ctcttattga tattaattct tatttaataa tagtaatgaa
     1021 tatccgataa ttctgtctaa acaaattttt aaatcaaaaa aaacgatata tttgttttta
     1081 tcaattatgt tttgatatgc cgtctgaaaa gtttgtgaaa aacggttaca atccgccgca
     1141 tgaaaaaacg caataatcct cttccgctgt tgaacggtgt caaacccagt tatttggtgc
     1201 tgccgcatga aaagcagttt tacgggctgc cgctgctgca ttttctgtgc atccgctttc
     1261 cttttttggg agcggacaat tggcgcaggc ggttgaacag cggttttgtg gtcggttcgg
     1321 atggtgcggc gttggatgaa cattctttgt tcgagccggg taagacgatg ttttattatc
     1381 gggaaaccag cagtgaggat gagccgcgta ttccgtttga agaaaagatt ttgtttgtcg
     1441 atgaacattt gattgtggtg gacaagccgc attttctgcc cgttatcccc ggcgggcgtt
     1501 ttttgcggga aacgctgctc acgcgtctgc gcctgcgtcc cgaattgcag catttgaatg
     1561 ttgaagacat tacgccgatt caccgcttgg acaaggatac ggcgggtgtg atgctgctgt
     1621 cgcacaatcc tgccacacgc ggggcttatc agacgatgtt tcaaaacaaa acggtatgga
     1681 aaacgtatga ggcgcttgcg ccgacaaaga cggatttgcc gtatccgctc gatgtggttt
     1741 cgcgtttggt aaggggtgag aaatttttta cgacgcaaga ggccgaaggc gtgccgaatg
     1801 cgcacacgac ggtcgaattg attgaaaaca ggggggaatt cagcctttac cgccttacgc
     1861 cgcataccgg caagaaacac cagttacgcg tgcatatgat gggtttgggt atgccgctgt
     1921 tgaatgacgc gctctatccc gtgccgtctg aagcgggtag cgaggattat cggaaacctt
     1981 tgaagctttt ggcaaaaaag attgcgtttg cagatccttt gtcgggtcgg gaaagggtgt
     2041 tttgcagcgg gttttgcctg taatgagagg gaacgcaaac ccgtatcggc agatgccgcc
     2101 ggatacgggt ttgatattat cgatgctgtc tgaaaggggc tttatccgtt caggcatacg
     2161 ggtgcgaagc ggaggatggt gtcgcgcagg acgatgagtt tgccgtgaaa gaagtgcgtc
     2221 gaaccggcga tggtaatgac gggcaaatct tgcggttctg cccatttcag ggctttttcg
     2281 atttcgacga cctcatcttc cgcgccgtgt atcatcagcg ttttggcaac gttgggaacg
     2341 gcggacggct cggggcggtc ggtatagtgg cagactgccg caccgatgag cagcaataaa
     2401 tcgggtatgc gcacttgtgc ggcaaatgtg gcgacatagc cgccgaagga aaagccggat
     2461 aaggcaaatt ccggggcttc gggatgttgg gcgcgggcat agtcgatgac ggcgaggcag
     2521 tcttgcgttt cgccgcgtcc gtaatcatgt gtgccttcgc tgccgcctac gccgcgaagg
     2581 ttgggaaggt agcagtggaa gccgagcttg ctcaatgctt tggcggcggt ttggatgact
     2641 ttgttggtgt tcgtcccgcc ttggaggggg ttggggtggt tgatgacggc aacaccgcgt
     2701 gccggtactt gttcggacgg gatatggatg gtttctaaaa tgccggcagg gccgggtatg
     2761 tgtatggttt cgggtttcag cataatggtt tcctcttgat tttccgcata ttccgatgca
     2821 gccgcgaaga tggcggctta aaggtggaaa tgcttgccgt tgttggggtt ggacgctttc
     2881 aggccggcga gcatgcggtg gaagtccaat ccgtatgcgt tgctcagttt gtcggcacgt
     2941 tttttgagtt tgtctatgtt ttgctctttg gggctgcttt ggaaggccat taccgcgaca
     3001 ttgccgtggc tttcggcagg aagtttcaat acgcgccctt caaaaacgct caacaaccgt
     3061 tcgatgaagc gttgatagcg tttgtcgccg ctccaccagt tggtaacgaa tatgccgtct
     3121 gaagagagtg cgttgcggca gtctctgaaa aacggttctt caaccagcgt atcgatgatt
     3181 tgttcgccgt cgaatccgtc caccaagatg atatcggtgt tgtggcggaa gactttgatg
     3241 tattccgcac cgtctgcttc gataatttca aattttccgc cctcgaaagg caactcaaac
     3301 aggttgcggg caatggcgat gacctgagga ttgatgtcca cggcggtttg gcgcgtgtcg
     3361 ggcaggtagg tgtctgtcca gcgtgcaaac gaaccgccgc ccaagccgat ttgggtgata
     3421 tgttgcggca ggcgttccgc aaacagcagc cagcccatca tcgcgcggct gtaagagagc
     3481 accagctcgg acgggcggtc gaggttcatc gagctttgaa cggtgtcgct gcccaagtga
     3541 agcgaacgga tattgccttc ttcggaaata ccgacttcgg gaaagccgga ttttgcagga
     3601 cgcaggcggc ggtagggatg tcttgccatc ggtgtgaacg gtcggtttga aaggcggata
     3661 ttttatcaga atgccgatgc ttgttctgtt tcaaattaat tttgttttaa ataagatact
     3721 tagtgtattt ttatgagggg gtcgaacaaa tttcttgcca aagtgtgaag ttgcctgcat
     3781 aattcgcctt ctttgccggt atagctcagt tggtagagca cctgacttgt aatcaggggg
     3841 tcccgagttc gactcttggt gccggcacca gatttgacag cccgattgtg taaaacagtc
     3901 gggctgtttt gcatttgcgg cacggtcggt ggcagggctg cgggcatttc actataatag
     3961 cccgtttcaa actgaaaagg ccgtctgaaa agggcggggt aacaatatct gatgattact
     4021 gtgaacacac tgcaaaaaat gaaggcggcc ggcgagaaaa tcgttatgct gaccgcttac
     4081 gaatccagtt ttgccgcgct gatggacgat gccggcgtgg atgtgctgtt ggtcggggat
     4141 tctttgggaa tggcggttca ggggcgacag tcgacgctgc cggtcagcct gcgcgatatg
     4201 tgctatcaca ccgaatgtgt agcacgcggt gcaaaaaatg cgatgattgt cagcgatttg
     4261 ccgtttggtg catatcagca gagtaaggag caggcgtttg ccgccgccgc cgaactgatg
     4321 gctgccggcg cgcatatggt caaactcgaa ggcggcgtgt ggatggcgga aacgactgaa
     4381 tttctgcaaa tgcgcggaat tccggtctgt gcccacatcg gtctgacccc gcaatccgtg
     4441 tttgccttcg gcggatataa agttcagggg cgcggcggca aggcgcaggc gttgcttaac
     4501 gatgccaagg tgcatgatga agccggagct gccgtcgtac tgatggaatg cgtgccggcg
     4561 gaactggcaa aaaaggtaac tgaaactgtt tcctgtccga ccatcggcat cggggcgggc
     4621 gcggattgcg acggtcaggt tttggtgatg cacgatatgc tcggtatttt cccgggcaaa
     4681 acggcgaaat tcgtcaaaaa ctttatgcgc gggcaaagca gcatccaggc tgcggttcgg
     4741 gcgtatgttg ccgaagtcaa agccaaaacc ttccctgctg cggaacatat ttttgcagat
     4801 tgaacaaggt ctgctgccga tgccgtctga aagccgtttc agacggcatt ttgttttgcc
     4861 gtgcgcggcg cgtataatcg gcgcgttttg tcgggcagga agcccgaagg ataaggatta
     4921 ccgtaatgca aatcatacat accattcgag aactgcgcac gtggcgtgaa aatataggaa
     4981 aggtggcatt tgtgccgacc atgggcaatc tgcatgaagg gcatcttgcc cttgttcgcg
     5041 aagccagaaa acgcgccgac aacgttgttg tcagcatatt cgtcaaccgc ttgcaattcg
     5101 gtcagggcga ggatttcgac aaatatccgc gtactttgca acaggatgcg gacaaacttg
     5161 ccgccgaagg cgttgccgtt gttttcgcgc ccgatgagaa agaactctat ccgaacgtgg
     5221 aacagcgtta caacgtcgaa ccgccccatt tgcaaaacga attgtgcggc aaattccgcc
     5281 ccggccattt tcgcggcgtg gcgacggtgg tgtccaagct gttcaatatc gttttgccgg
     5341 atgttgcctg tttcggcaaa aaagattacc agcagcttgc cgtgattaaa ggtttgaccg
     5401 aggatttgaa tttcgatatc gaaattgtcc ccgtcgatac ggggcgggcg gcggacggtt
     5461 tggcactctc cagccgcaac cggtacttga gcgttgggga acgcgccgaa gcaccgcgcc
     5521 tgtaccgcga gctgcaggct gttgccgaat cgctgaagca gggcggtttg gattatgcgg
     5581 gtttggagcg gcaggctgcc gaccatttga ccgctgcggg ctggctggtc gattatgtgg
     5641 aaatccgccg cgccgatacg ctcgaaatgg cgcgggcggg agataagaaa ctggtggtct
     5701 tggccgccgc ccgtctgggg acgacgcgtc tgattgacaa tgtggaagtc ggcctgcctt
     5761 agcccgccgg agccgggaat gccgcctgaa gcggatttgc gtttcagacg gcattttgcc
     5821 gtcggctgtg cttcggaata atgtcggaaa atagacggaa tgaaataaat ttctttttgt
     5881 tcaacaaatt aaactgtcaa accaaataat aaggcaagga ttgtccggca tcgcatacag
     5941 gcaaaccgac gcaatctcaa aacacagccc tgccttcggg cgggttttgc aaatctacaa
     6001 accgtttggc ttgtgataaa gtgacgcctt gtctagatac tcaatatgcc gtctgaaggt
     6061 tcggacggat gtcggataaa ggatgattat gttacccgcc cgtttcacta ttttatctgt
     6121 cctcgcagca gccctgcttg ccggacaggc gtatgctgcc ggcgcggcgg atgtggagct
     6181 gccgaaggaa gtcggaaagg ttttaaggaa acatcggcgt tacagcgagg aagaaatcaa
     6241 aaacgaacgc gcacggcttg cggcagtggg cgaacgggtc aacagggtgt ttacgctgtt
     6301 gggcggtgaa acggctttgc agaaagggca ggcgggaacg gctctggcaa cctatatgct
     6361 gatgttggaa cgcacaaaat cccccgaagt cgccgaacgc gccttggaaa tggccgtgtc
     6421 gctgaacgcg tttgaacagg cggaaatgat ttatcagaaa tggcggcaga tcgagcctat
     6481 accgggtgag gcgcaaaaac gggcggggtg gctgcggaac gtattgaggg aagggggaaa
     6541 tcagcatctg gacgggttgg aagaggtgct ggcgcaatcg gacgatgtgc aaaaacgcag
     6601 gatatttttg ctgctggtgc aagccgccgt gcagcagggt ggggtggctc aaaaagcatc
     6661 gaaagcggtt cgccgtgcgg cgttgaagta tgaacatctg cccgaagcgg cggttgccga
     6721 tgcggtgttc ggcgtacagg gacgcgaaaa ggaaaaggca atcgaagctt tgcagcgttt
     6781 ggcgaagctc gatacggaaa tattgccccc cactttaatg acgttgcgtc tgactgcacg
     6841 caaatatccc gaaatactcg acggcttttt cgagcagaca gacacccaaa acctttcggc
     6901 cgtctggcag gaaatggaaa ttatgaatct ggtttccctg cgtaagccgg atgatgccta
     6961 tgcgcgtttg aacgtgctgt tggaacacaa cccgaatgca aacctgtata ttcaggcggc
     7021 gatattggcg gcaaaccgaa aagaaggtgc gtccgttatc gacggctacg ccgaaaaggc
     7081 atacggcagg gggacggggg aacagcgggg cagggcggca atgacggcgg cgatgatata
     7141 tgccgaccgc agggattacg ccaaagtcag gcagtggttg aaaaaagtgt ccgcgccgga
     7201 atacctgttc gacaaaggcg tgctggcggc tgcggcggct gccgaattgg acggaggccg
     7261 ggcggctttg cggcagatcg gcagggtgcg gaaacttccc gaacagcagg ggcggtattt
     7321 tacggcagac aatttgtcca aaatacagat gctcgccctg tcgaagctgc ccgacaaacg
     7381 ggaagccctg atcgggctga acaacatcat cgccaaactt tcggcggcgg gaagcacgga
     7441 acctttggcg gaagcattgg cacagcgttc cattatttac gaacagttcg gcaaacgggg
     7501 aaaaatgatt gccgaccttg aaaccgcgct caaacttacg cccgataatg cacaaattat
     7561 gaataatctg ggctacagcc tgctttccga ttccaaacgt ttggacgagg gtttcgccct
     7621 gcttcagacg gcataccaaa tcaacccgga cgataccgcc gttaacgaca gcataggctg
     7681 ggcgtattac ctgaaaggcg acgcggaaag cgcgctgccg tatctgcggt attcgtttga
     7741 aaacgacccc gagcccgaag ttgccgccca tttgggcgaa gtgttgtggg cattgggcga
     7801 acgcgatcag gcggttgacg tatggacgca ggcggcacac cttaggggag acaagaaaat
     7861 atggcgggag acgctcaaac gctacggaat cgccttgccc gagccttccc gaaaaccccg
     7921 gaaataatgc aggcccatcc tttcagacgg cataaggttt gccgggaagc cggggcattc
     7981 gggcaaacgg cacgcagttc gcacgcgttt tgcacggcac gccgcacccg tcggccggca
     8041 ggatgacacc cgttaaggaa actctgatga aacacaccgt atccgcatcg gtcatcctgc
     8101 ttttgaccgc ttgcgcgcaa ttacctcaaa ataacgaaaa cctgtggcag ccgtccgaac
     8161 acatcagcag ttttgcagcg gaagggcggt tggcagtcaa agcggaaggg aaaggttcgt
     8221 atgcaaattt cgattggaca taccaaccgc ccgtggaaac catcaatatc aacacccctt
     8281 tgggcagtac gctcggacag ttgtgtcaag acagggacgg cgcattggca gtggacggca
     8341 aaggaaatgt ctatcaggca gagggtacgg aagacttgag caggcagctg gtcggtttca
     8401 aactgccaat ccaatatctg catatctggg cggaaggcag gcgtgtggcg ggcgcgcctt
     8461 accgcatccg ttcagacggc atattggaac aatacggttg gacaatcggc agaaccgccg
     8521 acagtggggg gcaagtccga acgttgcaac tgaataacgg aaatttgaac atcaggctgg
     8581 ttttcaccga aattggaatg ccgtctgaaa ccgaaacccc ggaacgctgt gcggcgcgca
     8641 cgagataagg cggacagatg aatattgcgg acggacggca ggcgtttccc gcacctgcaa
     8701 aactgaatct cgatttgagg attaccggca ggcgtgagga cggttatcac aatatcgaaa
     8761 gcatattctg cctgatagat ttgcaggata ccgtatattt gaaaccgagg gacgacggca
     8821 aaatcatcct gcacaatcct gtcggcggaa taccgcagga agccgatttg agctaccgtg
     8881 ccgcatcgtt gctgcaaaaa tatgcgcgca accttgccgg cgtggaaata tggctggaca
     8941 aaaaaatccc gaccggcgcc ggcttgggag gggggagttc cgatgccgca acggttttgc
     9001 tggtgttgaa ccgttggtgg cagtgtggtt tgacgcagtg gcggctcatt gatttgggtg
     9061 cggctttggg tgcggacgta ccgtttttta ttttcggaaa aaatgctttt gcaagcggga
     9121 taggtgaaaa actgatagga atggatattc cgaaacagtg gtatgttatt gtcaaacctc
     9181 ccgtccacgt ttccaccgca aaaattttca catacgaagg cttgacacgg gattctgcct
     9241 caagcataat gccgactttc caaaacctgc aaccgttcag aaacgatatg caggcagtgg
     9301 tatttaaaga ataccctgaa gtttggaaag cttattccga gttgtcgaaa tacggttctg
     9361 caatgatgac cggctcagga gcctgtatat ttgcagcatt tcaagctagg aatagcgcat
     9421 acaatatata ccgacaagtt tcaggtttgt acgaggcata tttggcagag ggtctttcaa
     9481 aacatccttt gttgtccgta taaacattgt tggggagtcg tcaagcggtt aagacactgg
     9541 attttgattc cagcatgcga aggttcgaat ccttcctccc cagccaagcc aaacaagttg
     9601 gggagtcgtc aagcggttaa gacactggat tttgattcca gcatgcgaag gttcgaatcc
     9661 ttcctcccca gccagacaaa agcgtgtaag cctgcttaca cgctttttat ttcatagaaa
     9721 taaaaatatt gaaacgcctt tgtttgtgtc ggatgttgca ggtataatgc cgggcttggt
     9781 acaagcggag ggaagcattg tgttttctga gcggaagtta aacataaaat caggtgagaa
     9841 tatggctgcg tacgacagtt tgatggtatt tacaggcaat gccaatcccg aattggcaca
     9901 acgtgttgtc aggcatttgg acatttcttt gggcaatgct tccgtatcca agttttcaga
     9961 cggcgaagtt gccgtcgaac tgttggaaaa cgtacgcggg cgcgacgttt tcatccttca
    10021 gccgacctgt gcgccgacca atgacaacct gatggaaatc ctgacgatgg cggatgcact
    10081 gaagcgtgct tcggcaggtc gtattaccac agccattccg tatttcggct atgcgcgcca
    10141 agaccgccgt ccgcgttccg tccgcgttcc gatttctgcc aaactggtgg caaatatgct
    10201 gtattcggca gggatcgacc gtgttttgac tgtcgatttg catgccgacc agattcaagg
    10261 tttcttcgat attccggtgg acaatattta tgccactccg attttgttga acgacatcaa
    10321 gcagcagcgg attgaaaatc tgaccgtcgt cagcccggac atcggcggtg tcgtccgcgc
    10381 ccgcgccgtg gcaaaatctt tgaatgccga cttggcaatc atcgacaaac gccgcccgaa
    10441 agccaatgtg gcggaagtta tgaacatcat cggcgatatt caaggcaaaa cctgtctgat
    10501 tgtggacgat atgattgaca ctgcaaatac gctgtgcaaa gccgccgtcg ccttgaaaga
    10561 gcggggggcg gaaggtgttc tagcctatgc cagccacgcc gtattctccg gagaggcggt
    10621 cagccgtatt gcctcatccg aaatcgacca ggtggtcgta accgatacca ttcctttgtc
    10681 tgaagcggct aaaaactgcg accgtatccg tcaggtaacg attgcaggtt tgttggccga
    10741 aaccgtccgc cgcattagca atgaagaatc cgtctcatat cttttcaatg aagaagtgat
    10801 gacaggcagc atgttgctgc cgtaaccccg atgccgtctt aagctggtcg cggccgatga
    10861 cggcgatttt acctaacttg gagtatttaa catgacttat gaaattcaag cctctgttcg
    10921 tgaagcacaa ggcactggtg cgagccgccg cctgcgtcgc gaaggccaaa tccccggtat
    10981 tctgtacggt gaaggtcaag agcctgttgc cattgccgta gatcacaaaa ccgtatttta
    11041 cgcattggaa aaagaatctt tccatactgc gttgattaaa ttgtctctga acggcgaaac
    11101 caaagacgtt atcgtccgcg atttccaaat gcacccgttc cgccgcgaag tccaacacat
    11161 cgacttccaa gctgtgaaag ccgatcaacc cgtacgcatc cgcgttcccc tgcacattgt
    11221 taacgctgaa aattctcaag ccgttaaatt gcaaggcggt cgcgtatctc tgctgaacac
    11281 ggctgttgaa gtgcttgcgt tgcctgccaa tatccctgct ttcttggatt tggattgtgc
    11341 cgaagtggtt gccggcgaca ttttgcactt gtcagacatc aaactgcctg aaggtgtaga
    11401 aagcgtttcc ctgaaacgta acgaaaatct ggctgttgct accgttaccg gtaaaaagcg
    11461 ctaacttact tccatcagca gggcggcgcg tatgcaatac gtaccgccct gttgttttat
    11521 gccgtctgaa ccgtgtttca gacggcattt ctttatttgt tggaaaagcg ggatatttga
    11581 aacggcagat tactgccctg tcagacgcgt ccaaagcctt tgccaccggc ttcttttttc
    11641 tacgttttcc agtgcgacga tttctttttc ggcaatggta tgtccgtttt gcctgatttt
    11701 gatttttcct aaaatctgcc ctttttttac cggggcggga atcggctgta tggtttccaa
    11761 aatctgttct gccattttcg cttctttatg tggcagagtg atgtaggctt ctttgaggaa
    11821 gcctgcgcgg acggtttttt tgctgcctcc ggaaatttgg atttgggcaa cggttttgcc
    11881 tttcggatat attttgggcg tatcgaaggc ctgcaatgcc cggttcagca gcttgctgtt
    11941 gtccgatgcg cgggtttccg ccgattccga acctagtgtg atgacaagga tgtgcctgcc
    12001 gttgccggag tatgacacgg caaggttgta gccgccgctt tctgtgtgcc cggctttcag
    12061 gccgtttaca ttgttgtccc tatataaaag gatattgcgg ttgttttgtt ctatgttttc
    12121 aaacttgaac gatttgatgg aaaacagcgg gtaatattcc ggaaagtcgc gcatcaatgc
    12181 ttcagacagc agggagaggt ctttggcggt ggaaacctgt ccttctctac ccaagcctgt
    12241 cgggtttttg aatacggtgt tcttcatgcc caagcgtcgg gcttctttgt tcatttgttg
    12301 cacaaaattt tcaatcgagc cgttgcccag ccggtcggca agggttaggg cggcatcgtt
    12361 tgcgcatagg gcaatcatgc cttttaagag tttgtcggtg ctgaccgtat cgccgggacg
    12421 tacaaacatt ctgcttcctt ctgaagccca tgcggattcg ggtattttta agttttcttc
    12481 agattggata tttcccgatt tcatgttttt gaaaaccaaa tatgcggtca tcagttgggt
    12541 tagtgccgcc ggttcgacag gggtattggt gtttttggcg gataaagtct gcctgctttg
    12601 aaggtcgata acgatgtgtg ccgccgtgag ggtttcgggt gtttggagcg tgggggcggc
    12661 gtgtaccgtc ggtctgttgg gcgcgggcga tgcagccgtt gcgtgagaaa cgcctaagat
    12721 gatgggaaga aggacgggca ggattttatg tgctgtcatg aaatattcta aattgtgtga
    12781 gtgtttcagc ctgccgatta tacgcttagg gtgtctgatc gggcggattt ttcttgcttt
    12841 cgcgccgtct tgggcgtatg gttttgggtt ttgcgatttt aataaaccga ttatcccgca
    12901 ttgaattatg aacacgcccc ttccttattc cgattacctc atccgcatcc tgacggcatc
    12961 tgtctatgat gtagcggtcg aaacgccttt ggaaccggca cgcagccttt ctgtacgttt
    13021 gaaaaacaac atccttttga aacgcgaaga tttgcagccg gttttttcgt tcaaaatacg
    13081 cggcgcgtac aacaaaatgt ccaagttgcc gaaagatgcg ctcgcttgcg gcgtgattgc
    13141 ggcaagcgcg ggcaatcacg cacaaggcgt ggcgttgtcc gcacagcgtt tgggctgccg
    13201 tgccgttatc gtcatgccgg agactacgcc gaaaattaaa gtggatgcgg ttaaaagccg
    13261 tggcggcgag gtggttttgc ggggtgtttc atacaacgat gcctacgatt atgcgatgga
    13321 gctggcggaa caggaagggc tgacctatat cgcgccgttt gacgatcccg atgtgattgc
    13381 gggacagggg acggtgggga tggaaattgt cagccagcat cccgatccaa tccgcgccgt
    13441 attcgtaccg atagggggcg gcggtttggc ggcgggcgtg gcggcattta tcaaacaggt
    13501 tcgtcccgaa attaaagtta tcggcgtaca gaccaacgat tcctgctgta tgaagcagtc
    13561 ggtcgaagcg ggcgaaatcg tccatttgaa agatgtcggg ctgttttcag acggtacggc
    13621 ggtcaaagtc gtcggaaacg gaaccttccg cctctgcaaa gaacttttgg atgaaatcat
    13681 tacagtcgat accgatgcgg tttgcggcgc ggtcaaggat attttcgatg acacgcgcag
    13741 cattaccgag ccggccgggg cgttggcgtt ggcgggtctg aaagcctata ttgcccgaga
    13801 aggtgcggaa aaccaaaccc tgattgccgt taccagcggt gcgaatatga attttcaccg
    13861 tttgcgccac gtttcggaac ggagcgaatt gggcgagggc aacgaaggta tttttgccgt
    13921 taccatcccc gaagaacgcg gcagcttcct taagtttgtc aatatattgg gaaataggaa
    13981 tattaccgag ttcaactacc gctacggcga cgatgaaaaa gcgcatatct ttgtcggact
    14041 tcaagcggca ggcccgcagg atttggcggt tatcggcagc cggttggatg aggcgggatt
    14101 gcccaatgtc gatttgacca ataatgagat tgccaaaatc catatccgct atatggtcgg
    14161 agggcggacg gacaaagtag ggcacgagcg tctggtcagt tttgagtttc cggagcgtcc
    14221 gggcgcgttg gcgcgctttt tgaaccatat gcagggcggt tggaacatta cgctcttcca
    14281 ttaccgcaac cacggtgcgg attacgggcg gattttggtc ggtatcgacg tgccgccgca
    14341 cgatgccgcc gcatttgacg gtttcttgga aagtctggga tacagctatc acgaggaaac
    14401 gcaaaatgcc gcgtacaagc tgtttcttgc ctgacgtttg acacgcaatg ccgtctgaaa
    14461 gcctttcaga cggcattgcg ctttcagggt taaatcgaat attcaatcaa ctcgttttga
    14521 gaaaaaacat aaacctgttt cggaattaag tttaattttt tgccttcggc gattgggtag
    14581 cgcgcggcat cgctgccagc cagtgtgata tgcacgtctt gtttgccgtg tttcaccaaa
    14641 acgtgcgtca atgcgccgac ggcgtggatt ttttcgattt cggcacggat catcggggtt
    14701 tcgtgttcgg cggcgatctg ccattcgtgc gggcggatat agccggtggc ggtttgctcc
    14761 tgccatttgt attgcgcgtc caatttccac gcgaagccgt tgtaatgcca gatgcctttt
    14821 tcgatgcgtc cttcaaatgc gtcggcttcg ccgaggaact cggtaacgaa ggcgttttcg
    14881 ggtttgcggt aaatggcttc ggcactgccg gtttgttcga ttttgccatg gttcatcacg
    14941 acgatttcgt cggaaacttc gagggcttct tcttggtcgt gagtcaccag aatgctggtt
    15001 acgccgaggt tgtgatgaat gtcgcgcagc caggtgcgta attctttgcg cactttggca
    15061 tccagcgcgc cgaagggttc gtccaaaagc aggagtttcg gttcgaccgc aagcgcgcgg
    15121 gcgagggcga tgcgctggcg ttgcccgccg gagagttggt gcggatagga tttggcgagg
    15181 tgggagagtt gtacgagttt gagcaattct tcgactttgg cgcggatttg tcctttggac
    15241 gggcgttcgg gcttgggcaa tacggtcaaa ccgaaagcga cgttgtcaaa cacattcatg
    15301 tggcggaaga gggcgtagtg ttggaacacg aaaccgactt tgcgctcgcg cacatgcttg
    15361 gcggttacgt cttggccgtc aaagagaatt tggccgccgt cggcgttttc cagtccggcg
    15421 ataatgcgta aaagtgtggt tttgccgcag ccggagggac cgagcaggga aacgagtttg
    15481 ccggcgggga cgttgaggtt gatgtttttc agcgcgtgaa aattgccgaa gcgttttttg
    15541 tttaagtttt gaatggtaat actcatactg cgttcctttc ggcggcggcg agttttttgt
    15601 cttgtaattt ggtgatgatg ttctgcaccg ccagcgtcgc cagtgctaaa agtgccaata
    15661 cgccggagag ggagaatgcg ccggtgaagt tgtattcgtt gtagaagatt tcgaccaaaa
    15721 gcgggatagt gttggtttcg ccgcgtatgt gtcccgatac cacgctgacc gcgccgaact
    15781 cgcccatcgc acgggcgttg gtgaggatga tgccgtagag cagcgtccat ttgatgttgg
    15841 gcagggtaac gcgccaaaac atctgccaac cgcttgcgcc gagtatcaat gccgcctgtt
    15901 cttcgctgtc gccctgtgtc tgcattaaag ggatgatttc gcgtgcggca aagggaaagg
    15961 taacgaacag cgccgtcaaa acaatgccgg gaatggcgaa gataatctgt atgccttgcg
    16021 cttccagccg gctgcccaac gccgtgtgcg cgccgaacaa taagacgaac atcaaaccgg
    16081 caaccacggg cgatacggag aacggcaaat cgagcagggt ggtcagcaac tgcttgccga
    16141 gaaagtcaaa acgggtcaac agccacgcca tcgccacgcc caagacggca ttgacgggaa
    16201 cggcaatcag cgcggtaatc agcgtcaatt tgacggcaga ccacgcttcg ggatcgctta
    16261 aggatttcag gtacaaatcc caaccgcctt ttaaggcttc gtagaatacg gcgacgagcg
    16321 gcacgaccag catcagcagc agaaagccca gcacggcggc aatcagcaac atgcgcagcc
    16381 ggcgcggttc ggtcaggttg ggattggcgg aatagggttt catggcggtg gtgttctctg
    16441 gtttgttgtt taaggtgttc ggatgccgtc tgaaagggat tgaggggttt cagctttcgt
    16501 cggtcggatt cttgaatccg acaaggttgc tgaatcgcaa atgtttgtcg gatacaagta
    16561 tccgacctac gaattctgtg ttttggggag cggattcgtt ttcagacgac ctcaaccctt
    16621 cgcacccgaa cgcctgccca acgcccactg cagcacgttc agcgcaaaca gaatcacaaa
    16681 cgaaaccagc agcataaaca acgccaccgc cgacgcgccc tgcgcgtcga attgttccag
    16741 cttgcccgta ataatcagcg gcaggatttc ggaaatcatc ggaatgctgc ccgcgataaa
    16801 aatcaccgaa ccgtattccc ccgttgcccg cgcgaacatc atgcccgcgc cggtcaagag
    16861 tgccggcgtg atttccggca gcagcacgcg gcggaacgtt gtgaaacggt ttgcgcccaa
    16921 agtcgccgcc gcttcctcat attcgcccga caattccttc aataccggct gcacggcgcg
    16981 gacgataaag ggcaggctga cgacaaccag cgcaatccaa atgccgacgg gcgtaaacgc
    17041 gattttgatg cccaaaggtt cgaaaaaacg gcctatccaa ccgttgggcg catacagggc
    17101 cgccaacgcg atacccgtaa ccgccgtcgg cagcgcaaac ggcaaatcaa ccagcgcgtt
    17161 cgccaggccc ttgcccggaa attcatagcg caccaacacc caagccacca gtgtgccgaa
    17221 cacgacacat tggtcagcat cgcataaaac gacatccgca aactcagccg caccgccgcc
    17281 agcacgttcg gctcggcaat cgtgttccga aagccgcccc agccgatttc cgccgccttc
    17341 gccgccatca tcgcaaacgg caaaaccacc aaaagcgaaa agcacaatac ggtcagaccg
    17401 aggctgagtt tgaagccggg cagtacgccg ggtgttttga gcggtaacat aaaacaatgc
    17461 tgaaaataag gaaaaggaag gactacttta acgatgccgc ctgaaaaacg gaaaaaatgg
    17521 aaagtttggt gcaaagacga atttgttata aagcggttgg cagtttttca agcgggcgcg
    17581 atgttctaaa ataacgcttt gttttgacgg aaaaccatca tataaaggaa cacttatgca
    17641 gattttatct tttcaggcgg acattgcgga acgtatgctg gaaggtacgg aaggcgagtc
    17701 ggtcaacgaa aacgcacaat ttgtccgtac ggacaacggc tattggattg cgtggcatga
    17761 aggcgtggcg gcactgcttg cgcccgatac gccgccgggc attccctgtt tttgggtgga
    17821 aggggcggaa agccttgaag agttgtgtgc gatggtggaa cgcggcgagt ttgacgaagt
    17881 ggaagagttt gacggcgatg acgacgcgtg gctcgaagcg gctaaagatt gcggacacca
    17941 cggcgacgct tgcgcctgcg gacattaaag gcatggcagg cttgccgcaa ggggtgcaag
    18001 gctttgccgt tttttaaata atcggcggat tgcatctgtt tgcaatgggc ggaacgctt
//
LOCUS       DAXGCP010000040        17578 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.040, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000040 DAXGCP010000000
VERSION     DAXGCP010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17578
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.040"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..101)
                     /locus_tag="ACFJCW_001180"
     CDS             complement(<1..101)
                     /locus_tag="ACFJCW_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC4151331.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVE"
     gene            complement(220..1320)
                     /locus_tag="ACFJCW_001181"
     CDS             complement(220..1320)
                     /locus_tag="ACFJCW_001181"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HFC4151332.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRKLLDLQDTGTDELHRSRMLSQELSRLYAQTAAELLCSQNLAPCDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAELTRIFTVGDFRSRDLAAGGQGAPLVPAFHEALFRDDRE
                     TRVVLNIGGIANISVLPPGAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGAKAAQGNI
                     LPQLLGRLLAHPYFSQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVC
                     DAVSHAAADARQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            1645..3219
                     /locus_tag="ACFJCW_001182"
     CDS             1645..3219
                     /locus_tag="ACFJCW_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HFC4151333.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTD
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASRKGLPVSTTHAIIGGIVGSA
                     LCMAFTHNADGVALIRWGKLGEIGMSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGTMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQSAVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSMASYLILQAVF"
     gene            3233..3421
                     /locus_tag="ACFJCW_001183"
     CDS             3233..3421
                     /locus_tag="ACFJCW_001183"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151334.1"
                     /translation="MPSEPVFRRHFVDGMCGLVPYAQSVLSGYAVWYLGFGTVGHKGY
                     DMPPPVLENTYPRQQNAV"
     gene            complement(3459..4880)
                     /gene="hemN"
                     /locus_tag="ACFJCW_001184"
     CDS             complement(3459..4880)
                     /gene="hemN"
                     /locus_tag="ACFJCW_001184"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HFC4151335.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKVLHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADTYIK
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPSGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSVGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPGDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            5015..5749
                     /gene="fnr"
                     /locus_tag="ACFJCW_001185"
     CDS             5015..5749
                     /gene="fnr"
                     /locus_tag="ACFJCW_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HFC4151336.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNEFSQLDAVIRQSR
                     RLKKGEYLFRAGGAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSYV
                     HSCDAVALENSEVCELPFTHIEELGQNIPSLRTHFFRMISREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            complement(5862..6812)
                     /locus_tag="ACFJCW_001186"
     CDS             complement(5862..6812)
                     /locus_tag="ACFJCW_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HFC4151337.1"
                     /translation="MKLQQLKYALEVYRHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIAQMVTSGESDLAIVTERIDDHPELGR
                     LSCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFAKARLE
                     RPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            7176..7886
                     /gene="rmpM"
                     /locus_tag="ACFJCW_001187"
     CDS             7176..7886
                     /gene="rmpM"
                     /locus_tag="ACFJCW_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HFC4151338.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFD
                     KDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANNLV
                     SNGVPASRISAVGLGESQAQMTQVCQAEVAKLGAKASKAKKREALIACIEPDRRVDVK
                     IRSIVTRQVVPARNHHQH"
     gene            8661..9617
                     /gene="thiL"
                     /locus_tag="ACFJCW_001188"
     CDS             8661..9617
                     /gene="thiL"
                     /locus_tag="ACFJCW_001188"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HFC4151339.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEGLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTCIGKINGGCRLKVLDAGGRELELHSLGFDHFG"
     gene            9610..10095
                     /locus_tag="ACFJCW_001189"
     CDS             9610..10095
                     /locus_tag="ACFJCW_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HFC4151340.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLVPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFVCIVLFMWGIRICACAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPPPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(10155..11831)
                     /gene="ettA"
                     /locus_tag="ACFJCW_001190"
     CDS             complement(10155..11831)
                     /gene="ettA"
                     /locus_tag="ACFJCW_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HFC4151341.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGT
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWD
                     AKIGNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKPKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDGLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKIARQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVETLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGAKPKRIKYKPVTR"
     gene            12067..13421
                     /locus_tag="ACFJCW_001191"
                     /pseudo
     CDS             12067..13421
                     /locus_tag="ACFJCW_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
     gene            13425..14386
                     /locus_tag="ACFJCW_001192"
                     /pseudo
     CDS             13425..14386
                     /locus_tag="ACFJCW_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
     gene            14569..16827
                     /locus_tag="ACFJCW_001193"
                     /pseudo
     CDS             14569..16827
                     /locus_tag="ACFJCW_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
     gene            16840..17482
                     /gene="pgmB"
                     /locus_tag="ACFJCW_001194"
                     /pseudo
     CDS             16840..17482
                     /gene="pgmB"
                     /locus_tag="ACFJCW_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
BASE COUNT         3812 a         4566 c         4910 g         4290 t
ORIGIN      
        1 tgttcgacgg caaagcgttt gccgccgccg tgggcgggta tgccggtcag tgtgccgcag
       61 gcggtgagta cgagggggat gaggaggagc agggttttca tggcagggtt tgttttgttt
      121 tgaacgggtt tgagtgtaaa tggattttaa gggtttgtaa acgaaagggg tggaaatgcc
      181 gtctgaacgg cggaaatggc tttcagacgg tatttgcgct caataataat atcccgcgcc
      241 cagaatacac ggtttggatg cgccggtcgc tttgtgcgga ctaccgggaa tgcggttaat
      301 ccaacacgcc gccaaccacg caaatgcggc tgcctccacc cattgaggat cgaggttcag
      361 ttcggcggtg ctgtgcaggg aaacgcgtgt gccgaaacat tctgccaaat ccgccattaa
      421 aacaggattg cggatgccgc cgccgcaaat gtacatttga cgggcatctg ccgctgcgtg
      481 tgagacggcg tcgcaaacgg tttgcgcggt gaatcgggaa agcgtccgca atacgtcgta
      541 tcggttttcg ccgccgtcaa ggtaggtttc gagccaattt agggcaaaca gttcgcgccc
      601 cgtgcttttg gggtggggtt gtgagaaata cgggtgggcg agcagcctgc cgagcagttg
      661 cggcaatatg ttgccttgtg ccgcctttgc accgtttttg tcgtaaggca gctgccagtg
      721 tgcctgcgtc cacgcgtcca tcagcatatt gcccggccct gtgtcgaagc cgaaggcggg
      781 tgcgccgggg gggagtacgc tgatgttggc aatcccgccg atgttcagta ccacgcgtgt
      841 ttccctgtca tcgcggaaca gggcttcgtg aaaggcgggg acgagcggcg caccttgtcc
      901 gccggcggca aggtcgcggc tgcggaagtc gccgacggta aaaatccgcg tcagttccgc
      961 cagcagcggc aaatcggcaa gctgtatgct gtaaccgtgt tccggcgcgt gtcggacggt
     1021 ttgcccgtgg cagccgaggg cggtaatgtc gcacggagcg aggttttgac tgcacagcag
     1081 ttcggcggcg gtttgcgcgt acaggcggct gagttcttgc gacaacatcc tgctgcggtg
     1141 cagttcgtct gtgcctgtgt cctgcaaatc cagcaatttg cggcgcaacc ggtcagggta
     1201 gggggtaaag gcgtgccctt ccgcgcccag ccatttgccg ccgtccatcc gtaccagcac
     1261 ggcatccgcc ccgtccatac tggttcccga cataatgccg atgtaaagct gtgtttccat
     1321 catcactccc aaactggtgc aaaacgccat tttaacgtgt attgacgctc gtataccgat
     1381 ttgccgccgc agtgtaaata aagtgtaaat aaatgtttta agacgggtgg aaaaatatta
     1441 taatgcgccc gcaacatcca gtagtagaag tgtcatacaa accgtttccg gcagcagttt
     1501 tgcattcggt caggtttggg ggtattcgga tgcggttcag aaggaaggat gcgtctgcca
     1561 tatcccgaaa cggcagttcg accggaggca gcaatacagt gtcggcaaca ctcatgattt
     1621 ccaccacatt aaaggaagat tgccatggct caaatccaaa tgagcgcaaa tgttaaaacc
     1681 atcaacgccg tctttgccgc catgctggta ggtacagtcg gctattttat ttattggggc
     1741 ttgggttata cccattacaa ttacgccgcc ttattcatta ttgccacgat gttcggtgtg
     1801 tttatggcgt tcaacatcgg cggcaacgat gttgccaatt ctttcggcac cagcgtcggt
     1861 gcaggcacgc tgaccatccc gcaggctttg ctgattgcgg cggtatttga ggtcagcggc
     1921 gcggtcatcg cgggcggcga ggtaaccgat accatacgca aaggcatcgt cgatttgaag
     1981 ggtgttgatt tcgaacccat acagtttgtg tttattatga tgtccgcgct tttggcggcg
     2041 gcgttgtggc tgctgttcgc gtcccgcaaa ggcctgccgg tttcgacgac gcacgcgatt
     2101 atcggcggca tcgtcggcag tgcgttgtgt atggcgttta cgcataatgc ggacggggtg
     2161 gcgttgatac ggtggggcaa gctgggcgaa atcgggatgt cttgggtatt gtcgcccgtg
     2221 ttgggcggcg cggtgtccta tttcctgttt tcgcgcgtca agaaaaacgt cttagattac
     2281 aacgcttggg cggaaggaac gctcaagggc atcaagcagg aaaaaaaggc ctataaagaa
     2341 cggcaccgcc tgtttttcga gggtttgtcc gaagccgaaa aagtcgagta cgccaccaaa
     2401 atggcgcacg acgcgcaaat ttacgacgaa cccgaattcg atcctcaaga gctgcaatcg
     2461 gagtattacc gcggtcttta tgcgttcgac aaccgtaaaa acaatgtcga ttcctacaag
     2521 gcgctgcatt cttggattcc ctttatcgct tcgttcggca cgatgatgat ttccgctatg
     2581 ctgattttca agggcttgaa aaacctgcat ttggggatga gcaacgtcaa cagcttcctg
     2641 accatcttta tgataggcgc ggcggtgtgg atggggacgt ttgtgtttgc caaaagcctc
     2701 aagcgtaaag acttgggcaa atcgaccttt cagatgtttt catggatgca ggtctttacc
     2761 gcctgcggct tcgcattcag ccacggtgcg aacgatatcg ccaacgccat cggcccgttt
     2821 gccgcgatta tggatgtttt gcggacgaac agcgttgccg cgcaaagcgc cgtccctccg
     2881 attgcgatgc tgactttcgg catcgcgctg attgtcggtt tgtggtttgt cggtaaagag
     2941 gtgattaaaa ccgtcggtac gagtttggcg gaaatgcatc ctgcttcggg ttttaccgcc
     3001 gaactgtccg ccgcatccgt cgtgatgggc gcgtcgctga tggggctgcc cgtgtccagt
     3061 acgcatatct tggtcggcgc ggtactcggt atcggtctgg tcaaccgcaa tgccaactgg
     3121 aaactgatga aacccatcgg tttggcgtgg gtcattaccc tgcctgccgc cgctgtattg
     3181 tcgatggcca gctatttgat tttgcaggca gtgttctgat tgtaaaatac tgatgccgtc
     3241 tgaacccgtg ttcagacggc attttgttga tggaatgtgc gggcttgtgc cttatgcaca
     3301 atctgttctg tcgggatatg ctgtttggta tcttggtttc ggaacggtcg gacacaaagg
     3361 ttatgatatg ccgccgcctg ttcttgaaaa cacttatcct cggcagcaaa atgccgtctg
     3421 aaaaagcctt tcagacggct tttgtacgtt agccgcaatc acaccgtttg cgaatatttc
     3481 gctttggttt ctttgtggcg caggtggtag tcgaagacca tggcgatgtt gcggatgagg
     3541 aagcgtcctt tcggtgtaac ggtcagcccg tggctgttca ggcgcaccaa tcccaaaccg
     3601 gcgagttttt ccaaatccgc cagttcgtct ttgaagtagc ggtcgaacgg gatgccgaac
     3661 atactttcgt aaatcctgta gtcgagcgcg aagcggcaca ttaaatcctg aatgatgttg
     3721 cggcgcagga tgtcgtcctg attgagctgg tagccgcgca tgatgggcag tctgccttcg
     3781 tcgatggcgg catagtaggc atcgatgtcg cgttcgtttt gggaataggt gctgccgatt
     3841 ttgccgatgg acgacacgcc gatggcgacc aaatcgcaat ccgcgtaggt cgaatagcct
     3901 tggaagttgc gttggaggaa gccttctttg agggcgatgg agagttcgtc gccaggtttg
     3961 gcgaaatggt ccatgccgat gaagacgtag ccgcgctctg tcagggtttg gacgcagtat
     4021 tgcagcatat cgagcttctc ttcgctgtcg gggacggcgg cggtatcgat gcggcgttgc
     4081 ggtttgaaca cgtgcggcag gtgggcgtag tggtaaaggg cgaggcggtc gggatcgagc
     4141 gacaaaacgg tatctatggt ggttttgatg ctttcggaag tctgatgcgg caagccgtaa
     4201 atcaaatcga cgctgacgga tttgaaccct gcctcacggg cggcatcgat gacttctttg
     4261 gtttcttcgt agctttggat gcggttgact gccgcctgca ctttggggtc gaaatcctga
     4321 atgccgacgc tcatgcggtt gaagccgagt ctgccgagca tgaggacggt gtcgcggctg
     4381 actttgcgcg ggtcgatttc gatggaatat tcgccggacg gtatcagttc gaaatgtttg
     4441 cggatcatgc ggaagacacg ttcgatctgt tcgtcgctca aaaaggtcgg cgtgccgccg
     4501 ccgaagtgca gttgggcaag ctggtgccgt ccgttcagat gtggagcgag cagttccatt
     4561 tctttttcaa gatatttgat gtaggtatcg gcgcggcttt tgtctttggt gatgattttg
     4621 ttgcagccgc agtagtagca gatggtgttg caaaacggaa tgtgaatgta aagggaaagc
     4681 ggtttgttta acgcgcccat accgcgcaaa tgtaaaactt tgatatattc gccttcgcgg
     4741 aaaccgtcat ggaaacggtc ggcggtaggg taggaagtat agcgcgggcc gctggcgggc
     4801 aggctggcaa tcagcgcgcg gtcaaactcg gggcggtcat cgtttacatt gtgattgttc
     4861 tgtatctgaa tgattttcat ggtgtgtgtg cggttttatg atgttagtca aattttggat
     4921 agtttggtag aatgccacag tatgataaac ctgtcttgat atgtgtcaac aagcacataa
     4981 tcgggatggg gcaaaacaca cgaaaaggta cggtatggct tcgcataata ctacacatca
     5041 gatgaaaacg ctgtgttctt cctgttcttt gcgggaactc tgcctgcctg tcgggctgct
     5101 gcccaacgag ttcagccaac tcgatgccgt catccgccaa agccgccgcc tgaaaaaagg
     5161 cgaatacctg ttccgtgccg gcggagcctt tacctcgctc tttgccatcc gttcgggctt
     5221 cttcaaaaca accgtcgcca gtcaggacgg ccgcgatcag gtaacgggtt tctttatgtc
     5281 gggcgaactc atcggcatgg acggcatctg ttcctatgtg cacagttgcg acgcggtcgc
     5341 cttggaaaac agcgaggtat gcgagttgcc gtttacccat atcgaagagc tcggtcagaa
     5401 tatccccagc ctgcgtacac actttttccg catgataagc cgcgaaattg tgcgcgatca
     5461 aggtgttatg ctgttgttgg gcaatatgcg cgccgaagaa cggattgccg ccttcctgtt
     5521 gaacctttcc caacgccttt attcccgagg tttcgccgcc aacgacttca tcttaagaat
     5581 gtcccgcgaa gaaatcggca gttatctcgg gctgaaactt gaaaccgtca gccgcacatt
     5641 atccaagttc catcaggaag gattgatttc cgtcgaacac aaacacatca agattctcaa
     5701 tctgcaggtg ctgaaaaaaa tggtatccgg ttgttcgcac gccatttgat taacctgtac
     5761 gaacatttca gacggcattc tcaataaaca cagggcagac gaaaacatct gccctgtttg
     5821 ttgtatctgc cgcaaagtgc cgcctgaaaa ccggcagccg cctaaatcga aaaatcctcg
     5881 ctgatgggcg tgtacagaat cctatccacc ttctcgcgtg tcaggtgcgg cgcaaacgct
     5941 tggataaagt cgtaggcata tccgcgcaaa taagtatcgc tgcgcaaagc tatccacgtc
     6001 ggcgacggct cgaacaggtg tgccgcatcc acaagctgca aatcgccgtc cgtatccggg
     6061 ttgtatgcca ttttcgccat cagtcccacg cccaaaccca agcgcacata agtcttcaat
     6121 acatccgtat ccgccgccgc caatgcgaca tccggccgtt ccaaacgggc tttggcgaat
     6181 gcccgcgcga tgctgctgcc cgcattgaat gcaaattcat aagtaatcag cggaaacctc
     6241 gccaaatctt caatacggag gggattcctg cattcgagca gcggatggtc gttcggcaca
     6301 atcaccgcgt gtgtccagtc gtagcaggaa agccttccca actcggggtg gtcgtctatc
     6361 cgttccgtaa caatcgccaa atcagattct cccgaagtaa ccatttgggc gatggcggca
     6421 gggcttccct gtttgatggt cagattgact ttcggatagc gtttcacaaa atcggcaaca
     6481 atcaacggta gggcatagcg cgcctgcgta tgcgtcgtgg caaccgtcag cgaaccgctg
     6541 tcctgtccgg taaactcgct gccgatattt ttaatgttct gtacatcgcg caaaatacgt
     6601 tccgcaatat ccaaaaccac cttgcccggc tgcgagaccg aaaccacgcg cttgccgctg
     6661 cggataaaaa tctgaatgcc gatttcttct tccagcaatt tgatttgttt ggagatgccg
     6721 ggttgtgatg tgaataaggc ttcggccgct tcggaaacgt tcaggttgtg ccggtaaact
     6781 tctaaggcgt atttcaattg ttgtaatttc atggcgggtc ggtgtgggtc tgtgtcgggt
     6841 ggctgaacat tgtttataat ttatcatatt ttcttgccgg tacggtatgg ggctttgccg
     6901 ttgtgtttgt tgtttttgtg caacggcaat cgtgcgatat ggaaaaaatc cccctaaagt
     6961 aatgacacgg aattgatttt tcggcatgat agactatcag gaaacaggct gttttacggt
     7021 tgttttcagg cgttgagtat tgacagtccg ccccctgttt ctttatagtg gagactgaaa
     7081 tatccgattt gccgccatgt ttctacagcg gcctgtatgt tggcaattca gcagttgctt
     7141 ctgtatctgc tgtacaaatc taatgaggga ataaaatgac caaacagctg aaattaagcg
     7201 cattattcgt tgcattgctc gcttccggca ctgctgttgc gggcgaggcg tccgttcagg
     7261 gttacaccgt aagcggccag tcgaacgaaa tcgtacgcaa caactatgga gaatgctgga
     7321 aaaacgccta ctttgataaa gcaagccaag gtcgcgtaga atgcggcgat gcggttgccg
     7381 tccccgagcc cgaacccgcg cctgtcgccg ttgtggagca ggctcctcaa tatgttgatg
     7441 aaaccatttc cctgtctgcc aaaaccctgt tcggtttcga taaggattca ttgcgcgccg
     7501 aagctcaaga caacctgaaa gtattggcgc aacgcctgag tcgaaccaat gtccaatctg
     7561 tccgcgtcga aggccatacc gactttatgg gttctgaaaa atacaatcag gctctgtccg
     7621 aacgccgcgc atacgtagtg gcaaacaacc tggtcagcaa cggcgtacct gcttctagaa
     7681 tttctgctgt cggcttgggc gaatctcaag cgcaaatgac tcaagtttgt caagccgaag
     7741 ttgccaaact gggtgcgaaa gcctctaaag ccaaaaaacg tgaggctctg attgcatgta
     7801 tcgaacctga ccgccgcgta gatgtgaaaa tccgcagcat cgtaacccgt caggttgtgc
     7861 cggcacgcaa tcatcaccaa cactaaggct aggtaatatc ttgccgatgc atgaggttag
     7921 cggattttgt accgggtact gttgcaatat tcgtgaaacg tcggccggta tcgatgatgt
     7981 gaaacaaacc ccgcttttgc ggggtttgtt tttttgggtg gttttctgaa acggctatcg
     8041 tcagaatcgg ggtgcaggtt cggattcgga ttcagattca tgtttgtgtc ccattgccgc
     8101 gctttatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacaatag
     8161 tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa tccactatat cggttgaaac
     8221 tctgatttta aggcggtagg atgtgggttt gcccatagca agggaatcct ttctgtatca
     8281 agccccgaaa gggataattc atacaaattc acgcctttcc ccctcattgg gaaatggatg
     8341 gaatcgtgcc cgatgtgtgc ggcactgtat gccggatatg gttttatcat catccctttt
     8401 cggttgaaac cccgccagtt gcagcgattg agcctaatcg gtggcggaag ttgccgcttt
     8461 gcattcgggg cggcgtgcag tgcggtgctt tgatatgccg tttgtgtgtt gaaacagggt
     8521 ggtcggtgca tacgggtacg gtatggctaa agctaaaagt gaaatacgct gaaacactga
     8581 atgagccgct ttattgtttg tacgaccttt gctgctttgc tatgatttaa attggattcg
     8641 cacgccggat attttgggat atgaaagaat tcgacttcat caaacggtat ttgcaaacag
     8701 gtacggataa ggatgtcgta ttgggcatag gcgacgatgc ggcgattgtc cgcccgcgcg
     8761 aaggcttcga tttgtgtttc agtgcggata tgcttttgaa ggacaggcat ttttttgcag
     8821 atgtcaaacc tgaaggcttg gcttggaagg ttttggccgt caatatttca gatatggcgg
     8881 cgatgggtgc gataccgcgt tgggtgctgc tgagcgcggc gttgcccgaa ttggatgaag
     8941 tatggctgga acggttttgc ggcagctttt tcggtttggc aaaaaagttt ggcgtaacgt
     9001 taatcggcgg cgatacgacc aagggcgata tggcgttcaa tgtaaccatt atcggcgaat
     9061 tgccgaaggg tagggcgttg cggcgtgatg cggcggttgc gggcgacgat atttgggtgt
     9121 cggggcgtgt cggtatggcg gcggcggctt tgaactgccg tctgaaacgg tgtgtgttgc
     9181 cggatgatgt gttcgccgaa tgcgaacaaa agctgctccg tcccgagcca agggttgggc
     9241 tggggcttgc gctgttgccg tttgcccggg cggcacagga tgtttcagac ggccttgcgc
     9301 aagatttggg gcatatcctg accgcttccg gcgtgggggc ggaaatttgg gccgattcgc
     9361 tgccatcttt atctgtattg aaagatattt tgccccgagc gcaatggctg tcttatactt
     9421 tggcgggcgg cgacgattac gagctggttt ttaccgctcc ggaaagttgc cgcagccgcg
     9481 tgcttgatgc ggcggaacgg tgcggcgtgc cggtaacgtg catcggcaaa atcaacggag
     9541 gatgccgtct gaaggtttta gatgccggcg gcagggaatt ggaactacat tctttaggat
     9601 tcgatcattt tggctgattt taaacctgac tttgcgtggc tgttgaaacg gccgttgtgt
     9661 tttttggctt tcggtttcgg cagcgggctg gttccgtttg cgccgggcac attcggcact
     9721 ttggcggcac tgcctttggc gtttgtgctg attttgctcg gcatagacgg gctgctgctg
     9781 gcttttgtgt gtatcgtgct gtttatgtgg ggcatacgta tttgtgcgtg tgcggaacgt
     9841 gaaacgggtg tcagcgacca cggtgggatt gtttgggacg agattgtcgc catgctgttt
     9901 gtgctggcgt ttgtgccgtt caggtggacg tggtggctgg cggcatttgt tctgttccgt
     9961 ctgtttgatg cgctcaaacc gccccccgtc ggttggtttg acaagaatct gcacggcggt
    10021 ttgggcatta tggcggacga tatggcggct gcggtgatga ccttgattgt cttgaggatt
    10081 gcaatgctgt tttaaacggg gctgccttgt aaaaatgccg tctgaaagcc tttcagacgg
    10141 cattgtttcg gaggttaacg cgttaccggt ttgtatttga tgcgtttcgg tttcgcgcct
    10201 tcttcgccga gtcggcgttt cttgtcggct tcgtattctt gatagttgcc gtcgaagaac
    10261 acccatttgg agtcgccttc acacgccaag atatgcgtgg ctatgcggtc gagaaaccag
    10321 cggtcgtgcg aaatcaccat cacgctgccg gcaaattcca acaatgcgtc ttccaacgcg
    10381 cgcagggttt ccacgtcgag atcgttggac ggttcgtcca gcagcaacac attgccgccg
    10441 cccaacaagg ttttcgccaa gtgcagacgg ccgcgttcgc cgccggaaag ctgccttgcg
    10501 attttgcttt ggtcgctgcc tttaaagttg aagcgtccca aatattggcg ggcggggatt
    10561 tcaaactgtc cgacctgcaa aatatcgcga ccttcggcaa tgttgtcgaa cacggttttg
    10621 tcgttttgca aaccttcgcg gctttggtca atcaagctca ttttcacggt ttgcccgatt
    10681 ttcacttcgc ccgaatcggg ctgctctttg cccgcaatca ttttgaacag cgtcgattta
    10741 cccgcgccgt tcgggccgat gatgccgaca atcgcgcccg ccggcacttt gaagctcaaa
    10801 ccgtcaatca gcactttatc gccgaacgat ttggaaacat tcacaaattc aatcacttcg
    10861 ttacccaaac gctcggcaac agggataaag atttcctgag tttcgttgcg tttttggtat
    10921 tcgtagttgc tcatttcttc aaaacgcgcc aaacgcgctt tgggcttggc ttggcggcct
    10981 ttggcatttt ggcgcaccca ttccaattcc tgcttcatcg ccttcacgcg cgcggcttcg
    11041 gatttcgcct cgttttccaa gcgtttttct ttctgctcca gccaagacga gtaattgcct
    11101 ttccacggaa tgccgtgtcc gcggtcgagt tccaaaatcc attcggcggc gttgtcgagg
    11161 aagtagcggt cgtgcgttac cgcgaccact gtgccgggga agcgcacgag gaattgctcc
    11221 agccattcca ccgattccgc atccaagtgg ttggtcggct cgtccaagag cagcatatcg
    11281 ggcttgctca acaaaagttt gcataaagcg acgcggcgtt tttcaccgcc cgaaagattg
    11341 ccgattttgg catcccaatc aggcaggcgc agcgcgtcgg cagcgatttc caattcgtgt
    11401 tccgcaccgc cgccagttga cgaacccgcc gcgataatcg cttccaagcg gccttgttct
    11461 tccgccagcg cgtcaaaatc cgcatcggga ttggcgtact cggcatacac ttcttccaaa
    11521 cgtttctgtg cggcagccac ttcgcccaaa ccgctttcca cttcctcgcg cacggttttt
    11581 tccggatcaa gctccggctc ttgcggcaga tagccgattt tgatgccgcc catcggcacg
    11641 gcttcgccct caaattcttt atccacgccc gccataatcc gcagcacggt ggacttgccc
    11701 gtgccgttca agcccaagag gccgattttc gcgccgggga agaaagaaag ggaaatatct
    11761 ttaatgatgg ttttctgcgg cggcacaacc ttgctcacgc gcagcataga atagacgtat
    11821 tgttgggaca tagttttctc gattcggtca aacaaatttc agacggccat tttaaccgat
    11881 aatttgattt aagccagttt atccgcgaac cggtattgcc aaaatcgggc aggattcata
    11941 aaatccgcct atccctttga aattatacag acaaaaaaat aataatgata ggggatcgcc
    12001 gcgccggcaa ccatttcgga ttttccaaag caaatacttt tcaaatcaaa aaaaaggatt
    12061 tactttatgt cggaatatac gcctcaaaca gcaaaacaag gtttgcccgc gctggcaaaa
    12121 agcacgattt ggatgttgag cttcggctat ctcggcgttc agacggcctt taccctgcaa
    12181 agctcgcaga tgagccgcat ttttcaaacg ctaggcgcag acccgcacaa tttgggctgg
    12241 tttttcatcc tgccgccgct ggcggggatg ctggttcagc cgatagtggc tactactcag
    12301 accgcacttg gaagccgcgc ttgggcggcc gccgcctgcc gtatctgctt tacggcacgc
    12361 tgattgcggt catcgtgatg attttgatgc cgaactcggg cagcttcggt ttcggctatg
    12421 cgtcgctggc ggccttgtcg ttcggcgcgc tgatgattgc gctgttggac gtgtcgtcga
    12481 atatggcgat gcagccgttt aagatgatgg tcggcgatat ggtcaacgag gagcagaaaa
    12541 gctacgccta cgggattcaa agtttcttag cgaatacgga cgcggttgtg gcagcgattc
    12601 tgccgtttgt gttcgcgtat atcggtttgg cgaacactgc cgagaaaggc gttgtgccac
    12661 aaaccgtggt cgtagcattc tatgtgggtg cggcgttact gattattacc agtgcgttca
    12721 caatctccaa agtcaaagaa tacgacccgg aaacctacgc ccgttaccac ggcatcgatg
    12781 tcgccgcgaa tcaggaaaaa gccaactggt tcgaactctt aaaaaccgcg cctaaagtgt
    12841 tttggacggt tactccggta cagtttttct gctggttcgc cttccggtat atgtggactt
    12901 actcggcagg cgcgattgca gaaaacgtct ggcacactac cgatgcgtct tccgtaggcc
    12961 atcaggaggc gggcaaccgg tacggcgttt tggcggcggt gtagtcggtt gcggcggtga
    13021 tttgttcgtt tattctggca aaagtaccga ataaatacca taaggcgggt tatttcggct
    13081 gtttggcttt gggcgcgctc ggtttcttct ctatcttctt catctacaat caatacgcac
    13141 tcatcctgtc ttatatctta atcggcatcg cttgggcggg cattatcact tatccgctga
    13201 cgattgtggc caacgctttg tcgggcaaac acatggatac ttatttgggc ctgtttaacg
    13261 gctctgtctg tatgccgcaa atcgtcgctt cgctgttgag tttcgtgctt ttcccgatgc
    13321 tgggcggcca tcaggcaacc atgttcttgg ttgcaggcgc agtcttgctg ctgggagcct
    13381 tctcagtctg tctgattaaa gagatccacg gcggggtttg agcgatgagc gatacccccg
    13441 ctacccgcga tttcggcctg atcgacgggc gggccgtaac cggctatgtg ctgtccaacc
    13501 ggcgtggtac gtgcgtcttc gtgctggact tgggcgggat tgtgcaggaa ttttccgttt
    13561 tggcagacgg cgtgcgcgaa aaccccgtgg tgtcgttcga cgatgcggct tcctatgcgg
    13621 acaatccgtt tcagattaac aagcagatag ggcgcgtggc cggacgcatc cgcggtgcgg
    13681 cgttcgacat caacggtagg acttaccgcg tggaggccaa cgaaggcagg aacgcgctgc
    13741 acggcggttc gcacgggctg gccgttaccc gtttcaacgc ggtggcggca gacggccgac
    13801 ggttatccca acgatttgga tatttcctac cgcttggacg aggacggccg gcttaccgtt
    13861 acctatcgcg ccaccgcgct cggcgacacg gtgttcgacc cgacgctgca catttactgg
    13921 cggctggacg cgggcctgca cgatgcggtt ctgcatattc cgcagggcgg acatattccg
    13981 gccgatgccg aaaaactgcc cgtcttaacg gtttcagacg gcctcgaagt atttgatttc
    14041 agccggccca agccgccgga tgccgccgtt gccgccctgc gccgcgaaac gggccggttt
    14101 tgacgacgct taccgcgtgc cgtccgatat aggccgtccc gccgcagtgt tgcaagccgg
    14161 acgccgccgt cgtatcagca tatacagcga ccgcaacggc ttggtcatct ttaccgccgc
    14221 cccgcaggat ttcgcgcggc acgatgcggg cgtttacgac gcgctggcga ccgaggcgca
    14281 gacgctgccc gacagcctgc attggcccga attcggcaat atccgtctga acaagggtga
    14341 tactagggag gcgacgattg cttacggcat cgaatccctt tcttaggagc ttcctaacac
    14401 cggtttcaga cgaccttttt atagtggatt aacaaaaacc agtacggcgt tgcctcgcct
    14461 tgccgtacta tctgtactgt ctgcggcttc gtcgccttgt cctgattttt gttaatccac
    14521 tataagattt caccattccc tcaaatcaat ccaaacagga gctttacgat gtacacaaga
    14581 attatggaaa tcagcccttg gacgctgcgt tcggcaaaac tggaaaaaga acacaaacgg
    14641 ctgcaagaga gcctgaccag cttgggcaac ggctatatgg gtatgcgcgg cagctttgag
    14701 gaaacctact ccgccgacag ccacttgggc acctacatcg ccggcgtgtg gtttcccgac
    14761 aaaacccgcg tcggctggtg gaaaaacggc tatcccaaat atttcggcaa agccatcaac
    14821 gcgctcaatt tcagcaaagt caaaatcttt gtcgacgggc aagaggtgga cttggcgaaa
    14881 aacgacgttg ccggcttctc cgtcgaactg gatatgcaac acggcgtgtt gcgccgctcg
    14941 ttcaccgtat tcggtgtgcg tttcgatgtg tgcaaattcc tgtcggtcgc gcaaaaagag
    15001 ctggctctca cccgctggga agccgtgtcc gttgacggca aaacccacca agtccgcatc
    15061 gattccatca tcgatgccga cgtgaaaaac gaagactcca actacgaaga aaaattctgg
    15121 caggtattgg acaaaggcgt ttcagacgac cgctcctaca ttgccgccca aaccgtcgcc
    15181 aaccctttcg gtgtggaaca atttatcgtc aacgccgggc aaaccttcgc cggcagcttc
    15241 aaagccttcg gcggcagcca aaccgattgg caggtctcta attcttttga agccgaagtc
    15301 ggcggcacgc ccgaaacctt tgaaaaacgc gtgattgtta ccaccagccg cgattatcag
    15361 ggcttggaag cagtgaaagc cgccggccgc gccttatctg aaaaaatcgc aggtgttgcg
    15421 tttgaaacct tgctggatgc gcacaaagca ggctggcagc atcgttggga aatcgccgac
    15481 gtggtcatcg aaggcagcga cgaagcacag cagggcatcc gcttcaacct gttccaactg
    15541 ttctccacct actacggcga agacgcgcgt ctgaacatcg gccccaaagg ctttaccggc
    15601 gaaaaatacg gcggcgcgac ctatcgggac accgaagcct acgccgtgcc gctctacctt
    15661 gcactggcgg aacccgaagt tacccgcaac ctgctgcaat accgccgcaa ccaaattgcc
    15721 gcaggtgcag cataacgcac gcgaacaggg cttggcgggc gcactctatc cgatggtaac
    15781 gtttacgggc atcgagtgcc acaacgaatg ggaaatcacc ttcgaggaaa tccaccgtaa
    15841 cggcgcgatt ccttacgcca tctacaacta caccaactac accggtgacg agtgctatct
    15901 tgccaaagaa ggcttggaag tcttggtcga agtgtcccgc ttccgggcgg accgcgtcca
    15961 cttctccaaa cgcaacggca aatacatgat tcaaggcgta accggtccga acgaatacga
    16021 aaacaacatc aacaacaact ggtaaaccaa caccctcgcc gcatgggtat tgggctacac
    16081 ccgcgaagcc ttggcgaaat acccgcgtcc gggttcgaac gtgagcgccg ccgagttgga
    16141 aaaatgggcg gacatcagcg cgaatatgta ccgtccgcat gacgaagaac tcggcgtatt
    16201 cgtgcagcac gacggcttcc ttgacaaaga catccgcccc gtatccgcgc tttcgcccga
    16261 cgatttgccg ctcaaccaga aatggtcgtg ggacaaaatc ctgcgttcgc ccttcatcaa
    16321 acaggcggac gtattgcaag gcatctactt cttcggcgac cgtttcgaca tggacgaaaa
    16381 acgccgcaac ttcgacttct acgaaccgat gaccgtgcat gaaagctcgt tgtctccatg
    16441 tatccactcc atcctcgctg ccgaactggg caaagaagaa aaagccgtgg aaatgtaccg
    16501 gcgcaccgcc cgcctggact tggacgacta caacaacgac accgaagacg gcctgcatat
    16561 tacttctatg accggctcgt ggctcgccat cgtccaaggt ttcgcccaaa tgaaaacttg
    16621 gggcggcaaa ctcagcttcg caccgttcct gccgagtgcg tggacaggct atgccttcca
    16681 catcaactac cgcggccgtc tgattaaagt cgccgtcggc aaaaaaacgt cgtcttcacc
    16741 ctgctcaaag gcgatccgct cgaattgcag gtgtacggca aagatatcac gctcaacggc
    16801 agccacaccg ttgcattgga aaaataagga gggcgcaaaa tgacttttac cgcagtgctc
    16861 ttcgatctcg acggcgtgat taccgatacc gccgaatacc actacctcgc atggaaaaag
    16921 cttgccgaag aattgggcat cggcatcgac cgcaagttta acgagcagct caaaggcgtg
    16981 tcgcgcgacg attcgctcaa acgcatcctc gcgcacggcg gcaaaaccgt cggcgaaacc
    17041 gagttcgccg aactgacctg ccgcaaaaac gacaactact tagagatgat tcaggcagtc
    17101 aaacccgaag acgtgtaccc cggcattttg ccgctgctgg aagcattgag ggcaaacggc
    17161 aaaaaaatcg ccctcgcgtc cgccagtaaa aacggcccgt tcttgctcga acgcatgggg
    17221 ctgacccact tcttcgacac cgtcgccgac cctgccgccg tcgcgcattc caaaccctcc
    17281 cccgacatct tccttgccgc cgccgagggc gtgggtgcgg acatacgccg ctgccggcgt
    17341 cgccgccatc aaagcctctg gcgctttgcc catcggcgtg ggcaaaaccg aagacttggg
    17401 cagcgacatc gcgctggtgt ccgacaccgc cgagctgacc tacgcctact tgcaaaatgt
    17461 gtgggaacag tcgggcagat aaaattctaa ggaagtaaaa aggccgtctg aacagtgttt
    17521 cagacggcct ttctgctttt agaacagaat gataacccga gacctttgca aaaatccc
//
LOCUS       DAXGCP010000041        17548 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.041, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000041 DAXGCP010000000
VERSION     DAXGCP010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17548
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.041"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(354..1196)
                     /locus_tag="ACFJCW_001195"
     CDS             complement(354..1196)
                     /locus_tag="ACFJCW_001195"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HFC4151342.1"
                     /translation="MLICNPYEVVIHGTTSSGKIFRPGDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPANERVLLAQAIEEKHAAEKTQEQTASGASYVLREIGADDTATAFAALSVLRSAL
                     TDIGRFTEQINKTQRPQGYRLLGIFEECKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKISAETGVTKIHLNVHVNHDRTDAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            1431..2351
                     /gene="pyrB"
                     /locus_tag="ACFJCW_001196"
     CDS             1431..2351
                     /gene="pyrB"
                     /locus_tag="ACFJCW_001196"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HFC4151343.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     VQRHPKDGAARVAAEFSCVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELEEADCRYRALGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLARAKPNLRVLHPLPRTDEIHPDVD
                     AAPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            2361..2819
                     /gene="pyrI"
                     /locus_tag="ACFJCW_001197"
     CDS             2361..2819
                     /gene="pyrI"
                     /locus_tag="ACFJCW_001197"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HFC4151344.1"
                     /translation="MEAQKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLTLPDEI
                     AEVFRCPNPNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYNRDSVAEA"
     gene            2881..3547
                     /locus_tag="ACFJCW_001198"
                     /pseudo
     CDS             2881..3547
                     /locus_tag="ACFJCW_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3952..5175)
                     /locus_tag="ACFJCW_001199"
     CDS             complement(3952..5175)
                     /locus_tag="ACFJCW_001199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC4151345.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPDAPQRYTVKQGDTLW
                     GISGKYLYSPWQWCRLWGANRDQIHNPDLIYPGQVLVLRYVGGEPRLDLEQTDGIPVV
                     KISPDKEVSGYGIPAIDVNFYRVFMQHPQIVSRKETAAAPRLLSGPEGRLLYTKGARV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAEE
                     RLKDNEYYTRTHPLITPVRTRSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMVPHEP
                     SRPVQAKIVSVFEGVGVGGQFKTITIDKGGDDGLDKGAVLSLYKRKKTMQVNLSNNLT
                     EEPKSRDTVELISTPAEEVGLAMVYHTAPKLAYAIILENISDISEGDTAANPGRDLDN
                     MPDQGRARVDSDPFQ"
     gene            5359..5514
                     /locus_tag="ACFJCW_001200"
     CDS             5359..5514
                     /locus_tag="ACFJCW_001200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151346.1"
                     /translation="MALLNIEQGYNTTLHNRSPYLINFGLSCLIGLEKAAAAPRDVPR
                     DNKCSAF"
     gene            5587..6090
                     /gene="def"
                     /locus_tag="ACFJCW_001201"
     CDS             5587..6090
                     /gene="def"
                     /locus_tag="ACFJCW_001201"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HFC4151347.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            6178..7104
                     /gene="fmt"
                     /locus_tag="ACFJCW_001202"
     CDS             6178..7104
                     /gene="fmt"
                     /locus_tag="ACFJCW_001202"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HFC4151348.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     ADIIERKIRAFNPVPAAWVEYQGKPMKIRRAEVVAQQGTAGEVLSCSADGLVVACGES
                     ALKITELQPAGGRRMNIAAFAAGRSIEAGTKL"
     gene            7183..8442
                     /gene="rsmB"
                     /locus_tag="ACFJCW_001203"
     CDS             7183..8442
                     /gene="rsmB"
                     /locus_tag="ACFJCW_001203"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HFC4151349.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAHIRAAHPQLTAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIDNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLREREKLAASCKKDDVAKYNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLAVEGIAAKALDEYAVTLEEAVPVNRL
                     PGFAEGLVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASAACADARDLAAWYDGKPFDAILADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQALKQGGRMLLATCSVFVEENDGQLQKFLNRHA
                     DAEPIESRVLLPNKHQDGFYYALIQKH"
     gene            8408..9007
                     /locus_tag="ACFJCW_001204"
     CDS             8408..9007
                     /locus_tag="ACFJCW_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HFC4151350.1"
                     /translation="MAFITRLFKSIKQWLVLLPILSVLPDAAAEGIAATRAEARITDG
                     GRLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPTIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            9007..11127
                     /locus_tag="ACFJCW_001205"
     CDS             9007..11127
                     /locus_tag="ACFJCW_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC4151351.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVSFSAMLL
                     LVLSAVLARYVILLLKDRRNGVFGSQIAKRLSGMFTLVAVLPGLFLFGISAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALDLAADNAVSNAVPVQIDLIGTASLSGNMGSVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHQFDQPLPDKEHWEQIQQTGSVRSLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPIPENVAQDAVLIEKARAKYAELSYSKKGLQTFFLVTL
                     LIASLLSIFLALVMALYFARRFVEPILSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLDGLTTGVVVFDEKGRLKTFNKAVE
                     QILGMPLAPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVQVEYAAPDDAKIL
                     LGKATVLPEDNGNGVVMVIDDITVLIRAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDDQDAQILTRSTDTIIKQVAALKEMVEAFRNYARAPSLKLENQDLNALI
                     GDVLALYEAGPCRFEAELAGEPLMMAADTTAMRQVLHNIFKNAAEAAEEADMPEVRVK
                     SETGQDGRIVLTVCDNGKGFGKEMLHNAFEPYVTDKPAGTGLGLPVVKKIIGEHGGRI
                     SLSNQDAGGACVRIILPKTVETYA"
     gene            11120..12397
                     /locus_tag="ACFJCW_001206"
     CDS             11120..12397
                     /locus_tag="ACFJCW_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HFC4151352.1"
                     /translation="MRSSDILIVDDEVGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVVMSGHASIDTAVEATKIGAIDF
                     LEKPISLQKLLSAVENALKHGAAQIETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEAGSPFETVARYFHKNGTPWVSPARVEYLIDMPMELLQKAEGGVLYVGDIAQYSR
                     NIQTGITFIIGKAERCRVRVIASCSYAAGSDGISCEEKLAGLFSESVVRIPPLSMQHE
                     DIPFLIQGIACNVAESQKITPTAFSDDALAVLSRYDWPGNFEQLQNVVTTLLLEADGQ
                     EIGIGAASSALGRGVPADGTGHMACGFDFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            12488..13675
                     /gene="dprA"
                     /locus_tag="ACFJCW_001207"
     CDS             12488..13675
                     /gene="dprA"
                     /locus_tag="ACFJCW_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HFC4151353.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLMRSFGSAQNALSAPAEQV
                     APAVRHKHALEAWHNAEKRALARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGRALGGKGIPTVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPANKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLTECLDDILNECPGLLQNTGASSYSINKDTPDTGRRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            13701..14162
                     /locus_tag="ACFJCW_001208"
     CDS             13701..14162
                     /locus_tag="ACFJCW_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HFC4151354.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPAGSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            14234..16540
                     /gene="topA"
                     /locus_tag="ACFJCW_001209"
     CDS             14234..16540
                     /gene="topA"
                     /locus_tag="ACFJCW_001209"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HFC4151355.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAAAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVANPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPDEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEESEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRRWIPVMDKFWKPFIKQVE
                     EKEGIERAKFTTQELNETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLAYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAEECPNCHWPVLTIKT
                     TKRRGVEKVCPQKECGWKEQIEPPAPQE"
     gene            16761..16889
                     /locus_tag="ACFJCW_001210"
                     /pseudo
     CDS             16761..16889
                     /locus_tag="ACFJCW_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
     gene            16879..17423
                     /locus_tag="ACFJCW_001211"
                     /pseudo
     CDS             16879..17423
                     /locus_tag="ACFJCW_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
BASE COUNT         4189 a         4716 c         5044 g         3599 t
ORIGIN      
        1 agggaatcgt tctctttgag ctaaggcggg gcaacgccgt actggttttt gttaatccac
       61 tataaatagc gagcatcgat tcacggtgcg ctttagtgca aagcgtacaa cgcgagcctg
      121 aaccaccagc cgcaatagga aaagaaagcc gatagagtgc aatgcttgcc aacgcgcaag
      181 cgagcttgca agaacgcttg gctcaacgag agcaggcaag acagaaagca ggataggaga
      241 ggcaacgcaa aggtctcggg ctttgatttc gccgtaaacc tgagtgccgc cttgtccgga
      301 cggggtggtt caggcggcgg gtgccgacag ggtgcagatg aggaggagta ttttcatttg
      361 gggtcgcaac ggaagtggta ggcgcagatt tcaaaaccgt ttttgaaata caggcggtgc
      421 gcgtcggtac ggtcgtggtt gacgtggacg ttaaggtgga ttttggtaac ccctgtttcc
      481 gcgctgattt tgcggacttc ttccaaaagg cgcgaggcgt agcctttgcg gcggctttgc
      541 ggcagggtaa cgatgtcgtc gatgtggatg tggcggccgc cggctagggt gcaggcttcg
      601 cggaagccgc agacggcgac ggcattgtgt ttgcattctt caaaaatacc cagcaggcgg
      661 tagccttggg ggcgttgggt tttgttgatc tgttcggtaa agcggccgat gtcggtcagg
      721 gcggaacgca aaacgctcaa ggctgcaaag gcggtggcgg tgtcgtccgc gccgatttcg
      781 cgcaaaacgt aggatgcgcc cgaggcggtc tgttcctgtg ttttctcggc ggcgtgtttt
      841 tcttcgattg cctgtgccag caggacgcgt tcgttggcag ggtcgttttg tccgccctgt
      901 tcgcgttctt cgagcagggc tttgcagtcg atgacgcgca ggtcgttgtc ggcggcaaag
      961 tccatcagga agcggaacat ctgcggattg tcggtttcca gttttttatc gacggcgacg
     1021 cagcggatgt tgtccaccag catggggcgc acccatttcg aataggagag gcggttgtct
     1081 ttggtgaacg aggacaggat gccgcacagg cgttccgccc agtcgccggg gcggaaaatc
     1141 ttgccggaac tcgttgtgcc gtggatgacg acttcgtagg ggttgcagat taacatggcg
     1201 gcttcctgaa aagaaatgtc tggcgcgatt ataccttatg cttatgcggg cgtgtttgga
     1261 tatgccgtct gaaaaataca ggattcgtgc ggtaaaactt tgtggaggca aatgtgcgat
     1321 aatacgcgcc gtgtcgccgc ttttgcgaag ctgttccgca aacatacggg cggcgtggac
     1381 gtataaccgg atgcccgcct gacgcgggtt ttttacggaa ggggggcaaa atgcctaatc
     1441 cgctttacag acagcacatc atctccattt cggatttgtc gcgcgaacag ttggaatgcc
     1501 tgcttcagac ggcattgaag ctgaaggcgc atccgcgcgg cgatttgttg gaaggcaaac
     1561 tcatcggttc gtgctttttc gagccgtcca cgcgcacgag gctgtcgttt gaaacggcgg
     1621 tgcagcgttt gggcggtaag gtcatcggct tttcggacgg cgcgaatacc agtgccaaaa
     1681 aaggcgaaac gcttgccgat accgcccgta tcatttccgg ctacaccgac gcgattgtcc
     1741 aacgccatcc caaagacggc gcggcgcgcg tggcggcgga gttttcgtgc gtccccgtca
     1801 tcaacgccgg cgacggcacg aaccagcacc ctagccaaac cttgttggac ctggtaacga
     1861 tttatgaaac gcaggggcgt ttggacaagc ttaaaatcgc catggcgggc gacttgaaat
     1921 acgggcgcac cgtgcattcg ctgtgtcagg cgttgaaacg ctggggctgc gaatttgcct
     1981 tcgtctcgcc gcccagcctc gcgatgcccg actacattac cgaagagttg gaagaagccg
     2041 actgccgata ccgcgccctc ggcagtttgg aagaggcggc ggaatgggcg gacatcttgt
     2101 atatgacccg cgtccagcgc gaacgtttcg acgaacagga atttgccaaa atccaaggca
     2161 aattcaacct cgaagcgtct atgctcgccc gcgccaaacc gaacctgcgc gtgctgcacc
     2221 ccctgccgcg cacggacgaa atccaccccg atgtcgatgc cgcgccgcac gcctattatt
     2281 tcgagcaggc gaccaacggc gtttatgcgc gtatggcgat attgtcgctg gtgttgaacg
     2341 aagaagtgtg aggaaccgat atggaagcgc aaaaactcag tgtcgaagcc atcgaaaaag
     2401 gcacggttat cgaccatatt cccgccggca gggggctgac catcctgcgc cagttcaaac
     2461 ttttgcacta cggcaacgcg gtaaccgtgg gcttcaacct gcccagcaaa acccagggca
     2521 gcaaagacat catcaaaatc aaaggcgtgt gcttggacga taaagccgcc gaccgcctcg
     2581 ccctgttcgc ccccgaagcg gtggtcaaca ccatcgacaa tttcaaggtc gtacagaagc
     2641 ggcatttgac cctgcccgac gaaatcgccg aagtgttccg ctgcccgaat cccaattgcg
     2701 ccggccacgg cgagccggtc aaaagccggt tttatgttaa gaaacacaac gggcagacgc
     2761 ggctgaaatg ccactactgc gaaaaaacct acaaccggga ttcggtggcg gaagcctgac
     2821 ggattcccga gcccggcggc ggaattttgc ctgccgcctg ttttgccaat ctgaaatgga
     2881 atgatgatgc acgcttctgt ccaaagtcgt ttcgcaccga tactttatgt tttgattttc
     2941 tttgccggtt ttttgaccgc gcaaatctgg ttcaatcaga aagcctatac tgaagagctg
     3001 cctccgcttc tgtccgcatt gtccgccgtc gcgctggtgt ggctggcgtg ggcgttcgtg
     3061 tcggtgcgtt caaaggctaa ggcagaaaag ttctaccgcg aaaaaatgat acagaacgaa
     3121 agcatacacc ccgtcctgca cgcttctttg caacacttgg aacacaagcc gcaaatgctc
     3181 gccctgctgg tcaaaaacca cggcaaaggc atggcggaac aggtcaggtt caaggcggaa
     3241 gtgctgcccg acgacgaaga cgcgcgcacg attgccgccg agttggcaaa aatggatatg
     3301 ttcgcattgg ggacggacgc ggtcgcctcg ggcgaaacct atgggcgcgt gttcgccgat
     3361 attttcgagt tgtcggcggc tttggaaggg cgcgcgttca aagggatact gaaactgacg
     3421 gcggaatata aaaaacatct tcggcgatgc ctgccgttcg gaaacggcgt tggatttggg
     3481 cgcgctcaat caggcgttga gggaaatctc gaaaacgccg gaaaagccta agcagatatt
     3541 ttattgaagg tgtcccgatg tatggggagc gcacgggtgg cgcggcggca aagcggcaag
     3601 attgggtttg gatacccggt tggttttata gtagattaac aaaaatcagg acaaggcggc
     3661 gggccgcaga cagtacaaat agtacggaat cggttcgccc ggtgcttggg caccttaggg
     3721 aatcgttccc tttgagccgg ggcggggcaa cgccgtaccg gtttttgtta attcgctata
     3781 tctgtctgca agggagacag ccgctgtgat ttccgttcgg gcggaaaccg attccatcgg
     3841 ataaaaggca ttttgtccga ctaaatcagg gttttgcatc aacgggatat gaaaacacag
     3901 cctaaataaa aatgccgtct gaatgcttca gacggcattg ttgccgaggg gttattggaa
     3961 agggtcggaa tcgacgcggg cgcggccctg atccggcata ttgtccaaat cccgtcccgg
     4021 attggcggcg gtgtcgcctt cggaaatatc ggagatgttt tccaaaataa tggcgtaagc
     4081 cagtttcggc gcagtgtggt aaaccattgc caagcccact tcttcggcag gtgtcgaaat
     4141 cagctcgacg gtatccctgc ttttaggttc ttcggtcaaa ttgttggaga ggttgacctg
     4201 catcgttttc ttgcgtttgt aaaggcttaa aactgcgcct ttgtccaaac cgtcgtcccc
     4261 gcctttgtct atcgtaatgg ttttgaactg tccgccgacc cccacgcctt caaacacgga
     4321 aacgattttt gcctgaaccg ggcgggacgg ttcgtgcggc accatattga agcggtcggt
     4381 gtcttccggc attttcatca ggtagtcgcc ctgctgtatt tcggaaatgg cggtttcgac
     4441 caccagcggc tgtatcgaac gggtgcgcac cggggtaatc aaaggatggg tgcgggtgta
     4501 gtattcgttg tctttcagcc gttcttcagc ctgtttcgag cgttgttcga gggcggagtc
     4561 ggtatagtcg agggagcgca cgatgccgct gaatgcgact tcttgtccga ggaatttacc
     4621 cgtatccgga tcggtgatgt ttttattgat tcggtaggtc agataacggc ccggctcttt
     4681 caggcctttg gtgtaaaccc tggcgccttt ggtgtacagc agcctgcctt ccgggcccga
     4741 gagcaggcgc ggcgcggcag cggtttcttt gcgggaaacg atttgcgggt gctgcataaa
     4801 gacgcggtag aagttgacat cgatggcggg aataccgtat ccggacactt ccttatccgg
     4861 actgattttg acgacgggga tgccgtctgt ctgttccaaa tcaaggcgcg gttcgccgcc
     4921 aacgtagcgc aacaccaata cctggcccgg ataaatcagg tcgggattgt ggatttgatc
     4981 ccggttcgcg ccccacaggc ggcaccattg ccacgggctg tacaggtatt tgcccgaaat
     5041 accccacagg gtgtcgccct gtttgaccgt gtagcgttgc ggcgcatccg ggcgcacctc
     5101 cagatttgcc gccaaagttt gtgttgagaa tgccatacct gccgcgcaga gcagggttat
     5161 aatacgacgt tgcataaccg ttccccttat ctgataaatt tcggtttgtc ttgcttgatt
     5221 gggttggaaa aagcggcggc agcccctcgg gatgtgccgc gtgataacaa atgttccgca
     5281 ttttaacatc gaattatccg taccatcacg gtaattatga aaaacaggcg gcgtatccgc
     5341 cgaaggaaag agaaaattat ggctttactg aatatagagc agggttataa tacgacgttg
     5401 cataaccgtt ccccttatct gataaatttc ggtttgtctt gcttgattgg gttggaaaaa
     5461 gcggcggcag cccctcggga tgtgccgcgt gataacaaat gttccgcatt ttaacatcga
     5521 attatccgta ccatcacggt aattatgaaa aacaggcggc gtatccgccg aaggaaagag
     5581 aaaattatgg ctttactgaa tatcttgcaa tatcccgacg agcgtctgca cacggtggca
     5641 aagcctgtcg aacaagttga cgagcgcatc cggaagctgg ttgccgatat gtttgaaacg
     5701 atgtacgaat cgcgcggcat cgggctggcg gcgacgcagg tcgatgtgca cgaacgcgtg
     5761 gtcgtgatgg atttgaccga agaccgcagc gaaccgcgcg tgttcatcaa ccccgtcatc
     5821 gttgaaaaag acggcgaaac cacttacgaa gagggctgcc tgtccgtacc gggcatttac
     5881 gacgccgtta cccgcgccga acgcgtcaag gtcgaggctt tgaacgaaaa aggcgaaaaa
     5941 ttcacgctgg aggcggacgg gctgctggcg atttgcgtgc agcacgagtt agatcacctg
     6001 atgggcatcg tgtttgtcga acgcctttcc caactcaagc aggggcggat taagaccaaa
     6061 ctgaaaaaac gtcagaaaca tacgatttga ttcgcttcgt catgccgtct gaacgctgca
     6121 aggctttcag acggcacagc cttgtccgac aactttacgc acacgcagga acacgctatg
     6181 aaagtcatct ttgccggcac gcccgatttt gccgccgccg ccttaaaagc cgttgccgcc
     6241 gccggttttg aaatcccgct ggtgctgacc cagcccgacc gtccgaaagg gcgcggtatg
     6301 caactgaccg ccccgcctgt caaacaagcc gcgctggaac tcggtttgcg cgtggcacag
     6361 cccgaaaaac tgcgcaacaa cgccgaagcc ctgcaaatgc tcaaagaggt cgaggcggac
     6421 gtaatggtgg ttgccgcgta cggcttgatt ctgccgcagg aagtgttgga tacaccgaaa
     6481 cacggctgcc tcaatatcca cgcttcgctg ctgccccgtt ggcgcggcgc ggcgccgatt
     6541 cagcgcgcga ttgaggccgg cgatgccgaa accggcgtgt gcattatgca gatggacatc
     6601 ggtttggaca ccggcgatgt ggtcagcgaa caccgctacg ccatccaacc taccgatacc
     6661 gccaacgaag tccacgacgc gctgatggaa atcggtgcgg cggcggttgt tgccgatttg
     6721 caacagcttc aaagcaaagg ccgtctgaac gcggtcaaac agcccgaaga aggcgtaact
     6781 tacgcccaaa aactaagcaa agaagaagcg cgtatcgatt ggagcgaaag cgcggacatt
     6841 atcgaacgca aaatccgcgc cttcaacccc gtgcctgccg cgtgggtcga atatcagggc
     6901 aagccgatga aaatccggcg tgccgaagtg gtggcgcaac aaggtacggc aggcgaagtg
     6961 ttgtcctgtt cggcggacgg tttggtcgtt gcctgcggcg aaagcgcgct gaagattacc
     7021 gaattgcagc ctgccggcgg caggcgtatg aatattgcgg cgtttgcggc gggacggtct
     7081 attgaagcag ggacgaagct gtaaatccct tcagacggca ttccgatccg caaacgggaa
     7141 tgccgtctga aaccatcagt tgaagaaagc gaatcacata atatgagtat ggcacttgcc
     7201 caaaaacttg ccgccgacag cattgcggcg gttgccgaag ggcgcaacct tcaggacgtg
     7261 ttggcgcaca tccgcgcggc gcatccgcag ctgacggcgc aggaaaacgg cgcgttgcag
     7321 gatatcgcct acggctgcca gcgttatttg ggcagtttga aacatatgct cgcgcagatg
     7381 ctgaaaaagc ccatcgacaa tccgcagctc gaaagcctgc ttttggcggc gttgtaccaa
     7441 ctgcattaca cgcgcaacgc gccccacgcc gtggtcaacg aagctgttga aagcatagcc
     7501 aaaatcgggc gcgggcagta ccgttcgttt gccaacgcgg ttttgcgccg ctttttgcgc
     7561 gaacgtgaaa aattggcggc ttcctgcaaa aaagacgatg tggcgaaata caacctgccg
     7621 ctgtggtggg ttgcctacct gaaaaaccat tatccgaaac actggcacaa catcgccgcc
     7681 gcgctgcaat cccatccgcc gatgacgttg cgcgtcaacc gccggcacgg caacgccgaa
     7741 agctatttgg aaaaactggc tgtggaaggt atcgcggcta aggcgttgga cgaatatgcg
     7801 gttacgttgg aagaagccgt gccggtaaac cgtctgcccg gttttgccga aggactggtg
     7861 tcggtacagg acttcggcgc gcagcaggcg gcgtatctcc ttaacccgaa agacggcgaa
     7921 cggattttgg acgcgtgcgc cgcgccgggc ggcaagacgg ggcatatttt ggaactggcg
     7981 gactgccgcg ttaccgcctt ggacatcgat gcaggccgtc tgaagcgtgt ggaggacaat
     8041 atcgcccgtt tgggctttca gacggcatcg gcggcgtgtg ccgatgcgcg ggatttggcg
     8101 gcgtggtatg atggaaagcc tttcgacgca atccttgccg acgtgccgtg caccgcttcc
     8161 ggcgtggcgc ggcgcaatcc cgacgtgaaa tggctgcgcc gaccgaccga cgcgctcaaa
     8221 accgcccgcc agcaggaagc cctgctggac gcactttggc aggcgttgaa acagggcggc
     8281 agaatgctgc ttgccacctg ttccgtgttc gtcgaagaaa acgacgggca actgcaaaaa
     8341 ttcctcaacc gccatgccga tgccgaaccg atcgaatcgc gggtgctttt accgaacaaa
     8401 caccaagatg gcttttatta cgcgcttatt caaaagcatt aaacaatggc ttgtgctgtt
     8461 gccgatactc tccgttttgc cggacgcggc ggcggagggc attgccgcga cccgcgccga
     8521 agcgaggata accgacggcg ggcggctttc catcagcagc cgcttccaaa ccgagctgcc
     8581 cgaccagctc caacaggcgt tgcgccgggg cgtaccgctc aactttacct taagctggca
     8641 gctttccgcc ccgacaatcg cttcttatcg gtttaaattg gggcaactga ttggcgatga
     8701 cgacaatatt gactacaaac taagtttcca tccgctgacc aaccgctacc gcgttaccgt
     8761 cggcgcattt tccaccgatt acgacacttt ggatgcggca ttgcgcgcga ccggcgcggt
     8821 tgccaactgg aaagtcctga acaaaggcgc gttgtccggt gcggaagcag gggaaaccaa
     8881 ggcggaaatc cgcctgacgc tgtccacttc aaaactgccc aagcctttcc aaatcaacgc
     8941 attgacttct caaaactggc atttggattc gggttggaaa cctctaaaca tcatcgggaa
     9001 caaataatgc gccgcttcct accgatcgca gccatatgcg ccgtcgtcct gctgtacgga
     9061 ttgacggcgg cgaccggcag caccagttcg ctggcggatt atttctggtg gatagtctcg
     9121 ttcagcgcaa tgctgctgct ggtgttgtcc gccgttttgg cacgttatgt catattgctg
     9181 ttgaaagaca ggcgcaacgg cgtgttcggt tcgcagattg ccaaacgcct ttccgggatg
     9241 ttcacgctgg tcgccgtact gcccggcttg ttcctgttcg gcatttccgc gcagtttatc
     9301 aacggcacga ttaattcgtg gttcggcaac gacacccacg aagccctcga acgcagcctt
     9361 aatttgagca agtccgcact ggatttggcg gcagacaatg ccgtcagcaa cgccgttccc
     9421 gtacagatag acctcatcgg caccgcctcc ctgtcgggca atatgggcag tgtgctggaa
     9481 cactacgccg gcagcggttt tgcccagctt gccctgtaca atgccgcaag cgggaaaatc
     9541 gaaaaaagca tcaatccgca ccaattcgac cagccgcttc ccgacaaaga acattgggaa
     9601 cagattcagc agaccggttc ggttcggagt ttggaaagca taggcggcgt attgtacgcg
     9661 cagggatggt tgtcggcagg tacgcacaac gggcgcgatt acgcgctgtt cttccgccag
     9721 ccgattcccg aaaatgtggc acaggatgcc gttctgattg aaaaggcgcg ggcgaaatat
     9781 gccgaattga gttacagcaa aaaaggtttg cagacctttt ttctggtaac cctgctgatt
     9841 gcctcgctgc tgtcgatttt tcttgcgctg gtaatggcac tgtattttgc ccgccgtttc
     9901 gtcgaaccca ttctgtcgct tgccgagggc gcaaaggcgg tggcgcaggg tgatttcagc
     9961 cagacgcgcc ccgtattgcg caacgacgag ttcggacgtt tgaccaagct gttcaaccat
    10021 atgaccgagc agctttccat cgccaaagaa gcagacgaac gcaaccgccg gcgcgaggaa
    10081 gccgcccgcc actacctcga gtgcgtgttg gatgggttga ctaccggtgt ggtggtgttt
    10141 gacgaaaaag gccgtctgaa aaccttcaac aaggcggtgg aacagatttt ggggatgccg
    10201 ctcgcccccc tgtggggcag cagccggcat ggttggcacg gcgtttcggc gcagcagtcc
    10261 ctgcttgccg aagtgtttgc cgccatcggt gcggcggcag gtacggacaa accggtccag
    10321 gtggaatatg ccgcgccgga cgatgccaaa atcctgctgg gcaaggcgac ggtattgccc
    10381 gaagacaacg gcaacggcgt ggtgatggtg attgacgaca tcaccgtgct gatacgcgcg
    10441 caaaaagaag ccgcgtgggg tgaagtggcg aagcggctgg cacacgaaat ccgcaatccg
    10501 ctcacgccca tccagctttc cgccgaacgg ctggcgtgga aattgggcgg gaagctggac
    10561 gatcaggacg cgcaaatcct gacgcgttcg accgacacca tcatcaaaca ggtggcggcg
    10621 ttaaaagaaa tggtcgaggc attccgcaat tacgcgcgcg ccccttcgct caaactggaa
    10681 aatcaggatt tgaacgcctt aatcggcgat gttttggccc tgtacgaagc cggcccgtgc
    10741 cggtttgagg cggaacttgc cggcgaaccg ctgatgatgg cggcggatac gaccgccatg
    10801 cggcaggtgc tgcacaatat tttcaaaaat gccgccgaag cggcggaaga agccgatatg
    10861 cccgaagtca gggtaaaatc ggaaacgggg caggacggac ggattgtcct gacggtttgc
    10921 gacaacggca agggattcgg caaggaaatg ctgcacaatg ctttcgagcc gtatgtcacg
    10981 gataagccgg cgggaacggg actgggtctg cctgtagtga aaaaaatcat tggagaacac
    11041 ggcggccgca tcagcctgag caatcaggat gcgggtgggg cgtgtgtcag aatcatcttg
    11101 ccaaaaacgg tagaaactta tgcgtagcag cgatatttta attgtagacg acgaagtcgg
    11161 catccgcgac ctgctgtcgg aaatcctgca ggacgaaggc tattcggtcg cgttggcgga
    11221 aaatgccgaa gaggcgcgca agctgcgcca tcaggcgcgc ccggcaatgg tgctgctgga
    11281 tatttggatg cccgattgcg acggtatcac ccttttgaag gagtgggcga aaaacgggca
    11341 gctcaatatg ccggtggtgg tgatgagcgg gcatgccagc atcgataccg ccgtagaagc
    11401 gaccaaaatc ggcgcgatcg attttttgga aaaaccgatt tccctgcaaa agctgctgtc
    11461 tgcggtcgaa aacgcgttga aacacggtgc ggcgcaaatc gaaacgggac cggtgttcga
    11521 caaactgggc aacagtgccg cgattcaaga gatgaaccgc gaagtcgaag cggcggcaaa
    11581 gcgcacgtcc cctgtatttt tgacgggcga ggcgggttcg ccgtttgaaa ccgtggcgcg
    11641 ctatttccat aaaaacggta cgccgtgggt cagtccggca agggtcgaat atctgatcga
    11701 tatgccgatg gaactgttgc agaaggcgga gggcggcgtt ttgtatgtcg gcgacatcgc
    11761 ccaatacagc cgcaatatcc aaaccggcat tacctttatc atcggcaagg cagaacgctg
    11821 ccgtgtcagg gtgattgctt cgtgcagcta cgcggcaggt tcagacggca tttcatgtga
    11881 agaaaaattg gccgggcttt tttcggaatc ggtcgtccgt attccgcccc tgagtatgca
    11941 gcatgaagac attcccttcc tgatacaggg gattgcctgc aatgtggcgg aaagccaaaa
    12001 aatcacgcct accgcattca gtgacgatgc gcttgccgta ttgtcccgtt acgactggcc
    12061 ggggaatttc gagcagttgc aaaacgtcgt gacaacgctg ctgctggagg cggacgggca
    12121 ggaaatcggt atcggcgcgg cttcttcggc actggggcgc ggcgtgcctg ccgacggaac
    12181 ggggcatatg gcgtgcgggt tcgactttaa cctgccgctg cgcgaattaa gggaggaggt
    12241 ggagcggcgt tatttcgagt accacatcgc ccaagaaggt cagaatatga gcaaagtggc
    12301 gcagaaggtc ggtttggaac gcacgcacct ttaccgcaaa ctcaaacagc tcggcatcgg
    12361 cgtttcgcgc cgggcggggg aaaaaaccga agaataggcc cggacggccg gtttcccggc
    12421 tgcgggcttt tgttttcaga cggcatttgg agaaaatgcc gtctgaaatc gtaaggggat
    12481 ggattttatg acagaggacg aacgtttcgc gtggctgcaa ttggcgttta cgccctatat
    12541 cggcgcggaa agtttcctgc tgctgatgcg cagtttcggc agcgcgcaaa atgccttgtc
    12601 cgcaccggcg gaacaggttg ccccggcggt gcggcataag cacgcgcttg aggcttggca
    12661 caatgcagaa aaacgcgctt tggcgcggca ggcggcagaa gcggcgttgg aatgggaaat
    12721 gcgggacgga tgccgcctga tgctgcttca ggatgaagat ttccccgaaa tgctgacgca
    12781 ggggctgacc gcgccgccgg ttttgttttt gcgcggcaac gtgcggctgc tgcacaagcc
    12841 ttccgccgcc atcgtcggca gccgccatgc cacgccgcag gcgatgcgga ttgccaaaga
    12901 tttcggcagg gcgttgggtg ggaaaggcat tcctaccgtg tcgggtatgg cttcgggcat
    12961 cgacaccgcc gcccatcagg gcgcactgga ggcagaaggc ggcaccatcg ccgtgtgggg
    13021 gacgggcata gaccgcattt atccgccggc caacaaaaac cttgcttatg aaatcgccga
    13081 aaaagggctg attgtcagcg agttccccat cggcacgcgg ccgtatgccg gcaactttcc
    13141 gcgccgcaac cgcctgattg ccgcgctgtc gcaggttacg ctggtggtcg aggccgcctt
    13201 ggaatccggt tcgctgatta ccgccggcct ggcggcagaa atggggcgcg aagtcatggc
    13261 ggtgcccggt tcgatagaca acccccacag caaaggctgc cacaaactga ttaaagacgg
    13321 agcgaaactg acggaatgtt tggacgacat cctgaacgaa tgcccggggc tattgcaaaa
    13381 tacgggtgct tcgtcatatt ctataaataa ggatacgccc gacacgggcc gccgcgccgt
    13441 tcagacggca tacgccccgc cgcctgccgc aaaaatgccg tctgaagggg cggcaggcgg
    13501 cacagccgtc ggcggcatac tggataaaat gggtttcgac cccatccatc ccgacgtgct
    13561 tgccggacag ttggctatgc ctgccgcaga tttgtatgcc gcactgttgg aattggaatt
    13621 ggacggcagc gttgccgcaa tgcccggcgg cagataccag cgtatccgaa cttgaacgca
    13681 ctttatatta aggaacacga atgaccgaag tcatcgccta cctcatcgaa catttccaag
    13741 atttcgatac ctgcccgccg cccgaagact tgggtatgct gcttgaagaa gcgggtttcg
    13801 atacgatgga aatcggcaac accctgatga tgatggaagt attgctcaac agctccgaat
    13861 tttccgccga acccgccggc agcggcgcat tgcgcgtgta cagcaaagaa gaaaccgaca
    13921 acctgccgca ggaagtgatg gggctgatgc agtatctgat tgaagaaaaa gccgtcagct
    13981 gcgaacagcg ggaaatcatc atccacgcgc tcatgcacat ccccggcgac gaaattaccg
    14041 tagataccgc caaagtgctg accctgctgc ttttatgggc aaacaagagc gagctgcccg
    14101 tgttggtcgg cgacgagctg atgagcgcgc ttttactcga caacaaaccc acgatgaact
    14161 gaagcggctt cagacggccc gcccgaggcc gtctgaaaca ccggcatcaa aaccaccatc
    14221 cagagaacga caaatggcaa aaaacctctt aatcgtcgaa tccccgtcca aagccaaaac
    14281 cctgaaaaaa tatttgggcg gcgattttga aatcctcgcg tcctacggac acgtccgcga
    14341 cctcgtcccc aaaagcggcg cggtcgatcc cgacaacggc tttgcgatga aataccaact
    14401 catcagccgc aacggcaaac atgtcgatgc gattgttgcc gctgccaaag aagccgaaaa
    14461 catctacctc gcaaccgacc cggacaggga aggcgaagcc atttcctggc atcttttgga
    14521 aatcctcaaa tccaaacgcg gcctgaaaaa catcaagccg cagcgtgtcg tgtttcacga
    14581 aatcaccaaa aacgccgtcc tcgatgctgt cgccaacccg cgcgaaatcg aaatggactt
    14641 ggtcgatgcg caacaagccc gccgcgcttt ggactatttg gtcggtttca acctttctcc
    14701 attgttgtgg aaaaaaatcc gtcgcggttt gagcgcgggc cgtgtacaaa gccccgcact
    14761 gcgtttgatt tgcgaacgcg aaaacgaaat ccgcgcgttt gaagcgcagg aatattggac
    14821 ggtacatcta gacagccaca aaggccgcag caagttcacc gccaaactcg cccaatacaa
    14881 cggcgcgaaa ctcgaacaat tcgacctgcc ggacgaagcc gctcaagccg acgtgttgaa
    14941 agaactcgaa ggcaaagagg ctgtcgttac tgccattgaa aagaaaaagc gcagccgcaa
    15001 tcccgccgcg ccgttcacca catccaccat gcagcaggat gccgtgcgca aactcggctt
    15061 caccaccgac cgcaccatgc gtaccgccca gcagctttac gaaggtatag acgtagggca
    15121 gggcgccatc ggtctgatta cctatatgcg taccgacagc gtgaatttgg ctgacgaagc
    15181 gttaaccgaa atccgccatt acattgaaaa caaaatcggc aaagaatatc tgccgagtgc
    15241 cgccaaacaa tacaaaacca aatccaaaaa cgcccaagaa gcccatgaag cgatccgccc
    15301 gacttccgtg taccgcacgc ccgaaagcgt caaacccttc ctgagtgcag accagttcaa
    15361 actctatcaa atgatttggc agcgtaccgt tgcctgtcag atgacgcccg ccaaattcga
    15421 ccaaaccacc gtcgatatta ccgtcggcaa aggcgtgttc cgagtaaccg gacaagtgca
    15481 aaccttcgca ggcttcctca gcgtttacga agaaagcagc gacgacgaag agagcgaaga
    15541 cagcaaaaaa ctgcccgaaa tgagcgaagg cgacaaattg ccggtcgaca aactctacgg
    15601 cgaacaacac ttcaccaccc cgccgccgcg ctacaacgaa gccacactgg ttaaagccct
    15661 tgaagaatac ggcatcggcc gcccctcgac ctacgccagc atcatctcca cgctcaaaga
    15721 ccgcgaatac gttacccttg agcaaaaacg cttcatgccc accgacacag gcgacatcgt
    15781 caataaattc ctgaccgaac acttcgccca atacgtcgat taccacttca ccgccaaact
    15841 cgaagaccag cttgacgaaa tcgccgacgg caaacgccgc tggattcccg tgatggacaa
    15901 attctggaaa ccgttcatca aacaagtgga agaaaaagag ggcatcgaac gcgccaaatt
    15961 taccacgcag gaacttaacg aaacctgccc gaaatgcggc gaacacaaac tgcaaatcaa
    16021 gttcggcaaa atgggccgct tcgtcgcctg cgccggctat cccgaatgca gctacacgcg
    16081 caacgtcaac gaaaccgccg aagaagccgc cgagcgcatc gccaaagccg aggctgaaca
    16141 agccgaactc gacggacgcg aatgccccaa atgcggcggt cggttagcgt ataaatacag
    16201 ccgtaccggc agcaaattca tcggttgcgc caactacccc aaatgcaaac acgtcgagcc
    16261 gttggaaaaa cccaaagata ccggcgtcca atgcccgcaa tgcaaaaaag gcaacctcgt
    16321 cgagcgcaaa tcccgctacg gcaaactgtt ttacagttgc agcacctatc ccgactgcaa
    16381 ctacgccact tggaacccgc ccgttgccga agaatgcccg aactgccatt ggccggtctt
    16441 gaccatcaaa accactaaac gccggggcgt ggaaaaagtc tgtccgcaaa aagaatgcgg
    16501 ctggaaagaa caaatcgaac cgcctgcacc gcaagagtga agcggttggg attgagatga
    16561 aagaaaatgc cgtctgaaag gggtttcaga cggcatttgt aaattagaag gggctgtccc
    16621 agatggctgg ggaaatttaa attaagtcag aattatccct atgagaaaag ccgtccaagc
    16681 cggtacaaac aaaagaaacc catcggactg tttgccgcag gggtaactgc aagaacggca
    16741 gcagggttgg cagcagttaa tcaaaacacg gcagcctgtt attttctatg gcgaaatagt
    16801 gtttggcaca tcatcgggaa aacttccttt acacgcattt ggacgaaatc tgcgaaatta
    16861 tggaggcata cgacatatcg tttacgatta cttatccgtc aaaacagtcc gcatttggaa
    16921 atgtatgacg gcgaagcagg ggcgggtgaa agttatttcc gtaaaggcag acgcggccgc
    16981 agtgccgccg gcaaagccgc cgtattcggg cttttgaagc gcaacggcaa ggtttgtacg
    17041 gttactgtcg gacactcgaa ccgctatttt attgcctatt atccgcggac gggtgaaacc
    17101 cggcagcatt gtttatacgg attgttcgta gttacgatgt atcagattgt aagcggattt
    17161 ggccgtttcc gtatcaatcg cggcacacat tttgccgaac ggcaaaacca tatcaacgca
    17221 attgggaact tttggaatcg ggcaaacgtc atttgcgcaa gtttgacggc attcccaaag
    17281 agcatttcgg gctgtatttg aaggagtgcg gacggcgttt tgacaacagt ggggtaaaag
    17341 ttcgaatttc cattttaaaa caattggtaa agcaggattt atcccggttg gccggaattt
    17401 taaaaaataa atacattctt taacaaaaaa aatcatatcc cggcaaaaca aatctgataa
    17461 aatacttggc gtttattaac aatcttttta ataatttaat cttagatatt cggagttgat
    17521 atgcatacgg tcgacaaaaa acttctct
//
LOCUS       DAXGCP010000042        17415 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.042, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000042 DAXGCP010000000
VERSION     DAXGCP010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17415
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.042"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            200..2206
                     /locus_tag="ACFJCW_001212"
     CDS             200..2206
                     /locus_tag="ACFJCW_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HFC4151356.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFNPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TAPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVGRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGGIIALMALLKIRIGTLDLSPFLASLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLSKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIINHPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGFGTFVLGIFSVLAIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKGQGHPPSDKP"
     gene            complement(2329..3420)
                     /gene="mltB"
                     /locus_tag="ACFJCW_001213"
     CDS             complement(2329..3420)
                     /gene="mltB"
                     /locus_tag="ACFJCW_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HFC4151357.1"
                     /translation="MEKRKILPLAICLAALSACTAMEARTPRANEAQAPRADEMKKES
                     RPAFDAAAVPVSDSGFAANANVRRFVDDEVGKGDFSQAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGRAKFHGARRFYAENRAVIDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGETLADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(3568..4995)
                     /locus_tag="ACFJCW_001214"
     CDS             complement(3568..4995)
                     /locus_tag="ACFJCW_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC4151358.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEGK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGGEAQVAQGLDMIFKGEGGGLGVTEPETSGAAIAREMQSCYEYTDEQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSRGDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILDNLNRYVRNDIRFV
                     DYERREIQRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHPAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGIKLDKN
                     QTLLDRLQTDVRFAAVARDYALPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     EEHEDTTAFLLNDIRKDILDCRYCG"
     gene            5180..8884
                     /gene="mfd"
                     /locus_tag="ACFJCW_001215"
     CDS             5180..8884
                     /gene="mfd"
                     /locus_tag="ACFJCW_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HFC4151359.1"
                     /translation="MTCPIPKPREKSRWFNLSQGSLPLALARYLPHKRLKAVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKTDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSETPYRIDLFDDEIDSIKTFDTDTQRTISPVSEIRLLPAHEFPTDSEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWNDVKSRYAMAQGDETYPPLLPQHLYLSADVFAGRLKNYGQVLP
                     DVSGKAHSLPDLAVNRQSDDPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSSSQQQTVPASEGEGKAVTDQTE
                     FSASATNPLPSPLPQEREQSAAAVSDGLKAAAVSTESSLYLVASDLHGQTRQQSAPSP
                     VGEGWGEGKAVAAQSAIAVITESDLYQYVARSRVHNRRKKHAAVSDGLLRDLAEINIG
                     DPVVHEEHGIGRYTGLVTMDLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHE
                     SVALHKLGSGAWNKAKRKAAEKARDTAAELLNLYAQRAAQSGHKFEINESDYQAFADG
                     FGYEETEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAV
                     LAPTTLLVEQHAQNFADRFADFPVKVASLSRFNNSKATKATLEGMADGTVDIVIGTHK
                     LVQDDIKFKNLGLLIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGL
                     RDFSLITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRER
                     LETLLPEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIIN
                     RADKFGLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLA
                     MQDLEIRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEI
                     KLHSPALLPEDYCPDIHERLVLYKRLAVCETVQKINAIHEELVDRFGLTEQPVKTLIE
                     SHHLRLAAKELGIDAIDATSEAVTVTFGKHHCIDPTGIILLIQTDKKYRLAGADKLRF
                     AAEMENIEVRINTVKTVLKTLQSKRLPKGN"
     gene            9110..9412
                     /locus_tag="ACFJCW_001216"
     CDS             9110..9412
                     /locus_tag="ACFJCW_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2004 domain-containing protein"
                     /protein_id="HFC4151360.1"
                     /translation="MDAFAAFLSELEKADDAARAALTEYLKRDSRYIDFHTEDTQTSR
                     DAAKFVRTMQLIYISLWAKNPAFAVMDYMPANMESDEILAVKLHLDGSIFSIDWES"
     gene            9574..9957
                     /gene="panD"
                     /locus_tag="ACFJCW_001217"
     CDS             9574..9957
                     /gene="panD"
                     /locus_tag="ACFJCW_001217"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HFC4151361.1"
                     /translation="MFRTILGGKIHRATVTEADLNYVGSITVDQDLLDAAGICPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYIQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            9979..10821
                     /gene="kdsA"
                     /locus_tag="ACFJCW_001218"
     CDS             9979..10821
                     /gene="kdsA"
                     /locus_tag="ACFJCW_001218"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HFC4151362.1"
                     /translation="MDIKINDITLGNNSPFVLFGGINVLEDLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFREAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLENFLIRIKALDDLIKSQPI
                     LTIE"
     gene            10836..11276
                     /locus_tag="ACFJCW_001219"
     CDS             10836..11276
                     /locus_tag="ACFJCW_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HFC4151363.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIAAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGTVLAAAFAALTRRQTALLLFLLSALAANQFLVTPVIEALKYG
                     HENWLLSVAGGSFGMWHGISSMTFMATALLSAVLSWRLSGKEAV"
     gene            11323..12609
                     /gene="eno"
                     /locus_tag="ACFJCW_001220"
     CDS             11323..12609
                     /gene="eno"
                     /locus_tag="ACFJCW_001220"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HFC4151364.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYSGKGVLKAVEHVNNQIAQALIGIDANEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDSGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEAAEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGKKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKCNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAAYYPGKAAFYQLGK"
     gene            12777..13055
                     /gene="ftsB"
                     /locus_tag="ACFJCW_001221"
     CDS             12777..13055
                     /gene="ftsB"
                     /locus_tag="ACFJCW_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HFC4151365.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(13096..13386)
                     /gene="yfaE"
                     /locus_tag="ACFJCW_001222"
     CDS             complement(13096..13386)
                     /gene="yfaE"
                     /locus_tag="ACFJCW_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HFC4151366.1"
                     /translation="MARIGTNKGLFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLAGEDEGLSDSLLK"
     gene            complement(13507..14640)
                     /gene="nrdB"
                     /locus_tag="ACFJCW_001223"
     CDS             complement(13507..14640)
                     /gene="nrdB"
                     /locus_tag="ACFJCW_001223"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HFC4151367.1"
                     /translation="MSYSTFPKTKNDALKEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWVETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGVHNVGGKPVTVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDPEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLSAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(14953..17232)
                     /gene="nrdA"
                     /locus_tag="ACFJCW_001224"
     CDS             complement(14953..17232)
                     /gene="nrdA"
                     /locus_tag="ACFJCW_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HFC4151368.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYNHVKKITDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTRQIYETPQFLYVLVAMCLFSKYPKEVRLGYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVSGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPRVAPVHQSNLCMEIALPTKP
                     LDNINDPDGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMDRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQAISANTAYDPGKFEGNKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
BASE COUNT         4193 a         4945 c         4321 g         3956 t
ORIGIN      
        1 aatctagtac agacccgccg aaattgttat aatcgaaaaa attaaaaatc aatacggatt
       61 attctatcag attgatttat cgatatttat tatatcatta atatagtttg atttcaaacc
      121 ggcggaaaat gcgccgcccg ccgcagatgc gccctccccg ccatcggggc gtttaacgcc
      181 ggattgccga tgcggtacaa tggcagatat gaagaaaatt acccctcaaa acctgcgtcc
      241 cctgctttcg gaaagcttgg gacataccga ttttgtcaac gtcctcaacg cattgattaa
      301 atttttgcgc cgtggcggca aaaaatgtgc gggggagcgt ttcgacctga ttatcgacac
      361 attcaaacaa gacagggaat tactgtcccg cttcagccgg tgtttttaca tctggctcgc
      421 gcaaatacac atttatccgg cactcatcaa actcggcatt ttctcgcgcc acagctttgc
      481 ccgggaaatg ggcatacgca tatacgaacg cttcaacccg tcatataaag attttgccaa
      541 cttgggcgaa gtcttccttt atcttttcca ttccgaaaac gacgacaaat ggctgcaaac
      601 gctcaatatc cgccaatggc tggttttata cgaactcatc cgtagccacg ccgagccgtc
      661 caaattgcag acggcgggca tccgccttgc cgatgcgcgt ttgcgcgcca tcgaaatgct
      721 gtctgtctgg acggcatccg aagccatcga acccgatctc atccgtatcg ccccgcgcct
      781 gctggaagcc gattcttcct tcgtcgccct ccaacgcgaa accgccaaac tggtcgaaca
      841 ctaccgcaac ggcaccgcgc cttacgacac cgcccacctc gaagtgatgt tcgaccaatg
      901 tttcagccag attgactatt tgcgtcgcaa agggacgggc gccggctccg gttcgtcggt
      961 caaagtcgcc cacctgctcg aacgactccg gcagaccgta ggccgtctga agctgctcac
     1021 agacatacaa accggtgccg gcaacagcaa ccgcctgacc atcgccctga tgaactccct
     1081 catctacgcg gcggtcgaac aatacagcac ccgccacctg cgccgcagca gcatccgtat
     1141 gctcgcccgc agcattaccg aaaacaaaag ccaccacggc gaacactaca tcacccgcaa
     1201 ccgcaaagaa tatttcaaaa tgttctactc ggcagcaggc ggcggcggca tcatcgccct
     1261 gatggcgctg ctcaaaatcc gcatcggcac actcgacctc agtcccttcc tcgcttcctt
     1321 gtcggctggg ttcaactacg gcatcggctt tatgatcatc catatgctgc actgcaccgt
     1381 cgccaccaag cagcccgcga tgactgccgc cagctttgcc gaacaggtcg atctcaacga
     1441 aggcggcaaa gcggtggaca acaaactctc caagctcctc atcgacgtat gccgctccca
     1501 aagcgtcgcc gtcttcggca acgtttccat cgccatcctt ttggcgtgcg ccatatcgtt
     1561 cggctatgcc catctgtacc ggctgcccat actcgatgcc cacaccgccg cctaccagtt
     1621 caaatccata gacatcatca atcatcctac cctatggtat gccgctattg caggcttgtg
     1681 gctgttctgc tccggcatca tcgcaggttt tttcgacaac cgcgccgact acctcaacct
     1741 gcgccaacgc ctgcccttca atcccttgct gcgtaaaatc atgcgccccg ggccccgccg
     1801 cgtcctcgcc gcctacatcc acaaacacta cggctcgctg gtcggcaact tcatcttcgg
     1861 aatgctcttg ggtatgaccg gctatttcgg acacctcctc gggctgccgc tggacatccg
     1921 ccacgtcgcc ttttcctccg ccaacctcgg ctatgccgcc gtcagcggca acgtcggctt
     1981 tggtacattc gtactcggca ttttcagcgt cctcgccatc ggcttggtca acctctgcgt
     2041 cagcttcagc ctcgccctct tcgtcgccct gcgctcgcgc ggcacaaaaa tcggcagcat
     2101 ccgcaacctg atcaaaagtt tttggaatca gattaaaagc aatccttgca tacttttcct
     2161 cccgcccgcc aaaggacagg gacatcctcc ttcggacaag ccttgaccgg caatgccgtc
     2221 tgaaacggga ttcgccccga ataccgccct gatgcgggaa atccccataa aaggatgcaa
     2281 aaatgccgtc tgaaccgaaa cgtggttcag acagcatttt aaaaaacatt acaatcccgg
     2341 gccgccgagc gaattggcaa tgtccctgac cgccgttaca tacatccggc tgtggttgta
     2401 ctgccatacc gtataaaaat tgttcaagcc caaataatat tcaaacacgc cgggtgcggt
     2461 ttccagtttg aacaaaaccg ccttttcatc atctgcgagc gtttccccgg ggatgatgcc
     2521 gtacgccttc aaatccgcca ccgtccgcgt cagggcggtt ttttcgccaa tgattgcctg
     2581 aacatccgca cccggcgcca acgtcgccga caccaacatt ttaccgcccg tgcgccaacc
     2641 gtgctgcttc atataattgg caaccgatgc cgcgacatca ccgacgttgc cccatatatc
     2701 ccgatgtccg tccccgtcat aatccaccgc ccatttccgg tagctcgaag gcataaattg
     2761 cggcataccc attgcgcccg catagctgcc cttaaaggcg aaaacatcgc cgccttcttc
     2821 ttttgccagc tttaaaagct cgaccaattc tttttggaaa aacccggcgc ggcggggata
     2881 atcaaagcct aaggtcgcca atgcgtccgc cacacggaag ctgcccgtat ttttgccgta
     2941 attcgtttca atcccgataa tcgccacgat aagctcggca ggcacgccgt atttttgcgc
     3001 cacatcatcg ataaccgcgc ggttttccgc ataaaacctg cgcgcgccgt gaaatttcgc
     3061 cctgcccgaa tttcccgtgc ggaacacata ccacggacgc gatgtggagg gtcggtgcat
     3121 aatcttgacg atgtccgcct tgtaagccgc tttgtcaaaa aaatcctgcc attccgcctg
     3181 ggaaaaatcc cctttcccga cttcatcgtc cacaaaacgg cggacatttg cattggcggc
     3241 aaacccgctg tcggataccg gtacggctgc cgcgtcaaac gcggggcggc tttctttttt
     3301 catttcatcc gcgcgggggg cttgggcttc atttgcccgg ggtgtgcggg cctccatcgc
     3361 cgtacaggca gacaaagccg ccaaacaaat tgccagcggc agtatttttc tcttttccat
     3421 aaacacattc cgaacaaata gggtaagtgg gaaagcggca caagggtgag gcgcgaaatg
     3481 cggtatccgc cgcaatcggc ggttttgcag aatgccgcgc gttgcctttt gcgccgcccg
     3541 aaatctgcct gccgccgtat ttgcccgcta tccgcaatat cggcagtcca atatatcttt
     3601 gcggatgtcg ttcagcagga aggctgtggt gtcttcgtgt tcctcctgta cgaagacaaa
     3661 gagtcgggcg atgattttgc cgatgaagac tttttgcagg gcgcaggcgt cggtcagggt
     3721 gtgttcctgc aggaagctgc ggatgtcttc gggcaaagcg tagtcgcggg caacggcggc
     3781 aaagcggaca tcggtttgca ggcggtcgag cagggtttgg tttttgtcca acttaatgcc
     3841 tgcttctttt tcttcggcgg tggcgcggac gaactggtcg taaatttcgg cataaagcat
     3901 atcgttcggg ccttcaaaaa tcgtgaaggg gcggatatcg atggcgatat tgccggctgg
     3961 atgtccgcgt tcaaaaccct tcgcgcccaa gagtttttgc aacatttgcg cggcggcgta
     4021 agtgtattcc gtggcgaggg ttttgacgat gttcgcctcc atcaattgat gggcgacggg
     4081 cgcgacgggc gaaacggaat ggcagacgta gcggtaaagg atttcggaaa cctgatggcg
     4141 gcgttggatt tcgcggcgtt cgtaatcgac gaatctgata tcgttgcgga catatcggtt
     4201 caggttgtca aggatgtatt ccataatgcc gtgcgtcatg ccgatcagtt gcaggcggct
     4261 gcggataaag atgttttgga acgcgcgcaa accggcagcg tcgccccggg agagtttcat
     4321 cacggcggtt gcaggcattt cggcatcgat gcggttgacg gcgtaacgga cggcgcgcag
     4381 gccttcggat gcgagggttt cgcagcggat gtatgttttg gggacgagca gcaggtcgat
     4441 gactttggcg agtttgccgt ttttgcgctc tttggcggca acgaggagga agtcgctttg
     4501 cgaattgccc tgccagtatt tcgcggcgtt gacgtaaatg gtttgttcgt cggtatattc
     4561 gtagcaggac tgcatttcgc gtgcaatcgc cgcgccggag gtttcgggtt cggtaacgcc
     4621 caaaccgccg ccttcgcctt tgaaaatcat gtccaaacct tgtgcgactt gcgcttcgcc
     4681 gccgaactct tgcagaggct gcaacaccag cgcgccttcg atgccggtac gcagcgtaac
     4741 gggcacgccg taatgccccg caatccttag gacttcttgg atttcaaact gactgccctt
     4801 gcgcccgccg tgttttttgt cgaggaaggg caacagcaaa cccgcctgct tcaaggcaag
     4861 ccatttgcct tcgggcaggt atcgcatcag gtcgatgccg tctgaaaaaa tgcggcggaa
     4921 tgcggattcg atgtgcttta aaaaagcagc cgtgtccatg gttgacggct gcgcgctcgg
     4981 ttcggtgtgt atcatcggct tcctctgtcg gttcccatta atcggcggcc ggtcaaaccg
     5041 cctgccacag tttagagtta attttctaaa ctttaccaca aagtgcaccg ggcaacaatc
     5101 cgccggcctt tcagacggca tcgcgcaccc tcacgtgcta aaatgaccgt ttgcatcact
     5161 gtccgccgat tgccgcacta tgacctgccc catccccaaa ccccgtgaaa aatcccgttg
     5221 gttcaatctt tcgcaaggct cgctgccctt ggctttggcg cgttatttgc cgcacaagcg
     5281 gctcaaagcc gtgctgaccc aagatgcgga acaggcgttg cgccttcaga cggcatggcg
     5341 gtttttccgt ccgcacgaca cggcggtgtt cctgccggac tgggaaacgc tgccttacga
     5401 gcgtttttct ccgcatcagg atttggtgtc ggagcggctg tcggcgttgt ggcagattaa
     5461 aagcggcgcg gcggacgtgt tgttcgtacc ggttgccacg gcgatgcaga agctgccgcc
     5521 cgtgccgttt ttggcggggc gcacgttttg gctgaaaacg gggcagactt tggatatagg
     5581 ccgcctgaaa accgatttgg tggatgcggg ctacaatcat gtttcccacg ttgtcgcggc
     5641 gggcgagttt gccgtgcgcg gcggcattgt cgatttgttc ccgatgggca gcgaaacgcc
     5701 gtaccgcatc gatttgtttg acgatgaaat cgacagcatt aaaaccttcg ataccgacac
     5761 gcagcgcacc atttcccccg tttccgaaat ccgcctgctg ccggcgcacg agttccccac
     5821 cgacagcgag gcgcaaaaaa tcttccgcag ccgcttccgc gaggaagtcg acggtaatcc
     5881 gaacgatgcc gccgtgtaca aagccgtcag caacggccac ttcggcgcgg gcgtggaata
     5941 ttatctgccg ctgttttttg aaaacgagct ggaaacgctg tttgactata tcggcgaaga
     6001 tgcgctgttt gtctctttgg gcgatgttca tgccgaggca aaccgctttt ggaacgacgt
     6061 taaatcacgt tacgccatgg cgcagggcga cgaaacctat ccgcctttgc ttccacagca
     6121 tttgtatctc tctgccgatg tgttcgcagg ccgtctgaaa aactacggac aagttctgcc
     6181 tgatgtttcc ggcaaggcac actccctgcc cgaccttgcc gtcaaccgcc aatccgacga
     6241 tcctttgcag gcattgaagg attttcagac ggcctttgac gggcggattt tgctgtgcgc
     6301 cgaaagtttg ggacggcgcg aaaccatgct cggtttcttg cagcaaaacg gtttgaaagc
     6361 caaacctgtg tccgactggc agggcttctt gtcggcgcac gagccgctga tgattacggt
     6421 cgcgccgttg gcttacggat tcaaactggg cggactgcaa tcttcaagcc aacagcaaac
     6481 tgttcccgcc tccgagggag aaggcaaagc ggttaccgac caaaccgaat tttccgcatc
     6541 cgcaacaaac cctctcccca gccctctccc gcaggagagg gaacaaagtg ccgccgccgt
     6601 ttcagacggc ctgaaagcag ccgccgtttc aaccgaaagc agcctgtatc tcgtcgcaag
     6661 tgatctgcac gggcaaaccc gacagcaatc tgccccctcc cccgtggggg agggttgggg
     6721 agagggcaaa gcggttgccg ctcaaagtgc catcgccgtc atcaccgaat ccgatcttta
     6781 ccaatacgtc gcccgttcgc gcgtccacaa ccgccgtaag aaacacgccg ccgtttcaga
     6841 cggcctgttg cgcgaccttg ccgaaatcaa tatcggcgat cccgtcgtgc acgaagaaca
     6901 cggcatcggg cggtatacgg gcttggtaac gatggattta ggcggcgaaa ccaacgaaat
     6961 gatgttgctc gaatacgcgg gcgaagcgca gctttatgtg cctgtttcgc aactgcattt
     7021 aatcagccgc tactccggtc aggcgcatga aagcgtcgcc ctgcacaagc tcggcagcgg
     7081 cgcgtggaac aaggcgaagc gcaaagccgc cgaaaaagcg cgcgataccg ccgccgagtt
     7141 gctcaacctc tacgcccaac gcgccgccca atcgggacac aagtttgaaa tcaacgagtc
     7201 ggactatcag gcgtttgccg acggcttcgg ctacgaggaa accgaagacc aggccgccgc
     7261 catcgccgcc gtgattaaag atttgacgca ggcgaagccg atggaccgac ttgtgtgcgg
     7321 cgatgtcggt ttcggcaaaa ccgaagtcgc cctgcgcgcc gcgtttgtgg cggtgatggg
     7381 cggcaaacag gtcgccgtac tcgccccgac cacgcttctg gtcgagcagc acgcgcaaaa
     7441 ctttgccgac cgtttcgccg atttccccgt aaaagtcgcc agcctttcac gtttcaacaa
     7501 cagcaaagcc accaaagcca cgctcgaagg catggcggac ggcacggtcg atatcgttat
     7561 cggcacgcac aaattggtgc aggacgacat caaattcaaa aacttaggtt tattgattat
     7621 cgatgaagaa caccgcttcg gcgtgcgaca gaaagagcag ctcaaacgcc tgcgcgccaa
     7681 tgtcgacatc ctaaccatga ccgccacgcc gattccgcgc accctcagca tggcgctcga
     7741 aggtctgcgc gacttctcgc tgattaccac tgcaccgagc cgccgcctcg ccgtgaaaac
     7801 ctttgtcaaa ccgttcagcg aaggcagcgt gcgcgaagcc gtgttgcgcg aactcaaacg
     7861 cggaggacag gtatttttcc tgcacaatga agtagatacg attgagaata tgcgcgagcg
     7921 gctggaaacc ctgctgcccg aagcccgtat cggcgtggcg cacggacaac tgcgtgagcg
     7981 cgagctggaa caagtcatgc gcgacttttt gcagcaaaga ttcaatgtgt tgctctgttc
     8041 caccatcatc gaaaccggca tcgacatccc caacgccaac accatcatca tcaaccgcgc
     8101 cgacaaattc gggctggccc aactgcacca gcttcgcgga cgcgtcggcc gcagccacca
     8161 ccaagcctac gcctacctgc tcacgcccga atacattacc aaagacgcag aaaaacgcct
     8221 cgacgccatc gcggcggcag acgaactcgg cgcaggtttc accctcgcca tgcaggattt
     8281 ggaaatccga ggcgcaggcg aaatcctcgg cgaaggacaa tccggcgaaa tgatgcaggt
     8341 cggcttcacg ctctacaccg aaatgctcaa acaggccgtg cgcgacctca aaaaaggccg
     8401 ccaacccgac ctcgacgcac cgttgggcat taccaccgaa atcaaactgc acagcccggc
     8461 attactgcct gaagactact gccccgacat ccacgagcgc ctcgtcctct acaaacgcct
     8521 cgccgtatgc gaaaccgtgc agaaaatcaa cgccatacac gaagaactcg tcgaccgctt
     8581 cggcctgacc gaacaacccg tcaaaaccct cattgaaagc caccacctgc ggcttgcggc
     8641 aaaagaactg ggtattgatg ccatcgatgc cacaagtgaa gccgtaaccg ttaccttcgg
     8701 caaacaccac tgtatcgacc cgacggggat tatcctgctg attcagacgg ataaaaaata
     8761 ccggctggca ggggcagaca aattgaggtt tgcagcggaa atggaaaaca tcgaggtcag
     8821 gatcaatacc gtcaaaaccg tactaaaaac cctgcaaagc aaacgcctgc ccaaaggaaa
     8881 ttgatgtaac gatgccgtct gaagaacacc gttcagacgg catacaatcc cccaatcctc
     8941 accaaaagga acaatcatgt cgatttttca cccctatttc caacaactgt ccaccgaagg
     9001 ttttgacgga gaagaagatg tcctctggga agacgagctg accgtcaaag gcaatcttgt
     9061 cgaggtattc ctgtaggcag aaaatgaaaa cagcctgcca accgaaacat tggatgcatt
     9121 tgccgccttc ctgtccgaat tggaaaaagc cgacgatgct gcacgcgccg cactgacgga
     9181 atatttgaaa cgggacagcc gctatatcga ctttcacacc gaagataccc aaacaagccg
     9241 tgatgcggca aaatttgtcc gcactatgca gttgatctat atcagcttat gggcaaaaaa
     9301 tccggctttt gccgttatgg attatatgcc cgccaatatg gaaagcgacg aaatccttgc
     9361 cgtcaaactg catttggacg gcagcatttt ctcaatcgat tgggagagtt gagccggatt
     9421 gccaatcggc aaaaatgaaa tgccgtctga aaacagcttc cctgcccgaa gccttgccat
     9481 tatgaatttg aaggaaactc cactataata cggcattcag attttcagac ggcatcacgc
     9541 ccgtcagacc gcacacaaac caaaaggaaa tacatgttcc gtactatact tggcggaaaa
     9601 atccaccgcg ccaccgtaac cgaagccgat ttaaactacg tcggcagcat taccgtcgat
     9661 caagacctgt tagacgcggc aggcatctgc cccaacgaaa aagtcgccat cgtcaacaac
     9721 aacaacggcg aacgttttga aacctatacc attgcaggga aacgcggcag cggcgtgatt
     9781 tgcctgaacg gtgctgcagc caggctggta cagaaaggcg acatcgtcat cattatgtct
     9841 tatatccaac tttccgaacc ggaaatcgcc gcacacgaac ccaaagtcgt cttagtggac
     9901 ggaaacaata aaatccgcga catcatctcc tacgagccgc cgcacaccgt actgtaatcc
     9961 cgcaaacgga catcgattat ggatattaaa atcaacgaca tcaccctcgg caacaattcg
    10021 cctttcgtcc tattcggcgg catcaacgtt ttagaagatt tggattccac cctccaaacc
    10081 tgtgcgcatt acgtcgaagt tacccgcaaa ctgggcatcc cctatatctt taaagcctct
    10141 ttcgacaagg caaaccgctc gtctatccat tcctatcgcg gcgtaggctt ggaagaaggc
    10201 ttaaagattt ttgaaaaagt caaagcagag ttcggcatcc ccgtcattac cgacgtacac
    10261 gaaccccatc aatgccaacc cgtcgccgaa gtgtgcgatg tcatccagct tcccgccttt
    10321 cttgcgcggc agaccgattt ggtggccgca atggcggaaa cgggcaatgt tatcaacatc
    10381 aaaaaacccc agttcctcag cccttcgcaa atgaaaaaca tcgtggaaaa attccgcgaa
    10441 gccggcaacg ggaagctgat tttatgcgaa cgcggcagca gcttcggcta cgacaacctc
    10501 gttgtcgata tgctcggttt cggcgtgatg aaacaaacct gcggcaacct gccggttatt
    10561 ttcgacgtta cccattccct gcaaacccgc gatgccggtt ctgccgcatc cggcggtcgt
    10621 cgcgcacagg ctttggattt ggcacttgca ggcatggcaa cccgccttgc cggcctgttc
    10681 ctcgaatcgc accccgatcc gaaactggca aaatgcgacg gccccagcgc gctgccgcta
    10741 caccttttag aaaatttttt aatccgcatc aaagcattgg acgatttaat caaatcacaa
    10801 ccgattttaa caatcgagta acacggtttc gccttatgat gcagactttc cgaaaaatca
    10861 gcctgtatgc cgcaaccttg tggctcggta tgcagattat ggcaggttat atcgccgcac
    10921 cggtgctgtt caaaatgctg cccaaaatgc aggcgggcga aattgccggc gtattgttcg
    10981 acatcctctc ttggagcggg cttgccgttt ggggcacggt actggctgcc gcctttgccg
    11041 ccctaacccg gcggcaaacc gccctgctgc tttttttatt gtccgccctt gccgccaacc
    11101 aatttttggt tacacccgtt atcgaggcac tgaaatacgg gcatgaaaat tggctgttgt
    11161 cggttgcagg cggatccttc ggaatgtggc acggtatttc cagcatgact ttcatggcaa
    11221 ccgccctact ttcagcagtt ttaagttggc ggctttccgg caaagaggcc gtctgaagcc
    11281 ctcccatttt ttacctccct tcacttcact tggagaacat tcatgagcgc aatcgttgat
    11341 attttcgccc gcgaaatttt ggactcgcgc ggcaacccca cagtcgagtg tgatgtattg
    11401 ctcgaatccg gcgtaatggg acgtgcggcc gtaccgagcg gcgcatccac cggtcagaaa
    11461 gaagctttgg aacttcgcga cggcgacaaa tcccgctatt ccggcaaagg cgtattgaag
    11521 gcggtcgaac acgtcaacaa ccaaatcgcc caagccctca tcggtatcga tgccaacgag
    11581 caatcttata tcgaccaaat catgatcgaa ttggacggta ctgaaaacaa aggcaatttg
    11641 ggtgcgaatg cgactttggc ggtctctatg gcggttgcac gcgccgctgc cgaagactca
    11701 ggcctgccgc tttaccgcta cttgggcggc gcaggtccga tgtccctgcc cgtaccgatg
    11761 atgaacgtca tcaacggcgg cgaacacgcc aacaacagcc tgaacatcca agagtttatg
    11821 attatgcccg tcggcgcaaa atctttccgc gaagcgttgc gctgcggtgc ggaaattttc
    11881 cacgccttga aaaaactgtg cgacagtaaa ggcttcccga ccacagtcgg cgacgaaggc
    11941 ggtttcgccc ccaacctgaa cagccacaaa gaagccctgc aactgatggt cgaagcggcc
    12001 gaagccgccg gctacaaggc gggcgaagac gtattattcg cattggactg cgcgtccagc
    12061 gagttctaca aagacggcaa ataccacttg gaagccgaag gccgctccta caccaacgcg
    12121 gaatttgccg aatacttgga aggcttggtt aacgaattcc cgattatttc cattgaagac
    12181 gggatggacg aaaacgactg ggaaggctgg aaactgctga ccgaaaaatt gggcaaaaaa
    12241 gttcaattgg tcggcgacga cttgttcgta accaatccga aaattcttgc cgaaggcatc
    12301 gaaaaaggcg tagcaaacgc attgctggtc aaagtcaacc aaatcggtac tttaagcgaa
    12361 accctgaaag ccgtcgatct ggcaaaatgc aaccgctacg ccagcgtgat gagccaccgc
    12421 tccggcgaaa ccgaagacag taccattgcc gacttggcag tcgccaccaa ctgtatgcag
    12481 attaaaaccg gttctttgag ccgttccgac cgcatggcga aatacaacca actgctgcgt
    12541 atcgaggaag aattggcgga agccgcctac taccccggca aagccgcatt ctaccaactg
    12601 ggcaaataaa taaaaaagtg gatgtatgtt tcaacacaca gggcaacaca tgaagcgtcg
    12661 ccctgtgtgt tgacctgatt tggaagaggt tacacctctc ccaaataaag tctaatttta
    12721 ccgccacgaa ggacggacat ccgagtggtg gggtttcaac cagtaaggaa acgttgatga
    12781 agtgggtaac tgtcgtttta tccttcgcac ttgtctgttg ccaatacagc ctgtggttcg
    12841 gcaaaggcag catcggacgc aacagcagtc tgagagaaca gattgccgtt caagaagaaa
    12901 aaaaccagac actcgcccta cgcaatcatt cccttgccgc cgaagtctat gatttggaaa
    12961 acggtcaaga agccatttcg gaaatcgccc gggtagaact gggttatatc caagacggcg
    13021 aaacctttta ccgactcatc aggcataacc ggtaataccg tcaaaaagcc gtccgaacca
    13081 atgttcggac ggcttttatt tcaacaaact gtcagacagc ccctcatcct cccccgccaa
    13141 accgcaatcc agcctgacat ccccctcgac gcaacagcag cacggcagta tctcgtcccg
    13201 ccccaaaaaa gccaaaggcg gctcccgata agtaacgctt ccctccaaaa tctttacccg
    13261 gcacgatccg caatatccgc ttcggcactg atattccacc atatgccccg tccgttccaa
    13321 gccttccaac agggtctcac cctccaagag ctcaaaaagg cccttattcg taccaatgcg
    13381 cgccatttcc gaccaatcaa aaataaaagg aacaataacc gatcctacct gctgtttttc
    13441 ccatcataca acacacaaat gccgtctgaa acatccggct tcagacggca ttttttcaaa
    13501 aaacatttac aactcaaaat cgcccaagtc atccgtattc acttcagaat cgatttgacc
    13561 aatcaaataa gaggatattt ccacttcctg cggcgcgacc tgtacgttgt cggacgacag
    13621 ccacgcatta atccacggaa tcgggttttg atttgcgcct tcaaatccgg ccgacagccc
    13681 caccgcctgc atacgcagat tggtaatata ttcgacgtat tgggataaga tttctttgtt
    13741 caaaccgatc atcgaaccgt ctttaaacaa atatgccgcc cattcttttt cctgttccgc
    13801 cgcttttttg aagagttgga aacattcgtc ctgcaactcg gcggcaattt ccgccatttc
    13861 cggatcatca acacccgaac gcatcagatt aagcatatgc tgcgtgccgg tcaggtgcag
    13921 ggcttcatcg cgggcaatca gtttgatgat tttggcgttg ccttccatca actcacgctc
    13981 agcaaaagca aacgagcagg caaatgaaac gtagaaacgg atggcttcca acacattgac
    14041 gcacatcagg cagagataga gttttttctt caacccgcgc aaagacacag taacgggttt
    14101 tccgccgaca ttgtgcaccc cttcgcccaa caggttgtaa tattgggtgt attcgattaa
    14161 atcatcataa tagcaggcaa tgtcttcggc gcgggcggta atgtattcgt tttcgacaat
    14221 atcatcaaac acgaccgacg gatcattcac aatattgcgg atgatgtggg tatagctgcg
    14281 cgagtggatg gtttcgctga agctccacgt ttcaacccaa gtttccagct cgggaatcga
    14341 aaccaaaggc agcaaggcaa cattcggact gcgcccttgg atggaatcga gcagtgtttg
    14401 atatttcaga ttgctgatga aaatatgttt ttcgtgttcg ggcaggttgg cgtagtcgat
    14461 acggtcgcgc gacacgtcga tttcttccgg ccgccaaaaa aacgacaatt gtttttcaat
    14521 cagtttttca aatacctcgt atttctgctg gtcataacgg gcgacattta ccggctgacc
    14581 gaaaaacatc ggctctttca gcgcgtcgtt tttggttttg ggaaaggtgc tgtatgacat
    14641 gactaggtgt tcgcaggaca taacgtctct ctttttaaaa attagtcgac ttttctatta
    14701 atttttaatt caccatataa aacatgttga attctatcaa taaagtgcca tcctaaaata
    14761 gcaaatacta aaagaacact aataaatata taaaatttat attcaactaa gaatgaccga
    14821 atgacatcca tacttttcct tttctggaaa ataacaactt agcctcatat agtagtaggc
    14881 actaatttaa gaaaatcctt gaagcctcct actatctaga agccttggat atatttcaaa
    14941 aattaacctg ttttaaatct tacaagcccc accagcgcag ccgtcatctt gaatatcggt
    15001 ctgcgtgtcg tccgcgccgt cgcgggtgtt gtggtagtac agggttttga cgccgtattt
    15061 gtaggcagtc agcaggtctt tgagcatttg tttcatagaa actttgttac cttcgaattt
    15121 gcccgggtcg taagcagtgt tggcggaaat cgcctgatcg acgaattttt gcattacgcc
    15181 gacaagtttc aggtagcctt cgttgcccgg aagctgccac agggtttcgt aggcattttt
    15241 caaggtttca aactccggca cgacttgttt caaaatgccg tctttcgatg ctttgaccgt
    15301 taccaatccg cgcggcggct cgatgccgtt ggttgcgttg gcgatttgcg agctggtttc
    15361 agacggcatg agcgcggtca gagtagagtt gcgcaggccg tatttgacga tgtcggcacg
    15421 caggctttcc cagtcgtaat gcaaaggctc gccgcagacg gcatccaaat cttttttgta
    15481 ggtgtcgatg ggcagtttgc cttgcgaata aacggtttgg ttaaagagcg tgcacgctcc
    15541 gtattctttg gcaaggtttg ccgatgcttt gagcaggtaa tactgtatgg cttcaaaggt
    15601 acggtgggtc agaccgagcg cggaaccgtc gctgtagcgg acaccgtttt tcgccagata
    15661 gtaggcgtag ttgatgacac cgatgccgag cgaacgccgg tccatagtag aggtacgcgc
    15721 ggcttctacc ggatatccct gataatctaa aagtgcatcg agtgcgcgca cggtcaaatc
    15781 ggcaagccct tccaattcgt ccaagctgtt taatgcaccc aagttgaagg cggacagtgt
    15841 acacagggct atttcgccgt cagggtcgtt gatgttgtcc agcggtttgg tcggcagggc
    15901 gatttccata cacaagttgg actgatgaac aggcgcaacg cgcggatcga acgggctgtg
    15961 cgtattgcag tgatcgacgt tttgaatgta gatgcgcccg gtcccggcac gctcctgcat
    16021 cagcgtggaa aacaggtcgg cagccggaat gatacgcttg cgtatgttcg ggtcttgctc
    16081 gtatttcgta tagagccgct caaattcgtc ttggtcggca aaaaacgctt cgtacaaccc
    16141 cgaaacctcg ttgggcgaaa acagcgtaat gttgccgccc ttaatcaggc gggtgtacag
    16201 caggcggttg atttgcacgc cataatcaag ctggcggata cggttgtctt ccacgccccg
    16261 gttgtttttc aacaccagca ggctttcggc ttcaatatgc cacaaggggt agaacaaggt
    16321 tgccgcgccg ccgcgcacgc caccttgcga acaagatttg accgccgcct gaaacatctt
    16381 aaagaaggga atgcagccgg tatgccgggc ttcaccgccc cggatttcgc tgtccagccc
    16441 gcggatacgt ccggcattga tgccgatgcc cgcgcgttgg gaaacgtatt tcacaatcgc
    16501 gctggtagtg gcattgatgg aatccaaact atcgtcgcat tcaatcagca cacagcttga
    16561 gaactggcgc gtaggcgtac gcacgccgct cataatcggc gtgggcaacg atactttgaa
    16621 tgtggaaacg gcatcgtaaa accgtttgac gtaacccaag cgcacctctt tcgggtattt
    16681 gctgaaaagg cacatcgcca ccaaaacata taaaaactgc ggcgtttcgt aaatctggcg
    16741 ggtaacgcgg ttctgtacca gatatttgcc ttcgagctgt ttgacggcgg cataggaaaa
    16801 ggacatatcg cgttcgtggt cgatataggc gttcagttcg tcaaattctt cgcggctgta
    16861 atcctcaagg atatgcctgt cgtattttcc ggcatcggtg atctttttaa catggttgta
    16921 aaggtgcggc ggctcgtatt cgccgtaggc tattttacga agatggaaaa tcgccaaacg
    16981 tgcggcaagg tattggtagt ccggggtatc ttccgaaatt aaatctgcag cggctttgat
    17041 gatggtttcg tggatgtcgt cggtgcggat gccgttgtag aactggatgt gcgatttcaa
    17101 ctcgacctgc gacacggaaa cattttccaa tccttccgcc gcccaagtaa cgacacggtg
    17161 aatcttatcc aaatcaatgg cttccaatct tccgtctcgt ttggttactt ttaaatcagt
    17221 cggtgtattc atcgcttcct cttccactct tgatattcaa gacacggtct tttcaaataa
    17281 attaaggcag acaatatagt ggatttttag cattttctcc agtcttgaca acgattgcat
    17341 ttttcagttt caggcaatgc gcgataaaac ccgcctgtcg tatttttcct ataacatttg
    17401 ttttatctga taatt
//
LOCUS       DAXGCP010000043        17391 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.043, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000043 DAXGCP010000000
VERSION     DAXGCP010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17391)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17391)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17391
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.043"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(168..992)
                     /locus_tag="ACFJCW_001225"
     CDS             complement(168..992)
                     /locus_tag="ACFJCW_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HFC4151369.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKAAGGVPENRAVENTPPA
                     TPAAGNAAASVEDTAALLKPGDILSEEQAEQLRLKKEAEQKKLREKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPVPFDGALSLGVGNSRENAQALQNRLADAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(1105..2883)
                     /locus_tag="ACFJCW_001226"
     CDS             complement(1105..2883)
                     /locus_tag="ACFJCW_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HFC4151370.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLAREADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRDLGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWAFDRPQYELGSLSPVAA
                     LACRRALGCLGLETQIKWPNDLVVGRDKLGGILIETVRAGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLAELGAVLEQYAEEGFAPFLNEYETANRD
                     HGKAVLLLRDGETVCEGTVKGVDGRGVLHLETAEGEQTVVSGEISLRPDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGESKKAQVKEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRPAGKRYPFPTTT
                     GNAVASGMMDAVCGSIMMMHGRLKEKNGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHA"
     gene            complement(2880..3386)
                     /gene="rfaE2"
                     /locus_tag="ACFJCW_001227"
     CDS             complement(2880..3386)
                     /gene="rfaE2"
                     /locus_tag="ACFJCW_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HFC4151371.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSAGAALVLALNTDASVRRLGKGGDRPVNPLENRAAVAAALESVDLVTWF
                     DEDTPAALIEAVKPEILVKGGDWAADEIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            complement(3522..3597)
                     /locus_tag="ACFJCW_001228"
     tRNA            complement(3522..3597)
                     /locus_tag="ACFJCW_001228"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3562..3564),aa:His,seq:gtg)
     gene            complement(3625..3701)
                     /locus_tag="ACFJCW_001229"
     tRNA            complement(3625..3701)
                     /locus_tag="ACFJCW_001229"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3665..3667),aa:Arg,seq:tct)
     gene            complement(3726..3803)
                     /locus_tag="ACFJCW_001230"
     tRNA            complement(3726..3803)
                     /locus_tag="ACFJCW_001230"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3766..3768),aa:Pro,seq:tgg)
     gene            4026..4880
                     /gene="folD"
                     /locus_tag="ACFJCW_001231"
     CDS             4026..4880
                     /gene="folD"
                     /locus_tag="ACFJCW_001231"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HFC4151372.1"
                     /translation="MSAQLINGKEVSQKHLQAIAEAVAQRQQDNLHTPCLAVVLVGGD
                     PAGAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAILERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAAADILVVGVGIPNFVKG
                     GWIKPGAVVIDVGINRLDDGSLCGDVEFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            complement(4942..5523)
                     /locus_tag="ACFJCW_001232"
     CDS             complement(4942..5523)
                     /locus_tag="ACFJCW_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HFC4151373.1"
                     /translation="MEEKNDYTDAVSDNRNGQEIEVGIAGAGDRILAALLNQLFTFLI
                     LLVPFVGLIAFAVKNEGRIGGREEIFGLLLGMTSFWVGLAGILAYTVIQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGENGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            5698..6813
                     /gene="asd"
                     /locus_tag="ACFJCW_001233"
     CDS             5698..6813
                     /gene="asd"
                     /locus_tag="ACFJCW_001233"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HFC4151374.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTSSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWIDAASSLR
                     MKDDAIIALDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAIHAQVADELADPSSAILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSGNPTVIDGLCVRIGAMRCHS
                     QAITLKLKKDLPVSEIEAILAGANDWVKVVPNEKEAGIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPMRRVLRIVLGSL"
     gene            complement(6906..7436)
                     /locus_tag="ACFJCW_001234"
     CDS             complement(6906..7436)
                     /locus_tag="ACFJCW_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HFC4151375.1"
                     /translation="MESFELEDLTLWLIRDADEAEMWIDRWAVSYPVVQMSEASANGS
                     TEAWQSALQTAFERIQGRHIAVVAHGAGAAAFLAWLYRADILTQKKLAGIILVSPRPD
                     IFPDDAEHTFQRVRCPCRAALVVSEHGGVPHGWAQKQADLWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(7446..7790)
                     /locus_tag="ACFJCW_001235"
     CDS             complement(7446..7790)
                     /locus_tag="ACFJCW_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151376.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFILPILVWAVFMLSRM
                     QGWLAPTKANPIWALVWLLICLPCLLIAAKCLGWKGWRRVVNIFVCLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            complement(7777..8556)
                     /locus_tag="ACFJCW_001236"
     CDS             complement(7777..8556)
                     /locus_tag="ACFJCW_001236"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC4151377.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LGVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(8727..10148)
                     /gene="cysS"
                     /locus_tag="ACFJCW_001237"
     CDS             complement(8727..10148)
                     /gene="cysS"
                     /locus_tag="ACFJCW_001237"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HFC4151378.1"
                     /translation="MTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELNARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHL
                     AGCLKALGGIIGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDSAGGTTWRRG"
     gene            complement(10164..11216)
                     /locus_tag="ACFJCW_001238"
     CDS             complement(10164..11216)
                     /locus_tag="ACFJCW_001238"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HaeII family restriction endonuclease"
                     /protein_id="HFC4151379.1"
                     /translation="MTLEEQQAKEALDGIIKKSRVHLYKPIQIAEILYHDRCIKQLDF
                     LNLDTYRNQSKRWRDEICRRFLGRISTSSAKFQDNLFEKNAIPPEKLAVLGTLNRQSD
                     GGVESYIYKQFFNRFSQMSEALAYVGNTDRYSFQLSEFLNLFWLEPGLKRSIDKIYEI
                     VVYALFDALVSELGITVSIDFPKENLFLWEEYQDFAEKIITMPKNEHLKLPAKIHRVG
                     VTNAADRGLDMWSNFGLAIQVKHLSLDEELAEDIVSSISADRIVIVCKKAEQSVIVSL
                     LTQIGWKSRIQNIVTEDDLISWYEKALRGQYPIAEALLENIKTEIMREFPAVNEANEF
                     LDFAQNRGYDITVTHF"
     gene            complement(11213..12160)
                     /locus_tag="ACFJCW_001239"
     CDS             complement(11213..12160)
                     /locus_tag="ACFJCW_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4151380.1"
                     /translation="MYKTIDLFSGIGGIRLGFEKYGCTNVFSSEWDKYARQVYEANFG
                     EKPFGDINGIDPSDIPDHDILLAGFPCQPFSIAGKGLGFEDTRGTLFFNIAEILKTKQ
                     PKAFLLENVKRLTTHDSGRTFRIVLETLKQLGYTVYFKVLNTLDFGLPQKRERIYIVG
                     FSDNIPFYFPEPINQYRPLGELLENDRDVEPSYFLSDTLKQKRLAALKKAPPTPSIWH
                     ENIGGNVSALPYSCALRAGGSYNYLVVNGVRRLTGREMLRLQGFPDDFEINIPYSQVR
                     KVAGNSVSVPVIEAIAENMLASLSGKVEQKGQLDLLEAG"
     gene            complement(12214..13368)
                     /gene="obgE"
                     /locus_tag="ACFJCW_001240"
     CDS             complement(12214..13368)
                     /gene="obgE"
                     /locus_tag="ACFJCW_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HFC4151381.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPVGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETVNPAEEALAIINELRKYDEELYG
                     KPRWLVLNKLDMLDEEEARARTAAFLEAVGWDYPEPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLAEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
     gene            13647..14177
                     /locus_tag="ACFJCW_001241"
     CDS             13647..14177
                     /locus_tag="ACFJCW_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HFC4151382.1"
                     /translation="MNTNQPAVYDPLTRALHWLTVAGFIGILTTIVLWTIYEEAEWAG
                     SLFGLHKSFGFLMLTVIALRIVWAVANRAKRPQSDSKAAAAGHGILYLLMLAVPVIGM
                     IRQYGGGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLFAAVVGHVAMVVVH
                     RVQGKDVLYRMTGRVR"
     gene            complement(14212..15087)
                     /gene="rsmI"
                     /locus_tag="ACFJCW_001242"
     CDS             complement(14212..15087)
                     /gene="rsmI"
                     /locus_tag="ACFJCW_001242"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HFC4151383.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGRLVSVREHNERQMADKVIGFLSDGLVVAQVSDAGTPAV
                     CDPGAKLARRVREAGFKVVPVVGASAVMAALSVAGVAESDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPVVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLVLYPAQDEKHEGLSESAQNAMKILAAELPTKQAAELAAKITGE
                     GKKALYDLALSWKNK"
     gene            15134..15481
                     /locus_tag="ACFJCW_001243"
     CDS             15134..15481
                     /locus_tag="ACFJCW_001243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HFC4151384.1"
                     /translation="MRLNHKQGTAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNQRFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GNRPPEWIKNITG"
     gene            15486..16079
                     /locus_tag="ACFJCW_001244"
     CDS             15486..16079
                     /locus_tag="ACFJCW_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HFC4151385.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAEKILVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFDHVF
                     SKQVRALGRAGDVLVGISTSGNSANVIEAVKAAHERDMHVIALTGRDGGKIAAMLKDT
                     DVLLNVPHPRTARIQENHILLIHAMCDCIDSVLLEGM"
     gene            16143..16751
                     /locus_tag="ACFJCW_001245"
     CDS             16143..16751
                     /locus_tag="ACFJCW_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HFC4151386.1"
                     /translation="MKPKPHTVRTLIAAVLSLALGGCFSAVVGGAAVGAKSVIDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIIT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            16759..>17391
                     /locus_tag="ACFJCW_001246"
     CDS             16759..>17391
                     /locus_tag="ACFJCW_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151387.1"
                     /translation="MPFEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRAVLLICI
                     TAIGALAVGIVSTFNPNGDKTLQTEPQHTDSPRETEFWLPNGAVGQDAAQPEHHHAAS
                     SEPAQPDGTEESGSGLPSPAAPKKNRVKPRPSDAARAADSLTGTGTQAENTLKETPVL
                     PTNAPHPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPAKPHKEI"
BASE COUNT         4003 a         5032 c         4437 g         3919 t
ORIGIN      
        1 cactcggaag ccgtccgttc cgaaccatta aacactgtat tccctcacaa ttcactttca
       61 cacttggagt cggcatatac gagacataca ttcccttttt aatcagatac tcaaaaccga
      121 aacgccaaac ccaccctagc ggtgggtttg gcgtttttgg tctgcactta tttgcaagac
      181 ttgaggttca gtttgccgta tagggacgtg attttacgga tttcgtccgc atcggcggca
      241 ttcacgcccg taaacaaaac cgtcatacgc gacacgctca aagaatcgtc ctgcctgtcg
      301 gcttcggcaa agtgttcgac aatatgcgcc ccgccgaatc cggcatcggc aagtcggttt
      361 tgcagggctt gggcgttttc ccggctgttg ccgacaccca aactcaatgc gccgtcaaac
      421 ggtacggggt tgaaaccttt ggcagacagc tccgccgcct gattttcggc atcggcggaa
      481 acgggcagga cgacgcggta ggttttgtcg gcaggtttgg ctttggcggt gcgtttttcg
      541 acgctcctgc tggcaacgtg cgaccatttg cccaaaagcc ctttgatgcg gtggtagtcg
      601 tcttcgtcca tcgtgaggct tgcctgcgcg gcgcataagg catccgccgc gccgttttca
      661 cgttccgcct gcgccttttc ggcggcgagt ttttcgcggc gggctttttc ttcacgctgt
      721 tttttctccc tcagtttttt ctgttccgct tcttttttca agcgcaactg ctccgcctgt
      781 tcttcgctca ggatgtcgcc cggtttgagc agtgccgccg tatcctccac ggatgccgcc
      841 gcattgccgg cggcgggcgt tgcggggggc gtgttttcga cggcccggtt ttccggcacg
      901 ccgcccgccg ctttaacggc caatttatag cccaccgtgc cgccgaatac ggcaatattg
      961 agtaccgcca aaagggtgaa gagccatttc attagaattt cctcaatgtt tgaaaccccg
     1021 cccgcccggg cggcagtctg tcgggcggca gaatccggac agattcggac ggatgccgcc
     1081 ccgtgttgaa aaaaggcata ttttttaagc gtgttccgat tccccgcctt cggcggcaat
     1141 caggttcagc agcccgtgga tgacgaggtt gtccgccacg cgcacggtat tttccgccaa
     1201 aaatgcaggc ggcagggctt cggcgacttt cgccgcgccg ccgccggtaa tgatgacatc
     1261 gacaggcttg cccgcgccgt ttttttcttt caaacggccg tgcatcatca ttatcgagcc
     1321 gcaaaccgcg tccatcatgc cgcttgcgac ggcgttgccc gttgtggtcg ggaaagggta
     1381 acgtttgccg gcggggcggt tgaggttggc ggttcggacg gcgagcgatt ctttcatcag
     1441 gtggaagccg ggcatgatgg ttccgccgag ataatgtccg tcatcggtga gcgcgtcaac
     1501 cgttaccgcc gtgccgcaac tgacgacgac gcaggcgttg cggctgaagc ggcggctgcc
     1561 caaggcgttg aaccaacggt cggaaccgtg ttcttcgggg tggcggtagt ggttgcgtat
     1621 gcccaaagcc tgtgcggaag acggcagcca ctcgattttt cgggcgagct gttccttcac
     1681 ttgtgccttt ttggattctc cgcacacggc gcaaccgacg atgcggacat ttccatccgc
     1741 cttttccgcc cactccgcgc ccaaaggcga caaatcgcgg tacggcgcgc tgccgacggt
     1801 tgcgaacgtg ccgttttcca cccacgccca cttgagccgg ctgttcccgc cgtccaacag
     1861 caaaaaacgt tccgaatccc gccgcttcgg cacggaaacc ggtctgtcgt cgggccgcag
     1921 gctgatttcg ccgctgacga ccgtctgttc gccctctgcc gtttccaagt gcagaacgcc
     1981 tcgtccgtcc acgcctttaa ccgtgccttc gcacacggtt tcgccgtcgc gcaacagcaa
     2041 taccgccttg ccgtggtcgc ggttggccgt ttcatactca tttaaaaatg gcgcgaaccc
     2101 ttcttccgca tattgttcca acaccgcgcc cagttccgca agcaatgttt ccagcaatac
     2161 ggcggcatcg gcattgcccc gccgcgatgc cgtctgaaac agcgactgca cggaagcggc
     2221 gttttccact tccttgggca gcacgaaatt gatgccgata ccgaccacgg caaccgtttt
     2281 accgcccgcc ctgactgttt caatcagaat gccgcccaat ttgtcgcgtc cgacgaccaa
     2341 atcgtttggc cacttgattt gcgtttccaa acccaaacac cccaaagcgc gccggcacgc
     2401 aagtgccgca acaggcgaca gcgaacccaa ctcatactgc ggccggtcaa acgcccagcc
     2461 gaaactgaac atcaggcact cgcccaaacg gtgcgaccac ttccgcccct gccgccccct
     2521 gcccttactt tgcaggtggg tcacgcatat ggttttgtgc gccttgtccg gcgcaatccg
     2581 cgccaattcc agtatctcgt cgttgctgga cgcgcactcg tgcttcaatg ccgtctgaaa
     2641 acccgacctt tcccccagat cgcgcaaacc ttcggcatcg aaaaccgcca aggggcgcac
     2701 cagccgccaa tagccgtcgt gttggcgcaa cagcccgcgt atatgcgccg gcatctgctg
     2761 ccaaaaaccg ttgagctgct gcggcttcat gtccgcctca cgcgccaatt gcgatacgtg
     2821 ttgcggcaaa ccgtcggcaa gctccgccaa cacccgccag tgcgaaggct tcaaaaccgt
     2881 cattttccgc cctctgccgc acggattttt gccaaagtct tcgttgtcga agtctggtgc
     2941 agaaacggaa ttgaaaacac ctgaccgccg cgtgccagcg tttccgccgc accgacaatc
     3001 tcatccgcag cccaatcgcc gcccttgacc aaaatctcag gtttgaccgc ctcaatcaac
     3061 gccgccggcg tatcctcgtc aaaccaagta accaaatcca cactttccaa cgcggcggca
     3121 acggcggcac ggttctccaa aggattaacc gggcggtcgc cgcccttgcc caaacgccgc
     3181 accgaagcat cggtattcaa cgccagcacc aacgccgccc ctgccgaacg cgcctgcgcc
     3241 agataagtaa cgtgccccct gtggaggatg tcgaaacagc cgttggtaaa caccagcggg
     3301 cgcggcaaca acgccaaacg cgccgccaac gcctcgggcg gacagatttt cgattcaaaa
     3361 tcagggacag accaagcgtc aaccatcaaa gcctccgaca aaaaccataa aagacagaaa
     3421 aacccacatg atacagaagc atatgcgaaa ggcaaagccg gcggcgcgga cagtacgcgc
     3481 aaacaggaaa agacccgtac cgaaaagtac gggcctttat ctggggtggc tgatggggct
     3541 cgaacccacg acaaccggaa tcacaatccg gggctctacc aactgagcta cagccaccat
     3601 aaaaacggtt ttcaatcaaa ttcttggcac gcccgacagg aatcgaacct gtaacccccg
     3661 acttagaagg tcggtgctct atccggttga gctacgggcg ctcatgccga ttcgtgctga
     3721 ttgattggtc ggggcggtgg gattcgaact cacgaccctc tgctcccaaa gcagatgcgc
     3781 taaccgggct gcgctacgcc ccgacttgaa gaagcggaat atacagttca gggaaagatg
     3841 cgtcaacatt tattttcaaa acaccaagat gaaaaatata gttttttgat ttgaaaaaat
     3901 atttaatccg tccaaacagc cgtattttat ttcggggcaa atttattttc ggcattctgc
     3961 tgtaaaaaca aacggaaaat gcgataattt tcagcatttt ctacctgttt aacaaaagga
     4021 cggatatgtc ggcacaactg atcaacggta aagaagtttc gcaaaaacac ctgcaggcga
     4081 ttgccgaagc ggtggcgcaa cgccaacagg acaatctgca cacgccttgc ctggccgtgg
     4141 ttttggtcgg aggcgaccct gccggcgcag tttatgtccg caacaagaaa accgcctgcc
     4201 aaaaatgcgg catcaagtcg ctgtcgtacg aactgcccga atcaacatcg caggaagaac
     4261 tgctggcatt ggtcgaccgt ctgaatgccg attccgaagt ggacggtatt ctggttcagc
     4321 ttccactgcc gaagcacctc gacagccaag cgatcttgga acgtatttcg ccggataagg
     4381 acgtggacgg cttccatcct tacaatgtcg gcaggctggc ggtcaaaatg ccgctgatgc
     4441 gcccgtgtac gcccaagggc gtgatgacgc ttttggaggc ttacggcatt gatccgaagg
     4501 ggaaaaaagc ggtcgtggtc ggcgcgtcga atattgtcgg ccgcccgcag gcgttggaat
     4561 tgctgctggc gcgcgcaacg gtaacggtct gccacagtgc gaccgaaaat cttgccgatg
     4621 aagttgccgc cgccgatatt ttggtggtcg gcgtgggcat tccgaacttt gtcaaaggcg
     4681 ggtggatcaa acccggcgcg gtcgttatcg atgtgggcat caaccgtttg gacgacggca
     4741 gcctgtgcgg cgacgtggaa tttgaaacgg caaaagaacg ggcggcgatg attacgcccg
     4801 ttcccggcgg cgtgggtccg atgacgattg ccacattaat ggaaaacact ttgcacgcag
     4861 cttcgctgca cgatgcttga gcggttctga agataaaaat gccgtctgaa agcctttcag
     4921 acggcatttt gccgcgtccg tttatttggg cagcttgacg acaaccgtat ccgccaatat
     4981 gtcgtaaagc gtgcggcggt cgcgtttgac cataaagagc aggacaaagt tggcaaggaa
     5041 tgccagcagg ttgatggcgt tttccccgtt ttcacctact gcaagaccga taacggcggc
     5101 aataatggca accaaaaccg accacgcgat ttcgcgtacc aaaaccgtgc cgacaaaacc
     5161 cggattgcgg ccgtcggttt tcaacacgcg gattctcatg attttcttac ccaatgactg
     5221 cccgtccctg ctcatatagt agatttggat gacggtgtac gccaaaatgc ccgccagtcc
     5281 gacccaaaag gaagtcatgc ccaaaagcag cccgaatatt tcctcacggc cgccaatcct
     5341 gccttcattt ttgacggcga aggcaatcag tccgacaaac ggcaccaaca aaatcaaaaa
     5401 ggtaaacaat tggttcagca gcgcggcaag tatccggtcg cctgcgccgg caattccgac
     5461 ttcaatttcc tgcccgttgc ggttgtcgga taccgcgtcg gtgtagtcgt ttttttcttc
     5521 catatccgtt cctgataatt gttcttaaac agatggaatt ctaccgccct actgctgcaa
     5581 acgccaatcc caaaaagaaa attcgataaa gaactttaca ttttcccaat acggcgttaa
     5641 aacgctttct ttacgccata cataatttta ttaacgattt tcctcaagga gcaatacatg
     5701 aaagtaggtt tcgtcggctg gcgcggtatg gtcggttcgg ttttgatgca gcgtatgaaa
     5761 gaagaaaacg acttcgccca cattcccgaa gcgtttttct ttacctcttc caacgtcggc
     5821 ggcgcggcac ctgatttcgg tcaggcggct aaaacattat tggacgcgaa cgacgttgcc
     5881 gagctggcga aaatggacat tatcgtcacc tgccaaggcg gcgattacac caaatccgtc
     5941 ttccaagccc tgcgcgacag cggctggaac ggctactgga ttgacgcggc gtcctcactg
     6001 cgcatgaaag acgacgcgat tatcgccctc gaccccgtca accgcaacgt catcgacaac
     6061 ggtctcaaaa acggcgtgaa aaactacatc ggcggcaact gtaccgtctc cctgatgctg
     6121 atggctttgg gcggcctgtt ccaaaacgat ttggtcgaat gggcgaccag catgacctac
     6181 caagccgctt ccggcgcggg cgcgaaaaat atgcgcgaac tcatcagcgg catgggcgcg
     6241 attcacgccc aagtggcgga cgagcttgcc gatccttcca gcgcgattct cgatatcgac
     6301 cgcaaagtgt ccgatttcct ccgcagcgaa gactatccga aagccaactt cggcgtaccg
     6361 ctcgccggca gcctgattcc gtggattgac gtggatttgg gcaacggcca gtccaaagaa
     6421 gaatggaagg gcggcgtgga aaccaacaaa atcctcggac gcagcggcaa tccgaccgtc
     6481 atcgacggcc tgtgcgtccg catcggcgcg atgcgctgcc acagccaagc catcactctg
     6541 aagttgaaaa aagacctgcc tgtttccgaa atcgaagcga ttttggcagg cgcgaacgac
     6601 tgggtgaaag tcgtccccaa cgaaaaagaa gccggcatcc gcgagctgac gcccgccaaa
     6661 gttaccggca cgctgtccgt ccctgtcgga cgcatccgca aactgggcat gggcggcgaa
     6721 tacatcagcg cgttcaccgt cggcgaccaa cttttgtggg gtgcagccga accgatgcgc
     6781 cgcgtgttgc gtatcgtgtt gggcagcctg taagccctgt ttgaatggaa atgccgtctg
     6841 aagcctgttt cagacggtat tttccttgca accccggtta accgaaattc cgataaagcg
     6901 accgttcacg ccagcaacat ttcctgcatc agcttcatac cccactgcca gccgccgagc
     6961 ataccgttca aactgcccga atgcggggaa accaacaggc gggcgttcca caaatccgcc
     7021 tgtttttgcg cccaaccgtg cggcacgccg ccgtgttcgg acaccaccaa tgcggcacgg
     7081 caaggacagc ggacgcgttg gaaagtgtgt tccgcatcgt cgggaaaaat atcgggacgc
     7141 ggagatacga gaatgatacc ggcgagtttc ttctgcgtca ggatgtcggc gcggtacagc
     7201 cacgccaaga atgcggccgc gcccgcgccg tgtgcgacaa cggcgatatg cctgccctgt
     7261 atccgttcga atgccgtctg aagcgcgctt tgccacgctt ccgtgctgcc gtttgcggac
     7321 gcttcggaca tctgcacaac gggataactg accgcccaac ggtctatcca catttccgct
     7381 tcatccgcat cgcgtatcag ccacagcgtc aaatcctcaa gctcgaaact ttccattgtc
     7441 cgcgactatt tgagcaggtc ccggagggta aaggcgatga gcagcgaagc gggtacgctc
     7501 aatatggcgc agacggtcag gcagacaaaa atattcacca cccgccgcca gcctttccaa
     7561 cccaaacatt tggccgcaat cagcaggcag ggcagacaaa tcagcagcca caccaacgcc
     7621 catatcgggt ttgccttggt cggcgcaagc cagccttgca tccgcgacaa cataaacacc
     7681 gcccacacca atatgggcag gataaacgca gcgacaaccc atgccgcgcc tattcctgtt
     7741 tttccgtcca cattccaatc atatttaccc aaaaccttat tcggcagcat agtcatactc
     7801 cacaactaaa ggggcgtgat ccgagaattt ttcatcttta taaacgtgtg cggacacggc
     7861 tttggcggca agttcgggcg taaccatctg ataatcgatg cgccacccga catctttcgc
     7921 atacgcctgc ccgcggttgc tccaccatgt ataacccggc acatcgggat agagcgtgcg
     7981 ccacatgtcc gtccagccca gcgtatggat gactttgcct atccactcgc gctcttcggg
     8041 caggaagccc gaatttttct gattgccttt ccaatttttc aggtcgatgt tttggtgggc
     8101 gatgttccag tcgccgcaga cgacgatgtc gcgcccttcg tttttcatcg cttcgagcat
     8161 agggtaaaac gcatcgagga aacggtattt cacctgctgg cgttcttccg cgctgctgcc
     8221 gctgggcaaa taaagcgaaa tgacgcccaa cctgccgaaa tcgcaacgca caaaccgccc
     8281 ttcgcggtcg aattcctcaa tgcccatgcc gatttgcaca ttgtcgggtt tgcgtttgct
     8341 gtacaccgcc acaccgctgt aaccgcgctt ctcggcgcaa tgccaatggc cgtgcatccc
     8401 gtgcggattt ttcatatcgg cagacaaatc agcctcctgc gctttgagtt cctgcacgca
     8461 gacaatgtct gcgcccgatg cggcgatgta ttcgtaaaaa ccttttttgt aggcggagcg
     8521 gatgccgttg acgttggcgg aaatgatttt aagcataata aaaataagtt ctcacaatgt
     8581 tcccatacac aaagcggcac ccggtgcgcc gcccggtatt tcccattcgg tcctgcctgc
     8641 tgaaaacggc ggggcttcaa gcgggaaatg ccgtctgaaa acgaaaaaag ggcaaaaggc
     8701 ggtacttttg ccctttccga tacagttcaa ccgcgccgcc aagtcgtgcc gccggcgctg
     8761 tcttccaaaa tgattttgtg ttcgttcaga aggtcgcgga tgcggtcgga ctccgcccag
     8821 tttttatccg cgcgagcctg tttgcgtcgg gcaatcaagt cttcgatttc ttcgttggag
     8881 aggccgtctg aaactgcgcc gccttggagg aactcaatcg ggttgcgttg cagcaggccg
     8941 atgatgccgc ccaaagcttt caggcagccg gcgaggtgtg cgtcattggt tttgttcact
     9001 tcgcctgcca gctcaaacaa cacggcaacc gcttcgaccg taccgaaatc gtcgttcatg
     9061 gcggcgtaga aacggcgggt gtagccgttg gcgttttcag acaaatcaaa ctcagccgcc
     9121 ggtgtgtttt tcaaggtggt gtacagacgg gtcaacgcgc ctttcgcgtc gtccaaatgc
     9181 gcgtcggagt agttcaacgg gctgcggtag tgggcgcgca ggatgaagaa acgcacgact
     9241 tcggggtcgt attgtttcaa tacttcgcgg atagtaaaga agttgcccag cgatttggac
     9301 attttttcgc cgtccacacg gatgaagccg ttgtgcagcc agtatttgac gtggctggca
     9361 atacttcgac cgtggtgggt ttgcgcgtgg tcatgaccgc aggtgtgacc gctggcaccg
     9421 acgctttggg cgatttcatt ttcatggtgc gggaactgca aatccgcgcc gccgccgtga
     9481 atgtcgaacg tatcgccgaa caggttttca ctcatcgcgg aacattcgat gtgccaaccc
     9541 ggacggccgt tgccccacgg gctttcccac gccggttcgc ctgctttcgc cgctttccac
     9601 aatacaaaat caagcggatc gcgtttgaaa ccgtccactt ccacgcgttc gcccgcacgc
     9661 aggtcgtcca acgatttgcc cgataattgt ccgtaagcgg caaactcgcg cacggcgtag
     9721 taaacgtcgc cgtttgcggc aggatatgcc ttgccgtttt gaatcagggt ctcaatcatg
     9781 gcaatcattt gcgggatgtt ttccgtcgcc ttcggctcga tgtcgggacg caacacgccc
     9841 aaagcatcgg catcttcgtg catcgcctga atgaaacgcg cgttcagttc gccgatggtt
     9901 tcgccgtttt cagccgcacg ggcgatgatt ttgtcgtcga tgtcggtgat gttgcgcaca
     9961 taagtgagcg gataaccgca ctcgcgcaac cagcgggcaa tcatgtcgaa caccaccatc
    10021 acacgggcat ggcctaagtg gcaatagtcg taaacggtca tgccgcagac gtacatacgc
    10081 acgttttcag ggtcgatggg ggcgaagggt tctttttgac gggtaagggt gttgtagatg
    10141 gcggtcatat tcatcaagta agtttagaaa tgagtaacag taatgtcata tccgcgattt
    10201 tgggcgaaat ctaaaaattc attggcttca ttaacggcag gaaattcacg cataatttca
    10261 gttttaatat tttccaacaa cgcttctgca atcggatatt ggcctctcaa tgctttttcg
    10321 taccaactta tcaaatcatc ctcagttacg atgttttgaa ttcggctttt ccagcctatt
    10381 tgcgtcagta atgaaacaat caccgattgt tctgcctttt tgcagacaat gacaattcta
    10441 tctgcgctaa tggaggatac aatatcttct gccaactctt cgtctaaaga gagatgtttg
    10501 acctgtatgg ccaatccgaa gttagaccac atatccaacc ctctatcggc agcattggtt
    10561 acgcctacac gatggatttt tgcaggaagt tttaaatgct catttttcgg catagtgatg
    10621 attttttcgg caaaatcttg atattcctcc cataaaaaca ggttttcctt aggaaaatca
    10681 attgaaaccg ttatgcctaa ttctgaaacc aatgcatcaa acaacgcata aacaacgatt
    10741 tcatatatct tgtctatact tcttttcaat cccggctcga gccaaaataa atttagaaat
    10801 tcagacagtt ggaaggagta tctgtctgta ttgccgacat aagccaatgc ttcgctcatt
    10861 tgggaaaaac gattgaaaaa ctgtttataa atgtacgatt ctaccccgcc gtccgactgt
    10921 ctgtttaatg ttcccaatac cgctagtttt tcaggcggta ttgcattttt ttcaaacaga
    10981 ttatcttgga attttgcaga tgaagtagaa atccgcccta aaaaccgacg gcagatttca
    11041 tccctccagc gtttagattg gttgcggtaa gtatctaaat ttaaaaaatc caactgtttt
    11101 atacaacggt catgatataa aatttctgca atttgaatgg gtttataaag gtggacacgg
    11161 gattttttga taatgccgtc caatgcttct ttggcttgtt gttcttcaag cgtcatcctg
    11221 cctccaataa atccaattgc cctttttgtt cgaccttgcc ggaaagagaa gcgagcatat
    11281 tttccgcgat ggcttctatt acagggacgg atacagaatt tccggcgact ttcctgactt
    11341 gcgagtaggg gatattgatt tcaaaatcat cgggaaaacc ttgtaatctt aacatttccc
    11401 ttcctgttag ccttcttact ccgtttacca ccaaataatt gtaacttccc ccggccctta
    11461 aggcacagga atatggaagt gcggaaacat tcccgccaat attttcatgc caaattgatg
    11521 gggtgggcgg agcttttttt aaggctgcca aacgtttttg tttcaaggta tctgataaaa
    11581 aatagcttgg ttcgacatct cgatcgtttt ccagcagttc gcccaatggc cgatattggt
    11641 ttatgggttc gggaaagtaa aaagggatgt tgtctgaaaa acccacaata taaattctct
    11701 cgcgtttttg cggcaatccg aaatccaaag tatttaaaac cttaaaataa accgtataac
    11761 caagctgttt aagggtttct aaaacaatac ggaaagtcct gcccgaatcg tgcgtagtca
    11821 gccgcttaac gttttccaga agaaaagcct tcggctgttt ggttttcagg atttcggcaa
    11881 tattgaaaaa caatgttccg cgcgtatctt caaatcccaa tcccttacct gcgatactga
    11941 aaggttggca cggaaatccc gcaagcagaa tatcatgatc gggaatatct gaaggatcga
    12001 tgccgttaat gtcgccaaaa ggtttttctc caaagtttgc ttcatacact tgtcgggcat
    12061 atttgtccca ttccgatgag aatacattgg tgcacccgta tttttcaaag cctaggcgta
    12121 ttccgccaat gcctgaaaat aaatctattg ttttgtacat agcacatctc tgcagaatga
    12181 gccgcctgaa aactttcaga cggccttgtc cttttactcc ggcttaaaca cgccagtatc
    12241 cgttttaggc tgctgttcga taatttcaac atttgccgct gctttctccg cttcggcttt
    12301 ttcagcctcg atacgttttt tctcggccag gtattggttg atttggtgta ccaactcctg
    12361 cgtgccttga tgtgtcagcg cgctgatttg gaagaggcgc ggggtttcca tgtcgaattg
    12421 gaaacggtca tcaggttcgg ggtagtccca gccgacggct tcgaggaagg cggctgttcg
    12481 cgcccgggct tcttcttcgt cgagcatatc gagtttgttc agcaccagcc agcgcggttt
    12541 gccgtaaagt tcttcgtcgt atttgcgtaa ttcgttgatg atggcgagtg cttcttcggc
    12601 gggattgacg gtttcgtcga agggtgccaa atcgacaacg tgtaacagca gaccggtgcg
    12661 tgataggtgt ttgaggaagc ggtggccgag gcctgcgcct tctgccgcgc cttcaatcag
    12721 accggggatg tcggccatca cgaagctgtg gttttcgtcg atgcgtacca cgcccaagtt
    12781 cggatgcagg gtggtgaagg ggtagttggc gattttgggg cgtgcggcgg agacggcggt
    12841 aatcagggtg gatttgccgg cgttgggcat gcctaacaag ccgacatcgg cgaggacttt
    12901 gagttcgagt tgcagggaac gggtttcgcc ttcttcgccg ggcgtggatt gttttggggc
    12961 gcggttgacg gaggatttga agtggatgtt gcccaagccg cctttgccgc ctttggcgag
    13021 gcagacgcgc tgtccgtggt aggtgaggtc ggcaacgatt tcgtcggtgt cgaggtcgcg
    13081 gataagggtg ccgacgggca ttttgaggac aatgtcgtcc gcacctgcgc cgtagcggtc
    13141 ggaaccgtgg cctttttcgc cgtttttggc ttggtagcgt ttgacgaagc ggtattcgac
    13201 gagggtgttg gtgttttcgt cggcttctgc ccagacgctg ccgcctttgc cgccgtcgcc
    13261 accgtccggg ccgccgcggg gtacgaattt ttcgcggcgg aaactggttg cgccattacc
    13321 gcctttgcct gcggcgactt cgatttttgc ttcgtcgatg aatttcatta aatgctcttg
    13381 tttgttggtt ttaaataggg tttcaggcgg attgccatat gttttgatgc cgtctgaaca
    13441 gattttctgc cgacattata aggtataagc ggtatttcaa tataccgcgg agaaactatt
    13501 tgttctgccc atcttaatga atttttaagc aaatcttcag cctgcaaaca aaatatgtcc
    13561 aacttctttg gtacaatcgc gcctttttga cattccgacc cgacggaatg tccgttcaaa
    13621 ccgttacata tgataaggat ttttttatga acacaaacca acctgccgtt tacgacccgt
    13681 tgacacgcgc gctgcactgg ctgaccgttg ccggcttcat cggcattctg accaccattg
    13741 tcctgtggac aatttacgaa gaggcggaat gggcgggcag cctgttcggc ctgcacaaat
    13801 ctttcggttt cctcatgctg acggtgattg cattgcgcat cgtgtgggcg gttgccaacc
    13861 gcgccaagcg tccgcaaagc gacagcaagg cggcagcggc aggacacggc attctgtatc
    13921 tgctcatgct tgccgttccc gttatcggca tgatccgcca atacggtggc ggacgcggcc
    13981 cgttgaaagt gttcggcgtt gaagtaatgc agggttcgcc ggaaaaaatc gagtggatgg
    14041 caaacttggg caacacgttc cacggcaatt tgggctggct gctgtttgcc gccgtcgtcg
    14101 gacacgtcgc catggtcgtc gtccaccgtg ttcaaggcaa agacgtgctg taccgcatga
    14161 cggggcgtgt ccgttgattc cgttcgcact atggtgccgg tccatccggc atcatttgtt
    14221 tttccacgac agtgccaaat cgtacaaagc ctttttgccc tcacctgtaa tcttggcggc
    14281 aagctccgcc gcctgcttgg tcggcagctc ggccgcaagg attttcatcg cattttgcgc
    14341 agactcggac aagccttcgt gtttttcatc ctgcgccgga taaagcacca acaccatctc
    14401 gccgcgcgat tggttgccgt ccgccgccaa tgccgtctga atttccccaa ccgtgccgct
    14461 taagaacgtt tcaaacgttt tcgtgatttc gcgcgccagc atcagacggc gttcggggaa
    14521 caattccgcc atatcggcaa gcgttgcccc gattcggtgc ggcgtttcaa acatgacgac
    14581 aggaaatgcc gcccgcaccc atttggcaaa caatttccta cgttcgcccg atttcggcgg
    14641 tacaaaaccg ttgaaataaa aatcggattc cgccacaccg gccacactca acgccgccat
    14701 taccgcgctt gcgcccacga cgggaacgac tttgaaccct gcttcgcgca cgcggcgggc
    14761 gagtttcgcg cccgggtcgc acacggccgg cgtacccgca tcggaaacct gcgccacaac
    14821 caggccgtct gaaaggaaac cgattacctt gtccgccatc tgccgctcgt tgtgttcgcg
    14881 cacactgacc aacctgccct gaatgccgta cgcgctcaaa agctgcgcag taacgcgcgt
    14941 gtcttcggca caaatgatgt ccgccttttg caataccgcc aaagcgcgca gggtaatgtc
    15001 tgccaaattg ccgatgggcg tggcaaccac gtataatgtc cctccgacga cgctgtcgga
    15061 ggctttctgc aagtgtttct gaaacataaa aaatgccgtc tgaaaaacag acattataaa
    15121 ggttaaaccg attatgcgct taaaccacaa acagggtacg gcaggggaag atgccgcact
    15181 tgccttcctc caatcccaag gctgcacgct gcttgcccgc aactggcact gcgcctacgg
    15241 cgaaatcgac ctgattgtca aaaacggcgg catgattctg tttgttgaag taaaataccg
    15301 caaaaaccaa cggttcggcg gcgcggcata cagcatttct ccgtccaaat tattgaaact
    15361 gcaacgaagt gtagagtatt atctgcaaca gaacaggctg acaaacgtac cgtgccgcct
    15421 cgatgcggta cttatcgaag gaaaccgccc gcccgagtgg ataaagaata ttacaggttg
    15481 acgatatgac gacattacaa gaacgcgttg ccgcacattt tgccgaaagc atccgtgcca
    15541 aacaggaagc cgaaaaaata ctggtcgagc cgaccgtaca ggctgccgag ctgatgctgc
    15601 aatgcctgat gaacgacggc aaaatcctgg cctgcggcaa cggcggttcg gctgccgacg
    15661 cgcaacactt cgccgccgaa atgaccgggc gttttgagaa agaacgcatg gaactcgccg
    15721 ccgtcgccct gaccacagac acctccgcgc tgaccgccat cggcaacgac tacggtttcg
    15781 accacgtatt cagcaaacaa gtgcgcgcgc tcggacgtgc aggcgacgtc ctcgtcggca
    15841 tttccacctc cggcaattcc gccaacgtca tcgaagccgt caaagccgca cacgaacgcg
    15901 atatgcacgt catcgccctg accggccgcg acggcggcaa aatcgccgcc atgctcaaag
    15961 acaccgacgt tctgctcaac gtcccccatc cgcgcaccgc ccgcattcag gaaaaccaca
    16021 tcctgctgat acacgccatg tgcgactgta tcgactccgt actgctggaa ggaatgtaac
    16081 ccttttcaga cggcatggcg caaagcaatg ccgtctgaaa cgcccaagaa aggaagtccc
    16141 cgatgaaacc caaaccacac accgtccgca ccctgattgc cgccgtcctc agccttgccc
    16201 tcggcggctg cttcagcgca gtcgtcggcg gggccgccgt cggcgcgaaa tccgtcatcg
    16261 accgccgaac caccggcgcg caaaccgatg acaacgttat ggcgttgcgt atcgaaacca
    16321 ccgcccgttc ctacctgcgc caaaacaacc aaaccaaagg ctacacgccc caaatctccg
    16381 tcgtcggcta caaccgccac ctgctgctgc tcggacaagt cgccaccgaa ggcgaaaaac
    16441 agttcgtcgg tcagattgca cgttccgaac aggccgccga aggcgtatac aactacatta
    16501 ccgtcgcctc cctgccgcgc actgcgggcg acatcgccgg cgacacttgg aacacgtcca
    16561 aagtccgcgc cacgctgctg ggcatcagcc ccgctacaca ggcgcgcgtc aaaatcatta
    16621 cctacggcaa tgtaacctac gttatgggca tcctcacccc cgaagaacag gcgcagatta
    16681 cccaaaaagt cagcaccacc gtcggcgtac aaaaagtcat taccctctac caaaactacg
    16741 tccaacgctg actcggcaat gccgtttgaa ccgccttcag acggcattgc ccgacacccc
    16801 aaaagcacaa tcaaaatggc aaaaaaaccg aacaaaccct tcaggctgac ccccaaactc
    16861 ctgatacgcg ccgtattgct catctgtatc accgccatcg gcgcattggc agtaggcatc
    16921 gtcagcacat tcaacccgaa cggcgacaaa accctccaaa ccgaaccgca acacaccgac
    16981 agcccccgcg aaaccgaatt ctggctgcca aacggcgccg tcggacaaga tgccgcccaa
    17041 cccgaacacc accacgccgc ctcatccgaa cccgcacagc cggacggcac agaagaaagc
    17101 ggcagcggac tgccgtcccc tgccgcaccc aagaaaaacc gggtcaaacc gcgcccttcg
    17161 gatgcggccc gggcagccga ttcgttaacc ggcaccggaa cacaagctga aaacacactc
    17221 aaagaaaccc ccgtactgcc cacaaacgcc ccccatcccg aaccccgaaa agaaacaccc
    17281 gaaaaacagg cgcagcccaa agaaacaccc aaagaaaaag aaacgcccaa agaaaaccat
    17341 accaaaccgg acaccccgaa aaacacgccg gccaaacccc ataaagagat t
//
LOCUS       DAXGCP010000044        17376 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.044, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000044 DAXGCP010000000
VERSION     DAXGCP010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17376
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.044"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(197..754)
                     /locus_tag="ACFJCW_001247"
     CDS             complement(197..754)
                     /locus_tag="ACFJCW_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HFC4151388.1"
                     /translation="MDALKLLTNRRSSKKLKHPAPDAAELEQILQAATQVSDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCEDKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(829..2463)
                     /locus_tag="ACFJCW_001248"
     CDS             complement(829..2463)
                     /locus_tag="ACFJCW_001248"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HFC4151389.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELRPFNDT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEALNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEIDKCARATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESAVYYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(2526..2864)
                     /locus_tag="ACFJCW_001249"
     CDS             complement(2526..2864)
                     /locus_tag="ACFJCW_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151390.1"
                     /translation="MIFKCRPNAFQTASAVSAFSGGVLEVVRLCCRRLSVLFNPGVML
                     FVPDCPVGGAAGFFQYEMLCPLFRQGRLQTGSNFAYDVFMSAGRLNGGRKPPRRLLVF
                     LPCFAPLPYN"
     gene            complement(2861..3967)
                     /gene="serC"
                     /locus_tag="ACFJCW_001250"
     CDS             complement(2861..3967)
                     /gene="serC"
                     /locus_tag="ACFJCW_001250"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HFC4151391.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLRTAQQEMSDYNGTGFSVMEMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSDGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNRDGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINDIHPDARSKMNVVFKTASEDLDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            4333..4764
                     /gene="rimP"
                     /locus_tag="ACFJCW_001251"
     CDS             4333..4764
                     /gene="rimP"
                     /locus_tag="ACFJCW_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HFC4151392.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELAAQGTLRVFIDKEGGITVEDC
                     ATVSNHLSRVFMVEDIGYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIGGQK
                     NFIGKIEGCENDTVTVSFDGKTVQIELGNIDKARLRPEFKF"
     gene            4792..6294
                     /gene="nusA"
                     /locus_tag="ACFJCW_001252"
     CDS             4792..6294
                     /gene="nusA"
                     /locus_tag="ACFJCW_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HFC4151393.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPDTTIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQIILSRTSGDFLVKLYA
                     NEVPEIAGGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVAEDRLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMNHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGVDADM
                     LLSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            6306..9137
                     /gene="infB"
                     /locus_tag="ACFJCW_001253"
     CDS             6306..9137
                     /gene="infB"
                     /locus_tag="ACFJCW_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HFC4151394.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVQPEQTAEDAVKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEPKEKAVKPKHERNGKGKDAKKPAKPAAPAVPQPVVSAEEQAQ
                     RDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQAKAAQEAKTGRQRPAKPTE
                     KPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGKGAKGGRDRNNARNGGDERV
                     RGGKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVADLAHKMAVKGVEVVKALMKM
                     GMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLGEGAEAVEAEALPRPPVVTV
                     MGHVDHGKTSLLDYIRRAKVVQGEAGGITQHIGAYHVKTPRGVITFLDTPGHEAFTAM
                     RARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPIVVAVNKIDKDTANPERIRQ
                     ELTQHEVIPDDWGGTVQFIDVSAKKGTNIDALLEAVLLEAEVLELTAPVDAPAKGIIV
                     EARLDKGRGAVATLLVQNGTLKKGDMLLAGTAFGKIRAMVDENGKSITEAGPSIPVEI
                     LGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLAKQQAAKLENMFNNMGETQA
                     QSLSVIIKADVQGSYEALAGSLKKLSADEVKVNVLHSGVGGITESDVNLAIASGAFII
                     GFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMSGMLSPEKKEQVTGTVEIRQ
                     VISVSKVGNIAGCMVTDGVVKRDSHIRLIRNNVVIHTGELASLKRYKDDVKEVRMGFE
                     CGLMLKGYNEIMEGDQLECFDIVEVARTL"
     gene            complement(9297..10637)
                     /locus_tag="ACFJCW_001254"
     CDS             complement(9297..10637)
                     /locus_tag="ACFJCW_001254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase/DUF3482 domain-containing protein"
                     /protein_id="HFC4151395.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADMLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELTILSWCAKPVMPVFNFTGGQLPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLAGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDAAKLPPELNKARSHWKWSSLNTHRPETSRAERREYAEKIGIRLAGK"
     gene            complement(10711..12051)
                     /locus_tag="ACFJCW_001255"
     CDS             complement(10711..12051)
                     /locus_tag="ACFJCW_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HFC4151396.1"
                     /translation="MLNPSRKLVELVRILDEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRSEMIDRDRMLRDTLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLVL
                     AGVLGMNTLMLAVWLATLFLRVKVGRFFSSPATWFRGKGPVNQAVLRLYADQWRQPSV
                     RWKIGATAHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLSNAASVRAVEMLAWLPS
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIVCYGILPRLLAWVVCKILLKTSE
                     NGLDLEKTYYQAVIRRWQNKITDADTRRETVSAVSPKIVLNDAPKWALMLETEWQDGQ
                     WFEGRLAQEWLDKGVAANREQVAALETELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALTECGAAWLEPDRVAQEGRLKDQ"
     gene            12194..12820
                     /locus_tag="ACFJCW_001256"
     CDS             12194..12820
                     /locus_tag="ACFJCW_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HFC4151397.1"
                     /translation="MYAGERFNTYSHLSGLILAAAGLMLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIAIYIVMGWMVLAVMKSLTASLPPAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(12885..14303)
                     /locus_tag="ACFJCW_001257"
     CDS             complement(12885..14303)
                     /locus_tag="ACFJCW_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HFC4151398.1"
                     /translation="MENILSVLVGTVNRFLWGYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDGKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWLSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIVALGFIGNATQANSIASAVTIAFDVPSLAVGIVFAVLAGMVVIGGVNRIANIA
                     RFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMTAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFAFTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYQYEFHEFHDKQ"
     gene            14630..15358
                     /locus_tag="ACFJCW_001258"
     CDS             14630..15358
                     /locus_tag="ACFJCW_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HFC4151399.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIGLRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(15417..15905)
                     /locus_tag="ACFJCW_001259"
     CDS             complement(15417..15905)
                     /locus_tag="ACFJCW_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HFC4151400.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCAAVVLACKPKGRVGGLSGAVFISIPAVTGISVAAYQLWLQSLPPGAAPSCG
                     APWTFRLKGWPLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(16357..16620)
                     /locus_tag="ACFJCW_001260"
     CDS             complement(16357..16620)
                     /locus_tag="ACFJCW_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151401.1"
                     /translation="MCQVYKGEVEEKNQAASSNSTAVIIRRFLSAVNYFLKIYPTDSN
                     FAKNLPDGYPVTNSLKNPSIRLFKKSYAFIVFPFRLKPCPLGR"
     gene            complement(16927..>17376)
                     /locus_tag="ACFJCW_001261"
     CDS             complement(16927..>17376)
                     /locus_tag="ACFJCW_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HFC4151402.1"
                     /translation="KIDFRILKILQQNARIPMTELAEKVGLSSTPVTERVCRLEREHY
                     ISGYHAHLNPHLLGKPPLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVSGEYDY
                     LIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
BASE COUNT         4553 a         4887 c         4377 g         3559 t
ORIGIN      
        1 ccgataccga tgccgtctga accttcagac ggcatgaggt ctttgcctgc gcacttggtg
       61 cgctggtcgc ctccgaacat ggcgcaacac ccgacatttc cgccgaacgc atcgggcgtt
      121 tcataaaccc ggtttaaaac gcatggaaaa atgccgtctg aaagcctttc agacggcatt
      181 ttgtttgaga ttccgtttac caatggctga caaacgcttc caaatcggta ttcttgggct
      241 tatgcacttc ctctgtcggc gtgccgacca tcatcagccc gatgatttta tccttatcct
      301 cgcaaccgaa agcctcccgc aacaatgggc tgttgaccca catccccgta atccagacat
      361 tgtcgaatcc ctgagccgtt gccgccagtt gcagcgcata cgccgcacaa cccgccgtca
      421 gcatctgctc ccattccggt ttcggcttag gcacatcgcg gttcggcgca aacgttaccc
      481 cgatgaccat cggcgccata ttgcccactt tttccgcctt tttcatcgca tcgtcgccga
      541 aattcagttc ggcaaccgtt tgcttcaaca catcgcgaaa acgttgcaat cctacctcgc
      601 cttgaatcac ggtaaaacgg aaggggcgca tgttgccgtg atcggaaact tgggttgccg
      661 cctgcaatat ttgttccaac tccgccgcat cgggggcggg gtgcttcagc tttttggaag
      721 atcggcggtt cgtcaataat tttaaagcat ccatatcgtt atactccggt catcggtcgg
      781 gtgtttcgga cacatatgcc gtgaaggctt cagacggcat atccggcatc agcgcggacg
      841 gcggcaggct gccaatatat ccatttcctt ccgataggtt tggctgttgg aaatgtccat
      901 cagccccaat accgtgctga aatagtggtc gtgcgaatat tcgttttccg ccgctttttg
      961 tttgaggcat tggaaatcta tgcccccgtg ttggcggaag gctttggaaa accacataac
     1021 catcgggata tgcgtctgtc cggaaggcgc gatggcgtaa ggcgcggcgt gcaggtacat
     1081 cccgttttcg cccaaacttt cgccgtggtc ggaaacataa tacaccgcgc tttccaaatc
     1141 gtcgcggttt tcaagtttgc ggataacctt gtcgataaac tgatccacat acaaaaccgt
     1201 attgtcgtaa gtgttgacca acgtggcgcg ggcgcatttg tcgatttcgt tggtatcgca
     1261 tgtcggcgtg aatttgcgct cggcttcggt atagcgttcg taatacgtcg gcccgtggct
     1321 gccgatggta tgcaggatta aaaccgcgtc tttatcgttt ttgttgaggg cttcgtcgaa
     1381 cttggtcaac aggatattgt cgaggcactc gccgttgcgg cagtattcgg gcaggttgag
     1441 cgaggtaacg tcggtattcg gcactttgcc gcacacgccc ttgcagccgg aatcgttttc
     1501 caaccaagta acttccacgc cggcgcgctg tacgatgtcc agcaggttgt cttggtgttc
     1561 ggctttgatt tcgtcataat ccgtgcggtc gaaggttgag aacatacacg gcagggagtg
     1621 cgcggtcgat gtgccgcagc ttctgacctg cgggaaattg acaatttcat cgccgcgcgc
     1681 ggcaagcagc ggcgtagttt ggcggctgta accgttcaaa ccccagttgg cggcacgcgt
     1741 agtctcgccc acgaccagca ccacgaaacg gcgcaggctg ccggccggcc ggttttgcac
     1801 gaccgccata tccaattgcg tataaggaat attggaacgc ttccaatctt tgtatttcga
     1861 cacgcccgcg ccgatgaaat tagacggcac aatcagatgg gttactgatt tattgttgcg
     1921 gaaaaacgag gcgtaatcct gatattgcaa catcgcgatg cccaacgcgc acaaaaagga
     1981 aacggcggca agcacaaggc gcgtcaaaag ctccttatac caaacgcggt atttgacctt
     2041 gacggcgata tatgccagcg cgggcaatac gcccaaacat acaatccaca gcacatagcc
     2101 cggcgtaatc aggcgcgcgc tttccgccgc cgtggtttgc aagacattat tcaacatcga
     2161 cttgttgaaa tagatattga aaaatatttc ttggtaagac accgccgcac tgataaccaa
     2221 tatcaatgga atcaatactt tatgcacaaa aggcagggca atgacgtgaa aaacgaaatt
     2281 acttaaaaaa aacagcacca ccggcatcgt atagaggaag atgtccgccc cggtgtcgtt
     2341 aaaagggcga agttcgacaa ctttggcaaa aaaggcgtaa ttcaatacca gcgaagaata
     2401 cagggaaaga aaggcaatca gcgcggaaga gccgagcttc ggcctcaggt tcggttttat
     2461 catttggaat gtgtcggata agggttggaa aaggcatccg gaatccggat tattgaaaaa
     2521 gattcttaat tataaggcaa cggagcaaag cagggcaaga aaacgagtag gcggcgcggg
     2581 ggtttccgcc cgccattcaa acgtccggca gacataaaaa catcgtaagc aaaattcgaa
     2641 ccggtctgca accgcccctg ccggaaaagc gggcaaagca tttcatattg gaaaaacccg
     2701 gccgcgccgc cgacgggaca gtccggcaca aacagcatca cgcccggatt gaaaaggacg
     2761 gatagccgcc ggcagcacaa tcttaccacc tccaaaacgc cgccggagaa cgccgaaaca
     2821 gccgatgccg tctgaaacgc attcgggcgg catttgaaaa tcaaccgtaa cgccgttgga
     2881 aatcgcgcat aaaatctgcc aaagcccgca cgccttcaag cggcatcgca ttataaatgc
     2941 tggcgcgcat cccgccgaca gacttatagc ccttcaacag gcacaagccc tgcaattcgg
     3001 cttccagcac aaaacggcgg tccaagtctt cgcttgcggt tttgaagacc acgttcattt
     3061 tggagcgcgc atcaggatga atatcgttga tgtaaaaacc gccgctgcca tctatcgtct
     3121 catacaaggt ttgcgccttc agccgattga ccgcttcaat ttttttcaca ccgccctgcg
     3181 cctgcagcca gcggaacacc agccccgaca tataaatcgc gtaagttgac ggcgtgttgt
     3241 acataccgtc gcggttcaaa tgagaacggt agttgaacac atcgggaata tcgttcggac
     3301 aacgctcgag caaatcctca cgcacaatca ccaccgtaac tcctgccggc ccgatgtttt
     3361 tctgtgcgcc tgcgtaaatc agtccgtagt cggcaacatc aaactcacgc gacagaatct
     3421 cgctggacat atcgcacacc aacggcggca tgccgtctga aaggcgcggc acttcacggt
     3481 attgcagccc gttgacagtt tcattgacgg caaaatggac aaacgccgaa tcgggtgcaa
     3541 catcccacgt ttccacaggc ggcaggtcga gatagtcgaa ctgctcgccc ccgtgcgccg
     3601 ccaaacggat ttccgtatcg gtcaaacggc tcatctgttc ataggcgata cggctccagt
     3661 tgcccgttac caccgcgtcg gcagtgcgga aaccgtgtgc cagattcatg gctgccatat
     3721 taaattgggt tgttgctccg ccctgaagaa acaatatctt atagttgtca ggcactttca
     3781 aaagctgcct caaatcctgt tccgcatgat gcaggatgct caaaaacatt tccgaacggt
     3841 ggctcatttc catcacggaa aaacccgtac cgttgtagtc cgacatttcc tgctgcgccg
     3901 tcctcaacac agcttcaggc aacacggcag ggccggcgga aaaattgtaa atcggataaa
     3961 gagacatgat gcagccctgg ttctgaacaa taacccgccc gattttaggc ttgcagcagg
     4021 ctttgtgcaa ggatgggaaa tacctgccct ccgcccgatt ccatgccgcc cgaacacggg
     4081 aaataatatc aatatattga tttacaaaca taaaaatcat gctagcgaca aatagataca
     4141 tttgttttgt caacaatatt cacgatttcc cattacaaac ctcccttaca cccgcttttt
     4201 tccgtcccaa aaacacaaaa taaatcaaca ctttcatttc tccgcaaaag cggttataat
     4261 cacgccgatt tttcaacttt tgacgaaaaa tggccacggg gccatttttt tattatgtac
     4321 atagggagca gcatggatat tcaaaccatc ctcgaaaaaa ccctgcccgg cctgggatac
     4381 gaactggtcg atttcgaact ggccgcgcaa ggaacattgc gcgtgttcat cgacaaagaa
     4441 ggcggcatta ccgtcgaaga ctgcgccacc gtcagcaacc acttgagccg cgtcttcatg
     4501 gttgaagaca tcggctacaa aaacctggaa atttccagcc ccggactcga ccgccccttg
     4561 aaaaaagccg ccgacttcgt gcgctttgcc ggtcagaatg ccaaaatcaa aacccgcctg
     4621 ccgataggcg gtcagaaaaa ctttatcggt aaaatcgaag gctgcgaaaa cgacactgtt
     4681 accgtttcct tcgacggcaa aaccgtacaa atcgaattgg gcaacatcga caaagcccgc
     4741 ctgcgccccg aattcaaatt ctaaaacaca gcaatattgg agatgttcaa aatgagtcgt
     4801 gaaatgttac agctggcaga agcactggca agcgaaaaaa acgttgatgc ggaagtcgtc
     4861 ttccaagcac tggaattcgc actctctacc gccgccaaga aaaaggcaga ccgcgaacac
     4921 atggacgtgc gcgtccaaat caaccgcgat accggcgaat accaaacctt ccgccgctgg
     4981 ctgattgtgg ccgatgaaga ctatacctat cccgatgtcg aaaaaaccat cgaggaaatc
     5041 caagaggaaa tccccgatac gaccatccaa atcggcgaat actacgaaga gcagctgccc
     5101 aacgaaggct tcggccgcca agcggcgcaa actgccaaac aaatcatcct gcaacgcatc
     5161 cgcgatgccg agcgcgagca gaatctgaac gagttcctcg ccgtcaaaga agacatcgtg
     5221 tccggcacgg tcaaacgcgt cgaacgccac ggcatcatcg tcgaagtcgt tgccggcaaa
     5281 ctggacgcgc tgattccgcg cgaccaaatg attccgcgcg aaaacttccg cagcggcgac
     5341 cgcatccgcg ccctcttcct gcgcgtcgaa gaaatcggca acaccggccg caaacaaatc
     5401 atcctgagcc gtacttccgg cgatttcctc gtcaaactgt acgccaatga agtacctgaa
     5461 attgcaggcg gcatgcttga aatccgcgct gtcgcccgcg acccgggcca acgtgccaaa
     5521 gtcgccgtca aagccaacga ccagcgcatc gatccgcaag gcacctgtat cggcgttcgc
     5581 ggttcgcgtg tcaatgccgt cagcaatgaa ttgtccggcg agcgcatcga cgttgtcctt
     5641 tggtcgcccg agcctgccca attcgtcatg agcgcgctct cacccgccga agtcagccgc
     5701 atcgtcatcg acgaagacaa acacgccgtc gatgtcatcg ttgccgagga ccggctcgcg
     5761 ctcgccatcg gacgcggcgg tcaaaacgtg cgccttgctt ccgacctgac cggctggcag
     5821 ctcaacatca tgacttccgc cgaagcagac gaacgcaatg cggcagaaga tgccgccatc
     5881 cgccgcctgt ttatgaatca cttgaatgta gatgaagaaa ccgccgacgt actggttcaa
     5941 gaaggttttg caaccttgga agaagtcgcc tatgttcctg ccgccgaact gcttgccatt
     6001 gaaggatttg acgaagaaat cgtcgatatg ctccgcaacc gtgcccgcga tgccatcctg
     6061 accatggcga ttgctgccga agaaaaactg ggcgaagtat ccgacgatat gcgtaacctc
     6121 gaaggcgtag atgccgatat gctcctcagc cttgccgaag caggcattac cacccgcgac
     6181 gacttggcag agcttgccgt ggacgaactg attgaaatca ccggtgtaaa cgaagaaact
     6241 gcaaaagccg tcatcctgac cgcacgcgaa cactggttta ccgaagacaa ataaaggggg
     6301 tacagatgag taacacaacc gtagaacaat ttgccgccga gctgaaacgc cccgtcgaag
     6361 acctgttgaa acagttgaaa gaagccggcg tcagcaaaaa cagcggcagc gattccctga
     6421 cgctggacga caaacagctt ctgaacgcct acctgaccaa gaaaaacggc agcaacggcg
     6481 gcaccatcag catccgccgc accaaaaccg aagtcagcac cgttgacggc gtaaaagtcg
     6541 aaacacgcaa acgcggacgc actgtcaaca ttccttctgc cgaagaattg gcagcacaag
     6601 taaaagccgc ccaaacccaa gccgcacctg ttcagccgga gcagacggca gaagacgcgg
     6661 taaaagcccg agccgaagct gccgcacgcg cagaagcccg tgccaaggca gaagcggaag
     6721 cggcaaaact gaaagcggca aaagcaggca acaaagccaa acctgccgcg cagaaaccta
     6781 ccgaagcaaa agccgaaacc gcacccgttg cggcggaaac caaacccgcc gagcccaaag
     6841 aaaaagccgt caagccgaaa cacgagcgaa acggcaaagg caaagatgcc aaaaaaccgg
     6901 cgaaacctgc cgcacctgcc gtgccgcaac ccgtggtcag cgcggaagaa caggcgcaac
     6961 gcgacgaaga ggcgcgccgc gccgccgcat tgcgcgccca ccaggaagcc ctgttgaaag
     7021 agaaacagga acgccaggca cgtcgcgaag ccatgaaaca acaggcagaa caacaggcaa
     7081 aagccgcaca ggaagccaaa accggcagac agcgtcccgc caaacctacc gagaaaccgc
     7141 aggcagccgc accggccgtc gaaaacaaac ctgtcaatcc ggcaaaagcg aaaaaagaag
     7201 accgccgcaa ccgcgatgac gaaggtcaag gccgcaacgc caaaggcaaa ggtgcaaaag
     7261 gcgggcgtga ccgcaacaat gcccgcaacg gcggcgacga gcgcgtacgc ggcggcaaga
     7321 aaggcaaaaa actcaaactc gagccgaacc aacacgcctt ccaagcaccg accgaacccg
     7381 tcgtacacga ggttttggtt cccgaaacca ttaccgttgc cgatttggcg cacaaaatgg
     7441 cggtcaaagg cgtggaagtg gtcaaagccc tgatgaagat gggcatgatg gttaccatca
     7501 accaatccat cgaccaagac accgccctga ttgtcgtcga agaactcgga cacatcggca
     7561 aacccgccgc cgccgacgat cccgaagcct tcttgggcga gggcgcggaa gcggtggaag
     7621 ccgaagcatt gccgcgtccg cccgtcgtta ccgtcatggg ccacgtcgac cacggcaaaa
     7681 cctcgctgct ggactacatc cgccgcgcca aagtggtaca gggcgaagcg ggcggcatta
     7741 cgcagcacat cggcgcgtac cacgtcaaaa ccccgcgcgg cgtgattacc ttcttggaca
     7801 ccccgggcca cgaagccttt accgctatgc gcgcgcgcgg cgcgaaagca accgatatcg
     7861 tgattcttgt ggtcgccgcc gacgacggcg tgatgccgca aaccatcgag gcaattgccc
     7921 acgctaaagc ggcaggcgtt ccgattgtgg ttgccgtcaa taaaatcgat aaagacactg
     7981 ccaaccccga acgcatccgt caggaactga cccaacacga agtcatcccc gacgattggg
     8041 gcggcacggt tcaattcatc gacgtttccg cgaaaaaagg aacgaacatc gacgcgctgc
     8101 tcgaagccgt attgctcgaa gccgaagtat tggaactgac cgcacctgtc gatgcacccg
     8161 ccaaaggcat catcgtcgag gcgcgtttgg acaaagggcg cggcgcggtt gccacattgc
     8221 tggttcaaaa cggtacgctg aaaaaaggcg acatgctgct ggccggtacg gcattcggca
     8281 aaatccgcgc gatggtcgat gaaaacggca aatccattac cgaagccggc ccgtccatcc
     8341 ccgtcgaaat cctcggcttg tccgacgtac cgaatgcggg tgaagacgcg atggtattgg
     8401 cggacgagaa aaaagcgcgc gaaatcgccc tcttccgcca aggcaaatac cgcgacgtgc
     8461 gccttgccaa acagcaggcg gcgaagctgg aaaatatgtt caacaatatg ggcgaaaccc
     8521 aggcccaatc tttgtcggtc atcatcaagg cagacgttca gggctcttac gaggctttgg
     8581 cgggcagcct gaaaaaactg tccgccgacg aggtgaaagt gaacgtgttg cacagcggcg
     8641 tgggcggcat taccgaatcg gatgtcaacc ttgccatcgc ttcgggcgcg ttcattatcg
     8701 gctttaacgt gcgtgcagat gcctcttcgc gcaaacttgc cgaaaatgaa aacgtggaaa
     8761 tccgctacta caacatcatc tacgatgcca tcgacgacgt gaaggcggcg atgagcggca
     8821 tgctttctcc cgaaaagaaa gaacaggtta ccggtacggt cgaaatccgt caggtcatct
     8881 ccgtttccaa ggtcggcaac attgcaggct gtatggtcac cgacggcgtg gtcaaacgcg
     8941 attcccatat ccgcctcatc cgcaacaacg tggtcatcca cacgggcgaa ctggcttcgt
     9001 tgaaacgcta taaagacgac gtaaaagaag tccgcatggg cttcgagtgc ggtctgatgc
     9061 tcaaaggcta caacgaaatc atggaaggcg accaactgga atgcttcgac atcgtcgaag
     9121 ttgcccgcac cctgtaattc ctttgcaaat aaaatgccgt ctgaagcgtt cagacggcaa
     9181 cgaaacgggt tctgtatcat acagaacccg ttttttgtcg caaatcggct tcagcgaccc
     9241 tcctgcctta tcccgatttg aatctgactt gccatacaaa caggcttcag acggcattat
     9301 ttgcccgcca aacgtatccc gatcttctcc gcatattccc tgcgttcggc gcggctggtt
     9361 tccgggcggt gcgtattgag cgacgaccat ttccaatgac tgcgggcttt gttgagttcg
     9421 ggcgggagtt tggcggcatc ccacggggct ttgcggctgt gcagctcgat atccgactgt
     9481 gccgcgtgtc cgcgcgtttg caggacgtgg agcagatcga gggcgcgggc ggcgagcagg
     9541 gtcagggttt cagggtcggt gtgcagggtt tgacggccgg cgagtttgtc ggaaatggtg
     9601 cgggtattgg gcaggatgcc gcccaaaaag ccgccgattg ccgtacccaa tccgagcgag
     9661 ccgccgagtg tggcgatgtc cagccccaag ccgatgagcg cgccggttgc cgcgcccgtg
     9721 ccggtgcgga tgccgtattg tttgagcaat tcgctgtcga acgggtcttg gcggaaggct
     9781 tgcggcatcc agtcgccgcc gtcgatttcg ctgtggtaga aacggtaaag ggcaaacagc
     9841 cgctgctgca tctgccgttc gagttggcgt atttccgcct gcatggtttg cagcacggtg
     9901 gcggtatcct cgttttcgtc cacttcctgc ctgaaggcgg cggcatcgag caggaaatcg
     9961 gcgatttcgc ggcgcgcttc gccgtccagc cgctgccatt cgcgccggcg catggctgtc
    10021 aggcggtcaa gtgtgctgcg ttcgggcaac atggtggcga ggttttccca caggcgcaat
    10081 tcgccttcaa aatcaaaggc gacggtgtcg aaccctgcga aaacgtgcag gtttctcctc
    10141 gccagcatgg ttgtccacga ttcgggaagc tgtccgccgg taaagttgaa cacgggcata
    10201 accggtttgg cacaccatga aaggatggtc aattcatccc gatatttgtc gaggacgggt
    10261 tcgcgcgcgt cgatgacgta cattgccata tcgctttgca aaacctgccg cagcactttg
    10321 gcttcttggt tgaaatcgtg atgcgcgccg tggctgccga gaaactgttg cagccgctcg
    10381 atgccgtctg aacgattgtc cgtatggttt tccagccatt ccaaaacacc gcccgcgtct
    10441 tcgagtccgg gcgtgtcata caggaaaacc aacatgtccg cgccgtcgct gatggcggct
    10501 tcttcgacat ggcgtgtggt ggacggtgcg tttctgactt cgccgaagcc gctgtcgcgc
    10561 aacagggtgc gcaggagcga ggttttgccg gtgttggtgt gtcccacgac ggcgagggaa
    10621 aggggttgtt tgttcatgat gtttttgaag aatggatttt cagacggtct tttttcagaa
    10681 tggcggctta acagaacatt tcaagtgagt ttattggtct ttcaaacggc cttcctgcgc
    10741 caccctgtca ggctcaagcc acgccgcgcc gcattcggtc agcgcgttac gccaatgttc
    10801 cagcttttcc gaaaggtcgt ctgaaagccc ctgttccgcc aaaagctgca ccaccgcgcc
    10861 gccctgcgcc gcttccgaaa gccgcacaat ctgccgcagc acgccccggt ccggcacagt
    10921 ttgggcgcgt acgccgataa gcagttgcgc cggtttctgc ttcagctctg tctccagcgc
    10981 ggcaacctgt tcccgattgg cggcaacgcc cttatccagc cattcctgcg ccagcctgcc
    11041 ctcgaaccat tggccgtcct gccactcggt ctccagcatg agcgcccatt tcggcgcatc
    11101 gttcaagacg attttcggcg aaacggcgga cacggtttcc cgacgcgtat ccgcatcggt
    11161 gattttgttc tgccagcggc ggatgaccgc ctgataatag gttttttcca aatccaatcc
    11221 gttttcgctt gttttcaaaa ggattttaca cactacccaa gccaagaggc gcggcaggat
    11281 gccgtagcag acgatactgc cgaccagcag ccccgaccaa gcccgcgcat cggcaatatt
    11341 gccgttcaga cgaccttcga tgaccgcccg cgcatcgggg acagggaaac cgagtttcga
    11401 cggcagccat gccaacattt ccaccgcgcg taccgaagcg gcattgctca acagcgtgct
    11461 ttcccagttg aacgtatatt gccgcaccaa aagcagcagc aataccgaca ccagcattcc
    11521 gagcagcgtg cagagccaca agctgtgcgc cgttgcgcct attttccatc gtaccgaagg
    11581 ttgccgccac tggtccgcat acagccgcaa caccgcctga tttacagggc ctttgccccg
    11641 aaaccacgtc gccggactgc tgaaaaaccg ccccactttc acgcgcagga acaacgttgc
    11701 caaccatact gccagcatca gcgtattcat gcccaacact cccgccaaaa ctaaaaagaa
    11761 attcagcccc tgattgtcca tcagaagata agtgcctgaa aatccggcgg taaacatcat
    11821 cgatgccgcc accacccata accagaacga ccccgcacgc acacgttcca acgtgtcccg
    11881 cagcatacgg tccctgtcga tcatctccga ccgacggatg attttttcct ccgtactgcc
    11941 gtccacgcgg cgcaaagcct ccgtcgcctg cacgggatcg ccgctgaaaa taaaaccgcc
    12001 ttcatccaaa atacggacca gctcaaccag ttttcgggat ggattcaaca taaaatgccg
    12061 tctgaaaata aaaaacaaat tttaacacac gcattttcaa gaatattcac agtgtaggca
    12121 aagagtaaat cccacacaga ggcaaaagta tcggcgtaaa ctgactgcct ctactttccc
    12181 gaaagattgt gcgatgtatg caggcgaacg cttcaatact tacagccatt tgagcggttt
    12241 gattctggcg gcggcaggtt tgatgctgat gctgctgaaa accataggac acggggacgg
    12301 ctaccgtatc ttcagcgtat cggtttacgg catcagcctt cttctgctct atttgagttc
    12361 ctcgctgtac cacggaattg cagccggaaa actgaaaagc attttgaaaa aaaccgacca
    12421 ctgcatgatt tatgtgctga ttgccggaag ctacacaccg tttgcactgg tttctttgag
    12481 aaacgggccg ggctggacgg tattttcact gtcctggctg ctggcggctg caggaatcgc
    12541 acaagaactc accatcggac ggaaaagcga aaaacgtctg ctgtctattg cgatttatat
    12601 cgtaatgggc tggatggtct tggcggtaat gaaatccctg acagcctcac tcccgccggc
    12661 aggactggct tggctggcgg caggcggtat gctgtacagc gtcggcattt actggtttgt
    12721 aaacgatgaa aaaatccgac acgggcacgg aatctggcat ctgttcgtat tgggcggcag
    12781 cataacccaa tttgtcagcg tgtacggtta tgtaatctga atgccgtctg aaacacaaaa
    12841 acctcccaaa cctgaaggca gggaggtttt ctctttgccg ggcattattg tttatcgtgg
    12901 aactcgtgga attcatactg ataggacaaa tcccgacccg cttttttctg tgccaaataa
    12961 tcatcataaa tggcgcggat ttccttacgc agcaagaaca gggcaatcag gttggggata
    13021 accataaagc cgttgaacat atccgacagg ctccaaacca aatcgacttt gccgagcgta
    13081 cccaaaacga tagcaagcag aaccaatgcg cgatagatgc ccaagtgtct tcccctgaaa
    13141 agaaaacgga tgttggactc gccgaaataa taccagccga taatggtcgt aaaggcgaag
    13201 aaggtcagac acacggcaag caattgcgaa ccgaagcccg gaaatgcctt gttaaaggca
    13261 aattgagtaa ccgccgcgcc ctgttcgccc gaaaggttgg catcggtcag caggataatc
    13321 aatgccgtag ccgtacatac caaaatcgta tcgataaata caccgacaaa tgccgtcata
    13381 ccttgctgaa caggatgctt cacatccgca gtcgcgtggg cgtgcggagt cgaacccata
    13441 cctgcttcgt tggaaaacag accgcgcgcc acgccgaaac gtatcgcttc acgcataccg
    13501 atacccgcag caccgcccaa aacggcctcg ggattgaagg cggcggtaaa gatgtggttg
    13561 aacatcggca caatatggtc ggaaaattca aacaggataa cgacggcgca caaaatataa
    13621 acaaccgcca taaacggcac gacaaaccgg gcaatattgg caatacggtt cacgccgcca
    13681 atcacaacca tgcccgcaag gacggcaaac acaataccga ctgccaaaga aggcacatca
    13741 aatgcaatgg taacggcaga agcgatggag tttgcctgag tcgcattgcc gataaagccc
    13801 aacgcgacaa tcagcgcgat ggagaaaaag cccgacagga aacgcgccgc gcccctgccg
    13861 attttcggag tcagaccgtg cgtaatataa aacgccggcc cgccgatgta tttgccgtgg
    13921 ctgacgacgc ggtatttctg cgccagcagt gcttccgcaa aaatcgtgga catccccaaa
    13981 acggcagaaa gccacatcca aaaaatcgca cccggcccgc ctgcggtaat ggcggtcgcc
    14041 acaccggcga cgttgcccgt accgatttgc gcggatatag caaccgccaa cgcctgaaac
    14101 tgcgataagg acttaccgtc tttatcacct ttggcaaaca agccgccgaa tacggatttg
    14161 aatcccgcgc ccagcttggt aatctgcggc gcaccaagat acagcgtaaa aaacaggccg
    14221 atacccaaaa gcgcataaat cagcaggtag ccccaaagaa accgattgac tgtacccacc
    14281 agaacagaca atatattttc cataaaataa accttatctt acgattaaaa tgactgtttt
    14341 ccaaaagaca ttccaataag gaaacacggc gagcagaccg tatttgccgc aacagatgcc
    14401 ttaaattgtc aacaatccga gagaagctgt gccagcatac cgtaaaatat cgttaattaa
    14461 aatatttctt tatttttaag cggaaagcgg aggaaatcgt tttcagacgg catcgacaac
    14521 ggcacggcat aaaacaggat attttgggta cttgcaactt atgttaaaat gccgaccgta
    14581 aaaaatctga caaaaacaga ttaattattt gaaataagaa aggaaattta tggcaggcca
    14641 tagcaagtgg gcgaatatcc agcataaaaa agcccgtcag gatgccaaac gcggcaaaat
    14701 cttcacccgt ttaatcaaag aaatcaccgt tgcggcgcgt atgggcggcg gcgatcccgg
    14761 cgcaaatccg cgcctgcgtc tggctttgga aaaagcagcc gaaaacaata tgcccaaaga
    14821 caatgtgcaa cgcgccatcg acaaaggtac gggtaacttg gaaggcgtgg aatacatcgg
    14881 gttgcgctac gaaggctacg gcatcggcgg cgcagctttg atggtggact gcctgaccga
    14941 caacaaaacc cgcaccgttg cggacgtacg ccacgcattt accaaaaacg gcggcaactt
    15001 gggtaccgac ggctgcgtgg cgttcaactt cgtgcatcag ggctatttgg tattcgaacc
    15061 cggcgttgac gaagacgcgc tgatggaagc ggctttggaa gccggtgcgg aagacgtggt
    15121 taccaacgac gacggttcca tcgaagtcat taccgcgcca aatgattggg cgggcgtaaa
    15181 atccgctttg gaggcggcag gttacaaatc cgttgacggc gacgttacga tgcgcgccca
    15241 aaacgaaacc gaactctccg gcgacgatgc cgtcaaaatg caaaaactga ttgacgcgct
    15301 ggaagacttg gacgacgtgc aagacgttta cacttccgcc gtattgaatc tggactgata
    15361 cgcagcacag cagacataca acaaaatgcc gtctgaacct ttcagacggc attgatttat
    15421 ttagcccttg cccacgccca ccaaaccgtc aggacaaccg ccaaaaaata cgccgcgctc
    15481 caaacaggca aagcaacccc taacagataa tccggttcgg cacaatttcc gaacccgcgc
    15541 acaacaggct cgaaccaatc aaacaaaggc cagcccttca atcgaaacgt ccacggcgcg
    15601 ccgcacgaag gagccgcacc cggcggcagc gactgcaacc acaactgata tgccgcaaca
    15661 gaaatacccg taacggcggg aatactgata aacactgcgc ctgacagtcc gcccaccctg
    15721 cccttgggct tacacgccag cacaactgcc gcacacaatg cggttgccaa aacacataac
    15781 cgctgactga tgcacaaaac gcaaggctcc atacccaaaa catactgtgc cgccaaagaa
    15841 ccggcaaatg cacagaccga aacggcaaac agcagccaaa cggcttttct aaataacggg
    15901 gtcattttct caacacacca atcaaaatac cgatatgccg attttgctgg atatatcccg
    15961 agatggcaag ggacgaatcg acaccggcac aggtgcggac gatttcggtt ttcccgatat
    16021 gcacaaaacc tgacaaagga caaaacggcg atttgtccgc acaatgcccg aaaaaataca
    16081 tccggaggat ttgaatttga atttcggcaa atttagcgaa tcaaaagcaa cagccgataa
    16141 aaaaatcaaa agtttatttc aatgtttcaa cacacaggac gacacataaa gcaccgccct
    16201 atgtgccgtc ctgatttgga aggggttaca cccctcccaa atatagtgga ttaacaaaaa
    16261 ccggtacggc gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgccgcctt
    16321 gtcctgattt ttgttaatcc actataaagt ctgattctac cgccctaaag ggcagggttt
    16381 caaccgaaaa ggaaacacga tgaaagcata tgattttttg aataatcgga ttgacgggtt
    16441 tttgagggaa tttgttaccg gatagccatc gggcaagttt tttgcaaaat ttgaatcggt
    16501 cgggtaaatt ttcaaaaaat aattgacagc agataagaaa cggcggataa ttaccgccgt
    16561 tgagttgctt gatgcagctt gatttttctc ctctacttct cctttgtaga cttggcacac
    16621 attcaaccgg atgtgtgcat tttttatctc cgcttttttt gaaatttaat tacttttatt
    16681 gtttgaaatt ctattcttta agaaatttaa caagaaaaac gcttgctttt tgaccggaaa
    16741 agctgcataa ttcgttccgt tagctggttc gagtagtcag ttaatagttt ctcctctatt
    16801 tctcctttgt agacttggca cacattctat tgaatgtgtg cattttttat ctgaagcaac
    16861 aagcctctgt gcgtgatgtt gttatgtttc atttagatgt caaaccgcat acccggtctg
    16921 aaatattcaa tccaaatcca aaaccggatt ttctttgact tcctccatca caacataact
    16981 cctactctcc gaagcggcag gcagttgcaa taggatattg ccgagcatat cccgataggc
    17041 agacatatcg ggcaaacgta ctttaatcag gtagtcgtat tcgcccgaca ccagatggca
    17101 ctccataatt tgcggaattt tcagcacttc ttttttgaaa tcttcgaaaa tattgcccga
    17161 tttggattgc agcttcagct cgacaaaaac caatggcggt tttcccaaca gatggggatt
    17221 gagatgggcg tgatagccgg aaatataatg ttcccgctcc aaacggcata ccctctctgt
    17281 aacgggcgtg ctggacaacc ctaccttctc ggcaagctcc gtcatcggga tacgggcatt
    17341 ttgctgaaga attttgagga tgcggaaatc gatttt
//
LOCUS       DAXGCP010000045        17112 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.045, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000045 DAXGCP010000000
VERSION     DAXGCP010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17112
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.045"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(306..752)
                     /gene="smpB"
                     /locus_tag="ACFJCW_001262"
     CDS             complement(306..752)
                     /gene="smpB"
                     /locus_tag="ACFJCW_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HFC4151403.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLKQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(807..1817)
                     /gene="waaF"
                     /locus_tag="ACFJCW_001263"
     CDS             complement(807..1817)
                     /gene="waaF"
                     /locus_tag="ACFJCW_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HFC4151404.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKKLHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRELGRRGYDRVIVLPGSLKSAVIALAT
                     GIGKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHQSQEDFDGHSGFPEFSID
                     ERRREISIETFGLNLGKPVLAFCPGAEFGPAKRWPARHFAELGKHYSEAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDRAKIVSLHLECSPCFKRECPLGHTDCLNRLYPEKIVQAVEE
                     AV"
     gene            complement(1948..2023)
                     /locus_tag="ACFJCW_001264"
     tRNA            complement(1948..2023)
                     /locus_tag="ACFJCW_001264"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1988..1990),aa:Asn,seq:gtt)
     gene            complement(2214..2966)
                     /locus_tag="ACFJCW_001265"
     CDS             complement(2214..2966)
                     /locus_tag="ACFJCW_001265"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HFC4151405.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPYPNLTECEAGQF
                     ERDFWDNIGCAPEEYVRIRRAIRLLELRYPDSLNELVCAAIATPLGEMLAVFGVKGLC
                     LLEFVGQKYLEQEIAAVQKALRGRFVFREDGRMQFLRQELDLYFQCRLKTFATPLEMI
                     GTAFQKQAWDALLAIPYGETRSYKEQAQRLGNPKAVRAVAAANGQNKVSVMIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            3316..3873
                     /locus_tag="ACFJCW_001266"
                     /pseudo
     CDS             3316..3873
                     /locus_tag="ACFJCW_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273197.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            complement(3851..4666)
                     /locus_tag="ACFJCW_001267"
     CDS             complement(3851..4666)
                     /locus_tag="ACFJCW_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4151406.1"
                     /translation="MGALGGIVQHHTALYRSVAVYEPTVVIVRRGCKKLRWAGRELRI
                     AAGEAVGLAGGQTFDVINIPDSDGLYQAQWIAFEQETVERFAAQYGTAQAVCDAVKLP
                     HPGRMGAAFDYAAAVLADEEVPHNAAEAALCGVLAWLQHDGIGFAVYGGVNLMRQIRK
                     LITADVAADWSSAMLAQRLNCSEAALRRRLARQDTNFRTLLTDVRMMRALTLLQVTQW
                     SVAQIAGAVGYDCPSRFSARFKELFGCVPSVVRSEAEPAAYRRTGQVSVGVRP"
     gene            complement(5086..6231)
                     /gene="dapE"
                     /locus_tag="ACFJCW_001268"
     CDS             complement(5086..6231)
                     /gene="dapE"
                     /locus_tag="ACFJCW_001268"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HFC4151407.1"
                     /translation="MTETQSLELAKALISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPTERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARGELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGSLTVKGKQGHIAYPHLAVNPIHTFAPALLELTQ
                     EIWDEGNEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTETGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARTAIAETCGVEAELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLDDIPKLSAVYERILARLLAEKAV"
     gene            complement(6344..6964)
                     /locus_tag="ACFJCW_001269"
     CDS             complement(6344..6964)
                     /locus_tag="ACFJCW_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase"
                     /protein_id="HFC4151408.1"
                     /translation="MLTPKSCDLFNIPFFQFAQLKKYQPESIPQIKADYKENWQIWQQ
                     LIQQVAADLSEPFAPPHIERWCNGWQVRAHFFAYFKYAQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTEKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     RLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(6998..7507)
                     /locus_tag="ACFJCW_001270"
     CDS             complement(6998..7507)
                     /locus_tag="ACFJCW_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HFC4151409.1"
                     /translation="MNPFETQSVTFAEPIEMLYACHGKVRRFCGQIAMLSGYIAENGC
                     NQLVLQTIRQISRYFNVAAPLHHEDEEENFFPLLLQYAPQAREGVDELLRQHIGLYDN
                     WAAVSAEFAKLEADNAYIPDAEAFKRFVEGYDVHLAIEEPLFDMGKTFIPEEKLTEIG
                     EIMAARRCK"
     gene            complement(7602..8153)
                     /gene="azu"
                     /locus_tag="ACFJCW_001271"
     CDS             complement(7602..8153)
                     /gene="azu"
                     /locus_tag="ACFJCW_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HFC4151410.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAGEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLDPAKLADG
                     DYKFACTFPGHGALMNGKVTLVD"
     gene            complement(8436..8858)
                     /locus_tag="ACFJCW_001272"
     CDS             complement(8436..8858)
                     /locus_tag="ACFJCW_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HFC4151411.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDASIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFDSAAAKLEERHPELAEALEELVRKYGA"
     gene            8990..11740
                     /gene="secA"
                     /locus_tag="ACFJCW_001273"
     CDS             8990..11740
                     /gene="secA"
                     /locus_tag="ACFJCW_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HFC4151412.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRVLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSETGHEH
                     AEQILTQMGLLAENDSLYSAANISLMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSRLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDIGDLMQEIR
                     SDAVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLQEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQAIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAAVEEQPVGNIQSIHSES
                     PDIEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            11885..13657
                     /gene="dnaG"
                     /locus_tag="ACFJCW_001274"
     CDS             11885..13657
                     /gene="dnaG"
                     /locus_tag="ACFJCW_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HFC4151413.1"
                     /translation="MIPSDFIDELLAKTDIVGIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAAAADFYAQQLKFNPAAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRHYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEAERILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLVQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETINRIFRSALQSEEMEGGGEEDCENFQIGIKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            13844..15772
                     /gene="rpoD"
                     /locus_tag="ACFJCW_001275"
     CDS             13844..15772
                     /gene="rpoD"
                     /locus_tag="ACFJCW_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HFC4151414.1"
                     /translation="MSKNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKICKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGCLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLQWIEEEIAKGRVWSNALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            complement(15812..15997)
                     /locus_tag="ACFJCW_001276"
                     /pseudo
     CDS             complement(15812..15997)
                     /locus_tag="ACFJCW_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696979.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
     gene            complement(16175..16495)
                     /locus_tag="ACFJCW_001277"
                     /pseudo
     CDS             complement(16175..16495)
                     /locus_tag="ACFJCW_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713917.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Dna2/Cas4 domain-containing protein"
     gene            complement(16456..16812)
                     /gene="cas1"
                     /locus_tag="ACFJCW_001278"
                     /pseudo
     CDS             complement(16456..16812)
                     /gene="cas1"
                     /locus_tag="ACFJCW_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762781.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004520 - DNA endonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated endonuclease Cas1"
     gene            complement(16872..>17112)
                     /locus_tag="ACFJCW_001279"
     CDS             complement(16872..>17112)
                     /locus_tag="ACFJCW_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151415.1"
                     /translation="VFNYAISGMGHRLSLEKISISQCPQCGGEMKYYNKPIEWENIRY
                     SDGSKKRRVTRTTPALECKRNREHWYKVDPAEDKI"
BASE COUNT         4345 a         4883 c         4152 g         3732 t
ORIGIN      
        1 atgtcattta gttcaaattt tctctattta tttcttattt attaaaagta aacgtttgct
       61 ttttgctatt ttatcaagcc ggtttgaaaa tgtgtataat tgccctcgtt atttacaaaa
      121 atttcaggaa aaatgaccgc actttaccct tggctaatgc caatttatca tcaaattgct
      181 caaacctttg acgaaggttt ggggcatcat gccgtgctga ttaaagcgga tgctggttta
      241 ggtgtagaac gtttacgcat caggcggcag ccttgcccgt accgtctgaa gcattgtttc
      301 cacaatcagc gcgtatgctt aatcaaccgc tgtttctcgc gtttccagtc ggcttccttc
      361 atactttgtc gtttatcgtg ctgtttctta ccttttgcca aaccgatttc catcttgatt
      421 tttccgcgtg aaaaatgcaa atccagcggc acgatggtgt aacctgcacg ttcggttttt
      481 ccgattaact tattgatttc cgactgtttt aataacagtt tgcgcggacg tacggcatcc
      541 ggtttgatgt gtgtcgaagc cgtaggcaaa gccgtaatat ggcagccgac cagataaaac
      601 gcatcttttt tccaatagat ataactctct ttaagctgta cgcgcgcggc gcggattgct
      661 ttgacttccc agccttccaa gaccaaaccg gcttcaatcc ggtcttcaat gaaaaaatcg
      721 tgaaatgctt ttttattgtt cgcaatagcc ataaacatcc tatcaatatc cgccgtcaga
      781 cggtataaat ccgaaaacag aagccatcat accgcctctt caaccgcctg cacaatcttc
      841 tcgggataca gcctgttgag gcagtcggta tgccccaacg ggcattcacg tttgaaacag
      901 ggcgaacatt ccaagtgcag gctgacgatt ttcgccctgt cgctcaaagg cggcgtatgc
      961 gtcgggctgg aagaaccgta aaccgccact accttcctgc ccaaagcagc cgccaaatgc
     1021 atcagcccgc tgtcgttgca cacgaccgtg tccgccaacg acagcaaatc cattgcctgc
     1081 gacaaatcgg ttttgccgca caaattgaca cacatgccgt ctgaaaggca gttgatttct
     1141 tcggcgattt catcatcttt ttgcgaaccg aacaaccaaa cctgccaacc cgcctccgaa
     1201 tagtgtttgc ccaactcggc aaaatgcctt gccggccaac gctttgccgg cccgaattcc
     1261 gcacccgggc aaaaagccag aacaggcttt ccaagattca aaccgaaagt ttcaatagaa
     1321 atttcccgcc gccgttcatc aatggaaaac tcggggaatc ccgaatgccc gtcaaaatct
     1381 tcctgactct gatgcgcgag agccgtatat cggtccacca tcaaaggcag acgttcctta
     1441 tccagcctgc gtatatcgtt caacagaaaa taacggcttt cgccgacata acccgttctt
     1501 tttccgatgc ccgttgccag cgcgatgact gccgacttca aagaacccgg caacacgata
     1561 accctgtcgt atccgcgccg tcccaactcc ctgccgaccc gccaacggcg tttcaactcc
     1621 aacgcaccgt gtccgaacgg attttcaaga atctcattca cttccggcat acgctcgaac
     1681 accgccatcg accacttcgg tgcgaacaca tcaatcgtgc aaccgggatg aagtttcttc
     1741 aaacggcgga acaagggctg ggtcatcacg cagtcgccta tccaactggg agaaataatc
     1801 aggattttga tagacataaa acgaaaccga aatcagacag gcagaatttt accgcgaaac
     1861 cgttggaaaa cctatctcgc cgcattccga acgccggacg tgcaaatgtg aaaaagcccg
     1921 aacattcaag ttcgggcttc aaaattctgg ctccccgacc tgggctcgaa ccagggacct
     1981 gcggattaac agtccgtcgc tctaccgact gagctatcgg ggaatggggc gtattatagc
     2041 gtccggaaaa aatgtgtcaa tccttaattt tggaaaaatg ggcgacaaaa cgacaagcat
     2101 atgaatcaga aagacattaa gaccgatgcc ttaaaaggat tgccgttgta tgaattttca
     2161 cagccgtcat cacaccatat ttaagcccga tgagccgttc tgcatttccc cgcttaaaac
     2221 aatgccgtct gaacttcgcc gcgttccaaa gccagtaaaa actgtttgcg gttcaacccg
     2281 cccgcgtagc cggtcagttt gccgtcgctg ccgatgacgc ggtggcaggg aatcatgaca
     2341 gacaccttgt tctgcccgtt ggcggcggca acggcgcgga cggctttggg gttgcccaaa
     2401 cgctgcgcct gctccttata actgcgcgtt tcgccgtaag gaatcgccaa aagcgcgtcc
     2461 cacgcctgtt tttgaaacgc cgtaccaatc atttccaagg gcgtggcaaa ggttttcaga
     2521 cggcattgga aatacaaatc caattcctga cgcaaaaatt gcatccgccc gtcttcccga
     2581 aacacaaacc gtccgcgcaa ggctttttgg acggcggcaa tttcctgttc caaatacttc
     2641 tgtccgacaa actccagcag gcacaatccc ttaacgccga acaccgccaa catctcgccc
     2701 aaaggcgtgg caatggcggc acacaccagc tcgttcaagc tgtcgggata acgtaattcc
     2761 aacagacgga tggcgcggcg gatacggaca tattcttcag gcgcgcagcc gatattgtcc
     2821 caaaaatccc gctcgaactg cccggcttcg cattccgtca gattgggata cggcataacg
     2881 ccgcactcaa aaacccgggt ttcgaggcaa tggcggattt catcccattt tgacggcaga
     2941 ttgtttaagg aaggcagggt aatcattcgt ttgctccgta tccctatcat aaatttgacg
     3001 gcgaaatccc cgatttccgc cattcccgca cgccggtaca ggaacaggct gcggcggaaa
     3061 ccttgagggt ctggttgcgg caatgcctaa atatacaata tttccaaagc atcagggaaa
     3121 ggaatgtttc aacacacagg acgacacata aagcgtcgcc ctatgaaaaa tttcagacgg
     3181 ccttcaaagg gtcgtctgaa accacgattt ttgcatttgc gcattccggc acatcatcca
     3241 accgtttcgg cacattcctg ccgccgttga cagcctataa tgaatccgct tattcatcaa
     3301 gcaaaggaat catctatgca aacccgcatc ctctccgccg tactgctggc tttttcaacc
     3361 gctgcctttg ccgggggcgc attcacgctg caattcgaca acccgtccga agacggcggc
     3421 ttcacgcaaa accagctttt gagcgcgcct tacggcttcg gctgttcggg cggcaatgct
     3481 tcgcccgcgc tgtcgtggaa aaacccgccc gcagggacaa aaagtttcgt cctgaccgtt
     3541 tacgataaag acgcgccgat cggtctggac cggatgcact gggtggtcgc cgacattccc
     3601 gccgatgtcc gccgcctgcc cgcaggcatt accgcacaat gaggcaggcc gcccaaaggc
     3661 gcgctgcaaa cccgcacgga cttcggcgcg ccgggctacg gcggcgcgtg tcctcccgaa
     3721 ggcaggaaac accgctacga attcacgctt accgcgctga aagtcgccaa gctgccgaac
     3781 atcaccgccg aatccacacc cgtgctggtc ggtttctcca ctaaggcaaa cagcttgggc
     3841 gaagcgaaac tcacggtcga acaccgacgc tgacctgccc cgtgcgccga tatgccgccg
     3901 gctccgcttc cgagcggacc accgacggta cgcaaccgaa cagctctttg aagcgcgcgc
     3961 tgaaacggga cgggcagtca tagccaaccg cgccggcaat ctgcgctacc gaccattgcg
     4021 taacctgcaa cagcgtcagc gcgcgcatca tgcgtacatc cgtcagcagc gtacggaaat
     4081 tcgtgtcctg ccgcgccaac cgccgccgca acgccgcctc gctgcaatta agccgctgcg
     4141 ccagcattgc cgacgaccag tccgcagcca catcggcagt aatcagtttg cggatttgcc
     4201 gcatcaggtt gacgcctccg tacacggcaa aaccgatgcc gtcatgctgc aaccacgcca
     4261 acacgccgca aagcgcggcc tccgccgcat tgtgcggcac ttcttcatcc gccagtaccg
     4321 cagccgcata atcaaacgcc gcgcccatac gcccggggtg cggcagcttc accgcatcgc
     4381 acactgcctg cgccgtcccg tattgtgcgg cgaacctttc tacggtttcc tgttcgaaag
     4441 caatccattg cgcctgatag aggccgtctg aatcgggaat attgatgacg tcaaacgtct
     4501 gcccgcctgc caagccgaca gcctcacccg ccgcaatcct caattcgcgc cccgcccacc
     4561 gcagcttctt gcatccgcgc cgcacgataa ccacggtcgg ttcatatacc gccacgctgc
     4621 ggtacaaggc ggtatgatgt tgcacgatgc cgcctaaagc acccaatcgt tcacgcgtat
     4681 gaaagtaatt tgacggcacg gttatattcc tcaatgtttc aacacacagg gccgcacata
     4741 aggcgcagcc ctgtttaccc tgatttggaa ggggttactt cccaaaaaat aaaccaaaat
     4801 tctactgccc tgaagggcag ggtttcaacc atattccgtc ggtgtgcctg caacttagct
     4861 ccctcccctg tggggagggt cggagggagg gtaaaacgtg gcagatacag acaatatttc
     4921 cgttaccgtc ccaatgccct ctccctaacc ctctcccacg ggagagggaa tggattaccg
     4981 ttcaaataaa tcgctctaca taaaaatcaa tgcgttatct caaactcatg ttgggtctaa
     5041 tcagattgtc ggacatccat atccgacaac cagcccatct ttttttcaga cggccttttc
     5101 agccaacaac cgcgccaata tcctctcata caccgccgac agcttcggaa tatcgtccag
     5161 ccgcacattt tcgttgattt ggtggatggt ggcattggac gggcctaatt cgatgagttc
     5221 tttcgcaatg gctttaatga agcgtccgtc cgaagtgccg ccggtggtgg acaattcggc
     5281 ctcaacgccg caggtttcgg caatggcggt gcgtgccacg tcggtcagtt tgcccgcgtg
     5341 ggtcaggaag ggctgtcccg aacacgacca ctgcaaatcg tattgcacgc cgtgtttgtc
     5401 caaaatggcg tggacgcgtt gtttcagccc tgtttcggtg gactctgtgg agaagcggaa
     5461 attgaatttg acgttcaact cgcccggaat gacgttggtc gcgcctgtgc cgccgttgat
     5521 attggaaatt tgaaagctgg tcggcgggaa gtattcgttg ccttcatccc aaatttcctg
     5581 cgtcagctct aacaaggccg gggcaaaagt atgtatggga ttcaccgcca aatgaggata
     5641 agcaatatgc ccttgcttgc ctttgacggt caggctgccc gacagcgagc cgcgccggcc
     5701 gtttttaatc atatcgccca atttgtccac ggcggtcggt tcgccgacga tgcagtagtc
     5761 aatcaactct ccgcgtgctt tcaacacatc gacgactttg gtcgtgccgt ccagtgcatc
     5821 gccctcttcg tcggaagtaa tcaagagtgc aatgctgcct tgatggtcgg gatgttcggc
     5881 aacaaagcgt tcgcaggcgg taacgaaaca ggcgatgctg gttttcatgt ccgccgcgcc
     5941 gcgcccgtat aatcttccgt cgcgctcggt cggttcgaac gggggcgaat cccatttttc
     6001 aacaggacct gtcggcacaa catcggtatg ccctgcaaaa cagacgacgg gagctttcgt
     6061 gccgcgtcgc aaccagatgt ttttggtgtc gccgaaatgg agttcttcag ccgcaaaacc
     6121 gattttgtgc aggcgttcgg caagcagttt ttggcaatct cggtcgtcgg gggtaacgga
     6181 cgggcgggaa atcaacgctt tggcgagttc tagggattgg gtttcggtca ttttgttcac
     6241 tttggaaatc aggtcgtctg aaatgtcctg aagctgattt tcagacgacc tccgggttgg
     6301 attggtgtat aagacgggca ttcgtacccg tcagttttct gaatcatttg ccgtgacagg
     6361 cttcgtaaag cggcagtaaa tcttccaccg tttcggctat ccattttgct acatcctgct
     6421 tgcccaaatc gtcgcgctca atgtgtttgc cgatgcagaa aaagtcttcg tcgttttgca
     6481 accttcggtc ggattcgctt tgttgtgcga cggtgcggta gtcgtcatat tcgctttccg
     6541 cgccgtgcca catatcgaat gcggcgtatt tttcggtatc gaaatcatcc agccagcggt
     6601 tgtactcggg cagcgcaatc ggcgacacgt cggctttgta gcaatgccag tccaagctga
     6661 cgctcaggcg gcggcggttg agcagtatcg acaggatggc ggcggaattt ttgtattggg
     6721 cgtatttgaa gtaggcgaag aaatgggcgc gaacctgcca gccgttacac cagcgttcga
     6781 tatgcggcgg ggcgaaaggt tcgctcaaat ctgcggcgac ctgctgtatc aactgctgcc
     6841 atatctgcca gttttccttg tagtcggctt tgatttgcgg aatgctctcg ggctggtatt
     6901 ttttgagctg ggcaaactgg aaaaacggga tattgaacaa atcgcagctt ttgggcgtca
     6961 gcataatata tccttgagac gattgtttca gacggcatta tttgcaccgg cgcgccgcca
     7021 tgatttcgcc gatttcggtc agcttctctt cggggataaa cgttttgccc atgtcgaaca
     7081 aaggctcttc aatcgccaga tgcacatcat atccctccac aaagcgtttg aacgcttccg
     7141 catcggggat ataagcgttg tctgcttcga gtttggcaaa ttcggcggaa acagccgccc
     7201 agttgtcgta cagcccgata tgttggcgca acagctcgtc cacgccttca cgggcttgcg
     7261 gcgcgtattg cagcagcagc gggaaaaagt tttcttcttc gtcctcatgg tgcagcggcg
     7321 cggcaacgtt gaaataccgg gagatttggc ggatggtttg caaaacaagc tgattgcagc
     7381 cgttttcggc gatatagccc gacaacatag caatctggcc gcaaaaacgg cgcactttgc
     7441 cgtggcaggc atacagcatt tcaatcggtt cggcaaaggt aacgctttgg gtttcaaacg
     7501 gattcatgtt ttcgttctca acggggactt ttcaagcagt cattttataa taaaacagcc
     7561 tgcacaaagc aggctgtctg tcttttgaaa ctttaagcgg attaatcgac caaagtcact
     7621 ttgccgttca tcaaagcacc gtgacccggg aaggtgcagg caaatttgta gtcgccgtca
     7681 gccaatttgg caggatccaa agtcagggaa gactcttcgc cgccgccgat cagtttggtg
     7741 tgggcaacaa cgcgcgcatc gtcaggtttg acatagtcgg tatcggcagc acctacgccg
     7801 tctttaaata cgccgtccat gtcttcagct ttggcaatca caaggttgtg acccatgctg
     7861 gctttgggtt gcgtaccggt atgtttcaga gtgatggtga actctttaca tgctttgctg
     7921 acttggatgt ctttggtgtt gaactgcata ttgtcgttgg attcgacagt tgccgcacag
     7981 ttgccggcag caggggcttc ggcagcatct gcaggagcag cttcggcggc aggcgcttcg
     8041 gaagcgggtg cttcaccggc aggagttgcc tcggcagcag gcgcggcagg ttcttgagag
     8101 caggcagcca aaccgataac ggcggcagaa atcagagcca gataagcttt catggtaaat
     8161 ctccaatcga taaaataata ttcggtttta cggaaatcaa agtgcaaccg ccattaacaa
     8221 aaccttgaaa aagattccgc cgtgttgcac aaacagatgt ttcggggcgg cattttgcta
     8281 caaacttcat ttgaaatcaa agcctgtttg caagtttaca atcgtttacc caaaaaaagg
     8341 gcaatcttac cccgaaccta tttctttagt attagggcag ccgtcccccg ccgcgcaaat
     8401 attaacggat atttacaaca tccctgccgg ccgccttatg ccccgtactt cctgaccagc
     8461 tcctccagtg cctccgccaa ttcgggatgc cgttcttcca actttgccgc cgccgaatcg
     8521 aaactctcca acgcagcctt actcaaatgc agggtattgg ttttcggcgg tttttccggt
     8581 tttggaacca gcctgaccga aacagaccgt atcgaagcat caagccctgc cagctgcggc
     8641 aataccgacg gggcaatcat cttcaaacgc gatgccgcca tattgtttgc cgccaaaagg
     8701 acaagcctgc cgtcttcgat acatgccgtc tgaaagtggg ggtgcaggtt ggcaggcagc
     8761 agttttttca cggcagcatc caaccgccgc cactgtcccg cctgtttcaa aagtccggaa
     8821 agcagcgcgt cccgcctgcc caactgttcc aaattcataa aacatacacc ccaaaagatt
     8881 gaaataccgc aaacgcgcct ttatttcaga cggcattagc actttgcaca aacgcttgtg
     8941 ttaaaatcgc gttttcgccc cactattata tcaggcgcag gaattattca tgctgacaaa
     9001 cattgccaag aaaatcttcg gcagccgcaa cgaccgcttg ctgaaacaat accgtaaatc
     9061 cgttgccaga atcaacgcgc tcgaagaaca gatgcaagcc ctaagcgatg ctgatctgca
     9121 agccaaaact gccgaattca aacaacgcct cgccgacggt cagactttgg acggcatttt
     9181 gcccgaagcc ttcgccgtct gccgcgaagc gtcccgccgc gtactcggta tgcgccactt
     9241 cgacgtgcag cttatcggcg gtatggtgct gcacgacggc aaaatcgccg aaatgcgtac
     9301 cggcgaaggc aaaaccctgg tcgccaccct cgccgtctat ctcaacgcgc tggccggcaa
     9361 aggcgtgcac gtcgttaccg tcaacgacta cctcgcctcg cgcgacgcag gcattatgga
     9421 gccgctctac aatttcctcg gtctgaccgt cggcgtgatt atttcagata tgcagccgtt
     9481 cgaccgtcaa aacgcctacg ctgccgacat tacctacggc acgaacaacg aattcggctt
     9541 cgactacctg cgcgacaata tggtaaccga ccaatacgac aaagtgcagc gcgaattgaa
     9601 ttttgccgtt gtcgatgaag tggactccat cttgattgac gaagcgcgca ccccgctgat
     9661 tatctccggt caggcagacg acaacatcca gctctaccaa atcatgaaca ccgttccgcc
     9721 ccacctcgtc cgtcaagaga cagaagaagg cgaaggcgac tattgggtcg acgaaaaggc
     9781 acatcaggtc atcctgagcg aaacaggtca cgaacacgcc gaacaaatcc tgacccaaat
     9841 ggggctgctg gcagaaaacg actcgctgta ctcggcggca aatatctccc tgatgcacca
     9901 ccttatggca gcattacgcg cgcactcgct gttccacaaa gaccaacatt acgttatcca
     9961 agacggcgaa atcgtcatcg ttgacgaatt tacaggccgt ctgatgtccg gccgccgctg
    10021 gtccgaaggc ctgcatcaag ccgtagaagc caaagaaggc gtggaaatca aacgcgaaaa
    10081 ccaaaccctc gcctccatca ccttccaaaa ctatttccgc ctgtacacca agctctccgg
    10141 tatgaccggt acggcagata ccgaggcttt cgagttccaa agcatctaca acctcgaaac
    10201 cgtcatcatc ccgaccaacc gccccgtaca gcgcaaagac ttcaacgacc agattttccg
    10261 ttccgccgaa gaaaaattcg aagccgtcgt caaagacatc gaggaatgcc acaaacgcgg
    10321 gcagcccgtc ctcgtcggta cgaccagcat cgaaaactcc gaactggtct cccgccttct
    10381 gcaaaaagcc ggactgccgc acaacgtcct caacgccaaa gaacacgaac gcgaagccct
    10441 gattgtcgcc caagccggca aagtcggcgc aattaccgtc gccaccaata tggcgggacg
    10501 cggtacggac atcgttttag gcggcaacct gaagcaccaa accgatgcca tccgcgccga
    10561 cgaaaccttg agcgacgaag agaaacaggc acaaatcgcc gcactcgaaa acggctggca
    10621 ggcagaacac gataaagtga tggaagcagg cggtttgcac atcatcggta cggaacgcca
    10681 cgaaagccgc cgtatcgaca accagttgcg cggacgttcc ggccgtcagg gcgaccccgg
    10741 atccagccgt ttctacctct cgtttgaaga cccgctgttg cgcctcttcg cactcgaccg
    10801 cgccgccgcc atcctcaacc gcctcgcccc cgaacgcggc gttgccatcg agcacaacct
    10861 gctgacgcgc caaatcgaag gggcgcaacg caaagtcgaa ggcagaaact tcgatatgcg
    10921 caaacaggtt ttggaatacg acgacgttgc caacgaacag cgcaaagtca tttacagcca
    10981 gcgcaacgaa attctgacca gcaaagacat cggcgacctg atgcaggaaa tccgttctga
    11041 tgccgtcagc gacctcgtgg atacctatat gccgcccgac agcatggaag aacaatggga
    11101 catcccgaca ctggaaaacc gcctggctgc cgaattcagg cttcaggaag acatccaatc
    11161 ctggctgaag gcggacaatg cgattgacgg tcaagacatc aaagagcgcc tgatcgaacg
    11221 tatcgaaaac gaatatgccg ccaaaaccga actggtcggc aagcaggcaa tggctgattt
    11281 cgagcgcaac gtgatgttgc aggccatcga caaccaatgg cgcgaacatc ttgccgccat
    11341 ggactacctg cgacaaggca tacacctgcg cagctatgcc cagaaaaatc cgaagcagga
    11401 atataaacgc gaagccttta ccatgttcca agacctgtgg aacggcatca aattccatat
    11461 cgcctccctg cttacttcgg ttcaaatcga acaaaaccct gtcgcggcgg ttgaagagca
    11521 acccgtcggc aacatccagt ccatccattc cgaatcgccc gatatagaag aacttttggg
    11581 tcagtcgcaa accgatctgg ttaccgaagc ctttaatccc gatgggacgg atttcagccc
    11641 cgaagccttg gaagcgcggg gacaaatcgt ccaccgcaac gacccctgcc cctgcggcag
    11701 cggtttgaaa tacaaacaat gccacggcaa attggcttaa gcgtttgaac gcaaatgccg
    11761 tctgaacatc cggtttccgg cttcagacgg cattttgcct gaaccgccac atccgaccgc
    11821 cattccgaaa aatcccgatt tcgtaccgtc cgtaccgaaa acagacatcc cgtcccccca
    11881 catcatgatt ccatccgact tcattgacga gcttctggcc aaaaccgata ttgtcggcat
    11941 catcgacgag caggttccgc tgaaaaaagg cggggcgaac tatatggcgt gttgcccgtt
    12001 ccacaaggaa aaaacaccgt cgttttcggt cagtccgacc aagcagtttt atcattgttt
    12061 cagttgcggg gcgcatggtt cggcgattgg ttttgtgatg gaacatcagg gactgtcgtt
    12121 tccggaggcg gttcagttcc ttgccgaccg cgtaggtatg attgtgccta aagtgcgcgg
    12181 gcagaacgat aatcccgaag tccgtgccga gcgcaagaaa aaacagcaga cgctggaaga
    12241 aacgacggcg gcggcagctg atttttacgc gcagcagctg aaattcaatc cggctgcgaa
    12301 agcttatttg gacaaacgcg gcttgagcgc ggaagtcatc gcgcattatg gtttgggcta
    12361 cgcgcccgac ggctggcagc ctttggcgca agtgttccaa ccgtatccga ataccgcgtt
    12421 ggtggatacg gggatggtga ttgacaatga ggggcggcat tacgaccgct tccgccatcg
    12481 gattatgttc cccatccgca atccgcgcgg gcaggtcatc ggtttcggcg gcagggtgct
    12541 ggacgactcg aaaccgaaat atttgaattc gcccgatacg cctttgttcg ataaggggaa
    12601 aaacctttac ggcttgtatg aggggcgtgc tgctgtaaaa gaggcagaac ggattttggt
    12661 ggtcgaaggc tatatggacg tggtcgcgct ggcacagttc ggcgtgggct acggtgtggc
    12721 ggccttgggc acggcgacga cggcggaaca cgtcaaaatc ctgatgcggc aggcggacag
    12781 tatttatttc tgtttcgacg gcgacagcgc ggggcgaaaa gcggcttggc gcgcgctgga
    12841 aaacgcgctg ccgcagttga aagacgacaa atcgctgcat tttttattcc tgccggaaga
    12901 acacgacccc gacagctaca tccgcgccta cggcaaagcg caatttgaag acgcgcttct
    12961 gaatcaaagc aagcctttgt cggaatattt ctgggaacac ctttcagacg gcattcatct
    13021 caatacgcag gaaggcaagg cggaattggt gaaaaccagt tcgccgcttt tggtgcagat
    13081 taccgcaccg gcattggctt atttgttaaa acaacggctt agcgagctgg tcggcatcga
    13141 ccccgacaac ctcgcgcaac tgctcggaca ggaagcgcca aagcggcacg tcaaacaaaa
    13201 aaactacaaa ctgcctccga tttccgtcaa acagcccgtt atgccgacat tggtgcaacg
    13261 gcaaatccgc agcctcttga taaatccgga ttgggctgca tatatagacc tgcccgatta
    13321 tctggcgttg gacggcgatt tcgcctgcct tgccaacctc gccgaaacca ttaaaaacca
    13381 tccttccgtg ccggcaaccg cacaggtttt ggaacatatg cgcggttcgc cctacgaaga
    13441 aacaatcaac cgcatcttcc ggtcggccct tcaatcggaa gaaatggaag gcggcggcga
    13501 agaagattgc gaaaacttcc aaatcggcat caaaaaactg ctcaatgagt taaaatacag
    13561 ccaaattgaa acattaaaac aaaaaagcct gcaatccggc ttaaatgaaa gcgagaaaaa
    13621 acttttgctg tcgctgctga ccgcaaaaca aaattgaccg gcggattccg ccatctgtaa
    13681 accgttatgc cgtctgaaaa gcattcaccc cggctgcaac aacgacacct gcagaacacc
    13741 catcccaaaa agccttcaga cggcatcaga gtaccctact ttgccacgcc ttcaggtgcg
    13801 tccaaacgca aaccgtcggc atcttgccaa cagaaagcag acaatgtcca aaaaccaaaa
    13861 tcacgaagaa taccaagacg atgcccgccc cctgacgatt gaggaacaac gtgcgcgcct
    13921 gcgccaactc atcattatgg gcaaagaacg cggctacatc acctactccg aaatcaacga
    13981 cgcactgccc gacgatatgt ccgatgccga tcaaatcgac aacatcgtca gtatgatttc
    14041 cggtttgggt atccaagtta ccgaacacgc ccctgatgcg gaagacatat tgttaagcga
    14101 caatgccgcc gttaccgacg atgatgccgt cgaagaagcc gaggccgccc tttccagcgc
    14161 agattccgag ttcggcagga cgaccgaccc cgtccgtatg tatatgcgcg aaatgggaca
    14221 ggtcgacctg ctgacccgcg aagacgaaat catcatcgcc aaaaaaatcg aaaacgccct
    14281 gaaaaatatg gttcaggcca tctccgcctg cccgggttcc attgcggaaa tcttagaact
    14341 catcgaaaaa atctgcaaag acgaaatccg cgtcgacgaa gtcgtagaag ccattatcga
    14401 cccgaatgaa gtattgctca acgaattggg cttggggcac ttggaaacca cagcacccga
    14461 gaaaccttcc aacgacaatt cggacgaaaa cgaagacgac gaagaatcgg aagaagatgc
    14521 ggatgaaatc tcggcagcca atctcgccga attgaaacaa aaagtcatcg gccactttgc
    14581 ccaaatcgaa aaagactaca aaaaaatgat cggctgtttg gaaaaacacc acagccggca
    14641 caaagactat ctcgcctacc gcgacgcgat tgccaacaaa ctgctggaag tccgtttcgc
    14701 cacccggcaa atcgacagcc tcagcagcag cctgcgcgga aaagtagaaa acatccgcaa
    14761 actcgaacgc gaaatccgcg acatctgcct cgaccgcgtc catatggaac gcgactactt
    14821 catccaaaac ttcctgcccg aaatcaccaa tctgcaatgg attgaagaag aaatcgccaa
    14881 aggcagggtt tggagcaacg cactcgaccg cttccgccac gccatcctcg aaaaacaaac
    14941 cgagttggcg gatatggaaa aagaaacccg catttccatc gaagagttga aagaaatcaa
    15001 caaaaatatg gtgtcgagcg aaaaagaaac cgcagccgcc aaacaggaaa tgattcaggc
    15061 aaacttgcgc ctcgtcattt ccattgccaa aaaatacacc aaccgtggct tgcagttcct
    15121 tgatttgatt caggaaggca acatcggcct gatgaaggcg gtcgacaagt tcgaataccg
    15181 ccggggctac aaattctcca cctacgcaac ctggtggatc cgccaggcaa ttacccgctc
    15241 gattgccgat caggcgcgta ccatccgtat tccggtacat atgattgaaa ccatcaacaa
    15301 gatgaaccgc atctcgcgcc aacaccttca agaaaccggc gaagaacccg attccgccaa
    15361 acttgccgaa ctgatgcaga tgcccgaaga caaaatccgc aaaatcatga aaatcgccaa
    15421 agagccgatt tcgatggaaa cccccatcgg cgacgacgac gattcgcact tgggcgactt
    15481 catcgaagat gccaacaatg ttgcgccggc cgatgcggca atgtacacca gcctgcacga
    15541 agtaaccaaa gaaatcctcg aaagcctgac accgcgtgag gcaaaagtcc tgcgtatgcg
    15601 tttcggcatc gatatgaaca ccgaccacac gctggaagaa gtcggcagac agtttgacgt
    15661 aacgcgcgaa cgcatccgtc aaatcgaggc aaaagcactc cgcaagctgc ggcatccgac
    15721 aagaagcgac cgtttgagaa gtttcttgga cagcgaagac agcaagctgt aaaccaaaaa
    15781 accgcaggtt tcaaatacct gcggtttttt cttacacaat aaacaacgct tccacatatc
    15841 ccacactccc atcccgtttc gccaacaact ccggctgaca gatttccacc agagagcagg
    15901 ctttgcagcg tttgccgtag tcgggcggcg gggtttgtcc gctgtttaag agttcgcgga
    15961 cggcggctat agttgcgagg gtttgggcgc gtaggccgag acctttgcaa aaatagtctg
    16021 ttaacgaaat ttgacgcata aaaatgcgcc aaaaaatttt caattgccta aaaccttcct
    16081 aatattgagc aaaaagtagg aaaaatcaga aaagttttgc attttgaaaa tgagattgag
    16141 cataaaattt tagtaaccta tgttattgca aaggtctcag gccgtctgaa aacacgacgg
    16201 ggacacggtg gcgggtttgc atataccaca gcgcgccctc agagacggtt tgccccgtca
    16261 tttcttccaa gcacaagcct tgggcgcaaa gctggatttc atcccccggg tcaggtttgg
    16321 gcttgcctcg tttgtattcc acaggtttca gacggcctgt ttttgtatcc gcttccacca
    16381 aatccaatat gccgctgatg cccggttttt ccgccaaaac atgcactgtc cactcaaagc
    16441 gcacgccctt gcacgtttcc ggatcgcccg aatctttgcc gcaatgatat tgcacgcaat
    16501 cggcatggga ctttgctccg acacccgata ctgcgcccga cgcaacagca cattgccgtt
    16561 ctgccgcccc tgaagccgtc ccaaataaca cccgttttcg gtaaaaaacg ccaaattcac
    16621 attattttcg ccgcaaaacc ccaacagaaa cggcgacaca agcacattcc caaaacagaa
    16681 aatatgcccg atggaatgca ccggtaactg cgccaccttc ttacgctcct gctccaccac
    16741 cagtgtctcc cgctccttat gcagatagct gccttgggtg gtgatgtaga gtgtgttttg
    16801 cagtttgcgc atgggaaaac tccttaggtt ttgaccgtgc ttttggggtt aaacgagggg
    16861 ctagctaaaa attagatttt atcttctgcc ggatcaactt tataccaatg ctcacgattt
    16921 cttttacact ctaatgctgg tgtagttctt gttacccttc ttttcttgct accatcagaa
    16981 taacgtatat tctcccactc gattggctta ttataatatt tcatttctcc accgcactgt
    17041 ggacattgag aaatactaat tttctctaga cttaaacgat gccccatacc gctaatagca
    17101 taattaaaaa ct
//
LOCUS       DAXGCP010000046        17068 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.046, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000046 DAXGCP010000000
VERSION     DAXGCP010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17068
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.046"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..897)
                     /locus_tag="ACFJCW_001280"
     CDS             complement(<1..897)
                     /locus_tag="ACFJCW_001280"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC4151416.1"
                     /translation="MNHFKKQQIQNIADFNPREQLAKGALAKSVPMAMLKEFQRQITG
                     YEIKAFNGGAKFRNGDTLLAKITPCLENGKTAFVDILDDGEVAFGSTEFIVLRAKNET
                     NPEFLYYFAISPDFRKRAIECMEGTSGRQRVNENALKTLELPIPEPQIQQSIAAVLSA
                     LDKKIALNKQINARLEEMAKTLYDYWFVQFDFPDANGKPYKSSGGDMVFDETLKREIP
                     KGWGSIELQSCLAKIPNTTKILNKDIKDFGKYPVVDQSQDFICGFTNDEKSILNPQDA
                     HIIFGDHTRIVKLVNFQYARGAD"
     gene            complement(947..1177)
                     /locus_tag="ACFJCW_001281"
                     /pseudo
     CDS             complement(947..1177)
                     /locus_tag="ACFJCW_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004143539.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
     gene            complement(1227..4231)
                     /locus_tag="ACFJCW_001282"
                     /pseudo
     CDS             complement(1227..4231)
                     /locus_tag="ACFJCW_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232507.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
     gene            complement(4351..5661)
                     /locus_tag="ACFJCW_001283"
     CDS             complement(4351..5661)
                     /locus_tag="ACFJCW_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HFC4151417.1"
                     /translation="MTDLFVREPDAPLAERLRPHTLDDVIGQQHLIGEGKPLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPHVESGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYRDFTIEADVQELLVNTADGDARRLLNLLEQLLRAADTR
                     RLKILTTEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRAFQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDGLDEPDFYQPVPRGLEIKIGEKLAWLKSLDEEALKAK"
     gene            5858..6159
                     /locus_tag="ACFJCW_001284"
                     /pseudo
     CDS             5858..6159
                     /locus_tag="ACFJCW_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714068.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6839..9583
                     /locus_tag="ACFJCW_001285"
     CDS             6839..9583
                     /locus_tag="ACFJCW_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC4151418.1"
                     /translation="MPGKKNTPIIRQNHTGWGVQSTIDSDVVLSAANNIVEVGGSPMN
                     QEGITAHGNATITLKAKENNKITVENAAYSSDGISTLINRTGARPGTRDDGNKIILEA
                     GGDNIVTMKSGDADADYVNNSKVLTETPYYKSKRGSNGIFAYGDKSLVKLIGENNIVK
                     SEISEKSKALNGGFRHIGIYSWQNAKVELSAKSDNIVQGGIWGLYSNNSSISLKGKNN
                     VISNPKYNVFAYKKAKVDLTVENKNTLSDAEFGVYALNTSMVNLSSKDNNEVKSTQVG
                     LYSQDGGSINVDRKDNIIEGDAVALVGKGGSQNIRASRTNLISSKSLGIHAEQAAKIA
                     ITGASNTIHASNAAIRSLDKSEVKIDGQITIDSNVANLARQDGSIHLNYKDDTRITGA
                     TVSDKGLVAIKPLNNTNIVADTIHYKGDVLAVNKGKVELDFTPNILLAGRLDNFSGLT
                     DSKHKNLFENYVANLDSKSAGEINFNLAKDALWTMTGQSWLDKLEGQGTIDFNNDAKT
                     SGRALHIGELAGANKFLMHLNKDGIHSDMLYVKKGTSTPQEVVVKNLSEVLDSMNYGE
                     RLRFATVTNSKNEFVNGKKYIDDTHLMEDALTVEYSAHNGDKNNKDDYNKSFNGSEMT
                     AEKAGDDYVNKTYTDNRQNVYLVKQATGNPSRNVKNINDMFDSTAHYAFTLDTYAKRE
                     GERAFSTLDKKEGDWIRLTHTRVIQSNAFRFHNNDFEIGYDRFSLNEQEKKRKWGISL
                     DYGHGRTSLWNTFGKDKIRKYELALYNTTQYIDKEGDETGYIDNVLKIGKLRNRVIAR
                     NHMGQLWGKGKYSNTLFSISTEYGRRKFLDDDKLWRITPQVQLQYSYLRGTGYRIDNG
                     INVNLSHANSLIGRLGLDVVRKFDGGKKLFYIKGNIFHEFLGSRSFKAFEGKSHYAQK
                     "
     gene            9900..10094
                     /locus_tag="ACFJCW_001286"
                     /pseudo
     CDS             9900..10094
                     /locus_tag="ACFJCW_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_063514830.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(10115..11031)
                     /locus_tag="ACFJCW_001287"
                     /pseudo
     CDS             complement(10115..11031)
                     /locus_tag="ACFJCW_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            11286..12750
                     /locus_tag="ACFJCW_001288"
                     /pseudo
     CDS             11286..12750
                     /locus_tag="ACFJCW_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
     gene            13001..13369
                     /locus_tag="ACFJCW_001289"
     CDS             13001..13369
                     /locus_tag="ACFJCW_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151419.1"
                     /translation="MNKTLSILPAAILLGGCAAGGNTFGSLDGGTGMGGRIVKMTVES
                     QCRAELDRRSEWRLTALAMSAEKQAEWENKICGCATEEAPNQLTGNDVMHMLNQSTRN
                     QAITTVTAKTVSACFKRLYR"
     gene            13442..14851
                     /gene="thrC"
                     /locus_tag="ACFJCW_001290"
     CDS             13442..14851
                     /gene="thrC"
                     /locus_tag="ACFJCW_001290"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HFC4151420.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGLAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEFVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALDKVGGKYGFTSGKSTHADRLATIKQVYEQDQELIDPH
                     TADGVKVARKVREEGETVVCLETALAAKFDATIREAVGDVAIPRPAALEGLENLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            14898..15692
                     /locus_tag="ACFJCW_001291"
     CDS             14898..15692
                     /locus_tag="ACFJCW_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151421.1"
                     /translation="MTLPMQETRFSILLDELAAKQEATIAPYLLADGTKVWVRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRSVGIAVPELLALRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKRQFLSQAFARNMMWDG
                     KNISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSDQP
                     AEIQKLIAGTVKPILPIRRLEHPRWGRDALRLAASISLISLADMPP"
     gene            15880..16656
                     /locus_tag="ACFJCW_001292"
     CDS             15880..16656
                     /locus_tag="ACFJCW_001292"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC4151422.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCIRDESLRFENGQFVMVGLMA
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDEVLISKKPTGTLVAC
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHRGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
BASE COUNT         4377 a         3927 c         4378 g         4386 t
ORIGIN      
        1 atctgctccc cgcgcatatt gaaaattaac taacttaaca attcttgtat gatcaccaaa
       61 aataatatga gcatcttgtg ggtttaatat agatttttca tcattggtaa atccacaaat
      121 aaaatcttga ctttggtcaa caacaggata ttttccaaaa tccttaatat ctttatttaa
      181 tatttttgta gtatttggga tttttgctaa gcaagattgt aattctatac ttccccaccc
      241 cttcggaatt tcccgtttca aggtttcgtc aaacaccatg tcgccgcctg aggatttgta
      301 gggcttgccg ttggcgtcgg ggaaatcgaa ctgcacaaac cagtagtcgt acagggtttt
      361 cgccatctct tccaggcgcg cgttgatttg tttgttcagg gcgatttttt tgtccaaagc
      421 ggataggacg gcggcgatgg attgttggat ttgaggttct ggaataggca actccagtgt
      481 ttttaatgca ttttcattga cacgttgcct gccggaagtt ccttccatac attcaatcgc
      541 tcgttttcta aaatcgggac tgattgcaaa ataatagaga aattcgggat tggtttcatt
      601 ttttgctctt aacacgataa attcggtaga accgaaagcc acttctccat catctaaaat
      661 atctacaaaa gcggttttcc cattttccaa acacggggta atcttagcta ataaggtatc
      721 accattgcga aacttagctc caccgttaaa tgccttgatt tcgtaacccg taatttgtcg
      781 ttgaaattct ttcaacattg ccatcggaac actttttgcc aatgctccct tggctagttg
      841 ctctctcgga ttaaaatcag caatattttg aatttgttgt ttcttaaaat gattcatgat
      901 gttccgttac aaaactcttc aaaggccgtc tgaaaaaaac atttcatcgg tagttcttgc
      961 cgtctgcggc agttgtaaac tgaaagttta caactgaatc gtccagttct tgttctgcaa
     1021 atatggcttt gatgtgttta ccgatgtttt gtttgctggt ttggtagagt tcggcaattt
     1081 ctttttgggt aagccatagt tcgccgtcaa gctcgcgcag ggtaaattcg gatagtccgt
     1141 cttccgtggt gtagatgatg atgtcgttgt tgtgcatagc tttcctgtat ttataaatgg
     1201 ttaaggctac ctaaaaaacc tctttctcaa atccgcccgc tttcttttaa atattcccgc
     1261 accaacaggc ggttgatggc ttggatgtct gcaggctgaa caggaaattg ctgttccgtt
     1321 ctaaagcgtt ttaatacgat gccctgcatt tgtttttcaa agtaattttg gttgtccaaa
     1381 atctgctcca tatccagcac tttttggtcg gcatcggttt ttacaccgct tagcgcgtta
     1441 aagactttga gtttgtctcc gtagagggcg gcgttttcca tcaaccgctt gtggatacgt
     1501 gcgtatttgg cgtcgccgcc gtatttgtgc cgtaagaggt cgttttggcg gttcagctct
     1561 ttgattttgg catagacggt ttcgagtgtg gcgatgtttg tctgcatttc ttcttgcccg
     1621 acttcggcga ggttcttttt cttgaagatg cgttccagct cttcgcgcag gctgatgtat
     1681 tcaaggtcgt cttggtcgaa gttgcccgcc agcccttcgc gcactttgcg catgatgtct
     1741 tttaaatcgt cggcaagttt gagttccgcc tcgccgattt tgacgaattg aaagtaaacg
     1801 tcttccagcg cttcattgag caaatgggcg gtgtcgcctt gctgtaattt ttcggcaagg
     1861 tttaaggtat ccaagcgggc ggcggtttcg cggtacaaaa gattgagctt gtcaaaatcc
     1921 agatgcgcaa gaaattcgtg gctgccttgc aggcgcagga tgttgtacaa ctctttggcg
     1981 gtttgcaggg ctttttttaa ggctagaagc tgttttttgt cttctatttg gctaatttgg
     2041 ctgcaaaatt cttcggcgtt ttcggtatcg aaatcaaaca gggcgttttt aatgtctgca
     2101 atttcctgtt cgatttcttc ggcggttttg aatagctggc tgtaactgcc gatttcgtcg
     2161 cccaattcgt tggaaagttc gtcccaatag gcgcggttgg ttttgtcaaa ttcgcgttcg
     2221 atatcggcaa aatcgacgac atagccgtag cggtaagatt tgtaggtgcg gttgacgcgg
     2281 gtcagggttt gtaaaaggtt atgggctttt atcagtctgc ccaaatagag ctttttcagg
     2341 cgcggcgcgt caaagccggt caaaagcatg ttgtacacaa acaagatgtc ggttttgccc
     2401 gctttgaaat ctttaaccca ttggtcgcgt tcttccttag tgccgacgtc gtgcaatatc
     2461 aacgcggcgg tgaaattgtg gtctgaggcc gtctgaaaat gctcaaaaag ctggcgtgcc
     2521 tgttctgcgc tgtcgcaaac gaccatggca ccgaggctct cgtcttggtt ggtttttctg
     2581 aatttggcga agtcgtccaa gatgtagtca agcatcgggt ggacgaagtg cggatgggcg
     2641 tagatttctt tgcggtcaaa gctgcctttt tcgatttcaa gttgcgccag tgcttcttgt
     2701 aattgcgcct tgtatcggct gccgatttct tcgcgtatca ggcgcagggt gtagccgtcg
     2761 gcaatggagg cgttgtaata gtatttgtgg atgtagtcgc cgaagagttc gcgggtgttg
     2821 acgttgcctg cggttacgcc gataagcggc gtgccggtca gcccgatttt gacggcgttt
     2881 acgtcggact gattaaggtt ggcaagaaat gagcctttgg ggttgtagct gcggtgtact
     2941 tcgtcgagaa aatagacgcg ccggatggcg aggtcgtagt cgttacgggc gacaacacgg
     3001 gggcgtcttt gaatttttgg atgttgacga cggtgatttc cggtttgcct gcgtggttgt
     3061 gcagggtttg ggcggatttg atgtcggcaa cgaaggcttc gcggctgtcg atggtatgga
     3121 cgattaagtc gcgggcggta aattcccgct gcgcctgttt caataaatcg agcctgtcca
     3181 cgatgaaata gaatttcggc acgataccct gtttggcgta atagtgggtc aggtaacggg
     3241 tgttgtaata ggcaggcgcg gttttccccg atccttgggt atgccaaatc acgccttttt
     3301 taccgccgtt cgataaatgt ttttcaatgg caagggtggc aaacagttgc ggataacgca
     3361 tgatgtgttt ttgcaccgaa ccttgacttg ctttgacgta agtcagcccg tgttgcagga
     3421 gaaaggcaag acgttcgcgg caaagcagcg aagtcaggat gcggttggtc ggcgtatcgg
     3481 gcgatttatt gctgataaat tcggggctgt gtttgataac gggcagatta ttgtcttgta
     3541 gaacgttgtt ttcaaggtcg tctgaaagcg tgtccaataa ttcggtaagg tttaatttat
     3601 gctcttcgcg gaagtagttg aatacgggct tgccgcaagc agacgaggcg taaaacgcgc
     3661 cttgtgccgg ctcggttgcg ccgtcgtcgt attccatgtt gttggaaaaa atcatgaatt
     3721 gggtgatgtt gataaaacgg cggaatttgg gatttttcgc acgtttgccc atgcgctccc
     3781 gctcttcgcc gatgccgcct ttattgttgg gctttttgac ttcgataaag accaaaggca
     3841 tgccgtttac cagcagggca atgtcggggc ggaatgcttc gtcgccgttg atacaaggca
     3901 actcagttac aacgtggaaa ctgttgttgt caaaattttg gaaatcgatc agcttcttac
     3961 cgccggattg attggtgagg cgttcgtaaa atttttgccc caaatcttcg ttatccagct
     4021 ctaagcgtat gtcggcaagc aggcggcgtg catcatccgg cggcaaatcg ggattgatgc
     4081 ggcagaggct gtctacaaag atttcgggaa agatattggt ttgtctgtcc caatttgcat
     4141 tttttagcga aagataatca tagcccaagc gcatcaggtg caaaacggcg gggattttga
     4201 cgcgggaatt ttcgttgtgg gtttgggaca taaacgtaac gtaatgggtc atcaaaattt
     4261 attgaaacgg attataacac ctgaaaaaag ccgatacgcc ttttcggtgt accggctttg
     4321 ccatactgtt ctgcttcaga cgacatcgct tcattttgcc tttaatgcct cttcgtccag
     4381 cgatttcaac catgccagct tttcgccgat tttgatttcc agcccgcgcg ggacgggttg
     4441 gtaaaagtcc ggttcgtcca agccgtcggg catataactt tcgccggcgg cgtaggcgtt
     4501 cggttcgtcg tgggcgtagc ggtattcgcg tccgtagccc aattccttca tcagcttggt
     4561 cggggcgttg cgcaggtgga cgggcacttc gtcgctggcg ttttctttga cgaagcggcg
     4621 catttggttg tatgccttgt agcccgcgtt ggatttggcg gcggcggcaa ggtacagcac
     4681 ggcttgcgcc agcgcgagtt cgccttcggg cgagcctaag cgttcaaagg tggcggcggc
     4741 atcgttggcg atttggaagg cgcgcgggtc ggcaagcccg atgtcttccc aagcgatacg
     4801 cacgatgcgg cgggcgagat agcgcgggtc ggtgccgccg tcgagcatac ggcaaaacca
     4861 atacagcgcg gcgttcggat gcgaaccgcg cacggatttg tgcagggcgg agatttggtt
     4921 gtagaaactc tcgccgcctt tgtcgaaacg gcggatttgc gcgcccaagc tgtcggcgag
     4981 aaattcggtg gtcaggattt tcagacggcg cgtgtcggcg gcacgtaaaa gttgttccaa
     5041 caaattcaat aatctgcgcg catcaccgtc ggcggtattg acgagcagct cttgcacatc
     5101 ggcttcaatc gtgaaatccc ggtattcggg caaagccaac actttggcaa tcagtttctt
     5161 gaggtcgtct gaagacaagg attgcaaaac atatacctgc gcgcggctca gcagcgcggg
     5221 attgacttca aacgacggat tttccgtcgt tgcgccgata aaggtcagca aaccgctttc
     5281 gacatgcggc aaaaacgcgt cctgctgcgc cttgttgaag cggtggactt catcgacaaa
     5341 caaaatcgtc gcgcgtccct gctgcaaagc gatttcagcc ttatcgattg ccccgcggat
     5401 gtccttcacg ccggaaaaca cggcggaaac aggcaaaaac tgggcattga aactctgcgc
     5461 caaaatccgc gccaacgttg tcttgcccac gcccggcggc ccccacagca acatagaatg
     5521 cggcttcccg ccttccaccg ccacgcgcag cggcttgcct tcgccgatta aatgctgctg
     5581 cccgataaca tcatcaagcg tatgcgggcg cagacgttcg gcaagcggtg cgtcgggttc
     5641 tcggacaaac aaatcggtca taacggctcc gtcaacaggt tttcagacaa tatgattata
     5701 cggcagggaa aggcggcgtg ccgcatacgg ataccgcccc accgtttgta ctaagccgat
     5761 cttaggcgta caattgggaa atttcaggaa atttatacgc tatgccatcc atgcagcttt
     5821 gcaaccggac ccgcaaagac caggtcccgt tttaaccatg cggggaagtt aagattacag
     5881 taaacaaaac tattttgcct tattggaaga aaggggaaca gttatgagaa attggaactt
     5941 attaccaccg gggaaggggc agatggagac ttactggtca acggttctta cggcatccgt
     6001 tcttttgcag acctaaaatt ggaatacaaa cccgaattat cggtgagaag caatcatgac
     6061 attattttca acaatgattt tcaatctgtt gacgtacaac cctattccgg aaatatccat
     6121 ttggatgcca aaggaaaaat tcaatttaat ttgaatgttg ccgataaggt aacagatcca
     6181 accacacatc aagaaaagtt agtgaacgat aacgctttag tgcggtatgt caacaatatc
     6241 accccctccg atgaaaatga caaaggcagc atatccttcc attcaaaaac aggcaatttg
     6301 ttcaatatga acgttaacgt tcataaaggc acacaccatt tcggtattca caacctccgc
     6361 aataccaatg ttaatctgac tgccgaagac ggcgataatg tggttgcgat taaagggaag
     6421 cttgccgagc ctatgccggc aggaaaagtt gagagtacaa gttttttaag gggtattgaa
     6481 acggctttta aatccaatac cgtattaacg gggaataaca ataaaatatc catcaccact
     6541 gagggcgacg gcttgggatt gggcgtaaat ggcctccagt ccaactcccc ctattccgga
     6601 cacacgacgg gtactttcat caataatcaa ccaagcaata ctacccaacc ttcccttgac
     6661 ggcaccagca ccatcgaact caaagccgtc aaggggaata atgaagttga tttaaatgta
     6721 aaaaaccacg cctccgtaaa aggcattatc acgtcgcatt ctgcaaaagc aacgcttgaa
     6781 gccgaggagg ataatattgt ccgggttaaa aatccggaca ccaagacggc tttaatcaat
     6841 gcctggaaag aaaaataccc caataattcg ccagaaccat acagggtggg gggttcaatc
     6901 cacgattgac agcgatgtag ttttgagtgc ggcaaacaat atcgttgaag taggaggcag
     6961 cccgatgaac caagaaggga ttaccgctca cggaaatgcc acgattaccc tcaaggcgaa
     7021 agaaaacaat aaaattaccg tggaaaacgc cgcatacagc agcgacggca tttcgactct
     7081 gattaacaga acgggggcaa gacccggaac aagggatgat ggaaataaaa tcatactgga
     7141 agccggcggc gataatattg ttaccatgaa atccggcgat gcggatgcgg attatgtaaa
     7201 caattccaaa gtattaacgg agacaccata ttataaaagc aaacgaggtt ccaacggcat
     7261 ttttgcctat ggcgacaaat cgctggtcaa actgattggc gagaataata tcgttaagag
     7321 tgaaatcagt gaaaaatcta aggcattaaa tgggggattt cgccatatcg gcatttattc
     7381 atggcaaaac gcgaaagtcg aattgtctgc gaagagcgac aatatcgtac aaggcggaat
     7441 ttggggctta tactccaaca actcctcaat ttccctcaag gggaaaaata atgtgatttc
     7501 aaacccgaaa tataatgttt tcgcctacaa aaaggcaaag gtggatttga ctgtcgaaaa
     7561 taaaaacaca ttatctgatg cggaatttgg cgtatatgcc ttaaacacaa gtatggttaa
     7621 tttgtcttca aaagataata acgaggtaaa aagcacccaa gtgggtctgt attcgcaaga
     7681 cggcggttca atcaatgtag ataggaagga taatattatt gaaggcgacg cggttgcctt
     7741 ggtgggaaaa ggtggaagtc aaaacattcg ggcaagccgt acaaacctga ttagttcaaa
     7801 aagcttagga attcatgctg aacaagctgc aaaaatagcc ataaccggcg caagcaatac
     7861 aattcatgca agcaatgccg ctattcgttc attagacaaa agcgaagtta agattgacgg
     7921 tcaaattacc attgactcca acgttgccaa tcttgcaagg caagatggtt caattcattt
     7981 gaattataaa gacgataccc gtatcacagg ggcaaccgta tctgataagg gtttggtagc
     8041 catcaaacct ttgaataaca cgaatattgt tgccgacact attcactata aaggcgatgt
     8101 cttggcggta aataagggta aagtggaatt agatttcacg ccgaacatcc ttttagcggg
     8161 acgtttggat aattttagcg gcttaaccga ttccaaacat aaaaatttat tcgaaaacta
     8221 tgttgcaaat ttagacagca aaagtgcggg cgaaattaac tttaatttag ccaaagacgc
     8281 attatggacg atgacaggtc aaagctggct ggataaattg gaaggacaag gcactatcga
     8341 ttttaataat gatgctaaaa caagtggacg cgccttacat atcggcgaat tggcgggtgc
     8401 caataaattc ttgatgcatc tgaataaaga cggcattcac agcgatatgc tctatgtgaa
     8461 aaaaggcact tcgacaccgc aagaagtcgt cgtcaaaaat ctgtccgaag tgctcgacag
     8521 tatgaattac ggcgaacgtt tgcgtttcgc tacagtaaca aactcaaaaa atgaatttgt
     8581 gaacggtaaa aaatatattg acgatacgca ccttatggag gatgccctga ctgtcgaata
     8641 ctccgcacat aacggcgata aaaacaacaa ggatgactat aataaatcct ttaacggctc
     8701 tgaaatgacg gcggaaaaag ctggagacga ttatgtcaat aaaacctata ccgacaacag
     8761 gcaaaatgtc tatttggtca aacaggctac cggcaatccg agccgaaatg tcaaaaatat
     8821 caatgatatg ttcgattcaa ccgcacatta tgcgttcact ttggatactt atgccaaacg
     8881 cgaaggggag cgggcttttt caacgttgga taaaaaagaa ggcgattgga taaggctgac
     8941 gcatacccgt gtgattcaat ccaatgcgtt taggtttcat aacaacgatt ttgaaatcgg
     9001 atatgaccga ttcagcctca acgagcagga gaaaaaacgc aaatggggca taagtctcga
     9061 ctacggccac ggcaggacat cattatggaa tacgtttggc aaggacaaaa tcaggaaata
     9121 tgaattggct ctgtacaata ctacccaata catagataaa gaaggagacg aaacagggta
     9181 tatcgacaat gtattaaaaa taggaaaact gcgtaaccgt gtgattgcac gaaatcatat
     9241 ggggcaatta tggggcaagg gaaaatatag caacacccta ttctctatca gcaccgaata
     9301 cggccgccgt aaatttttgg atgacgataa attgtggcgg attacaccgc aagtacagtt
     9361 gcaatattcc tatttgagag gtaccggcta tcggatcgat aacggcataa acgtcaattt
     9421 aagccacgca aacagcctga taggccgctt gggtttggat gtcgtgagaa aatttgacgg
     9481 aggcaaaaaa cttttctata tcaaaggcaa tatctttcat gaatttttgg gcagtcgttc
     9541 ctttaaggca tttgagggca aaagtcatta tgctcaaaaa tgaaatacga gggggacttg
     9601 gtattccgcc ggattgggct acaatgcgcg gacaggcaaa aaaaaaaaac gaatgtcttt
     9661 gccgatgcgg aaaaaagagt tttccggcgg gaaaaaagga tcgtacaaca tccgcttatc
     9721 cgtttcccat cagtttggct gaatgatatc ggggccgcgc cattattcgg caggccccat
     9781 tttattgcca cacattgcct gcccgattcc cgtttcaaca gcaaaccctt ccaatatttt
     9841 gttcaaactt ggatcgcggc agatgggggc gtgcaagccc cgcaaggttt ttttggcttt
     9901 tacggaacag cacgcatttc gccaaacggc aaaattgcat taacggaatt gaaaactttt
     9961 ggaattgtgc aaaacggcat ttgcgtcagt ttaacggcat ttccaaaggg cattttaagc
    10021 cgtattcgag agaatgcgga tggcgttttc agtgttttca gcgtgataaa attcaaattt
    10081 ctattctaaa acaatcagca aagcaggatt tatttcagtt gtccgagaca acgggcggct
    10141 gcaccgcctg cactccccat actttttcaa cgcactcgag caggagtgag acgtggggat
    10201 tatcctcgta ttcttccgca taaatgaaat tgagcggcat actgtggcgg cacgattcga
    10261 taatagccac gcccgcgcct tcttttgccg ccgcttcggc tttgtttccc tgcaccattg
    10321 ccacacctat accgcctgca accaaatcga taagggtttg ggggtagtcg cacaatatct
    10381 gtttttttgg gtgagagccg gttgctgcgc caaaactggt gcaggtgctt cctacttccg
    10441 gacacgcccg acatttctat ccatacgcat tcttgcaggc tctgcggaag ggagcgggtc
    10501 agccgggaat attggctttg cgggcaaatc agcgcgtagg tcaggttttg caggaatacg
    10561 ctgcggatgc cgcgttgggc ggcgttgccg agtataaagc cgccgtgcag ggttttgtgt
    10621 tggatgcgcg agaggatttc gccgctcatt ccgtattgga tgtgcaggcg cgttttgggg
    10681 ggctgtttga ccgatattgt ccgtcagcgc gacgagtttt gccgaatcga tggggtggat
    10741 aatgcccaaa ctggtctctt ccgaataatc gcctgccagc gttttggcaa aatactccaa
    10801 cttgtgtttg tattgcagca gggattccgc ttcgggcaac agtatttcgc ccgcccgcgt
    10861 caataccatg cctttccccg tgctcctgaa cagcggcgtg ccgacatatt cttcaagggc
    10921 tttaatttgg gcggaaacgg cgggctggga aaggaaaagt cgtttggcgg tttgggtaag
    10981 gttgccctcg tgcgcgacgg cgacaaatga ttttaattgt acggcatcca tgtatccctc
    11041 cttgtgcgga tgttttctat atttgtgcaa tcgaaatctt ttaggcggat tgttgctgaa
    11101 aattaacttt ttaatcaagt ggtttgtaaa ttgtatcagt tttccggatg atgattatta
    11161 aaaaaaaatt ggttttattg cctgtttggg ctttaaatgg ggttacggct tccgaacgca
    11221 gcccgtatca aaaagaaaag tcatgcgccc ccttttacga ggcgcgatat ataaggagga
    11281 aggttatgga aaaacataat gggacttatc gggatttaca ccgtccggct tcggaatttg
    11341 cgacgcggga cgaatatttg gaacatgaat tgcagattat gcaaccaaaa cgctggcggc
    11401 ccaacctgcc ctttcgcgat taccgcttcg agtgggagga tttgattcct gcgatggcgg
    11461 gaacgattgg aaaagtggtg atggtggggg ggcggcggcg tttgccgcac ctttggggct
    11521 gcctgacagc tttgtactgg aaaatgtgcg ctatgagctt ttaatcgccg ccgcgtttat
    11581 cttattggta tcgggctttt ttctgcccgg cgccaacctg cccggtacgc acgggccgct
    11641 gattccgatg attcccatcg ttgtgtcggc aggcgggcat cctttggcgt tcggcatttc
    11701 gattgcggtt ttaggtctgc tgatggcttt atttcgcggc ggcagtatta tggcgaagct
    11761 gacaagcaac ggcgtatgcg gcggattatt actctatttg ggctttatcg gcacgacggg
    11821 gcaggtaaaa aaattgtttt cgtgggcagg cggttttaat atgccctaca tcgcttttac
    11881 cgtcattatt gtaacgattg tgatgtacgc tttgttggag cattggaaaa aacgctggtt
    11941 ggccgtgcct ttgggatgct tgattgccgg tgtggcggca tttgcattgg gtgcgccgtt
    12001 tgagtttcac accgcccccg gcctgcctcc aatgagtcct gcttattggt agggtgaaaa
    12061 cagcggctgg catctggggt tgccgacggc agaaagtttt ttggttgtct ttccatttgc
    12121 ggtattggct gttgcaatgt ggtcgcccga ttttttagga catcaagtgt tccaaaaaat
    12181 cagctatccg gaaaaaaccg ataaggtatt gatgaatata gacgacacca tgacaagttg
    12241 ttctgtccgt caagcagtgg gttctatttt agggggtgca aattttacct cttcttgggg
    12301 aacttatatc gtgccggcat cgattgccaa acgccccatt ccgggcggtg cggttttaac
    12361 ggcggtttta tgtattatcg ccgggttgtg gggctatccg atggacttgg cgatttggca
    12421 gccggtattg agcgtagcct tgatcgtagg cgtatgctta ccgcttttgg aagcgggcat
    12481 ggaaatgacg cgcaaaggca aaaccaccca atccgccgcc atcgtggtgt tctcttccgt
    12541 ctggtcaatc cggttttcgg ctgggcgttg acgatgctgt tggataattt gggcttaatc
    12601 ggctgcaaag aacgcagcgc gcaattaggt tttgtcggac gagtattgat acccgcagta
    12661 ggtttcttaa tcttgtgtgt ggcgatgggt gcggtcggga tgctgcccgg tatccctccg
    12721 tttttggagc agttcaaatc tttgggctag gctgaaatcg caaatgccgt ctgaaccggt
    12781 ttcagacggc atttttgcaa acaggcaaaa tgacggcggc gggatttttt attttcccga
    12841 ttgaagtata atgttgccgg gcttcaaccg gatattcaaa cggtttgctc caacactcgg
    12901 aacggcgcat aaaacgccgc ccttcgcgtt atcccgaacg gggcggctaa tcagatccta
    12961 tcgccataaa aggcggggtt tcaaccgaaa aggaattgag atgaataaaa ccttgtctat
    13021 tttgccggcg gcaatcttac tcggcgggtg cgccgccggc ggcaacacat tcggcagctt
    13081 agacggcggc acgggtatgg gtggcagaat cgtcaaaatg acggtagaaa gccaatgccg
    13141 tgcggaattg gacaggcgca gcgaatggcg tttgaccgcg ctggcgatga gtgccgaaaa
    13201 acaggcggaa tgggaaaaca agatttgcgg ctgcgctacc gaagaagcac ccaaccagct
    13261 gaccggcaac gatgtgatgc atatgctgaa ccagtccacg cgcaatcagg caattaccac
    13321 cgttactgcc aaaacggttt ccgcctgctt caaacgcctg taccgctaac cttcttcaga
    13381 cggcatgagg cagatgccgt ctgaatccgt tttcctgcaa tttcgacaga cgagaaaaat
    13441 catgaaatac atcagcacgc gcggcgaaac cgcacacaaa ccgttcagcg aagttttatt
    13501 gatggggctt gcacccgacg gcggtctgat gctgccggaa cattatccgc aaatcgggcg
    13561 cgaaaccttg gacaaatggc gcggtttggc ttatcccgaa ttggcgtttg aaatcatgcg
    13621 cctgttcgtt accgatattc cggaggacga tttgcgcgat attctgaacc gtacttacac
    13681 ggaagcggcg ttcggtacta aggaaattac ccccgtccgc acgctttcag acggcatcaa
    13741 aatccaagcc ttatccaacg gcccgacgct ggcgttcaaa gatatggcga tgcagttttt
    13801 gggcaatgcg tttgaatttg ttttaaacaa agaaggcaaa aaactcaata tcttgggcgc
    13861 aaccagcggc gatacgggtt cggctgcgga atatgccttg cgcggtaaaa agggcgtgaa
    13921 cgtatttatg ttgtcgcccg acggtaaaat gagcgcgttt caacgcgcgc agatgtacag
    13981 cctgcaagac gggaatatcc acaatatcgc cgtaaagggg atgtttgacg actgtcagga
    14041 cattgtgaag gcagtgcaaa acgatgccgc gttcaaggaa aaataccata tcggtacagt
    14101 caactcgatt aactggggac gcatcgtcgc gcaagtggtt tattactttg cgggttattt
    14161 caaagcgacg caaagcaatg acgagcaggt cagcttctgc gtgccgagcg gcaacttcgg
    14221 caatgtttgc gcgggacaca tcgccaaaca aatgggcttg cccatccgcc gcctgattgt
    14281 cgcgaccaat gaaaacgatg tgttggacga gtttttcaaa accggcgcgt accgcccgcg
    14341 caacagcgcg catacttatg ttacctccag cccgtcgatg gacatttcca aagcgtccaa
    14401 cttcgagcgt ttcgtgttcg acctgatgga tcgcgatcct caggaaatca atacgctgtg
    14461 ggcggaagtg gctgcaggca aaggctttga cctgcgattt gccttggaca aagtcggtgg
    14521 caaatacggt tttacctccg gcaaatccac ccacgccgac cgcctcgcca ccatcaagca
    14581 ggtttacgag caagaccaag aactcatcga cccgcacact gccgacggcg taaaagtcgc
    14641 ccgcaaagtg cgcgaagaag gtgaaacggt ggtttgtttg gaaaccgcgt tggctgcgaa
    14701 attcgatgcg accatacgcg aagccgtcgg cgatgtcgcc attccgcgcc ccgccgcgct
    14761 ggaaggtttg gaaaacctgc cgcagcgcgt gcaaaccgtg ccgaacagtg cggatgcggt
    14821 aaaaggcatc atcgaacaaa cccttgcctg atgttccgta tgggcggcat tccatccgaa
    14881 cttaagattg aaagaaaatg accttaccta tgcaggaaac ccgtttttct atactgctgg
    14941 acgaattggc ggcaaaacag gaggcaacca tcgcccccta cctgcttgcc gacgggacca
    15001 aggtatgggt acgcaaagca ggcaggcaca atgcgcgatg gcgttacgcg ctgctcggta
    15061 tggttgcccg atatttgaaa ctgggggtgt tgaagccggt tcccagcctc ggcggcgagc
    15121 ctgccattgc aaccgaatca aaacgcctgt acgaattgcg ttcggtaggg atagccgttc
    15181 ccgaattgct cgccctccgg aaaaatgccc ttatgttcgg caatttggaa ggcatcccgc
    15241 tcgatacgca aatccgccaa gaagccgaag ccggaaaggc ggacgcttgg cttgccggtt
    15301 tggaagccat tgcacgcgtg cataaaaaac ggcagttcct cagtcaggcg tttgcacgaa
    15361 atatgatgtg ggacggaaaa aacatcagct ttttggattt tgaagacgac ccttccgagg
    15421 tcctgaccat agcgcaatgc caagcccgcg attggctctg ctacatccat tcgaccgcgc
    15481 tgatattgaa aaacggcgga ctgctggaag cggctgcgga aaaatggggc ggcgtattgt
    15541 cggatcagcc tgccgaaata caaaagctga ttgccggcac cgtcaaaccg atcctcccga
    15601 tacgcaggct ggaacacccc cgctggggac gggacgcgct caggctggca gcctcgattt
    15661 ccttaatttc cctcgccgat atgccgccgt aagccaccgc ccgccccacg atgccgtccg
    15721 aagcccttca gacggcatat aaccaacgcg catcaggcat tgtcgcaacc atccgtttcg
    15781 tttagaattt tgactttatc ccgaatcggg cagacatttc cactctgccg cacgtcccga
    15841 acaagcacta tccatttctt ttactgacag gaaacccaaa tggcagcatt caatacccaa
    15901 aaagtattgt ccgtacacca ctggacagac gcatatttta cctttacctg catccgcgac
    15961 gaatcgttgc gctttgaaaa cggacagttc gtcatggtcg ggctgatggc ggacggcaag
    16021 ccgctgatgc gcgcatacag cgtcgcctcc gccaactggg aagaacacct cgaatttttc
    16081 agcattaaag tccaagacgg cccgctgacc agccgcctgc aacacctcaa agtcggcgac
    16141 gaagtgttaa tcagcaaaaa accgaccgga actctagttg cctgcgatct gaatccgggc
    16201 aaacaccttt acctgttgag taccggtacc ggcatcgccc ctttcttgag catcaccaaa
    16261 gaccccgaaa tttacgaaca gtttgaaaaa atcatccttg tacacggcgt gcgctacaaa
    16321 aaggatttgg catactacga ccgctttacc aaagaattgc ccgaacacga atacctcggc
    16381 gacttggtta aagaaaaact gatttactac ccgattgttt cccgcgaaga attcgaacac
    16441 cgcggccgcc tgaccgacct gatggtaagc ggcaaactgt ttgaagacat cggcctgccc
    16501 aaaatcaacc cccaagacga ccgtgccatg ctgtgcggca gccctgcgat gctgaaagac
    16561 acctgcaaag ttttggacga tttcggtctg acagtctccc cgaaaaccgg cgtgcgcggc
    16621 gactacctga ttgagcgcgc gtttgtggat caataagctg cttgaaaatg ccgtctgaac
    16681 ggcatcagcg ataaaaaaac ccgaatcctg ccaatcagga ttcggggttt ttatagtggg
    16741 taaaaattag aaatgcacat ttccgtcatt ccaacacagg tgggaatccg gacttacctg
    16801 tttcattatc gtttgaaaat aaaagagaaa ccaaacatat agattcccgc ttgcgtggga
    16861 atgacgacgg tgttttgccg tagccaaagc aggaaaacat ccttattgtc atttcatcat
    16921 gataggacag taaggatgtt aaaaattaat tatcattata tgattgatat ataataaaaa
    16981 ttatcacaat aagaaaagtt atgcagaaaa taaaatgaaa aggatggttt tcattgaaaa
    17041 tggttgttct gccaccgtca tacacaga
//
LOCUS       DAXGCP010000047        16633 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.047, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000047 DAXGCP010000000
VERSION     DAXGCP010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16633)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16633)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16633
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.047"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(43..381)
                     /locus_tag="ACFJCW_001293"
     CDS             complement(43..381)
                     /locus_tag="ACFJCW_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HFC4151423.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERSDAAV"
     gene            532..4488
                     /gene="purL"
                     /locus_tag="ACFJCW_001294"
     CDS             532..4488
                     /gene="purL"
                     /locus_tag="ACFJCW_001294"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HFC4151424.1"
                     /translation="MSVVLPLRGVTALSDFRIEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPEAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDEQKQQWAALLHDRMTESVLPDFQTASKLFHHLKSET
                     FSTVDVLGGGKEALVKANTETGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIKGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQDYGKPEHISSPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDQNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFELREVPLEEHGLTPLQIWCNESQERYILSILEKDLDTFRAI
                     CERERCPFAVVGTATDDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPSKK
                     PFHAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQTPVADCAV
                     TMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCVGEAITNIAAVNIGDIGNIKLSANW
                     MAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGEEKKSVVSPLS
                     LIISAFAPVKDVRKTVTPELKNVEGSVLLFIDLGFGKARMGGSAFGQVYNNMSGDAPD
                     LDDAGRLKAFYSVIQQLVAEDKLLAYHDRSDGGLFATLAEMAFAARCGISADIDCLMD
                     KFLPIHLPDFQGDPAEDLSDELYNHAAIKILFNEELGAVIQIRQKDRDYVDAAFETAG
                     LTDAVSRIGSPDFDNEFISFFGYGYFLEQNRADLQRAWQETSHAIQRLRDNPACADSE
                     FALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQIEMAAAFTRA
                     GFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSILFHPALRDQFA
                     AFFADPNTLTLGVCNGCQMVSNLAEIIPGAETWPKFKRNLSEQFEARLNMVHVPKSAS
                     LILNEMQDSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQVTQTYPLNPNG
                     SPQGIAGITNADGRVTIMMPHPERVYRAAQMSRKPEGWTELSGWYRLFAGARKALG"
     gene            complement(4559..5704)
                     /locus_tag="ACFJCW_001295"
     CDS             complement(4559..5704)
                     /locus_tag="ACFJCW_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005246876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase/NADH oxidase family
                     protein"
                     /protein_id="HFC4151425.1"
                     /translation="MEEQLAQNDQPSEKLVRLYGAWAEGGAGVLVTGNVMVAESGKGS
                     INDVLISDDRALEMLKKWAKARTQNDTLLIMQINHAGKQSPAVVNKTPLAPSAVPLVG
                     MNGFINPPRELSADEINGLIQQFVQTAKIAEQAGFSGVQIYAVHGYLISQFLSPHHNR
                     RQDQWGGSLENRMRFLLETYTAIRAAAGKDFLVGVKLNSADFQKGGFDESESVQVVQK
                     LSEMGIDFIEVSGGNYESPQMLAAKDSTRKREAFFIDYAEKARAASQAPLIITGGFRS
                     QTAMEDALSSGHLDLVGIARPFALVPDLANKMQNRTYQTVQADRIQTGVAFVDKKAGA
                     MLEMNWYMTQMDLIGQGKQSNPKLSAWKVLLKTLRENGKAGLSTGRA"
     gene            complement(5843..6154)
                     /locus_tag="ACFJCW_001296"
     CDS             complement(5843..6154)
                     /locus_tag="ACFJCW_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HFC4151426.1"
                     /translation="MPQQTMNLMRECIPIFTVLSDENRHQILHVLWKHGRMNVNELTE
                     HLHLSRPAVSHHLKIMLQAGAVAVEQVGKERFYSIAMADAVARLKQLADLMAQNCPLS
                     K"
     gene            6386..7138
                     /gene="gloB"
                     /locus_tag="ACFJCW_001297"
     CDS             6386..7138
                     /gene="gloB"
                     /locus_tag="ACFJCW_001297"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HFC4151427.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTRFTFGNGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTVEQLYDSFQRFNQLPEGT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAERTPTLPVTLAHERRVNPFLRTEIP
                     AVRQRAEALVGKTLNSGLEVFAALRELKNAYR"
     gene            7372..8826
                     /gene="mgtE"
                     /locus_tag="ACFJCW_001298"
     CDS             7372..8826
                     /gene="mgtE"
                     /locus_tag="ACFJCW_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HFC4151428.1"
                     /translation="MSIEHTPPTHDGETGQNHAERPSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLAELHPADVADVLESLPPRERNIVWLLVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITIDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTDMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMVAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLSLATLFLL"
     gene            complement(8912..9820)
                     /gene="hslO"
                     /locus_tag="ACFJCW_001299"
     CDS             complement(8912..9820)
                     /gene="hslO"
                     /locus_tag="ACFJCW_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HFC4151429.1"
                     /translation="MNQTAINRADARTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRCALGELLAAGVLLSGNLKNEGTLIVQVQGQGKLKMLVAEATSDRTVRATARWDET
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGGSIAQMLVNYMKRSEQLDT
                     HIALSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFESSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            10065..10733
                     /locus_tag="ACFJCW_001300"
     CDS             10065..10733
                     /locus_tag="ACFJCW_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC4151430.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPVNRAPARRAGNADELIGNAMGLNEQPVLPVNRAPARRAGNADELIGSAMGLL
                     GIAYRYGGTSVSTGFDCSGFMQHIFKRAMGINLPRTSAEQARMGTPVARSELQPGDMV
                     FFRTLGGSRISHVGLYIGNNRFIHAPRTGKNIEITSLSHKYWSGKYAFARRVKKNDPS
                     RFLN"
     gene            10752..10970
                     /locus_tag="ACFJCW_001301"
     CDS             10752..10970
                     /locus_tag="ACFJCW_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151431.1"
                     /translation="MSMPEMPKWYGDDGQIVSCTEKVKVMAENMSELYQTAQDAFEDA
                     LLMGCGERQLRAYLLALIEGLENPYRKV"
     gene            11115..11459
                     /locus_tag="ACFJCW_001302"
     CDS             11115..11459
                     /locus_tag="ACFJCW_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HFC4151432.1"
                     /translation="MNTIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            11459..12151
                     /locus_tag="ACFJCW_001303"
     CDS             11459..12151
                     /locus_tag="ACFJCW_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HFC4151433.1"
                     /translation="MSEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILGIDYAVYHNAAQFIDFRLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLPLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            12218..13438
                     /gene="argJ"
                     /locus_tag="ACFJCW_001304"
     CDS             12218..13438
                     /gene="argJ"
                     /locus_tag="ACFJCW_001304"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HFC4151434.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALVINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDQHTVRATGIAKGSGMIHPNMATMLGFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTCDEARQAAYAAARSPLVKTAFFASDPNLGRLLAAIGYADVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKDEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            13498..14942
                     /locus_tag="ACFJCW_001305"
                     /pseudo
     CDS             13498..14942
                     /locus_tag="ACFJCW_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            15130..16521
                     /gene="hrpA"
                     /locus_tag="ACFJCW_001306"
     CDS             15130..16521
                     /gene="hrpA"
                     /locus_tag="ACFJCW_001306"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HFC4151435.1"
                     /translation="MFPDFSQTLSKDRHFLQSAFKNPNKYGGLSKIEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLEEIKKTVAENQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSRHFNGAPVLEVSGRTYPVEILYRPLTGKDEDDAEVELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKCRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHVEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEEDFNSRPEFTDPEIVRSNLAAVILRMASLNLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEVV"
BASE COUNT         3722 a         5040 c         4334 g         3537 t
ORIGIN      
        1 gccgtctgaa agcctttcag acggcatttc cattccaaat gctcaaaccg ccgcgtccga
       61 acgttcgccc gtgcggatac ggattgcctc ctcgaccggc agcacaaaaa tcttgccgtc
      121 gccgattttg cccgaacgcg ccacctcgac aatcacgtca atcgcgcgtt ccacggcatc
      181 atccgccaac accaactcga ttttgacctt gggcaggaaa tcgacggcgt attccgcacc
      241 gcgatagatt tccgtatgcc ccttctgcct gccgaaccct ttgacctcgc tgacggtcat
      301 gcccgtaatg ccgatttccg tcaacgcctc gcgcacgtcg tcgagcttga acggtttgac
      361 aatcgcctcg atttttttca taaaatttcc tttgaacaaa caatacaaac acatccgaaa
      421 aacgggaacc cccgtcagat tgtcaacatt ttaaaccaaa atacccaagc aatacagccc
      481 ccgttgcgca tataatgaca gcttttccaa ccgcatttga gagccgaatc catgtctgtt
      541 gttttgccct tgcgcggcgt taccgccctt tccgatttcc gtatcgaaaa actcttgcaa
      601 aaagccgccg cactcggcct gcccgaagtc aaattaagca gcgaattttg gtatttcgcc
      661 ggcagcgaga aagcacttga tgccgcgact gtcgaaaaac tgcaagcctt gttggcggcg
      721 caaagcgttg aacaaacgcc cgaagcgcgc gagggtttgc atttgttttt ggtaacgccc
      781 cgtttgggta cgatttcgcc gtgggcttcc aaggcgacca atatcgcgga aaactgcggt
      841 ttggcaggca tcgaacgcat cgagcgcggt atggcggtgt ggctggaagg tgcgcttacc
      901 gatgaacaga aacagcaatg ggcggcgttg ctgcacgacc gcatgaccga atccgtgctg
      961 cccgattttc agacggcatc caaattattc caccatctca aatccgaaac cttctccacc
     1021 gtcgatgttt tgggcggcgg taaagaggct ttggtcaaag ccaataccga aacgggtttg
     1081 gcactctccg ccgacgaaat cgattatctg gttgaaaact atcaggcttt gcagcgcaat
     1141 ccgtccgatg tggagctgat gatgttcgcg caggcaaaca gcgaacactg ccgccacaaa
     1201 atcttcaacg ccgatttcat cctcaacggc gaaaaacaac cgaaatccct gttcggcatg
     1261 atacgcgaca cgcacaacgc gcatcccgaa ggtacggtcg tcgcctataa agacaattcg
     1321 tccgtgatca aaggcgcgaa aatcgagcgt ttctatccga atgcagcgga aaaccaaggc
     1381 taccgtttcc acgaggaaga cacccacatc atcatgaaag tggaaacgca caaccacccg
     1441 accgccatcg cgccgtttgc gggcgcggca acaggcgcgg gcggcgaaat ccgcgacgaa
     1501 ggtgcgacgg gcaaaggttc gcgtccgaaa gcgggcttga ccggctttac cgtgtccaac
     1561 ctcaacatcc ccgacctcaa acagccgtgg gaacaagact acggcaagcc ggaacacatt
     1621 tcctcgccgt tggacatcat gattgaaggc ccgattggcg gtgcggcgtt caacaacgaa
     1681 ttcggccgcc cgaacctctt gggctacttc cgcacctttg aagaaaaatt tgacggtcag
     1741 gttcgcggct accacaaacc gattatgatt gccggcggtt tgggcagcat tcaggcgcag
     1801 cagacgcaca aagacgaaat ccccgaaggc gcactgctga tccaactggg cggcccgggc
     1861 atgctcatcg gcttgggcgg cggtgcggct tcttcgatgg ataccggtac aaatgatgcg
     1921 tctttggact tcaactccgt acaacgcggc aaccctgaaa tcgaacgccg cgcgcaggaa
     1981 gtcatcgacc gctgctggca gctcggcgac caaaacccga ttatctccat ccacgacgtg
     2041 ggcgcgggcg gcttgtccaa cgctttccct gaattggtca acgatgccgg acgcggcgcg
     2101 gtattcgagc tgcgcgaagt gccgttggaa gaacacggtt taacgccttt gcaaatctgg
     2161 tgtaacgaat cgcaagagcg ttatatcttg tcgattttgg aaaaagattt ggacaccttc
     2221 cgcgccatct gcgaacgcga acgctgcccg tttgccgtag tcggcacggc gaccgacgac
     2281 ggtcatttga aagtgcgcga cgatttgttc tccaacaacc ccgtcgattt gccgctgaac
     2341 gtcttgctcg gcaaaccgcc caaaaccacg cgtaccgaca aaacggttac gccgtccaaa
     2401 aaaccgtttc acgcgggcga tatcgacatc accgaagccg cctaccgcgt tttgcgcctg
     2461 cctgccgtag ccgccaaaaa cttcctgatt accatcggcg accgcagcgt cggcggcatg
     2521 acccaccgcg accaaatggt cggcaaatac caaacccccg tagccgactg cgccgttacc
     2581 atgatgggct tcaacaccta tcgcggcgaa gcgatgtcta tgggcgaaaa accggccgtc
     2641 gccctgtttg acgcgcccgc ctcgggcaga atgtgcgtcg gcgaagccat caccaacatc
     2701 gcggcagtca acatcggcga catcggcaac atcaaacttt ccgccaactg gatggcggcg
     2761 tgcggcaacg aaggcgaaga cgaaaaactc taccgcaccg tcgaagccgt ttctaaagcc
     2821 tgccaggcat tggatttgag cattcccgta ggtaaagaca gcctgtcgat gaaaaccgtg
     2881 tggcaggacg gcgaagagaa aaaatccgtg gtttcgccgt tgagcctgat tatttccgcg
     2941 ttcgcgcctg ttaaagacgt gcgaaaaacc gttacgcccg aattgaaaaa cgtcgaaggc
     3001 agcgtattgc tgtttatcga tttgggcttc ggcaaagcgc gcatgggcgg ctcggcgttc
     3061 ggtcaggtgt acaacaacat gagcggcgac gcgcccgatt tggacgatgc aggccgtctg
     3121 aaagcgtttt acagcgtaat tcaacagctt gtcgccgaag acaaactttt ggcgtatcac
     3181 gaccgcagcg acggcggttt gtttgcgacg ctggcggaaa tggcgtttgc ggcacggtgc
     3241 ggtattagtg ccgatataga ttgcctgatg gataaattcc tgccgattca tctcccggat
     3301 tttcaaggcg accctgccga agacttatct gacgaacttt ataatcatgc cgccattaaa
     3361 atcttattca atgaagaatt aggcgcggtt atccaaatcc gccaaaaaga tagggattat
     3421 gttgatgcgg catttgaaac ggccggctta accgatgcgg tcagccggat tggctctcct
     3481 gattttgaca atgagtttat ttctttcttt ggttacggtt atttcttgga acaaaaccgc
     3541 gccgacctgc aacgcgcgtg gcaggaaacc agccacgcca tccaacgcct gcgcgacaac
     3601 cctgcctgcg ccgacagcga gttcgccctg attggcgaca acgaacgcag cgcattgttt
     3661 gccgacgtga agttcgacgt gaacgaagac atcgccgcgc cgtttatcaa cagtggcgcg
     3721 aaacctaaaa tcgccatcct gcgcgaacag ggcgtaaacg ggcaaatcga aatggccgcc
     3781 gccttcaccc gcgccggatt cgatgcctac gacgtgcata tgtccgacct gatggctggc
     3841 cgcttccgcc ttgccgactt caaaatgctg gcggcgtgcg gcggcttcag ctacggcgac
     3901 gtactcggcg cgggtgaagg ctgggcgaaa tccatcctgt tccaccctgc cttgcgcgac
     3961 caattcgccg ccttctttgc cgatccgaac acgctgacat tgggcgtgtg caacggctgc
     4021 caaatggtca gcaaccttgc cgaaattatc ccgggcgcag aaacatggcc gaagttcaaa
     4081 cgcaacctga gcgagcagtt tgaagcgcgc ctgaatatgg ttcacgtccc caaatcagcg
     4141 tcgctgattt tgaacgaaat gcaagactcc agcctgcctg tcgtggtcag ccacggcgaa
     4201 ggccgcgccg acttcgcgct tcacggcggc aatatttccg ccgatttggg catcgcgctg
     4261 caatatgtgg acggtcaaaa ccaggttacc caaacctatc cgctcaaccc caacggctcg
     4321 ccgcagggca tcgccggcat taccaacgcc gacggccgcg ttaccattat gatgccccac
     4381 cccgaacgcg tgtaccgtgc cgcacaaatg agccggaaac cggaaggctg gacggaactg
     4441 tccggctggt accgcctctt tgccggcgca cgtaaagcct tgggctaaac cgtctgccca
     4501 aacaaatgcc gtctgaaaaa ggttttgaaa cccgtttcag acggcatttt gaccattctc
     4561 aagccctgcc ggtactcaat cccgctttac cgttttcccg caaagttttc agcaatactt
     4621 tccacgccga caatttaggg ttggactgtt ttccttgtcc gatcaaatcc atttgcgtca
     4681 tataccagtt catttctaac attgcacccg cttttttatc aacaaatgct acgccagttt
     4741 ggatgcggtc tgcttgtacg gtttggtaag ttctgttttg cattttgttc gccaaatcag
     4801 ggactaaggc aaacgggcgg gctatgccga ccaaatccaa atgaccgctg gataaggcat
     4861 cttccatggc ggtttgcgaa cggaatccgc cggtgataat cagcggggct tggctggctg
     4921 cacgggcttt ttcggcgtaa tcgatgaaga aggcttcgcg tttgcgggtg ctgtctttgg
     4981 cggcgagcat ttgcgggctt tcgtagttgc caccggaaac ttcaataaaa tcaatgccca
     5041 tttccgacag tttttgcacc acctgcaccg attcgctttc gtcaaatccg cctttttgga
     5101 aatctgccga attgagtttt acgcccacca agaaatcttt gcccgcggca gcgcgaatag
     5161 cggtgtaggt ttccaaaagg aagcgcatac ggttttccaa actgccgccc cattggtctt
     5221 ggcggcggtt gtggtgcggc gagaggaatt ggctgatgag ataaccgtgt acggcgtaaa
     5281 tttgtacgcc tgaaaagcct gcctgttcgg caattttggc agtttgtacg aattgctgaa
     5341 tcagcccgtt gatttcatcg gcactcaatt cgcgcggcgg attgataaag ccattcatgc
     5401 ccaccagcgg cacggcgctc ggtgcaagcg gtgttttatt gaccaccgca ggcgactgtt
     5461 tgcccgcatg attgatttgc atgatgagca gcgtgtcgtt ttgcgtgcgg gctttcgccc
     5521 attttttcag catttcaagg gcgcggtcgt ctgaaatcaa cacatcgttt atcgaacctt
     5581 tgccgctttc agccaccatc acattgcccg tcaccaaaac gcctgcgccg ccttctgccc
     5641 aagcgccgta caggcggaca agtttttcag acggctggtc gttttgggca agttgctctt
     5701 ccatggcgga tttgaagata cggtttttgg cggtttgccg ttttgaaaag tgaatggcgt
     5761 gaataacatg atcgttcctt taagttgata agtttaaaaa tgtaaacgta tttgggtaaa
     5821 aataaagggc caacggataa ccctattttg aaagcgggca attttgagcc atcaaatcgg
     5881 caagctgttt caatctcgcc accgcatccg ccatggcaat actgtaaaac cgctctttgc
     5941 cgacctgctc caccgccacc gctccggctt gcagcatgat ttttaaatgg tgcgacacag
     6001 cagggcgcga cagatgcaga tgctcggtca gctcattcac attcatccta ccgtgtttcc
     6061 acaatacatg caggatctga tggcggtttt catcgctcaa tacggtaaaa atgggtatgc
     6121 actcgcgcat taaattcatg gtttgttgcg gcatattcga tctattgagt ttatatattt
     6181 aaaaattcga acgtatttta gagggaaggt cggcagttat caaaggcagt ttggtttgca
     6241 gtttggcaat atattgttgc tgaaaggttt ttataagaaa aaatgccgcc tgaaacagca
     6301 tgatggcgtt tgctagggtt ccgctgtata ttaacgcctt tcggatacac ctttcagacg
     6361 gcatccgaac catcaaggaa cactcatgaa aattaccccc gtcaaagccc tgaccgacaa
     6421 ctacatctgg atgatacagc acggcaacca tgccgtctgc gtcgatcctt ccgaaccctc
     6481 gcccgtcttg gaattcctcg tacgcaaccg actcatgctc gcccaaacct gggtaacgca
     6541 cccccatccc gaccacgaag gcggtgcggc ggcactctgg cgcggctaca tggaatcgcc
     6601 cgtttacggc gaatccgaca tcgaagccgc cacccacacc gtaaccgccg gcacacgatt
     6661 caccttcggc aacggtcagg ttaccgtttg ggcaacaccc ggccacacag accgccacac
     6721 cagctacctt ctcgaaactt cagacggcat acacgttttc tgcggcgaca cccttttttc
     6781 cgccggctgc ggacgcgtgt ttaccggcac ggtcgaacag ctttacgaca gcttccaacg
     6841 gttcaaccaa ttacccgaag gcaccctgtt ctatccggca cacgaataca ccgccgccaa
     6901 cctgcgtttc gccgcccata tcgagccgga caacgccgac attcagacgg cattgaaggc
     6961 ggcggaacgc acgcccaccc tgcccgttac cctcgcgcac gaacgccgcg tcaacccgtt
     7021 cttacggaca gaaatccccg ccgtccgcca acgtgccgaa gccctggtcg gcaaaacgct
     7081 gaacagcggt ttggaagtat tcgccgccct gcgcgaactg aaaaacgcct accgctgacc
     7141 tgccctccga aaaatgccgt ctgaaacccg cgtttcagac ggcatttgcg ttaaaaatag
     7201 taaaccgttt caaaagggag tagaatagtg ctgtttccaa tcccgtgcct gatttttcgg
     7261 gcttttatta tggaccttcc cagttcgttt ttactgaaca ccccttccga ttccaaacga
     7321 caataaccat cccgccggaa tgcctccccg cacacggcgg gcggagcatt tatgagcatc
     7381 gaacacactc ctccgacaca cgacggcgaa accggtcaaa accatgccga acgcccttcc
     7441 gccgatttcg accgtgtcca ctccctctgc gaaatcctcg aacctgcttt tgaacaaatc
     7501 gaaaacggca caccgctcga agatgcgccg ctgcgcgaca aactgaccga gctgaccgtc
     7561 ctcttggccg agttgcaccc tgccgacgtg gccgacgtct tggagtccct gccgccgcgc
     7621 gaacgcaata tcgtttggct tctggtcaaa cccgaagacg acggcgaagt attgctggaa
     7681 gtatccgacg cggtgcgaga aacgctgatc gagtcaatgg acaaggacga attgttggcg
     7741 gcggtcgatg atttggatgc ggacgaattg gcggagctgg cagacgattt gccgcaccaa
     7801 gtggtttatg aagccttaca gacgcgcgat gaggaagagc gcgcccaagt caaggcggca
     7861 atgtcgtatg aagacaacca agtcggtgcg attatggact tcgagttggt cagcatccgc
     7921 gccgatgtcg cctgcgaagt ggtgctgcgt tatctgcgcc gcttcgacag cctgcccgac
     7981 cataccgaca agatttttgt cgtcgatgaa aacgacgtgc tgcagggcgt gctgcccatc
     8041 cgcaaacttt tggtcgccga tcccgaagat ttggtggaaa acgtgatggc gaaagatgtc
     8101 gtgcgtttcc gcgccgagga cgacgtggaa gaagcggcgc aggcgtttga acgctacgac
     8161 ttggttaccg cgcccgtcgt tgatgaaaac aaaaagctca tcggcaggat taccatcgac
     8221 gagatggtgg acgtgatccg cgaagaatcc gaagcggata tgttgaacat ggcaggtttg
     8281 caggaagagg aagacctgtt cgcccccgtc ttggattccg tcaaaaaccg ctggatgtgg
     8341 ctcgccgtca acctctgcac cgccttcctc gccagccgcg tcatcggcgc gtttgaaggc
     8401 agtatcgaaa aaatcgtcgc actcgccgcg ctgatgccca tcgtcgccgg catcggcggt
     8461 aactcgggca accagacgat taccatgatt gtccgcgcga tggcgatggg gcagctgacg
     8521 gatatgcagg cgggaaggct gttgaaaaaa gaagtcggcg tcgccttggt caacggcatt
     8581 atttggggga cggtgatggg agcggtttcg tggctgcttt acggcagcct cggcatcggt
     8641 ttggtcatgg ttgccgcgat gacgctcaac ctcctgctgg cggcaacggt cggcgtattg
     8701 attcccgtgg taatggaaaa attcggacgc gatcccgcgc tgggcagctc ggtgctgatt
     8761 accgccgtta ccgactccgg cggcttcctc attttcttga gtctcgccac cctgttcctg
     8821 ctttaaatgc cgtcccgacc cgcgcaaaaa tgccgtctga agcagaagct gcttcagacg
     8881 gcatttgacc attcatcctt gttgctcaag attattggac ggtatgtcgg ggcagccctt
     8941 tggcaacgcc gaccacatcc tccccgaaca gcgcgttgac atcggtttca tcaaacacgt
     9001 atttgctgtg gcagaagtcg caatcgactt cgatgctgcc ttgttccgcc accacgccgc
     9061 cgacttcttc cccgcccagc atcaacagca tatcgctgac cttgccccga gaacaggtac
     9121 atgaggattc aaacgtttcc ggctcgaaca cgcgcggcgg cgtttcgtgg aacaggcggt
     9181 ataaaacgtg ttgcgcgtcc aattctgcca gctcctccgc cgtcagcgtg cgcgccagcg
     9241 tactgacgtg ttcccatgcc tcttcatcca acacctcttc aggcagacgc tgcaccagca
     9301 gcccgcccgc cgcttcatcg cttgcagaca gggcgatgtg cgtatcaagc tgttcggaac
     9361 gtttcatata gttcaccaac atttgcgcga tgctgccgcc ttccaaaggc actacgccct
     9421 gccagggttc gccgtctttg ggttgcaggg tcaatacgaa cacgccgttg ccgcccaaaa
     9481 ggtcgccgag gctttcgtca tcggctattt ctgcggtttc gtcccaccgc gcggttgcac
     9541 ggacggtacg gtcggaagtc gcttccgcaa ccagcatttt cagttttccc tgcccctgaa
     9601 cctgcacaat cagcgtgcct tcgtttttaa ggttgcccga cagcagaacg ccggcagcca
     9661 gtagctctcc caaggcgcag cggatggcgg cgggatagtt tttctgtttt acaatgtgct
     9721 gccacacgtt ttccagacgg acgtgcagcc cgcgcacggg catatcgtcg aagataaagc
     9781 gggtacgcgc atcggcgcgg ttgatggcgg tttgattcat gattttctct gactgattgt
     9841 tcggatggcg gctatatggt tgcggtcggc gcgaaaacaa ggcggacggc ggatgcgctt
     9901 cccaaattct caataaatta tataaaaatc aacatattaa ctcaatctaa caagccgttt
     9961 tttgccaaac agccgttttt ttatatacaa tcaacaagat attttcgact gatacagcat
    10021 aacatcgcac ggcggcacga tgcctcctgc gcggaaacac cgatatggat tcttttttca
    10081 aaccggcagt ttgggcggtt ttgtggctga tgtttgccgt ccgccccgcc cttgccgacg
    10141 agttgaccaa cctgctcagc agccgcgagc agattctcag acagtttgcc gaagacgaac
    10201 agcccgtttt acccgtcaac cgagcccccg cccggcgggc gggcaatgcc gacgaactca
    10261 tcggcaacgc gatggggctt aacgaacagc ccgttttacc cgtcaaccga gcccccgccc
    10321 ggcgggcggg caatgccgac gaactcatcg gcagcgcgat ggggcttttg ggtattgcct
    10381 accgctacgg cggcacatcg gtttctaccg gttttgactg cagcggcttc atgcagcaca
    10441 tcttcaaacg cgccatgggc atcaacctgc cgcgcacgtc ggcggaacag gcgcggatgg
    10501 gtacgccggt tgcccgaagc gaattgcagc ccggggatat ggtgtttttc cgcacgctcg
    10561 gcggcagccg catttcccat gtcggacttt atatcggcaa caaccgcttc atccacgcgc
    10621 cgcgcacggg gaaaaatatc gaaatcacca gcctgagcca caaatattgg agcggcaaat
    10681 atgcgttcgc ccgccgggtc aagaaaaacg acccgtcacg ctttctgaac tgatttccca
    10741 aggaatacgc aatgagtatg cccgaaatgc ccaaatggta cggcgatgac ggacagatcg
    10801 tatcctgtac cgaaaaggtc aaagtaatgg ccgaaaacat gtctgaactg taccaaacag
    10861 cacaggatgc atttgaagac gcgttgctga tgggttgcgg cgaacggcag ttgcgcgctt
    10921 acctgctcgc gctgattgaa ggtttggaaa atccctaccg caaagtctga acacgccccg
    10981 gttgctgcgg cacggtttat ccgtgccgtt tttgcgtttg tgcgcggctt cggcttttca
    11041 gacggcatat ttgacgttat gattaaacag ttaacaagat ttatcacaac gccgtcaaaa
    11101 gacagacaca caacatgaac accatccgcg cgctcctcat catcctcggc tgcctcgccg
    11161 ccggcgaaac cgccgttttc ctagcaggca tcaaactgcc cggcagcatc gtcggcatgg
    11221 gcgtgctgtt tgcgcttttg caggcgggtt gggtcaaaac gtcttggctg caacagctta
    11281 ccgacgcgct gatggcaaac ctgacgctgt tcctcgtgcc gccctgcgtg gcggtcatca
    11341 gctatttgga tttgattgcc gacgattggt tttcgatact ggtttccgcc tccgccagca
    11401 ctttgtgcgt actgctggtt acgggcaagg ttcaccgctg gatacggagc attatctgat
    11461 gagcgaaatc ctcaggcagc ccagcgttct gcttttcctc acgcttgccg tgtacgcgct
    11521 tgcgattatc gtgcgcacgc gcacgggcaa tatcttctgc aaccccgtac tcgtcagcac
    11581 tatcgtgctg attgcctacc tgaaaatcct cggtatcgat tatgcggtgt accacaacgc
    11641 cgcgcaattc attgattttc ggctgaaacc cgccgtcgtc gtgcttgccg tgccgctcta
    11701 ccaaaaccgc cgtaaaatct tcaaccagtg gctgcccgtc atcgtttcgc agcttgcggg
    11761 cagcgttacg ggcattgtta cggggatgta ttttgccaag tggctgggcg cggaacgcga
    11821 agtcgtcctc ccgctcgcgt ccaaatctgt taccaacccc atcgccatcg aaatcacccg
    11881 ctccatcggc ggcattcccg ccattaccgc cgccaccgtc atcattgccg gtctggtcgg
    11941 acagattgcc ggttacaaaa tgttgaagaa cacggtcgtc atgccctcgt ccgtgggtat
    12001 gtcgctcggc acggcttcgc acgcgatggg cattgccgcc tcgctcgaac gcagccgccg
    12061 catggcggca tacgcggggc tggggctgac gttcaacggc gtgctgaccg cgctgattgc
    12121 gccgctgctt atccccgttt tggggttctg aacccgtttc agacggcatt tcaacccatg
    12181 ccgtctgaac gccgacacac tcgcaaggag aaccgttatg gctgtcaacc tgaccgaaaa
    12241 aaccgccgaa caactgcccg acatcgacgg cattgccctc tacaccgccc aagcaggcgt
    12301 gaagaagccc gggcataccg acctgacact gattgccgta gccgccggca gcaccgtcgg
    12361 tgcagtcttc acgaccaacc gtttctgtgc cgcgcccgtc cacatcgcca aatcgcacct
    12421 tttcgacgaa gacggcgtgc gcgccctcgt catcaacacg ggcaacgcca acgcgggtac
    12481 gggcgcacag ggcagaatcg atgctttggc agtgtgtgcc gccgccgccc ggcaaatcgg
    12541 ctgcaaaccg aaccaggtgc tgcccttctc caccggcgtg attctcgaac cgctgcccgc
    12601 agacaaaatc atcgccgccc tgcccaaaat gcagcctgcc ttctggaacg aagcggcacg
    12661 cgccatcatg accaccgaca ccgttcccaa agccgcctcg cgcgaaggca aggtcggcga
    12721 ccaacacacc gtccgcgcca caggcattgc caaaggctcg ggcatgattc atcccaatat
    12781 ggcgaccatg ctcggtttca tcgccaccga tgccaaagtt tcccaacccg tcctccaact
    12841 gatgacgcag gaaatcgccg acgaaacctt caacaccatc accgttgacg gcgacaccag
    12901 caccaacgac agcttcgtca tcatcgccac cggcaaaaac agccaaagcg aaatcgacaa
    12961 catcgccgac ccgcgttacg cccaactcaa agaattgttg tgcagccttg cgctcgaact
    13021 cgcccaagcc atcgtccgcg acggcgaggg cgcgaccaag ttcatcaccg tccgcgtcga
    13081 aaacgccaaa acctgcgacg aagcccgcca agccgcctac gccgcggcac gttcgccact
    13141 ggtcaaaacc gcctttttcg cctccgaccc caacctcggc aggctgctcg ccgccatcgg
    13201 ttatgccgac gttgccgacc tcgataccga cctcgtggaa atgtatctcg acgatatttt
    13261 ggttgccgaa cacggcggac gcgccgcaag ctacaccgaa gcacaagggc aggcggtgat
    13321 gtcgaaggac gaaatcaccg tccgcatcaa gctgcatcgc ggacaagccg ccgccaccgt
    13381 ctatacctgc gacctgtcgc acggatacgt ttccatcaac gccgactacc gttcctgacc
    13441 cgacacggct tcagacggca tacataaaat gccgtctgaa ccgtcggaca acataccatg
    13501 acctccacat tcccccgccg cctcgcccgc aaaatccgcc aaacccgccg cctgtcgcgc
    13561 aaaagcatcg cctttctgtt ccttctggca ggttcggcac tcgtcgccct gaccgcactg
    13621 ttttttgccc atcttgccga ttttgcgctg gaactgaacg ccaaactggt tcaacaatac
    13681 ccgtggttcg catggattgc cctgccgccg ggactgcccg tcatcgtctg gctcacacgc
    13741 aaattcgccc ccttcaccgc cggcagcggc atccctcaag tcatcgcctc actgtcgctg
    13801 ccctacggcg cacaaaaaac gcggctgata cgcctcgggc aaacgctgct gaagattccg
    13861 ctgacctttt tggggatgct gttcggcgcg tccatcggac gcgaaggccc gtccgtgcag
    13921 gtcggcgcgg cagtaatggg cgcgtggggc gcgtggtgca aaaaacacgg tttggcgttt
    13981 aagggtatgc aggaaaacga tttgatggcg gcgggcgcgg cgggcggttt ggcagcagcg
    14041 ttcaacgcgc cgctggcggg cgtgattttc gccattgagg aactggggcg cggcatcatg
    14101 ctgcgctggg agcggcagat tctgctcggc gtactcgccg ccggtttcat acaggtcgcc
    14161 attcagggca acaacccgta tttttcgggt ttcaacggcg gcgttttgga aaatattttg
    14221 atgtggatcg tggcggcggg gctggtttgc ggcgcggctg gcggcatatt tgcccgtatg
    14281 ctctatcgcg gtgcggcggc gtttgcaccg cgatgctcta tcgcggtgcg gcggcgtttg
    14341 caccgcgcaa gatacgcggc ttcatccgca accgtccgct gctgctggcg gcactgatgg
    14401 ggctgctgct cgccctgctc ggcacgttct accaaggcaa aacctacggc accggctacc
    14461 acgaagccgc ccaagccctg cacggcatct acgaagcccc cgtcggactc gccgccgcca
    14521 aatggctcgc caccgtattc agctattggg caggcattcc gggcggcatt ttcactccct
    14581 cgctgaccat aggtgcggtt ttgggcgagc atatcgccgc catcgccgac atatcgcagg
    14641 gtgcaaacat catcgtcctc atctgcatgg cggcattttt agcgggcgcg acacaatcgc
    14701 cgattacttc cgccgtcgtc gtcatggaaa tgaccggcgg gcaaagcctg ctgttttgga
    14761 tgctgattgc ctgcattttc gcctcgcagg tttcgcgcca gttttcgccg cgtccgttct
    14821 accacgcatc gggaatgcgc ttccgccggc gcgtgcttca ggaaaccgcc gcccaaaccg
    14881 gcaatgcgcc cgcaagaccg caagccgcaa acagcaaaac gggaatgccg tctgaaaatt
    14941 aaaacgcccc cgatcaaacg ccggcagccg ccttgattca aataccgttc cgctgcgctt
    15001 gaaatttcag caacaatgcc gtctgaacga cagaatgcgg ttttcagacg gcatttcccc
    15061 atcccgatat tgctcaaaca aaaccgaagc gtttgctata attgcacttt ttaccgcaca
    15121 cgcacgccca tgtttcccga tttctcccaa accctctcca aagaccgcca cttcctgcaa
    15181 tccgccttca aaaatcccaa caaatacggc ggcttgtcca aaatcgaaga aaaataccga
    15241 aaatcgcacg aaatcttctt gaaacgtttg gccgcattgc caaaacccga attcgacaac
    15301 accctgcccg ttcacgaaaa actcgaagaa atcaaaaaaa ccgttgccga aaatcaggta
    15361 acgattatct gcggcgaaac cggttcgggc aaaaccacgc agttgcccaa gatttgtttg
    15421 gaactcgggc gtggggcggc aggattgatc gggcataccc agccgcgccg tttggccgcg
    15481 cgttcggtgg cggagcggat tgccgaagag ctgaaatccg aaatcggcag cgcggtcggc
    15541 tataaagtgc gctttaccga ccacacctcg cgcgatgcct gcgtcaagct gatgaccgac
    15601 ggcatcctgc tggcggaaac ccagaccgac cgttatctcg ccgcctacga cacgattatc
    15661 attgacgaag cgcatgaacg cagcctgaac atcgacttcc tcttgggcta cctaaaacaa
    15721 ctcctgccgc gccgccccga tttgaaagtc atcatcacat cagccaccat agacgcagaa
    15781 cgcttctccc gacacttcaa cggcgcgccc gtactggaag tgagcgggcg cacctatccc
    15841 gtcgaaatcc tctaccgacc gctgaccggc aaagacgaag acgacgcaga agtcgagctg
    15901 accgacgcga ttgtcgatgc cgccgacgaa ttggcacgct acggcgaagg cgatatttta
    15961 gtattcctgc cgggcgaacg cgaaatccgc gaagcggcag aagccctgcg caaatccaca
    16021 ctgcgccgca atgacgaaat cctgcccctg tttgcacgcc tgtcgcacgc cgaacagcac
    16081 aaaatcttcc acccttcagg cgcaaaatgc cgcatcgtgc tggcgaccaa cgtcgccgaa
    16141 acctcgctca ccgtgccggg catcaaatac gtcatcgaca ccggcctcgc gcgcgtcaaa
    16201 cgctattccg cgcgggcaaa agtggaacaa cttcacgtag aaaaaatctc ccaagccgcc
    16261 gcccgccaac gctccggccg ctgcggacgc gtctcagcag gcgtgtgtat ccgactgttt
    16321 tcagaagaag attttaacag ccgtcccgaa tttaccgatc ccgaaatcgt ccgcagcaac
    16381 ctcgccgccg tcatcctgcg catggcatcg ctgaacttgg gcgacgtagc agcattcccg
    16441 tttttagaaa tgcccgattc gcgatatatc aatgacggtt ttcaggtgtt gctggaattg
    16501 ggggcagtgg aggttgtctg aaaacaggca gatcgggcgt ttatgcccaa cgagaacctt
    16561 attgtcacta ttattaggga ttaatacaat gaatataaaa gaatttatgt ctaactatac
    16621 caaccatccc gtt
//
LOCUS       DAXGCP010000048        16550 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.048, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000048 DAXGCP010000000
VERSION     DAXGCP010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16550
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.048"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(282..998)
                     /gene="trmB"
                     /locus_tag="ACFJCW_001307"
     CDS             complement(282..998)
                     /gene="trmB"
                     /locus_tag="ACFJCW_001307"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HFC4151436.1"
                     /translation="MTDTAENQTPNDRQAGHPRSIRSFVLRQSHMTAAQQRAIDTLWD
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGMASAEIARRLPETDFLAIDVHGPGVG
                     NLLKLINENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(1120..2525)
                     /locus_tag="ACFJCW_001308"
                     /pseudo
     CDS             complement(1120..2525)
                     /locus_tag="ACFJCW_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            complement(2642..4528)
                     /gene="uvrC"
                     /locus_tag="ACFJCW_001309"
     CDS             complement(2642..4528)
                     /gene="uvrC"
                     /locus_tag="ACFJCW_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HFC4151437.1"
                     /translation="MPSEAVFQMIDMNTENRSPEQFDIPLFLKNLPKLPGVYRFFDEG
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVRHIETTITRSEAEALILENNFI
                     KTLSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKNPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCTAPCVGHISEEDYCDSVRQAATFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIIQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGLVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPVPDALKEALEGEHGKQMQFVTKTIGERKVWLKMAEQNAQMAITQRHLQQSNQ
                     QHRIDELAKILGMNSDGINRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLTRRYGKIQEAEANGESVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGELFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLGDIPGVGSKRRQALLTRFGGLRGVIAASREDLGKVEGISKALAETIY
                     NHLH"
     gene            complement(4583..6760)
                     /locus_tag="ACFJCW_001310"
     CDS             complement(4583..6760)
                     /locus_tag="ACFJCW_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC4151438.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VTFDGSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLLTINIPFLIG
                     MVGMMLKGLNWTRHDWMIPPVWQFVLASIVQLWLAIPFYKSAWASIKGGLANMDVLVT
                     IGTVSIYLYSVYMLFFSSHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLG
                     LLLKLTPTQVNVQRNGEWKQLPIDQVQIGDLIRTNHGERIAADGIIESGSGWADESHL
                     TGESNPEEKKAGGKVLAGALMTEGSVVYRAAQLGSQTLLGDMMNALSEAQGSKAPIAR
                     VADKAAAVFVPTVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAI
                     MVGMGKAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYYVPDSGFDED
                     ALYRIAAAVEQNAAHPLARAIVSAAQARGLEIPAAQNAQTVVGTGITAEVEGVGLVKS
                     GKAEFAELTLPKFSDGVWEIASAVTVSVNGKPIGAFALSDALKADTAEAIGRLKKHNI
                     DVYIMSGDNQSTVEYVAKQLGIAHAFGNMSPCDKAAEVQKLKAAGKTVAMVGDGINDA
                     PALAAANVSFAMKGGADVAEHTASATLMQHSVNQLADALLISQATLENIKQNLFFAFF
                     YNILGIPLAALGFLNPVIAGAAMAASSVSVLGNALRLKWVKID"
     gene            6899..7849
                     /gene="trxB"
                     /locus_tag="ACFJCW_001311"
     CDS             6899..7849
                     /gene="trxB"
                     /locus_tag="ACFJCW_001311"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HFC4151439.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFALKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSDQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            8005..8373
                     /gene="rpsF"
                     /locus_tag="ACFJCW_001312"
     CDS             8005..8373
                     /gene="rpsF"
                     /locus_tag="ACFJCW_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HFC4151440.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMITEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVGELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLVGAAEEAAAQ"
     gene            8374..8676
                     /gene="priB"
                     /locus_tag="ACFJCW_001313"
     CDS             8374..8676
                     /gene="priB"
                     /locus_tag="ACFJCW_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HFC4151441.1"
                     /translation="MGFTNLVSLAALIEKAFPIRYTPAGIPVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIKEYKG"
     gene            8683..8913
                     /gene="rpsR"
                     /locus_tag="ACFJCW_001314"
     CDS             8683..8913
                     /gene="rpsR"
                     /locus_tag="ACFJCW_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HFC4151442.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            8930..9382
                     /gene="rplI"
                     /locus_tag="ACFJCW_001315"
     CDS             8930..9382
                     /gene="rplI"
                     /locus_tag="ACFJCW_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HFC4151443.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEVNM
                     KEFEARRAELEAKQAEILADARARQEKLDGQTVTVAQKAGVDGRLFGSVTNADIAAAI
                     VAAGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVIAAAE"
     gene            9396..9527
                     /locus_tag="ACFJCW_001316"
     CDS             9396..9527
                     /locus_tag="ACFJCW_001316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HFC4151444.1"
                     /translation="MPSETLPIIRMWFQTAFVLFSVYSAKIGTVVFYLPEVFAEMVC"
     gene            9715..9879
                     /locus_tag="ACFJCW_001317"
     CDS             9715..9879
                     /locus_tag="ACFJCW_001317"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151445.1"
                     /translation="MIAKVAACMPVIMAEIPFGRQSHRMSRHGRRCADAFGREGREIG
                     SLEKGNGIRR"
     gene            complement(10004..10810)
                     /locus_tag="ACFJCW_001318"
     CDS             complement(10004..10810)
                     /locus_tag="ACFJCW_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HFC4151446.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQTVDWKTIFAMMPGMIFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTGRQTASRPLPGLPGLTAVSTLFGAMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLVNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKESFGIMLLLIAGKMLYNLL"
     gene            complement(10811..11557)
                     /gene="pssA"
                     /locus_tag="ACFJCW_001319"
     CDS             complement(10811..11557)
                     /gene="pssA"
                     /locus_tag="ACFJCW_001319"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HFC4151447.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            12140..12622
                     /locus_tag="ACFJCW_001320"
     CDS             12140..12622
                     /locus_tag="ACFJCW_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HFC4151448.1"
                     /translation="MMKKILAVSALCLMTAAAQAADTYGYLAVWQNPQDANDVLQVKT
                     TKEDSAKSEAFAELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVSLAYPKALGAMR
                     VENAVVITSPRFTSVHQVALNQCIKKYGAQGQCGLETVYCTSSSYYGGAVRSLIQHLK
                     "
     gene            complement(12669..13880)
                     /locus_tag="ACFJCW_001321"
     CDS             complement(12669..13880)
                     /locus_tag="ACFJCW_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HFC4151449.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSVGEWGLPSTMFGLFAAGFMYFVFAALIRWRG
                     LAAVHKLLPPVVTGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTTSIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGIKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFVGVGLCAVLAIV
                     LNSLLPDPKES"
     gene            14102..16540
                     /locus_tag="ACFJCW_001322"
     CDS             14102..16540
                     /locus_tag="ACFJCW_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HFC4151450.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTEAKKARPEHVVNLIADALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDA
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALRKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQPSLFEDNEVQQNGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPEEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEQAKAAGKPLLNPFSLNLDEPEPLEKLPMIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGTFVSDGEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGIVSPSD
                     LNGSRKILAHKDHL"
BASE COUNT         3776 a         4148 c         4687 g         3939 t
ORIGIN      
        1 tgcctgaatg tacacctaag tcttcttttg gtaacgatga ataattagca agccgtagcc
       61 tgcatctccg ccaaccgcgt gccactatct gcgggcggaa taaactttaa aaccgatgtg
      121 caggttaaaa cctacaagga tgcgtgcggt atacatgcgt ttttgccgtt caaaccattg
      181 tttcaaaact tgtattgaaa catcgcccgc tgctttatct tgaaagaatg ccgtctgtaa
      241 gcaaacatgc ttcagacggc atttttttat ccggcggtct gttatccgat ccgtttgaat
      301 accaagtccc aaacgccgtg tccgaggcgt ttgccgcgcg cttcgaattt ggtttcgggg
      361 cggtagtccg gagtgggggc gtagtctgcc gccgtatttt gcaggctgtc gaagctgctg
      421 aggacttcaa gcatctgctg tgcatattct tcccagtctg tcgccaggtg gatatagccg
      481 ccggttttga gtttgggcag tagtttggcg atgaaggggg cttgtatcag acggcgtttg
      541 tggtggcgtt ttttgtgcca cgggtcgggg aagaatatgt ggatgccgtc gagcgagccg
      601 tcttgcagca tattttcgac aacttctacg gcatcgtgcc gcatcacgcg gatgttttcc
      661 aaatggtttt cgttgatgag tttgagcagg ttgcctacgc cggggccgtg tacgtcgatg
      721 gcgagaaagt cggtttcggg caggcggcgg gcgatttctg cgcttgccat ccccataccg
      781 aagcctattt cgaggatttt aggtcggctg cttccgaaac gggcatcaag atcggccggt
      841 gttgcttggt agtcgatgcc gaagctgtcc cataaggtat cgatggcgcg ttgctgtgcg
      901 gcggtcatgt ggctttggcg gaggacgaaa ctgcggatgc tgcgggggtg tccggcttga
      961 cggtcgtttg gtgtttggtt ttcggcggtg tctgtcataa tgcttctgtg cgcttgtgca
     1021 atcaggatgc cgtctgaatg tgaaaggcct gttcggacgg cgggaaggga aaggggcgat
     1081 tatacctgtt tcgtttcggc agggtaggtg taactctgtt cagacggcat tttgccactg
     1141 ttgcagcagt tcttgcagga cgcttttttg cccgtatccg ttgtttatgg cttcttgcag
     1201 gtagcggcag gctttttctt tgtccggcct ggcaccgtgt ccgctgtaat ggatgcaggc
     1261 gaggttgtag aacgccatac tgtctttttg cgcggcggct tgttcaaacc atttgcgggc
     1321 tttgcagtag tcggcggcta tgccctgtcc gaagtagtac atactgccca gattggtttg
     1381 ggctttgctg tgtccgagtt ctgctgcttc tgtgtagagt ttgagcgcgg ctgcgtattc
     1441 gggcgcgcat tgtaatccgt aatgcagggc ttgggctttt tgataaagct gttctgccct
     1501 ttgccgccta atggcggaat ctttgatgcc gtcatattgc tcgggatggt ttaacgcgct
     1561 gtcggatatg agtttctgat aggcggtaag gctgccggct tcggctgcct gccggtaata
     1621 atgccgggct ttttccgtat cgagggctat gcccaaaccg tagcggcaga tgtcgcccgg
     1681 tatccgcaaa ccttcgggat ggcgttcggc ggcggctgct tcggcatgat gcagggcaag
     1741 tttgtggttt ctttccagat acttgccttg caggtagatg tcggccagtg cggcatgggc
     1801 atcggggtca ttttcctgtg ccgcctgttg gaaccggtaa acggcttcat cgggagccgt
     1861 aggtaggatg agttcggcaa gcggggtgta ggcgggaatg tatccttgtt gcgcggcggc
     1921 gcgcaaatga ttgacggcct gtgccgtgtc ggttttcgtc ccttgtccga aacggtattg
     1981 cagcccgagt tgccaatgtg cttccggcaa gccttgtgcc gccgctttgc ggtagagcag
     2041 gtgcgccgtt tcaaaatccg gcggcgtgcc gtgccggcag tattgggcga gcaggtattg
     2101 cccgcgggga ttgttgtttt ttgcgcttgt tttgcccatt ccagggcttc ttcaaaatgt
     2161 cgggacgcgt acagaaggta catcaggcgg acttgcgctt cgggcaggcc tgcttctgcc
     2221 agaggcctgt aaagcggtat cagggtttcc gggggcgcgc cttccaattc ttggatatat
     2281 gccaaattgt aacgcgcata gggatgcccc tgttcggcgg cgatgcggag catttccata
     2341 ccttgttcgc ggtcttggtg cgggctgtcc gcgttcatca ggtgttttgc caacttgaat
     2401 gcggcggcgg gatgatctgc cgaggccgct tctgtcagca gtcggcggac ttcggtaaag
     2461 ttataatatt gtttttgaga caggcgttcc aaggcctgcc gatagggtaa gtcgggattg
     2521 ttcatatcag atcgttttcc gttttgtcga atcatcgtta ttcgtcatga agttaggttt
     2581 atatcggtat gccggcctgc tgtatcatat ttttacaggc ggtttttgct ttggcggcat
     2641 actaatgcag atgattataa atggtttccg ccaatgcctt gctgatgcct tccacttttc
     2701 ccaagtcctc gcggctggcg gcaatcacgc cgcgcagtcc gccgaagcgg gtaagcaggg
     2761 cttggcggcg tttgctgcct acaccgggaa tgtcgccgag agacgaggta acgcgtgctt
     2821 tgtcgcgttt tttacggtgg cctgtgatgg caaagcggtg tgattcatcg cgtacggttt
     2881 gcaataaatg caaggccggg ctattaggag gcaggcggaa gagttcgccg gtaaaaggca
     2941 gtatgagttc ttccatgccg gctttgcgtt cggggccttt ggcaataccg actaaaggga
     3001 tgtgcagccc gagttcttcc catacggata cggctacgcc gatttgccct ttaccgccgt
     3061 caatcaacac gacatccggc catttgacgc tttcgccgtt ggcttcggct tcctgtattt
     3121 tgccataacg gcgcgtcaac acttcgcgca tggcggcgta gtcgtcgccg ggtttggcgg
     3181 tggtgatgtt gtagcggcgg tattgcgagg gttggatgtt ttgttcgtcg tacacgacgc
     3241 aggaggcgat ggtggcttcg ccttgcgtgt ggctgatatc gaaacattca aggcggttga
     3301 ttccgtctga attcatgccg aggattttgg caagttcgtc gatgcggtgt tgttggttgc
     3361 tttgttgcag gtggcgttgg gtaatcgcca tttgtgcgtt ttgttccgcc attttcaacc
     3421 aaactttgcg ttcgcctatg gttttggtaa cgaactgcat ctgcttgccg tgttctcctt
     3481 ccaaagcctc tttcaacgca tcgggaacgg gaaagttgct gatgatgatg tcgggtttgc
     3541 ttttgcccag atagtgttgg gcgacgaagg cttcggcgta atcttgaccg tttggttcgg
     3601 ggtcgttttt ggtgtcggga aagaaacttt tgtcgccgac gtgccgtccg ccgcggatgc
     3661 tgacccagtg tacgcagaca aggccgtctg aaacggcgag cgcgagcagg tcgatatcgt
     3721 tggggttgtt cgggtttttg ctgtcgatga actggttgct ctgtataatg ccgagtgctt
     3781 ggatttggtc gcgataacgg gcggcttctt caaattgcag attcgcggcg gcggtctgca
     3841 ttttgtgttg cagggtgcgg gtcagttcgt cggttttgcc gttgaggaaa gtggcggctt
     3901 gacgcacgct gtcgcagtag tcttcttcgc tgatgtgtcc gacgcagggc gcggtgcagc
     3961 gtttgatttg gtacagtagg caagggcggt cgcggtgttc gaacacgctg tcttcgcagg
     4021 tacgcagcat gaagactttt tgcaacactt gaatgctgtc gcgcacggcg ttgctgttcg
     4081 gatacgggcc gaagtattgg ttgggatttt tcagcgtgcc gcggtaatac gccatttgcg
     4141 gatattgatg gccgctgagc atcaaataag gatagctttt gtcgtcgcga aaaaggatat
     4201 tgtatttcgg cgacaaggtt ttgatgaagt tgttttcgag aatcagggct tcggcttcgg
     4261 aacgcgtgat ggtggtttcg atgtggcgaa cctgtttcac catcaacgcg atgcgcggcg
     4321 aatggtcgtt tttttggaaa tagccggaca cgcgccgctt gaggttgacc gctttgccga
     4381 cgtataagac gttgccgcct tcgtcaaaaa aacggtacac gcccggcagc ttgggcaggt
     4441 ttttgaggaa gagcgggatg tcgaattgtt ccggagaacg gttttctgta ttcatatcaa
     4501 tcatttgaaa aacggcttca gacggcatat cggcagcggc agccttatcc gttcggaaaa
     4561 gctgtcgggc ggttatatgc ggtcaatcga tttttaccca tttcaggcgc agggcattgc
     4621 ccaataccga aaccgagctt gccgccattg ccgcgcctgc tatgacggga tttaaaaagc
     4681 cgagcgcggc gagcggaatg cccaatatat tgtagaagaa ggcgaaaaat aggttttgct
     4741 tgatgttttc caacgttgcc tgcgatatca gcagggcatc ggcgagctga ttgaccgaat
     4801 gctgcatcag cgtggcggag gcggtgtgtt cggcaacgtc cgcaccgcct ttcatggcga
     4861 agctgacgtt ggcggcggca agcgcgggcg cgtcgttgat gccgtcgccg accatcgcca
     4921 cggttttgcc ggcggctttg agtttctgca cttcggcggc tttgtcgcac ggactcatat
     4981 taccgaaggc gtgtgcgatg cccagttgtt tggcgacgta ttcgaccgta ctttggttat
     5041 cgccgctcat aatatagaca tcgatattgt gttttttcag acggcctatg gcttcggcgg
     5101 tatcggcttt caacgcgtcg gagagtgcga atgcgccgat cggtttgccg tttacagata
     5161 cggtaaccgc actggcgatt tcccaaacgc cgtctgaaaa cttcggcaag gtcagttcgg
     5221 caaattcggc tttgcctgat ttcaccaaac ccacgccttc cacttcggcg gtaatgcctg
     5281 ttccgacaac ggtttgcgca ttttgtgcag cgggaatctc caaaccgcgc gcttgtgcgg
     5341 cggagacgat ggcgcgggcg agcgggtggg cggcgttttg ctcgacggcg gcggcgatgc
     5401 ggtacaaagc gtcttcgtca aagccgctgt cgggaacgta ataaacggcg gcaacctgcg
     5461 gcctgccttc ggtcagcgta ccggttttgt ccaatacgac ggcatcgacg tgggctgctt
     5521 cctccattgc cgccgcgtct ttaaaccaaa tgccgtgttt caccgctttg cccatgccga
     5581 ccataatcgc ggcaggggtc gccagaccga gcgcgcacgg gcaggcaatc accaaaacgg
     5641 caacggcgtg catcagtgcg accgtccaat cgcccttaat cagccaagta acgataaaag
     5701 tcagaagcgc gatgcccacg acagttggca caaataccgc cgccgcttta tcggccacgc
     5761 gcgcaatcgg tgctttactg ccttgtgctt cagagagcgc gttcatcatg tcgccgagca
     5821 gggtttggct gccgagctgc gcggcgcggt acaccacgct gccttcggtc atcagcgcgc
     5881 ccgccaacac tttgccgccc gcctttttct cttcgggatt ggattcgccg gtaaggtggc
     5941 tttcgtccgc ccaaccgctg ccgctttcga taatgccgtc ggcagcgatg cgttcgccgt
     6001 ggttggtgcg gataaggtcg ccgatttgca cttggtcgat gggcagttgt ttccattcgc
     6061 cgttgcgttg cacgttgact tgggtcggcg tgagttttag cagtaagccc aagctgttca
     6121 ggctggattt tttggtgcgg tgttccaaaa atttacccag cgacacaaaa ccgatcacca
     6181 tcacgcccgc ttcaaaatac acatgcgcca taccgtgcgc cgcatgcgaa ctgaaaaaca
     6241 gcatataaac ggaatacagg taaatcgaca ccgtgccgat ggtaacgagt acgtccatat
     6301 tcgccagccc gcctttaatg cttgcccacg cgcttttgta aaacgggatt gccagccaaa
     6361 gttgcactat gcttgccagt acaaactgcc atacaggcgg aatcatccaa tcgtgccgtg
     6421 tccaattcag cccttttagc atcatcccta ccataccgat aaggaacggg atattgatgg
     6481 tcagcaaaag ccacaaccgc cagccgatat ggtgttctgc ttcaggttgc ggcaatgtat
     6541 cttccgtttt ttccttcgcg ccgtaaccgg ttttctcaat gattttggca atgtcggcaa
     6601 ccgaggtttt gctgccgtca aacgtaacct gcgcttcctc actggcaaag ttcactcccg
     6661 ccgattcgac aaaatctttt ttgttcaaca ctttttcaat gcgcgaagca catgcctgac
     6721 aggtcatccc ctcgatttgg aaacggattt tttgttgcat aagtttgatt cccgttttga
     6781 tgttcagacg gcagtcaagg ctgcgggatg ccgtctgaac gccggtatgg tcaaaatttc
     6841 tcaaacgcgc cgataattcg ggtagaatcc gaaaacttga cacagcaaag gaaaaacaat
     6901 gtcccaacac cgcaaactga ttattttggg ttccggcccc gccggataca ccgccgccgt
     6961 ctatgccgca cgtgccaatt taaaccccgt cattattaca ggtatcgcgc aaggcgggca
     7021 actgatgaca acgactgaag tggacaactg gcctgccgat gccgacggcg tgcaagggcc
     7081 ggaattgatg gcgcggtttc tcgcccacgc cgaacgtttc ggaacggaaa tcatttttga
     7141 ccaaatcaac gccgtcgatc tgcaaaaacg cccgttcgca ctcaaaggcg atatgggcga
     7201 gtacacttgc gatgccctga ttgtcgccac cggcgcgtcc gccaaatacc ttggtttgcc
     7261 gagtgaggaa gcgtttgcag ggaaaggcgt ttccgcctgc gccacctgcg acggtttctt
     7321 ctacaaaaac caagatgttg ccgtagtcgg cggcggcaat acggcagttg aggaggcact
     7381 ctaccttgcc aatatcgcca aaaccgttac gctgattcac cgccgcagcg agttccgtgc
     7441 tgaaaaaatc atgattgaca aactgatgaa acgcgtggaa gagggcaaaa tcatcctcaa
     7501 gctggaaagc aacctgcaag aagtactggg cgacgatcgg ggcgtaaatg gcgcattatt
     7561 aaaaaacaac gacggttctg atcaacaaat tgccgtcagc ggcatcttta tcgccatcgg
     7621 gcacaagccg aataccgata ttttcaaagg gcagttggaa atggacgaag ccggctacct
     7681 gaaaacaaaa ggcggcacgg cggacaatgt cggtgcaacc aatatcgaag gcgtatgggc
     7741 ggcgggcgac gtaaaagacc atacctaccg tcaggcaatt accagcgcgg cctccggctg
     7801 tcaggcggct ttggacgcgg aacgttggct gggcagccaa aacatttgaa tgccgtctga
     7861 aaccgaaatt ttcggcggaa tgcaagtttt tcgtaccaaa tccttgattc cgtcggcaaa
     7921 ccccaatata atgcctgcta tttgaacctt gccttctgct ttcgcatggc agaaggctgt
     7981 ttttaccatc cataaggaga taacatgcgt cattacgaga tcgtgtttat cgttcatcct
     8041 gatcaaagcg agcaagtgcc cgctatggtt gaacgttaca aaaccatgat taccgaggca
     8101 aacggtaaga ttcaccgttt ggaagattgg ggccgccgcc aactggctta cccgattaac
     8161 aaaatccata aagcacatta tgttttgatg aacatcgaaa ccactcccga agttgttggg
     8221 gagttggaaa ccgcgttccg tttcaatgat gcggtattgc gtcatctgac catcaaaacc
     8281 aaacacgccg ttaccgaagc ctcccctatg ctgggcggcg aaaaggctaa gaacctgttg
     8341 gtcggcgcgg ctgaagaagc ggctgcccaa taattgggat tcactaatct tgtttcgctt
     8401 gccgcattga ttgaaaaggc tttccctatt cgatatacgc ctgccggaat ccctgtttta
     8461 gatattattt taaagcacga atcgtggcag gaggaaaatg ggcagcaatg ccttgtccaa
     8521 ttggaaatcc ccgcgcggat tttgggtagg caggcggaag agtggcagta tcggcaaggt
     8581 gtatatgttc acgtcgaagg ttttttagct caaaaaagca gacgttccct gatgccgatg
     8641 ctcaggatac aaaatattaa agaatataaa ggttaaacga caatggctcg tcaatcattc
     8701 aaacgtagaa aattctgccg tttcacggct gaaaaaatcc aagaagtcga ttacaaacaa
     8761 gttgatttgc tgaaagactt tatctctgaa aacggtaaaa tcattcctgc ccgcatcaca
     8821 ggaacgaagg cattctacca acgccaattg gctgttgccg taaaacgcgc gcgcttcttg
     8881 gcactcctgc cttataccga ccaacacaaa taattttgga gtttaaatca tgcaaattat
     8941 tctgttagaa aaaatcggcg gtttgggtaa tttgggcgac atcgttaccg taaaaaacgg
     9001 ttatgcccgc aacttcttga ttcctgctgg taaggcaaaa cgtgctactg aagtaaacat
     9061 gaaagagttt gaagcacgcc gcgccgaatt ggaagccaaa caggccgaaa ttttggcaga
     9121 tgcccgagcc cgtcaggaaa aactggacgg tcaaaccgtt accgttgcac agaaagccgg
     9181 tgtggacggc cgcctgttcg gttccgttac caatgccgac attgctgccg caatcgttgc
     9241 tgccggcatc gaagccgtga aagcaaatgt acgtctgccg aacggtcctc tgaaagccgt
     9301 tggagagtac gaagtggaag tggctttaca cactgatgcc gttgctaaaa ttactgttgc
     9361 cgtcattgcc gcagccgagt aattgaaatt atcagatgcc gtctgaaacc ctgccgatta
     9421 tcagaatgtg gtttcagacg gcatttgttt tgttttccgt atattctgca aaaatcggga
     9481 cggttgtttt ttatttgcct gaggtctttg cagaaatggt ttgttaacga aatttgatgc
     9541 ataaaatgcg ccaaaaaata ttggctgtgt tttaatatag tgttgataag cgtacctggt
     9601 ttcaatatat tcaataggat aggtctcttc ccaaccgaaa aaataattgt cttttctctt
     9661 gtaaatagtt gaaatagatt gtcaaaatac attctaaaaa atttaataac ttatatgatt
     9721 gcaaaggttg cggcttgtat gccggtcatt atggcggaaa taccgtttgg gaggcagtcg
     9781 catcgcatga gtcggcacgg caggcgatgc gccgatgcct tcgggcgtga aggcagggaa
     9841 atcggcagtt tggaaaaagg caatggaatc cgcaggtagg tgtcgattgg gtggtgaaag
     9901 gcaataagtc gggcgcacgc tcagactgcc tatccccttg tcggaacggg aggtagggca
     9961 gctttgtcct gactaattgc ttgtgcaaac ggtaagaagg tttttaaagc aggttgtaca
    10021 gcatttttcc ggcaatcaaa agcaacataa tgccgaagga ttctttgagt ttggcagaag
    10081 aaagtttgtg ggcggttttg acaccgagcg gggcaaaggc aatagttgcc gcgctgagga
    10141 cggcgacggc gggcaggtaa aggaagccca gcgacccttc gggcaatcct gcaatattca
    10201 gaccgttgac cagatacgat attgcgccgg agagtgcaat cggccaggca aggccggatg
    10261 atgtgccgat ggctttatgg gcggggaagc cgcagtggat taagaagggg acggaaagtg
    10321 aaccgccgcc tatgccgacc cagctcgaca ttgcgccgaa cagtgtggaa accgcagtca
    10381 gtccgggcag cccgggcagc gggcgggatg ccgtctgacg accggtatgc agtgttttga
    10441 atgcgacggc ggttaaaaac aggatgaaga aaatttgaag cccgaacgcg gggatatatt
    10501 ttgcggagag tgcgccagcg aatacgccga atatcatacc cggcatcatc gcaaatatgg
    10561 ttttccagtc gaccgtctgt tttttgtgct gccccaacat actggaaaag gcggtgaaga
    10621 ccatgacggc gaaggatgtg ccgacggcga ggtgttgcgc gtaaggatgt tgtgccaaac
    10681 cctgcaaatc aagcacccat aaaacgacag ggacaatcag cgtaccgccg cctacaccga
    10741 acaggccggc aataaaacct gccgcactgc ctacggcaag caggattaag ataatgtccc
    10801 aatgccacat ttaatccgcc tttctgtatt ttttccaaaa tcggcgtgcc gccataatgt
    10861 agccggacag gctgtatccg agaaagaaca ggaaaaggac gagcgacggt tcccaagtga
    10921 ccagaagcag cagtaagacg gcaagcagca ttccgacaaa ggggacttgt ctgcggatgt
    10981 tgatttcttt aaaactccaa aaagggattt ggacaatcat cgacaggccg gcaaacagtg
    11041 tgatgcctaa tgcccaccag tggacggcgg ggaatttttc gacgctgtgg ttgacccaaa
    11101 tcagcccgac aatcagcgcg gcggcagtcg gactgggtac gccgataaac cagcgtttgt
    11161 ccaccttgcc gatgagcgtg ttgaacagcg cgaggcgtag ggcggcgcag gcgcagtaga
    11221 tgaaggcgac ggaataaccg attttgccga actgccaaag ctgccatttg taggcaataa
    11281 gcgcgggggc aacgccgaag ctgaccatgt cggcaaggct gtcgagctgc tccccgaacg
    11341 cgctttggct gttggtcagc cgcgccacgc gcccgtccat accgtccagc agcatagaga
    11401 tgaataccgc gatggcggcg gtttcataac gtccgtgcat ggattgggta atggcgtaaa
    11461 acgcggaaaa cagcgcggcg atggtaaagg aattgggcag caggtagata ctgttttgac
    11521 gcagggagcg ttgcggggtg ttggtcgggg tttccatagc tgaagtgtct cacggacgtg
    11581 gagaatcgat aggggattat aacccaaacc attatcgaac aatacgccct ttaggatgaa
    11641 gccctcggag gcggtttgtt tttctgatgg cggatgcttt gcggggcggt ttgactctgc
    11701 ctgccaccgg gtgtgttgtt tcggattttg ccggatggat attgttgccg ggcatttctg
    11761 cgcttgccgg aaggtatcgg agggaaggca tcggaatatg cggcgcgccg ttcaaaccgg
    11821 ggcggtattt ccctattttt tggggggtgc aggtttcaac aaattgaaag atattttttg
    11881 catttccgac cgtatgctga ttttgaagcg ggataaatta taggacaagg tttttcgccc
    11941 gccgcaaagg ttgcccgcaa tgccgtctga aaacaacggc ttgccgctaa ggcggcaata
    12001 tgaggatttg cgctgccgaa accggtttgc tacaacccgg cagtgaaatc tgcagggagg
    12061 gataggccga taaggcggga cttatcttgt tttttgttta taatgcaaca gaatttggag
    12121 gaatcgtcgg gaatttatca tgatgaaaaa gatactggca gtatcggcac tatgcctgat
    12181 gactgcggcg gcacaggctg ccgatactta cggctatctc gccgtttggc agaatccgca
    12241 ggatgcaaac gatgttttgc aggttaaaac cacaaaagaa gattcggcga aaagcgaagc
    12301 gtttgccgag ttggaagcct tttgcaaagg tcaggacacg cttgcgggca ttgccgaaga
    12361 cgagccgacc ggatgccggt cggtcgtgtc gctgaacaat acctgtgtct cgctggcata
    12421 cccgaaagcc ttgggcgcga tgcgcgttga aaacgccgtc gtgattactt ctccgcgttt
    12481 tacgagcgtt catcaggtcg cactcaacca gtgcataaaa aaatacggcg cacagggaca
    12541 atgcggcttg gaaacagtgt attgcacgtc atcttcttat tacggcgggg ctgttcgctc
    12601 cttaatccaa cacctgaaat aaaaaatgcc gtctgaagga tgttcggacg gcatttccat
    12661 atcgacggtc aggattcttt cggatcgggc agcaggctgt tcaacacaat ggcgagtacg
    12721 gcgcacaagc ccacgccgac aaagctgaag ctgcccaatt tgagtgtcat accgccgatg
    12781 cccgtggtca gtaccgagct gacgatgacc aggtttttcg gcagcatcaa atcgactttg
    12841 gcatcaatca gggttttgat gcctaaagaa gcaatcgtgc cgaacagcag cagcataatg
    12901 ccgcccatca cgggcatcgg aatggaagcc aaaaacgcat tgaatttgcc gaaaaacgcc
    12961 atgcagacgg caaaaaccgc cgcccaagtc atgatgacgg ggttgctgtt tttggtaatc
    13021 atcaccgcac ccgttacttc gccgtaggtt gtaaccggcg ggccgccgat cagacctgca
    13081 acgcacacgc ccaagccgtc gcccgcaagg gttttgtcca agcccgggtc ttttgtgtag
    13141 tcttttcccg ttacattgcc gattgccatg atgccgccga tgtgttcgat ggcgggggcg
    13201 acggcaacgg gcagcataaa cagtgccgcc tgccagttga cctgaggcgt ttcaaaatgg
    13261 ggaacggcga accagggcgc gtgtgcaatg cttgtcgtgt ccaccagtcc catcagcagt
    13321 gccaaaacat aacccgaagc gacaccgatc aagatgggaa tcagcttcat catcctgctg
    13381 ccgaaaaccg atacgatggc ggtaacggca aaggtaaagc cggaaagaat cagcgaatcg
    13441 gtatagtcga tgacctgttt gccgtcagcc tgacccattg ccatgctgct tgccgccacg
    13501 gcaacagaca gaccgatgac catgatgaca gggccggtga cgaccggcgg cagcagtttg
    13561 tgtaccgccg ccagtccgcg ccaacggatc agcgcggcaa acacaaaata cataaagccg
    13621 gcggcaaaca gcccgaacat ggtggaaggc agcccccatt cgccgacgga gtagataatc
    13681 ggcgcgataa aggcaaacga agaaccgaga aaaatcggta ctttgcgttt ggttgtgatt
    13741 tggaacagca gcgttcccaa gcctgcgccc aaaagcgcaa gagccggatt cagaccggtc
    13801 agcaggggaa ccagcaccat tgcgccgaat gccacaaata aaatctgcgc gccggaaacg
    13861 gcaagtttca gttggttcat accatcttct ttcaatcggt tcaaacggca cggattatac
    13921 tggtttgccg aggggctgcg taaaaataca tacgtcgggc aaagatatgc cgtctgaaag
    13981 gcaacgtctg tctgttgcag gatgaaagcg ggagaaatgg agtataatcc gacactttcc
    14041 atattcaatc cgcaagccgt cccgaaccct tatttcagac ggcattttcc ggtaatacgg
    14101 catgacagaa aaatcccata aaaaaacagc aaaaggcagg gcgggaagcc cgtccccaac
    14161 gtccgcacgc aacaagaaag ccgacaacgg cgcgcggggc aataaagttt ccgagcggct
    14221 caaggcggtc aaagagctgc agaaaactga agccaaaaag gcgcgtcccg aacatgtcgt
    14281 caacctgatt gccgacgcgc tgtggctgat gggtttggcg gcaaccctgt atttggcgat
    14341 ttccctgatc agtttcgata tgggcgatcc gtcttggtcg cacagttcac cggttgtgga
    14401 agatgccgcc aattggggcg gactgttcgg cgcgtatgtt gccgatgtcg gctattatct
    14461 tttcggctgg tcgttctggt ggtggatagc ggctgcctgc gtcgtgctgt ataaaaattt
    14521 ccgtctgcac gcaaaacaga cggaaaacga ggcatacaac cacaaaatcg ctgccgccgc
    14581 gctgtttgtc ctgacggtct tcagccccgt cttggagtat tttgtgctgg gcggaaaata
    14641 tgccgactcc ctgcctgtcg gagcaggcgg tatggtcggc atacgtgtcg gcgcagtgtt
    14701 tgcgtggctg ttggggaaat cgggcagcct gctgattatc ctggttgttc tgctgttgtc
    14761 gttgtccctg ctggtgcaga tttcatggct ggaatttttg aacggtgcgg gcagggcggt
    14821 tcaaaaccgc ctgagtgcct tatccggcaa ggtcatggct ttgagaaaac gccggccgaa
    14881 taccaaaaca gacggtgtcg atacccaaaa tacacggcgc atggtgaaag aagccaaaaa
    14941 catcactgcc aaacccgttg ccttgcccga aggcagcagc agcaaccgca aatccgtcgc
    15001 ggtttccgtt gcgccgccgc ctaaaatcca accttcgctg tttgaagaca atgaagtaca
    15061 gcagaacggc gaataccaca agcctacatt gaacctattg cggattcccg acagcgagcc
    15121 ggtcagcatc aatcccgccg aattggagcg cactgccgaa ctaatcgaat ccaaactggc
    15181 agaattcggc atcggcgtac aagtcgtatc cgcgacatcc ggccccgtca tcacgcgcta
    15241 cgaaatcgaa cccgcgcaag gtgtcaaagg cagccaaatt gttgccctgt cgaaagattt
    15301 ggcacgctct atgtcgctgc aatccgtgcg tatcgtcgaa accattgcgg gcaaaaacac
    15361 gatgggcatc gagttgccca acgacaaacg ccaagacgtg atgttgagcg aaatcttgtc
    15421 ctcgcccgtg tttgccgaag ccaaatccaa gctgaccgtc gcgctgggca aagacatcgc
    15481 cggtacgccc gtcgtcggcg acttggcgaa aatgccgcac cttttggtcg ccggcatgac
    15541 cggttcgggc aaatccgtcg gcgtgaacgg catgattatg tctatgcttt tcaaagctac
    15601 gcccgaagaa gtccgcttca ttatgataga cccgaaaatg ctcgagttga gcatttacga
    15661 cggcattccg cacctactct gtcccgtcgt taccgatatg cgcgaagcag ggcaggcgtt
    15721 gaactggtgc gtcgccgaaa tggaaaaacg ctaccgcctg ctctcccacg ccggtgtacg
    15781 caatctggaa ggcttcaacc aaaaagtcga acaagccaaa gcggcaggca agccgctgct
    15841 caatccgttc agcctgaacc tcgacgaacc tgagccactg gaaaaactgc cgatgatcgt
    15901 ggtcgttatc gacgaacttg ccgacctgat gatgaccgaa cgcaaagctg tcgagcagca
    15961 aatcgcccgc ctcgcccaaa aagcgcgcgc cgccggcata cacatgattg tcgccaccca
    16021 acgcccaagc gtcgatgtcg taaccggtct gattaaagcc aacatcccga cgcgtatggc
    16081 gtttaccgtg caaagcaaaa tcgacagccg taccatcctc gaccaaatgg gcgcggacga
    16141 actgctcaaa tatggcgatt cgctgttcct gcaaccgggc agtgccgaac cgacccgcct
    16201 gcaaggcacg tttgtttcag acggcgaagt gcatcaagtc gtcaactacg tcaaatcgca
    16261 agccccagcc gactatattg aaggtctgct cagcggcgaa gccgcgctgg aaactgccaa
    16321 tatcgttaat ccgaatgcag acagcgacga attattcgat caggcagtcg cctatgtttt
    16381 ggaaagcaaa aaaacctcca tttcgtcttt gcagcggcag ttgcgtatcg gctataaccg
    16441 cgcggcaaac ctgatggagg cactggaaaa tgcgggtatc gtttctccct ccgacctcaa
    16501 cggcagccgt aaaattttgg cgcacaagga ccatttatag cccgtatcgc
//
LOCUS       DAXGCP010000049        16521 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.049, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000049 DAXGCP010000000
VERSION     DAXGCP010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16521
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.049"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            234..1298
                     /locus_tag="ACFJCW_001323"
     CDS             234..1298
                     /locus_tag="ACFJCW_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HFC4151451.1"
                     /translation="MKAARFYNKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDKLVSEG
                     FERLIHNNESAVKIIVNPNL"
     gene            1439..1762
                     /locus_tag="ACFJCW_001324"
     CDS             1439..1762
                     /locus_tag="ACFJCW_001324"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HFC4151452.1"
                     /translation="MGDSVLSAIQQTIIQRKSADPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKDPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELSRRQGLSGLAEKA
                     ARTES"
     gene            1836..2159
                     /locus_tag="ACFJCW_001325"
     CDS             1836..2159
                     /locus_tag="ACFJCW_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HFC4151453.1"
                     /translation="MDNCIFCKIAAKEIPAQTVYEDGEMVCFKDINPAAPLHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKASGLTDGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2206..2409
                     /gene="tatA"
                     /locus_tag="ACFJCW_001326"
     CDS             2206..2409
                     /gene="tatA"
                     /locus_tag="ACFJCW_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HFC4151454.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2413..3099
                     /gene="tatB"
                     /locus_tag="ACFJCW_001327"
     CDS             2413..3099
                     /gene="tatB"
                     /locus_tag="ACFJCW_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HFC4151455.1"
                     /translation="MFDFGLGELIFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKVKQAFEAAAAQVRDSLKETDTDMQNSLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPLPDTANTVSDGISDVMPSERSDTSAETLGDDRQTGSTAEPAE
                     TDKDRAWREYLTASAAAPVVQAVEVSYIDTAVETPVPHTTSLRKQAINRKRDFRPKHR
                     AKPKLRVRKS"
     gene            3112..3882
                     /gene="tatC"
                     /locus_tag="ACFJCW_001328"
     CDS             3112..3882
                     /gene="tatC"
                     /locus_tag="ACFJCW_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HFC4151456.1"
                     /translation="MSETQNEQTVQPLVEHLIELRRRLMWMVVGILVCFFGMMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLVSLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTAFEVPIVVILLTKIGAVTTEQLKHARPYVIVGAFVVAAVITPPDIIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPAKT"
     gene            3926..4534
                     /locus_tag="ACFJCW_001329"
     CDS             3926..4534
                     /locus_tag="ACFJCW_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HFC4151457.1"
                     /translation="MNTLYLGSGSPRRMEILTQLGYRVVKLPAGIDETVKAGETPAPY
                     VQRMAEEKNQAALTLFCETNGAMPDFPLITADTCVFSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMEKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRPPLSALKP"
     gene            4543..4896
                     /locus_tag="ACFJCW_001330"
     CDS             4543..4896
                     /locus_tag="ACFJCW_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HFC4151458.1"
                     /translation="MNRQTAYFLASFSLIALIALSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEKICAALSAVFSIIFFIS
                     CLSFVKQYKETNNVR"
     gene            4886..6814
                     /locus_tag="ACFJCW_001331"
     CDS             4886..6814
                     /locus_tag="ACFJCW_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HFC4151459.1"
                     /translation="MSAETTVSGARPAAKLPIYILPCFLWIGIIPFTFALRLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWWLQARLMNLIYPGMNDI
                     ASWVFILLAVSAWACKSLVAHYGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWENTPL
                     LQNIIVHRGQGVIGHIGQRNNLGHYLMWGILASAYLNGQRKIPAALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNAILETF
                     TGIRYETAVERVANGGFTDLPRQSEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     TIHDNFLSTLFTHSHNIILQLLAEMGISGTLLVAATLLTGIAGLLKRSLTPASLFLLC
                     ALAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNSFSPAADDSAKTLNRKINELRYISANIPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKALKYRPYSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPETKPCKRPASADADTARNVKLHARHC
                     KKQQTGREIRYQKTLQPC"
     gene            6890..7567
                     /gene="misR"
                     /locus_tag="ACFJCW_001332"
     CDS             6890..7567
                     /gene="misR"
                     /locus_tag="ACFJCW_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HFC4151460.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7580..8986
                     /gene="misS"
                     /locus_tag="ACFJCW_001333"
     CDS             7580..8986
                     /gene="misS"
                     /locus_tag="ACFJCW_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HFC4151461.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFKTRGDNGAREILTEWKNSPVSSAVYVIQGDEKKDILNRYIDNYTIE
                     RARLFAANNPHSNLVRIEYDRFGEEYLFFIKGWDNHQAQRLPSPLFIPGLPLAPIWHE
                     FIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMAEKLEKLVAKERYLLHHVSHEMRSPLARMQAIVGLIQAQPQKREQYLKRL
                     EGELTRMDTLAGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVAL
                     SADGKIPENTTILANESYLYRAFDNVIRNAVNYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGFKTEKSAN"
     gene            9104..11527
                     /locus_tag="ACFJCW_001334"
                     /pseudo
     CDS             9104..11527
                     /locus_tag="ACFJCW_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            11572..11817
                     /gene="rpsP"
                     /locus_tag="ACFJCW_001335"
     CDS             11572..11817
                     /gene="rpsP"
                     /locus_tag="ACFJCW_001335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HFC4151462.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAV"
     gene            11833..12342
                     /gene="rimM"
                     /locus_tag="ACFJCW_001336"
     CDS             11833..12342
                     /gene="rimM"
                     /locus_tag="ACFJCW_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HFC4151463.1"
                     /translation="MTDAQNRVAMGYIKGVFGIKGWLKIAANTEYSDSLLDYPEWHLA
                     KDGKTVSVTLEAGKVVNGELQVKFEGIDDRDSAFSLRGYTIEIPREAFAPTEEDEYYW
                     ADLVGMTVVNKDDTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12342..13091
                     /gene="trmD"
                     /locus_tag="ACFJCW_001337"
     CDS             12342..13091
                     /gene="trmD"
                     /locus_tag="ACFJCW_001337"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HFC4151464.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQTAKVIYLSPQGKPLTHQKAAEL
                     AELTHLILLCGRYEGIDERLLQSSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGIL
                     GDIQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLNKILQEQREIQS"
     gene            13106..13471
                     /gene="rplS"
                     /locus_tag="ACFJCW_001338"
     CDS             13106..13471
                     /gene="rplS"
                     /locus_tag="ACFJCW_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HFC4151465.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13792..14517
                     /locus_tag="ACFJCW_001339"
     CDS             13792..14517
                     /locus_tag="ACFJCW_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HFC4151466.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTSQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFK
                     GINTAQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCGGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TESYLAQASAKMQQQESPDWCAS"
     gene            14552..15427
                     /locus_tag="ACFJCW_001340"
     CDS             14552..15427
                     /locus_tag="ACFJCW_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HFC4151467.1"
                     /translation="MNLYDLLLAPFAEFDFMHYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGVGGFAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVILISKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSGLTLITLAVIY
                     RPLVLESIDPLFLKSVNGKGGLWHVVFLILVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWARNMGTLILLSVLIALFCGLIGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILPKWFKNHRHHTT"
     gene            15504..16418
                     /locus_tag="ACFJCW_001341"
     CDS             15504..16418
                     /locus_tag="ACFJCW_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HFC4151468.1"
                     /translation="MKHLKLTLITALLATAATAAPLPVVTSFSILGDVAKQIGGERVA
                     VQSLVGANQDTHAYHMTSGDIKKIRSAKLVLLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEYDPHVWNDPVLMSDYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGNRYNISFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNVKALTNAMKQ"
BASE COUNT         4276 a         5278 c         3661 g         3306 t
ORIGIN      
        1 attaagggga tattcgggta aaattaggag gtatttgggg cgaaaacagc cgaaaacctg
       61 tgtttgggtt tcggatgtcg ggagggaagg gaattttgca aaggtctcag tttgtagtaa
      121 aatatctaaa cagattcaat cggaaacggt caggcttctt cacgccattc ccatttcaac
      181 cgccgcctgc tagattcaga cggcattcct acttgaaaac aaggagcgtt acaatgaaag
      241 cagcacgttt ttacaacaaa ggcgacatcc gcatcgaaga catccccgaa ccgaccgtcg
      301 cccccggcac cgtcggcatc aatgtcgcct ggtgcggcat ctgcggtacc gacctgcacg
      361 aatttatgga aggcccgatt ttcatcccgc cctgcggtca tccgcatccg atttccggcg
      421 agtccgcgcc cgtaacgatg ggacacgagt tctccggcgt ggtttatgcc gtcggcgaag
      481 gcgtggacga cattaaagtc ggccaacacg tcgtggtcga accctacatc atccgcgacg
      541 acgtaccgac cggcgaaggc agcaactacc acctctccaa agacatgaac tttatcggct
      601 tgggcggctg cggcggcggc ctgtccgaaa aaatcgccgt caaacgccgt tgggtgcatc
      661 cgatttccga caaaatcccg ttggatcaag ctgctttgat tgaacctctg tctgtcggac
      721 accacgccta tgtacgcagc ggcgcgaaag caggcgatgt cgcattggtc ggcggcgcag
      781 gcccgatcgg tttgctgttg gccgccgtgt tgaaagccaa aggcatcaaa gtcatcatta
      841 ccgagttgag taaagcacgc aaagacaaag cccgcgaatc cggcgttgcc gactacatcc
      901 tcgacccgtc cgaagtcgat gttgttgaag aagtgaaaaa actgaccaac ggcgaaggcg
      961 tggacgtggc gttcgaatgt accagcgtga acaaagtgtt ggatactttg gtcgaagcct
     1021 gcaaacccgc cgccaacttg gttatcgtat ccatctggag ccaccccgcc accgtcaacg
     1081 tccacagcgt cgtgatgaaa gaactggatg tgcgcggcac gattgcctac tgcaacgacc
     1141 acgcggaaac catcaaactg gtcgaagaag gcaaaatcaa cctcgaaccc ttcatcaccc
     1201 agcgcatcaa gctggacaaa ctggtttccg aaggcttcga gcgtctgatc cacaacaacg
     1261 aatccgccgt taaaattatt gtgaatccaa acctgtaagc aaattacatt tgcaacagca
     1321 caaatgccgt ctgaaacgct cagacggcat tttccaacga aacgcaacag gcgtattgcc
     1381 cgagagcagc cgtttagcct atcattccga acaaacagaa acaaacagaa ggaaaatcat
     1441 gggagattcc gtactatccg ccatccaaca aaccattata cagcgcaaat ctgccgaccc
     1501 gtccgaatct tacgtcgcac agctcctgca caagggcgag gacaaaatcc taaaaaaagt
     1561 gattgaagaa gcgggcgaag tgttgatggc atccaaagac aaagacccgt cccacctggt
     1621 ttacgaagtt gccgacttat ggttccacac catgattctt ctgacacacc acgacctgaa
     1681 ggcggaagac gtattggacg aactttcccg ccgtcagggg ctgtcggggc tggccgaaaa
     1741 agccgcccgt acagaatcct gaatttatat tacaatctca tcccttccac gtttaatccg
     1801 tctgcgtgct tttttcagac ggcaacggag ccgttatgga caactgtatt ttctgcaaaa
     1861 tcgccgccaa agagattccg gcgcaaaccg tctatgaaga cggcgaaatg gtttgtttca
     1921 aagacatcaa ccccgccgct ccgcttcatc tgctgctgat tcccaaagtc cattttgatt
     1981 cgttggcaca cgccgcgccc gaacatcagc cccttttggg aaaaatgatg ctgaaagttc
     2041 ccgaaatcgc caaagcttcg ggactgaccg acggtttcaa aacccttatc aataccggca
     2101 aaggcggcgg acaagaggtc ttccacctgc atatacacat catgggcaca cccgtataaa
     2161 ccgttatttc acaatcaacc cctaatactt acttaaggat acatcatggg cagtttttct
     2221 ctgacgcact ggattatcgt actgattatc gtcgttttga tattcggcac caaaaaactg
     2281 cgcaacgtcg gcaaagacct cggcggtgcg gttcatgact tcaaacaggg gctgaacgaa
     2341 ggcacagacg gcaaagaagc ccaaaaagac gatgtaatcg aacacaaaaa agacgaagac
     2401 aaagcataac ttatgtttga tttcggtttg ggcgagctga tttttgtcgg cattatcgcc
     2461 ctgattgtcc ttggtccaga acgcctgccc gaagccgccc gcaccgccgg acggctcatc
     2521 ggcaggctgc aacgctttgt aggaagcgtc aaacaagaat ttgacactca aatcgaactg
     2581 gaagagctga ggaaggtcaa gcaggcattc gaagctgccg ccgctcaggt tcgagacagc
     2641 ctcaaagaaa ccgatacgga tatgcagaac agtctgcacg acatttccga cggtctgaag
     2701 ccttgggaaa aactgcccga acagcgcacg cctgccgatt tcggtgtcga tgaaaacggc
     2761 aatccccttc ccgatacggc aaacaccgta tcagacggca tttccgacgt tatgccgtct
     2821 gaacgttccg atacttccgc cgaaaccctt ggggacgaca ggcaaaccgg cagtacagcc
     2881 gaacctgcgg aaaccgacaa agaccgcgca tggcgggaat acctgactgc ttctgccgcc
     2941 gcacctgtcg tacaggccgt cgaagtcagc tatatcgata ctgctgttga aacgcctgtt
     3001 ccgcacacca cttccctgcg caaacaggca ataaaccgca aacgcgattt tcgtccgaaa
     3061 caccgcgcca aaccgaaatt gcgcgtccgt aaatcataaa gggggcatcc ggtgtccgaa
     3121 acacaaaacg aacaaaccgt ccaaccgctt gtcgaacacc tcatcgagct gcgccgccgc
     3181 ctgatgtgga tggttgtcgg cattctcgtc tgctttttcg gcatgatgcc gtttgcccag
     3241 cagctctata cttttatcgc cgacccgctg atggcaaacc tgcccaaaga caccagtatg
     3301 attgcgaccg atgtcatcgc accgtttttc gttccggtca aagttaccct gatggcggcg
     3361 tttttggttt cactgccgca tacgctctac caaatctggg cattcgtcgc ccccgcactc
     3421 taccaaaacg aaaaacgcct gattacgccg ctcgtcctct ccagcgtcag cctgtttttc
     3481 atcggcatgg catttgccta tttcctggtt ttccccgtca ttttcaaatt ccttgccggc
     3541 gtaacccccg tcggggtcaa tatggcgacc gacatagaca aatacctgtc ctttatctta
     3601 ggtatgttcg ttgcgttcgg cacggcattt gaagtgccca tcgtcgtcat cctgttaacc
     3661 aaaatcggcg cagtcacgac cgagcagctc aaacacgccc ggccttatgt cattgtcggc
     3721 gcgtttgtcg ttgccgcagt catcacgccg cccgacatta tttctcagac cctgcttgcc
     3781 attccgctga tcctcttata cgaggcgggc atttggttcg gacgcttctt cactccacgt
     3841 tcagaacagg atggcgacat acagccgcct gcaaaaacct gacactatgc cgtctgaagc
     3901 cccgccgcac attaaggagc acaccgtgaa caccctttac ttaggttcgg gcagcccgcg
     3961 ccggatggaa atcctgacac agttgggcta tcgggtcgtc aagctgcccg ccggcatcga
     4021 cgaaaccgtt aaagccggcg aaacgcccgc cccttacgtc caaaggatgg cggaagaaaa
     4081 aaatcaggcg gctttgaccc tcttttgcga aaccaacggc gcaatgcccg atttccccct
     4141 gattaccgcc gacacctgcg tcttttcaga cggcatcata ttgggcaaac ctcgctccca
     4201 agccgaagca atcgaatttt taaaccgatt gtccggcaaa caacataccg tcctgactgc
     4261 tgtctgcatt cattatcgcg gcaaaacgtc aagccgcgtc caaaccaacc gcgtcgtttt
     4321 caagcccctg agttcggaag aaatttccgc ctatgtgcaa agcggcgaac cgatggagaa
     4381 agccggtgcc tacgccgtgc aaggcatagg cggtatcttt atccaatcta tcgaaggcag
     4441 cttcagcggc attatggggc tgcccgttta tgaaaccgtt tccatgttgc aggatttggg
     4501 ataccgcccc cccttatccg cccttaaacc gtaaagtccg ccgtgaacag acaaaccgct
     4561 tacttccttg cctccttcag cctgattgca ctgattgccc tatccctttc ttgggaatta
     4621 tggattgcac cgttacgccc gggcggttcg tggctcgcgc tcaaagccct gcccctctgc
     4681 ctgccgcttt caggtattct aaagaaaaaa atctatacct accaatacag ctccatgctg
     4741 gttctgattt actttgccga agccgtcatg cgcctgttcg acgcctatcc cgcagaaaaa
     4801 atttgcgccg cgctttccgc agtattcagc atcatcttct tcatatcctg cctgtcgttc
     4861 gtcaaacaat acaaggaaac aaacaatgtc cgctgaaacg accgtatccg gcgcgcgccc
     4921 cgccgccaaa ctgccgattt acatcctgcc ctgcttcctt tggataggca tcatcccctt
     4981 taccttcgca ctcaggctga aaccgtcgcc cgacttttac cacgatgccg ccgccgcggc
     5041 cggcctgatt gtcctgttgt tcctcacggc aggaaaaaag ctgtttgatg tcaaaatccc
     5101 cgccatcagc ttcctcctgt ttgcaatggc ggcattttgg tggcttcagg cacgcctgat
     5161 gaacctgatt tatcccggaa tgaacgacat cgcctcttgg gttttcatct tgctcgccgt
     5221 cagcgcgtgg gcctgcaaga gtttggtcgc acactacgga caagaacgca tcgttaccct
     5281 gtttgcctgg tcgctgctta tcggctccct gcttcaatcc tgcatcgtcg tcatccagtt
     5341 tgccggctgg gaaaacaccc ccctgcttca aaacatcatc gttcacagag ggcaaggcgt
     5401 aatcggacac atcgggcagc gcaacaacct cggacactac ctcatgtggg gcatactcgc
     5461 ctccgcctac ctcaacggac aacgaaaaat ccccgcagcc ctcggcgcaa tctgcctgat
     5521 tatgcagacc gccgttttag gtttggtcaa ttcgcgcacc atcttgacct acatagccgc
     5581 catcgccctc atccttccct tctggtattt ccgttcggac aaatccaaca gacggacgat
     5641 gctcggcata gccgcagccg tattccttac cgcgctgttc caattttcca tgaacgccat
     5701 tctggaaacc tttacaggca tccgctacga aactgccgtc gaacgcgtcg ccaacggcgg
     5761 tttcacagac ttgccgcgcc aaagcgaatg gaataaagcc cttgccgcct tccagtccgc
     5821 cccgatattc gggcacggct ggaacagttt tgcccaacaa accttcctga tcaatgccga
     5881 acagcacacc atacacgaca acttcctcag caccttgttc acccattccc acaacatcat
     5941 cctccaactc cttgcagaaa tggggatcag cggcacgctt ctggttgccg caaccctgct
     6001 gacgggcatt gccgggctgc tgaaacgctc cctgaccccc gcatcacttt tcctgctgtg
     6061 cgcgcttgcc gtcagtatgt gccacagtat gctcgaatat cctttgtggt atgtctattt
     6121 cctcatcccc ttcggactga tgctctttct gtcccccgca gaggcttcag acggcatcgc
     6181 cttcaaaaaa gccgccaatc tcggcatact gaccgcctcc gccgccatat tcgcaggatt
     6241 gctgcacttg gactggacat acacccggct ggttaactcc ttttcccccg ccgctgacga
     6301 cagtgccaaa accctcaacc ggaaaatcaa cgaactgcgc tatatttccg caaacatccc
     6361 gatgctgtcc ttttatgccg acttctccct cgtaaacttc gccctgccgg aataccccga
     6421 aacccagact tgggcggaag aagcaaccct caaagcacta aaataccgcc cctactccgc
     6481 cacctaccgc atcgccctct acttgatgcg gcaaggcaaa gttgcagaag caaaacaatg
     6541 gatgcgggca acacagtcct attaccccta cctgatgccc cgatacgccg acgaaatccg
     6601 caaactgccc gtatgggcac cgctgctgcc cgaactgctc aaagactgca aagccttcgc
     6661 cgccgcgccc ggccatccgg aaacaaaacc ctgcaaacga cccgcgtcgg cggatgcgga
     6721 taccgcccga aatgtaaagc tccatgcaag acattgcaaa aaacagcaaa ccggtaggga
     6781 aatacgctat caaaaaacat tgcagccgtg ttaagataaa ctgtcaaaca atcttttcac
     6841 gccacgcccg aaacagggtc ggggcatacc cttacgaaaa ggaaacacca tgagccgcgt
     6901 attactcgta gatgacgatg ccctgctgac cgaactgctg accgaatacc tgagcgccga
     6961 aggtctgaac gtccgcagcg ttcccgacgg ggaagcaggc gtacaggaaa tcctgagcgg
     7021 gcaatacgat gtagtcgtat tggattccat gatgcccaaa atgaacggct tggatgtctt
     7081 gaaaaacgta cgcgcccgaa gcaccgtccc catcatcatg ctgaccgcca aaggcgacga
     7141 catcgaccga atcatcggct tggaaatggg tgcggacgac tatgtcccca aaccctgcac
     7201 accacgcgaa ctcttggcac gcatcaatgc catcctccgc cgagcacaac acagcggcga
     7261 acagaacaac gcacccaaca gcatctccgt cagcgatgtc gtcctatacc ccgccaaacg
     7321 ccaggcatcc gtcaaagaca tgccgctcga actgaccagc accgaattca acctgctcga
     7381 agtcctgatg cgccatgccg gacaggtagt cagcaaagaa accctgtccg tcgaagcact
     7441 cgaccgcaaa ctggcaaaat tcgaccgcag tatcgacgta cacatctcca gcatccgcca
     7501 caagctgggc gatgcctccc tgattcaaac cgtacgcggc ttgggctacc tgtttgtcaa
     7561 aaactgaagc agcgggcaaa tgaaactgtt ccaacgcatt ttcgccacat tttgcgcggt
     7621 tatcgtctgc gcaatctttg tggcgagttt ttctttttgg ctggtgcaga acacccttgc
     7681 cgaaaaccaa ttcaaccaac gccgcaccat cgaaaccaca ttgatgggca gcattatttc
     7741 cgcattcaag acacggggcg acaacggcgc gcgcgaaatc ctgaccgaat ggaaaaacag
     7801 ccccgtctca tccgccgttt acgtcataca gggcgacgag aaaaaagaca tcttaaaccg
     7861 ctatatcgac aattacacca tagaacgcgc ccggctgttt gccgccaaca acccccattc
     7921 caaccttgtc cgcatcgaat acgaccgttt cggcgaagaa tacctgttct tcattaaagg
     7981 ctgggacaac caccaggcac aacgcctgcc cagcccgctg tttatcccgg gcctgccgct
     8041 tgccccgatt tggcacgaat tcatcatcct ctccttcatc atcattgtcg gactgctgat
     8101 ggcatatatc cttgccggca acattgccaa acccatcaga atcttaggca acggcatgga
     8161 cagggtggca aacggagaac ttgaaacccg catctcccaa caggtcgacg accgcgacga
     8221 cgaattgtcc catcttgcca tccaattcga caaaatggcg gaaaaactcg aaaaacttgt
     8281 cgccaaagaa cgttacctac tccaccacgt ttcccacgaa atgcgctccc cgcttgcccg
     8341 tatgcaggca attgtcggac tgattcaggc acagccccaa aaacgggagc aatatctcaa
     8401 acggctggaa ggcgaactga cccgcatgga tacgctggcc ggggaactgt taaccctgtc
     8461 ccgcctcgaa acctccaata tggctttgga aaaagaaagc ctgaaactcc tgcccttcct
     8521 gggcaacctg gtagaagaca accaaagtat cgcccaaaag aacggacaga cggtcgccct
     8581 gtctgccgac ggaaaaatcc ccgaaaacac aaccatcctt gccaacgaaa gctacctgta
     8641 ccgcgccttc gacaacgtca tccgcaacgc cgtcaactac agccccgaag gcagcaccat
     8701 cctgatcaac atcggacaag accacaaaca ctggataatc gacgttaccg acaacggccc
     8761 cggcgtggac gaaatgcagc tcccgcacat cttcaccgct ttctaccgtg cagactccag
     8821 tgccaacaaa cccggaacag gactggggct tgcattgacc caacatatta ttgaacagca
     8881 ctgcggcaaa atcatcgccg aaaacatcaa accgaacggt ctgcggatgc gctttatcct
     8941 gcccaagaaa aaaaccggtt tcaaaacaga aaaaagtgcg aactgaccat aatgccgtct
     9001 gaacccgctt cagacggcat tgcacaaaca gttaccccaa aacaaacaca cagcgggtgc
     9061 atctccaaaa atcacgcaca taccgtccgc aaaggaatat atcatgccgg cacaaaccga
     9121 tccgggctac ttcttcatgc ccaaccacat tatcctgata ggcgcgagcg aacaaccgta
     9181 cagcctgggt gaacgcgtac tcagcaacct gctgagtacg ccctttcaag gaaaaatcac
     9241 ccccgtaaac ccgcgccacc acaccatagc cgggcttccc gcctacacca gcctcaacaa
     9301 aatccccggc agtgcagacc tgattattgc cgttaccccg cccgacagtt acgacaccct
     9361 cctcaaaacc tgccgtaaaa agcagctccg acacatcatc ctcatacagg actgggacag
     9421 cctgtctgcc gcagaactgc acaccgccga aactgccatc cgcaaacacc acggcaacgg
     9481 actcaacatc accgcctgca ccaccgcagg catccaactg ccctcactcg gactcaacat
     9541 cagtacccaa gacggatatg ccgcaggcca taccgccata ctgaccggca atgccgccgt
     9601 cagccgccaa atcgacaaca tcctgaacaa actccgtcaa ggcacatccc gccacatcag
     9661 cctgcatccc ggcatcagcc ccatcacatc cgccgattgg ctcaaccgct tcggacacag
     9721 cctgcacacc aaaaccgccg tcctacacca caaccctgaa gaggatcagc gcaggctgtt
     9781 cagcgcaatc cgccaattta cccgccatac gccgctgatt ctccacatca cctgcctcac
     9841 gacagaaacc gaccgtgccg tactgcactg cctcgcccga cactgcaact tcctcatcag
     9901 tttcaacgcc gacgacctcg aagccgcact gagcgcccaa ctgtccgacc ttccacccct
     9961 gtcccgactc gacatcctgt ccgacacgcc tgccgaatgg ctgcacgcgc acgcaccaaa
    10021 aaacctcacc ctccactttc ccaaccttcc ccaccacatc cgcaacggac acctgaccgg
    10081 cacacccaca ccctcaatct gccacgacat cgcctcacgt cagcttgccc gccccgacac
    10141 ccaagccgtc ctgaccatcc tcggtccctc cggacacgag gattacaaaa aaacagcacg
    10201 cgcccttatc cgcctgtccg aacagaccgc caaacccctg ctcgtcagca gccccttttc
    10261 agacggcata acacatttcg acacccccgc acaggcaatc cgcacccttt cctaccgtaa
    10321 caccgccgcc gccctgaaac aggcacagct cgacattgca ccgccgcagc catgccgtct
    10381 gaaaacaccg caaccccaaa acatcaaaaa agcccttgca gcggcaaatc ccgccctgct
    10441 cgccgaagcc ctgcacctcc ccctaccggc acaccaccca taacgccgtc caattccaat
    10501 tcggcagcca ccccctctat ggcgacatcc tgaccgcacg ctgcaacgga caaaccactg
    10561 ccgtactccc gccgtttacc acgctcgaca gccgccacct tgcccgcttt gccgaactcg
    10621 acggcacaca aaccctcgac cagttcctgc acacactgac cgtcattccc gaataccgcc
    10681 aacacatttt cggcatcacc ctcaacctca acggcggaca atacagcagc gatttcatct
    10741 taaagacacc cggaacacac gacacgccca aacgcaagaa cacaggcaaa gccgcccaaa
    10801 ccctcgaaca tgccgccgca aaaatgcaga gtgccgccgc atacctggaa cacaaaaacc
    10861 cgacagccgc cgaatttctc cgccacacaa gcgaagccgc cgcagaactg ctcggcagca
    10921 aaaccgaaac cggagcagcc gtacccaacg tacttgcccc ctatcccgca gcacacccca
    10981 aaacactgtc cctaaaaaac aacacgaccg ttaccattat ccccctttta cccgaagacg
    11041 cagaagccaa acagcagttc gtccgcagcc tcggccccga agcacggtac acacgcttca
    11101 tgacccacac caacgaactg cccgcagcca cgttggcacg cctgtgcaac cccgattacc
    11161 actgtgaacc gcatggacgg caagggatgc cgacagcaac atcgtcgccg tcgtccgcca
    11221 cagccgcctg aaccgcaacg aatgcgaatt tggcatcaca ctggcggaac atatgcgcgg
    11281 cagcgggctg gcacagaaaa tgatggaact catcatccaa accgccgcac agcaaggcta
    11341 cctgagcatg agtgccgaca ttctcaaaac caataccccc atgatcaaac ttgctgaaaa
    11401 atcaggattt accctcaagg aatcggacac cgaaaaaaac ctgtaccgcg catatctgaa
    11461 ccttgcggca gacaaaacaa caggaaaaac aaataaaaac ttgcgcaccg gccacaaaat
    11521 aacctaaaat cggcagtttc catatatccg attttctcaa aaggactcaa aatggtagtt
    11581 atccgtttgg cacgcggcgg ctcgaaacac cgccccttct acaacgtcat cgttactgac
    11641 tcacgcagcc gccgcgacgg ccgcttcatc gaacgcgtag gcttctacaa ccccgtagcc
    11701 aacgaaaaac aagagcgcgt ccgcctcaat gcagaccgcc tgaaccactg gattgcacaa
    11761 ggcgcgcaag tcagcgactc cgttgcaaaa ctgattaaag aacaaaaagc cgtctaatcc
    11821 gcgtttgccg ccatgacaga cgctcaaaac cgggtagcca tgggctacat caaaggcgta
    11881 ttcggcataa aaggctggct gaaaattgcc gccaacaccg aatattccga cagccttttg
    11941 gactaccccg agtggcattt ggccaaggac ggcaaaaccg tcagcgttac ccttgaagcc
    12001 ggaaaagtcg tcaacggcga actccaagtc aaattcgaag gcatagacga ccgcgattca
    12061 gcattctcat tgcgcggtta caccatcgaa ataccccgtg aagcattcgc cccgacagaa
    12121 gaagacgaat actactgggc agacttggtc ggcatgaccg tcgtcaacaa agacgatacc
    12181 gttttaggca aggtaagcaa cctgatggaa accggcgcaa acgacgtatt gatgattgac
    12241 ggagaacacg ggcagattct gattccgttc gtttcccaat atatcgaaac cgtcgatacc
    12301 ggcagcaaga ccattactgc cgactggggt ttggactact gatgcttatc caggcagtta
    12361 ccattttccc cgaaatgttc gacagcatta cccgctacgg cgtaacggga cgcgcgaaca
    12421 gacagggaat ctggcagttt gaagcagtca atccccgaaa gtttgccgac aacagattgg
    12481 gctatatcga cgaccgcccg ttcggcggcg gtccgggaat gattatgatg gctccgccgc
    12541 ttcatgcggc gatagaacac gccaaagcac aatcttccca aaccgcaaaa gtcatctacc
    12601 tcagccccca aggaaaaccg ctgacacacc aaaaagcggc agaactggca gaacttacgc
    12661 atctgattct gctgtgcgga cgctatgagg gaatagacga aagactgctg caaagcagcg
    12721 tcgatgaaga aatcagcatc ggagacttcg tcgtttccgg cggagagctt cccgccatga
    12781 tgctgatgga tgcggtattg aggctcgtac ccggcatatt gggcgacatt cagtctgccg
    12841 aacaggattc gttctcaagc ggtattttgg actgccccca ctacaccaaa cccttagaat
    12901 ttcaaggcat ggctgttccg gaagtattgc gctccggaaa tcatggcttg atagcggaat
    12961 ggcggttgga acaatcgctg cgccgcacct tggagcgcag acccgatctt ttggaaaagc
    13021 gcgttttaat cccaaaggaa tcccgcctct tgaataaaat cctacaagag caacgggaaa
    13081 tccaatcata atttaggaaa aaacaatgaa cctgattcaa cagctcgagc aagaagaaat
    13141 tgcccgcctg aacaaagaaa tccccgaatt cgcaccgggc gacaccgtag tcgtatccgt
    13201 acgcgtcgtg gaaggtaccc gcagccgtct gcaagcctac gaaggcgtgg ttatcgcccg
    13261 tcgcaaccgt ggtttgaaca gcaacttcat cgtccgcaaa atctccagcg gcgaaggtgt
    13321 tgaacgtact ttccaactgt attcccctac tgttgagaaa atcgaagtca aacgccgtgg
    13381 cgacgtacgc cgtgccaaac tgtactacct gcgcggtctg accggcaaag ctgcacgcat
    13441 caaagaaaaa ctgcctgcac gcaaaggttg attcaaaccg ttttccccca atgccgtctg
    13501 aacgttcaga cggcattttt tattgccgcg atgccggcaa ggcaacgata tgcctgaccc
    13561 tcatccacct taattaacaa tcactcccgc ctattcaagc agaatttaca gactaaacgt
    13621 tatacagtat catatccgcc atataacgat aaccgctttg ccaacttccc tttcaaaact
    13681 gcaaatcatt atgacacctt ccctcttact gtcaggattg accttccgac tcttcctcgc
    13741 cctgattgcc gtattccttt tatggggtgt ttacctttgg gcggtatcgg tatgagcatc
    13801 atcgttgaaa acctgacggt cagctaccgc cgccgccccg ccgtacacca cgtcgacatt
    13861 acttttgaag aacatagtat gtgggcggtt ttcggtccca acggcgcagg aaaatctacc
    13921 tttctcaaat ccttaatggg attgcagcct atcgatacgg gcagcatccg gctggacgga
    13981 ttgaccagtc aaaacattgc ctatctcccc caacaatccg acatcgaccg ttcccagcct
    14041 atgaccgttt tcgacttggc ggcaatgggg ctgtggtatg aaatcggttt tttcaaaggg
    14101 ataaataccg ctcaaaaaca acgcgttcac gaagccttgg agcgtgtcgg tatgcggcag
    14161 tttgcccgcc gccaaatcgc ccacctctca aacggacaat tccaacgcgt ccttttcgcc
    14221 cggatgctgg ttcaaaatgc aaaattcctg cttttggacg aacctttcaa tgctgttgat
    14281 gcacggacaa cctacgagct tctcgacgtg ttgcaaaaat gccattgcgg cggacacgct
    14341 atcattgccg ttttgcacga ttacgaacaa gtccgtgcct actttcccaa taccctgctg
    14401 ctcgcccgcg aaaaaattgc ggcaggcgca accgagacca ttctgacaga atcctacctc
    14461 gcccaagcca gcgccaaaat gcagcaacag gaaagccccg actggtgcgc ctcataaata
    14521 ctgcccgaaa ccacgcccca caccagacac catgaacctc tacgacctgc tccttgcccc
    14581 ctttgcagaa ttcgacttca tgcactacgc cctcgcatcc gtcttctgcc tgtccctcag
    14641 cgccgcaccc gtcggcgtat tcctcgtcat gcgccgtatg agcctgatag gcgacgcatt
    14701 gagccacgcc gtcctgcccg gtgccgccgt cggctacatg tttgccggct tgagcctgcc
    14761 cgctatgggt gtgggcgggt ttgccgccgg tatgctgatg gcgctgcttg ccggactcgt
    14821 cagccgcttt accaccctga aagaagatgc caactttgcc gccttttacc tgagcagcct
    14881 cgccatcggc gtaatcctca tcagcaaaaa cggcagcagc gtcgatttac tccacctcct
    14941 tttcggatct gtgcttgccg tcgatattcc cgcactgcaa ctcatcgccg ccgtctccgg
    15001 cctcacgctc attacccttg ccgtcatcta ccgccccctg gtgctagaaa gcatagaccc
    15061 cctgttcctc aagtccgtca acggcaaagg cgggctttgg cacgtcgttt tcctcatcct
    15121 cgtcgttatg aacctcgtat ccggcttcca agctctcggc accctgatgt cggtcggact
    15181 tatgatgctg cccgccatta ccgcccgctt atgggcaaga aatatgggga cgctcattct
    15241 gttgtccgtc ctcatcgccc ttttttgcgg tttgatcggg ctgctcattt cctaccacat
    15301 cgaaatccct tccggccccg ccatcatcct ctgttgcagc gtcctttatc tcttttccgt
    15361 catactcggc aaagaaggcg gcatcttgcc caaatggttc aaaaaccacc gccaccacac
    15421 cacctgaccc cgcaagccgc ttgaacaaac aggcggcttg ttttaccata atgaatgtta
    15481 tgttatatca cagaagaaca gttatgaaac acctcaaact cacccttatt accgcattgc
    15541 tggccaccgc cgcaactgcc gcaccccttc cggttgtaac cagtttcagc attttaggcg
    15601 acgtagccaa acaaatcggc ggtgagcgcg tagccgtaca aagcctcgtc ggagccaacc
    15661 aagatactca tgcctatcac atgaccagtg gcgacattaa aaaaatccgc agtgcaaaac
    15721 tcgtcctgct caacggcttg ggacttgaag ccgccgacat ccaacgcgcc gtcaaacaga
    15781 gcaaagtatc ctatgccgaa gcgaccaaag gcatccaacc cctcaaagcc gaagaagaag
    15841 gcggacacca tcacgaccac gatcatgacc acgaaggaca ccaccacgac cacggcgaat
    15901 atgaccccca cgtctggaac gaccctgttc ttatgtccga ctatgcccaa aacgtcgctg
    15961 aagccctgat aaaggccgat cccgaaggca aagtttatta tcaacaacgc ttgggcaact
    16021 accaaatgca gcttaaaaaa ctgcacagcg acgcacaagc cgcatttaat gccgtccctg
    16081 ccgccaaacg caaagtcctg accgggcacg acgcattttc ctacatgggc aaccgctaca
    16141 acatcagctt catcgccccg caaggcgtga gcagcgaagc cgagccgtcc gccaaacaag
    16201 tcgccgccat catccggcaa atcaaacgcg aaggcatcaa agccgtattt accgaaaata
    16261 tcaaagacac ccgcatggtt gaccgcatcg ccaaagaaac cggcgtcaac gtcagcggca
    16321 aactgtattc cgacgcactc ggcaacgcgc ccgcagacac ctacatcggc atgtaccgcc
    16381 acaacgtcaa agccttgacc aacgcgatga agcaataaaa ccgtttgatt ggtttgaatt
    16441 tgaaaaggca aaaggccgtc tgaaaattaa atacgaggtt ttcagacggc cttctcttgt
    16501 gcaataaagc agtaaacaaa t
//
LOCUS       DAXGCP010000050        16496 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.050, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000050 DAXGCP010000000
VERSION     DAXGCP010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16496
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.050"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..926)
                     /locus_tag="ACFJCW_001342"
     CDS             complement(<1..926)
                     /locus_tag="ACFJCW_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HFC4151469.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGTPLFERKSTPLRFTPVGERLLRLAHELIPQVAVAERDLARITEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQSSIS
                     FHPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1055..1804
                     /locus_tag="ACFJCW_001343"
     CDS             1055..1804
                     /locus_tag="ACFJCW_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HFC4151470.1"
                     /translation="MVLRRDFLAWCDETLQTASFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     VHPILGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVAI
                     GNPEREIRRVAWCTGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            1927..2508
                     /gene="petA"
                     /locus_tag="ACFJCW_001344"
     CDS             1927..2508
                     /gene="petA"
                     /locus_tag="ACFJCW_001344"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HFC4151471.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            2527..3876
                     /locus_tag="ACFJCW_001345"
     CDS             2527..3876
                     /locus_tag="ACFJCW_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HFC4151472.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIIAFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            3891..4679
                     /locus_tag="ACFJCW_001346"
     CDS             3891..4679
                     /locus_tag="ACFJCW_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HFC4151473.1"
                     /translation="MKQAMKNWFAALLSAVPMSAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRTGYVVMIFLLAVMLPLAYFLKKEYWKDVH"
     gene            5011..6801
                     /gene="rmuC"
                     /locus_tag="ACFJCW_001347"
     CDS             5011..6801
                     /gene="rmuC"
                     /locus_tag="ACFJCW_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HFC4151474.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFAGLNAQLAEKAA
                     RCDFVEQAHGKTVSELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESARLK
                     QSYIELQEKAQGLAVENERLATQLGQERKAFAEQYALERQIRQRVETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAYLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADEAARELAAYIASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKAGKQ
                     LQRDLVERANEQTAFALGKPSEQEAADEAE"
     gene            complement(6869..7501)
                     /locus_tag="ACFJCW_001348"
     CDS             complement(6869..7501)
                     /locus_tag="ACFJCW_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HFC4151475.1"
                     /translation="MTLRYEILPVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLETHKVPVLGPHREDEFLLQSLPQTTAQYGFP
                     VSPAFAPNRWLEEGETLTVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFAFPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            7594..8418
                     /locus_tag="ACFJCW_001349"
     CDS             7594..8418
                     /locus_tag="ACFJCW_001349"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HFC4151476.1"
                     /translation="MIKKIIGGIIPIFTAVFIPASAGAADLMLAQEYKGQDIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQIKVRDRRHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            8487..9050
                     /locus_tag="ACFJCW_001350"
     CDS             8487..9050
                     /locus_tag="ACFJCW_001350"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HFC4151477.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGD
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKEKPVKADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALGGK"
     gene            9134..9571
                     /locus_tag="ACFJCW_001351"
     CDS             9134..9571
                     /locus_tag="ACFJCW_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HFC4151478.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEGQD
                     DIINNAISALQEFPENHGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMIKAV
                     QYSPAAEDFAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            9792..10061
                     /locus_tag="ACFJCW_001352"
     CDS             9792..10061
                     /locus_tag="ACFJCW_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HFC4151479.1"
                     /translation="MLKQSIEIINKLGLHARASSKFTQTASQFKSEVWVTKNGSRVNG
                     KSIMGLMMLAAAKGTVIELETDGLDEAAAMKALTDLINDYFGEGE"
     gene            10061..11836
                     /gene="ptsP"
                     /locus_tag="ACFJCW_001353"
     CDS             10061..11836
                     /gene="ptsP"
                     /locus_tag="ACFJCW_001353"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HFC4151480.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAQADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIISPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGEVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPSVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNAGQLEGDIAKVIRCEDE
                     EKSEKLIKQINSVSVAEEAEVKGRK"
     gene            complement(11963..12904)
                     /locus_tag="ACFJCW_001354"
     CDS             complement(11963..12904)
                     /locus_tag="ACFJCW_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC4151481.1"
                     /translation="MLELNGLCKCFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIRLNGENITCMPPEKRRISLMFQDYALFPHMSALENTAFGLKMQK
                     MPKAEAERLALSALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRDRLRRMTAERIRKGGIPAVLVTHSPEEACTAADEIAVMHEGKILQCGTPET
                     LIQTPAGVQVARLMGLPNTDDDRHIPQNAVCLDNHGTECRLLSLVRLPDSLRLSAVHP
                     EHGELTLNLTVGQHTDGISGNGTVRIRVDEGRIVRFR"
     gene            complement(12913..13788)
                     /locus_tag="ACFJCW_001355"
     CDS             complement(12913..13788)
                     /locus_tag="ACFJCW_001355"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HFC4151482.1"
                     /translation="MPTVRFTESVSKQDLDALFERAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERIKKDWEAGCSESSDGIFLNADGWPDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLVESNGRWHFWIGRRSPHKAVDPGK
                     LDNIAGGGVSGGEMPSEAVCRESSEEAGLDKTLFPLIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVAGFEKMDIGGLLDAMLSKNMMHDAQLVTLDAFYRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(13971..14047)
                     /locus_tag="ACFJCW_001356"
     tRNA            complement(13971..14047)
                     /locus_tag="ACFJCW_001356"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14011..14013),aa:Met,seq:cat)
     regulatory      14196..14295
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            14386..16287
                     /gene="thiC"
                     /locus_tag="ACFJCW_001357"
     CDS             14386..16287
                     /gene="thiC"
                     /locus_tag="ACFJCW_001357"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HFC4151483.1"
                     /translation="MTTPKKTAKISGNEARELSDLSEDIGIRFKYPNSERVYLQGSRD
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGAYGDPAAHIDLKQGLPHIRTAWLDE
                     RGDTEILPKLSSEYGIECAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPE
                     MEFAAIRERMKLDELFRRPEYAKLLKQHTGQSFGANIPTRPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQTLEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         3942 a         4339 c         4632 g         3583 t
ORIGIN      
        1 accggttcca actcacttaa tccgggcaag tccgcgaagc cgcgttcacg tatgatttgg
       61 caaaagttgt tcagataact tttatctgtg tcttcagtgc ggatggcggc atacagtttg
      121 ctttgcagtc cgtcggcagt aatttggcgg tggacgacat agcctttttc aaggtagggc
      181 atgactgtcc aatagggaag ggcggcaatg ccacgtctgc tggcaaccag ttggataatg
      241 gcgatggtca gctcgctgtg ccggcgcggc gggttgatgt ttttcggaat caggattttt
      301 ttgggtaaat ccagcatctc gtcgggaacg ggataggtaa tcagggtttc cccgataaag
      361 tcttccgccg tccaaacgtt tttggcggca agcggatggt ccggggcgca aatgccgacc
      421 atttcgtagg caaacagtgg gtggaagctg atgctgcttt gtttttcggc ttcggagaca
      481 atggcgaggt cggcgcggtg ttgcagcagc agcccgacgg gatccgcttg gaatcctgat
      541 acgatatcca gttcgacttg gggccacatc gggcggaatt cgcccatggc gggcatcagc
      601 cagtcgaaac aggtatggca ttcgacggca atccgcagct ctcccgcctc cccttccgtg
      661 attcgcgcca aatctcgttc tgcaacagca acttgaggta tcagttcgtg ggcgaggcgc
      721 agcagccttt cgcccaccgg ggtaaagcgc aggggcgtgg atttgcgttc gaacagcggc
      781 gtgccgtagt ggttttcgag catacggatc tggtgggaaa gggcggattg ggtaaggaaa
      841 acccgtttgg cggcaaggga gacgctgccg gtttcttcaa gtgccagcag ggttttgagg
      901 tggcgcaatt cgataatgga atccatgggg cttcagacgg catattgaac cggcgcatat
      961 taaaataatt catatgcggg tgcaaatcgg aaaaatgggc gtttcgggca tttgcggtta
     1021 gaatgcccgc ttgtttggaa atgacaggaa aaatatggtt ttgcgcagag attttttagc
     1081 ctggtgcgac gaaacgttgc agacggcatc gtttaaagat tacgccccca atggtttgca
     1141 ggttgaaggg agggaatata tcgggaaaat cgttacgtcg gtaacggcaa gcagggcagc
     1201 gattgatttt gctgtggagc agaaggcaga tttgcttttg gtacatcacg gtatgttctg
     1261 gaaaaacgag ctgccgaccg ttaccggttg gaaaaaagaa cggattgccg cactgttacg
     1321 gcacgacatc aatatggcag gctaccatct gcccctggat gtgcatccca tactgggcaa
     1381 caatgcccaa ctcgccgaca gattgggttt tgcgacagaa aaacggttcg gcgaacaaaa
     1441 cctgctcaac tcgggcagcc tgaaacaagc caagacactc ggcgcattgg cggcgcatat
     1501 tgaaacagtt ttgcaacgta agcctgtcgc catcggcaat cccgaacgcg aaatccgacg
     1561 ggttgcatgg tgtaccggcg gtgcacaggg cttttttcag acggcaatag atgaaggcgt
     1621 cgatctgtat ctgacgggtg aaatttccga agcccaatac cacctcgcca atgaaacggg
     1681 tacggctttc atttcggcag ggcatcacgc gacggaacgt tacggcgtac gcgcgctggc
     1741 agaatcggcg gcagaggttt tcgggttgga agtgtgccat tttgacgaaa acaacccggc
     1801 ttgagtcttg agaaatatca taaaacttta ccttatttta aataatgctt tgagtatcac
     1861 tgcaaactgg gtaaaattgc aatgtttaat ggctcggcat tcccaaaata ttaggacgac
     1921 tgaataatgg ataatcaaga aatcaacaac ggccgccgcc gtttcctgac acttgcgacc
     1981 tgcggcgcag gcggagtggc agcattgggt gtggcaacgc cgtttgtggc cagttttttc
     2041 ccttcggaaa aagccaaggc cgccggtgct gccgtcgaag tggatgtcag taaaatcgaa
     2101 gcgggtcagc tgctgaccgc cgagtggcaa ggcaaaccga tttgggtgct caaccgtaca
     2161 gatcagcagc ttaaagacct gaaaggcctg aacggcgaac ttaccgatcc caattccgat
     2221 gcggaacagc agccggagta tgctaaaaac gagacccgtt cgattaagcc gaacatcctt
     2281 gtcgccatcg gtatctgcac ccatttgggc tgctcgccca ccttccgtcc cgacattgcc
     2341 cccgccgatt tgggcgcaga ctggaagggc ggcttcttct gcccgtgcca cggttcgaaa
     2401 ttcgacttgg ccggccgcgt atataaaggt gttcctgccc cgaccaacct ggttgtcccg
     2461 ccatataaat acttgagcga cacaactatc ttggtgggcg aagactaaga ataaggaacg
     2521 ataattatgg caaaccaaac caatagcaaa gcaaaagcat tgttaggctg gatggacgct
     2581 cgcttccccc tgtctaaaat gtggaatgag catttggcgc aatactatgc gccgaaaaac
     2641 tttaattttt ggtactattt cggctcttta gccctgctcg tcctcgtgat tcaaatcgtc
     2701 agcggtattt tcctgacgat gaactacaaa ccggacggca acctgaatgc ctaccatctg
     2761 cctgctgcct ttaccgcagt agagtacatc atgcgcgacg tgtccggcgg ttggattatc
     2821 cgctacatgc attccaccgg cgcatctttc ttcttcattg ttgtttatct gcacatgttc
     2881 cgtggtttga tttacggttc gtacaaaaaa ccccgtgagt tggtgtggat tttcggttct
     2941 ttgatcttct tggcattgat ggcggaagcc tttatgggct acctgctgcc ttggggtcag
     3001 atgtcctttt ggggtgcgca ggtgattatc aacctgttct ccgccattcc cgtcatcggt
     3061 cctgatttgt ccacttggat tcgcggcgac ttcaacgttt ccgacgttac cctgaaccgc
     3121 ttcttcgccc tgcacgttat cgccgtaccg ctggtattgc tcggtttagt cgtggcacac
     3181 atcatcgcac tgcacgaagt gggctctaac aaccccgacg gtgtggaaat caagaaaaac
     3241 aaagatgaaa acggcattcc gcgcgacggc atcccgttcc acccttacta cactgttaaa
     3301 gacatcctgg gcgtcgttgt attcctgatt gtcttctgtg ccgtattgtt ctttgcccct
     3361 gaaggcggcg gctacttcct ggaagcgccg aacttcgatg cggcaaatgc gctgaaaaca
     3421 cccccgcaca ttgcgccggt atggtatttc acaccgttct acgccatttt gcgtgcgatt
     3481 ccttccttct tgggaacgca ggtttggggt gtaatcggta tgggcgcggc ggtcgtgttg
     3541 attgccctgc tgccttggct ggacaggggc gaggtgaaat ccgtccgtta ccgcggcccg
     3601 attttcaaaa ccgcattggt cttgttcatc attgccttta tcggtttggg tattttgggc
     3661 gcgatggtgg caaccgatac gcgtactttg gtcgcgcgca tcctgtcctt cgtctatttc
     3721 gcattcttcc tgggtatgcc gttctatacc aagctggata aaaacaaacc ggttcccgaa
     3781 cgcgtaacca tgagcaccgc caaacaaaaa atcatgttct ttgtttacgt cggcattact
     3841 gccgtgggtg cttacctgtt tgcaaccaac atctgatgag ggcagtcgaa atgaaacaag
     3901 ctatgaagaa ttggtttgct gccttgctgt cggcagtacc catgagtgcg gcatttgctt
     3961 cgggcggtca tgcacactat gagaaagtcg atatcgattt gcgcgaccaa gtaagcttgc
     4021 agcgcggcgc acaaatcttt accaactact gtttgtcctg ccactcggca agcggtatgc
     4081 gtttcaaccg tttgaaagac atcggtctga ctgacgaaga aatcaagaaa aacctgatgt
     4141 ttaccaccga taatgtcggc gatgtcatgc attcggcgat gaacccgaaa gatgcggcaa
     4201 aatggtttgg tgctgctccg cccgatttga cattgattgc gcgttccaaa ggtgcagact
     4261 acctttacgc ttatatgcgc ggcttctata aagatccgac ccgtccgagc ggctggaaca
     4321 atactgtatt cgataaagtc ggtatgcccc acccgttgtg ggaacagcaa ggcgttcaag
     4381 ccgttgagtt ggatgccaaa ggtcagccgg ttatggtaaa agacgaacac ggcgagatga
     4441 agcctaagct gtattgggaa tctaccggtt tgcacagccg ccgtctgcct aacggcaaag
     4501 tgatccagaa agagtacgac gcatatgtac gcgatttggt caattacctt gtgtacatgg
     4561 gtgaacctgc acaactgcaa cgcaaacgta caggttatgt cgtgatgatt ttcttgttgg
     4621 cggttatgct gcctttggca tacttcctga aaaaagaata ttggaaagac gtacactaag
     4681 cgtttggaac aaaagggcaa atcctttagg gtttgccctt tttgcatgct tctgcccttt
     4741 gggaaaatca gcacccggat gccgtctgaa catagctgca acatttcaga cggcatcatt
     4801 ctaaaaatgt caggcatcgg gaacttaatc agggtttgtg gcagattgat attgaattag
     4861 gaaaaggtct gaaaccgcaa gcagcatggt aaggcgatgt cgaacaggtt taaagccaat
     4921 ccgctatatt ttttggagct gcaccgtgca aacaggtaga atggcggcgg ttttgtccgg
     4981 tgtgaaaatg tttgaatatt aggatgattg atggagctga tgactgtttt gctgcctttg
     5041 gcggcgttgg tgtcgggcgt gttgtttaca tggttgctga tgaagggcag gtttcagggc
     5101 gagtttgccg gtttgaacgc gcaattggcg gaaaaggcgg caagatgtga ttttgtcgaa
     5161 caggcacacg gcaaaaccgt gtcggaattg gcggtgttgg acgggaaata ccggcatttg
     5221 caggacgaaa attatgcttt gggcaaccgt ttttccgcag ccgaaaagca gattgcccat
     5281 ttgcaggaaa aagaggcgga gtcggcgcgg ctgaagcagt cgtatatcga gttgcaggaa
     5341 aaggcacagg gtttggcggt tgaaaacgaa cgtttggcaa cgcagctcgg gcaggaacgg
     5401 aaggcgtttg ccgagcaata tgcgctggaa cgccaaatcc gccaaagagt cgaaaccgat
     5461 ttggaagaaa gccgccaaac tgtccgcgac gtgcaaaacg acctttccga tgtgggcaac
     5521 cgttttgccg ccgccgaaaa acagattgcc tatttgcagg aaaaagaggc ggaagcggag
     5581 cggttgaggc agtcgcatac cgagttgcag gaaaaggcgc agggtttggc ggttgaaaac
     5641 gaacgtttgg caacgcaaat cgaacaggaa cgccttgctt ctgaagaaaa gctgtccttg
     5701 ctgggcgagg cgcgcaaaag cttgagcgat cagtttcaaa atcttgccaa cacgattttg
     5761 gaagaaaaaa gccgccgttt taccgagcag aaccgcgagc agctccatca ggttttgaac
     5821 ccgttgaacg aacgcatcca cggtttcggc gagttggtca ggcaaactta tgataaagaa
     5881 tcgcgcgagc ggctgacttt ggaaaacgaa ttgaaacggc tccaagggtt gaatgcgcag
     5941 ctgcacagcg aggcaaaggc cctgaccaac gcgctgaccg gcacgcagaa caaggttcag
     6001 ggcaattggg gcgagatgat tctggaaacg gttttggaaa attccggcct tcagaaaggg
     6061 cgggaatatg tggttcaggc ggcatccgtc cgaaaagagg aagacggcgg cacgcgccgc
     6121 ctccagcccg acgttttggt caacctgccc gacaacaagc agattgtcat tgattccaag
     6181 gtttcgctga cggcttatgt gcgctacacg caggcggcgg atgcggatga ggcggcacgc
     6241 gaactggcgg cgtatatcgc cagcatacgc gcgcatatga aaggcttgtc gctgaaggat
     6301 tacaccgatt tggaaggtgt gaacacattg gatttcgtct ttatgtttat ccctgtcgaa
     6361 ccggcctacc tgctggcgtt gcagaatgac gcgggcttgt tccaagagtg tttcgacaaa
     6421 cggattatgc tggtcggccc cagtacgctg ctggcgactt tgcggacggt ggcgaatatt
     6481 tggcgcaacg agcagcaaaa ccaaaacgcg ctggcgattg cggacgaagg cggcaagctg
     6541 tacgacaagt ttgtcggctt cgtacagacg ctcgaaagcg tcggcaaagg catcgatcag
     6601 gcgcaaaaca gctttcagac ggcattcaag caacttgccg agggacgcgg gaatctggtc
     6661 ggacgcgccg agaaactgcg tctgttgggc gtgaaggcag gcaaacagct tcaacgggat
     6721 ttggtcgagc gtgccaacga acagacggca tttgctttgg gcaaaccttc ggaacaggaa
     6781 gcggctgacg aagccgaata ggaaaggcgg atgcgttttc agacggcatc agtgcagatg
     6841 atgccgtctg aagactttgg gaagtcggtt agaaaaacgg attgtgccgt ttttcgtgtc
     6901 cgatggaagt catacgcccg tgtccggcga caacttgcac ggtttcgggg aaggcgaata
     6961 atttgttgcg gatattgttg attaagtcgg cgtggttgcc gcgcggaaaa tcggtcctgc
     7021 ctatggtttc gtaaaacagc acgtcgcccg caatcagcag ctccgcttcg gcacaataga
     7081 aaaccacgtg tccgggcgtg tgccccggaa tatgcagcac ttggaaggca tagcgtccga
     7141 ccgtgagcgt ttcgccttct tcgagccaac ggttcggcgc aaaggcgggc gagacgggga
     7201 atccgtattg cgcggtggtt tgcggcagcg attggagcag gaattcatct tcgcggtgcg
     7261 ggccgaggac ggggacttta tgcgtttcca gcatctcgac cacgccgccc gcgtgatcga
     7321 gatgaccgtg cgtcagccag attgccgtga gcgtgagttt gcggtttgcc aacgcttgca
     7381 gcaggaacgg cacgtcgccg ccgacatcgg tcaggacggc ttcgccgctt tcgtcgtccc
     7441 aaatcagggt gcagttttgg cggaaggggg taacggggag aatttcgtaa cgtagggtca
     7501 tcggcgtgtt cctaaaacgg tttttcagac ggcatcgggt ttgccgtttg ttttatggcg
     7561 gtttgccgcc tgttttgata ttgggggaat caggtgatta agaagataat cggcggcatc
     7621 ataccgattt ttacggcggt tttcatccct gcatcggcag gcgcggcgga tttgatgctg
     7681 gcgcaggaat acaaagggca ggacattgcc ggctgggcga tgagcgagaa gctcgacggc
     7741 gtgcgcgcgt attgggacgg aaagcacctg ataagccgtc agggttatgc gtttacgccc
     7801 cccaaaggct ttaccgcgca gtttccgcct tatcctttgg acggcgaatt gtatagcgga
     7861 cgtggtcagt tcgagcagat ttccgctacc gtgcgttctg tttcttcaga ctggcgcggc
     7921 atccgcctgc acgttttcga tgtacccaag gcgcagggca acctctacca acgtttggca
     7981 gtcgcaacgc agtggctgaa aacgcatccg aacgcgccga ttaccatcat cccgcaaatc
     8041 aaagtgcgcg accggcggca cgcgatggac tttttaaaac aaatcgaagc gcagggcggc
     8101 gaaggcgtga tgctgcgcca gcccgaatcc cgttacagcg gcggcaggag cagccaatta
     8161 ttgaagctga aaagccaata cgacgacgaa tgcacggtaa cgcggcacta tgagggcaaa
     8221 gggcgaaacg ccggacggct gggcgcggtc ggctgcaaaa accgacacgg cgaattccgc
     8281 atcggcagcg gtttcaagga caaagaccgc gacaacccgc ccaaaatcgg cacgctgatt
     8341 acctaccgtt accgtggctt tacgcggaaa ggcacgccga aatttgccac atttgtgcgc
     8401 gtgcgtaccg accgctgagc aggacagttc agacggcatc cgatactttg gtttataatt
     8461 ttccttttac cgaccgattc cgacatatga ccgatttaga aaccaaacgc cttgaaacac
     8521 aggcgatgct tgaaaacgcc gatcttttgt tcgaccaagg ccaatgccgt gccgcactgc
     8581 aaaaagtggc ggacgagatt acgcgcgatt tgggggataa atatccgttg ctcctgcccg
     8641 tgatgggcgg ggcggtggtg tttacggggc agttgctgcc gctgttgcgc tttcccttag
     8701 actttgatta tgttcacgtt tcccgttacg gcgacaagct ggagggcggc gcgttcaact
     8761 ggaagcgtat gcctgatgcg gaacaaatcc ggggcaggca cgtggtcgtg ttggacgata
     8821 ttttggacga agggcatacg atgtccgcca ttcaagccaa acttttggaa atgggtgcgg
     8881 caagctgccg tgcggcggtg ttcgccaata aattaatcga caaagaaaaa ccggtcaaag
     8941 ccgattatgt cggactggat gtgccgaacc gttatgtttt cggttacggc atggatgcgg
     9001 caggctgctg gcgcaatctg ggcgagattt acgcattggg cggaaaataa gggatgcgat
     9061 gccgtctgaa ggcctttcag acggcatcgc gcccatacgc cggcaggatt aatgaggaac
     9121 aggacgcatc aatatgatag ggcttttaat catcacacac gaaaccatag gcgaagccta
     9181 ccgcaagctg gcgcatcatt tttttccggg cgggctgcct gaaaacgtcc gcatactcgg
     9241 cgtgcagccg acggaaggcc aagacgacat tatcaacaac gccatttccg cgctgcaaga
     9301 gtttcctgaa aaccacggtg tattgattat gaccgacatc ttcggcgcga ccccctgcaa
     9361 tgccgcccgc cggctcgtgc gcgaaaacaa atcggcgatt ttgaccgggc tgaacgcgcc
     9421 gatgatgatt aaggccgtcc aatattcgcc ggcggcggaa gactttgccg cctttaccga
     9481 atgcgtcagg gaggcggcgg taaaaggcat tttcgccatc acgtccgcgc ccgaagattt
     9541 ggtgtgccgg cgcagcggcg atgccgtctg aagaagcggc agggcaggaa aacattttaa
     9601 acggcgtctg ctgccgatat atagcggatt aacaaaaatc aggacaaggc ggcgggccgc
     9661 agacagtaca aatggtacgg aaccggttcg cctggtgctt cagcacctta gggaaccgtt
     9721 ccctttgagc cggggcgggg caacgccgta ctggtttttg ttaatccact atacataaca
     9781 cgggaaccga aatgctcaaa caatccatcg aaatcatcaa caaactcgga ctccacgccc
     9841 gcgcgtccag caagttcacc caaaccgcgt cccaattcaa aagcgaagtc tgggttacga
     9901 aaaacggcag ccgcgtcaac ggcaaaagca ttatggggct gatgatgctc gcagccgcca
     9961 agggtacggt catcgaactg gaaaccgacg gcttggacga agccgcagcc atgaaggcat
    10021 tgaccgactt aatcaacgac tacttcggcg agggcgaata atgagtatcg tgctgcacgg
    10081 cgtggcggcg ggcaaaggca ttgccgtcgg ttgcgcccac ctgattgcgc gcggtacgga
    10141 ggaagtgccg cagtatgatg ttgctcaggc ggacaccgat gccgaagccg aacgtttcga
    10201 tgccgccgtc aaagccacgc gcaaagagtt ggaacagctc cgcagcgcga ttcccgaaaa
    10261 cgccccgacc gagttgggcg cgttcatctc gctgcacctg atgctcttga ccgatgttac
    10321 cttgtcgcgc gaacccgtcg atattttaag ggaacaaaaa atcaacgccg agtgggcatt
    10381 gaagcagcag agcgacaaac tcgccgccca attcgacaat atggacgatg cctatttgcg
    10441 cgaacgcaag caggatatgc tgcaagtcgt ccgccgcatc cacaacaacc tgatcgggca
    10501 gggcaacgag ttggaggttg ccgacaacct gtttgacgaa accgttctga ttgcaaacga
    10561 cctttcaccc gccgacacgg ttttgtttaa agagcagcgc attgccgcct tcgttaccga
    10621 tgccggcggc cccaccgggc atacggcgat tttgggcagg agcttggaca tcccgtccgt
    10681 cgtcgggctg cacaacgcgc gcaaactgat taccgaaggc gaaacggtca tcgtggacgg
    10741 catcaacggc gtgttgatta tttcgccgga tgagtcggtg ttgaacgaat accgccgccg
    10801 cgcccgcgaa taccgcagcc acaaacgcga tttgaacaag ctcaaaaaaa ccgccgccgc
    10861 caccgccgac ggggtctgca tcgagcttgt gggcaatata gaatccgccg aagacgtgaa
    10921 accgctgcac aacctcggcg cagacggcat cgggctgttc cgcagcgagt ttctttacct
    10981 gaaccgcgat acgatgccgt ctgaagacga gcagtacgaa gtgtacagcg cgattgtcaa
    11041 aaaaatgaag ggcaaaagcg taacgatacg gacagtcgat ttgggtgtgg acaaaaatcc
    11101 gcgctggttc gggaaaaaca gcacgcccaa cggcagcctc aaccccgcgc tgggcatgac
    11161 cggcatccgc ctgtgccttg ccgaaccggt catgttccgc acgcagatgc gcgccatcct
    11221 ccgtgcggcg gtacacggcc ccgtccgcat gatgtggccg atgattacct ccgtatccga
    11281 agtgcgccag tgcctcatcc acctcgacac cgcgcaacgc cagcttgccg aacgcggcga
    11341 tgccttcggc gaagtcggca tcggctgcat gattgaaatt ccgtctgccg cgctgaccgt
    11401 cggcagtatt ttgaaactgg tcgatttcat ctccgtcggt accaacgatt tgatccaata
    11461 tattctgtcc gtcgatcgcg gcgacgacag cgtcagccat ctctaccaac ccggacatcc
    11521 ttccgtgctg aaaatgctgc aacacgtcat ccgtaccgcc aaccgcatgg acaaagacgt
    11581 gtccgtatgc ggcgagatgg cgggcgatac cgcgtttacc cgcgttttat tgggtatggg
    11641 gctgcgccgt ttttccatga atccgaacaa catcctgccc gtcaaaaaca tcattctgca
    11701 cagcaatgcc ggacagctcg aaggcgatat tgcgaaagtc atccgctgcg aagacgaaga
    11761 gaagtcggaa aagctgatca aacagatcaa cagcgtgtct gtcgcggaag aagccgaagt
    11821 caagggacgg aaataaatat tgttgacaat gcgagcgggt tgcagtcaaa taacgccctt
    11881 aaaaaataca gctgctttgg tcaagaaatg ccgtctgaaa aattttcaga cggcattttg
    11941 tttggcaggc atttctgccg catcatcgga aacggacgat acgcccttca tcgacgcgga
    12001 tgcggaccgt accgtttccg gaaataccgt ccgtatgttg tccgacagtc aggtttaagg
    12061 tcagctcgcc gtgttcggga tggacggcgg aaagccggag cgagtcgggc aggcggacga
    12121 gggacagcag gcggcattcc gttccatgat tgtccaagca cacggcattt tgcggaatat
    12181 ggcggtcatc gtcggtattg ggcagcccca tcagacgggc gacctgcacg ccggcaggcg
    12241 tttgaatcaa ggtttcgggc gtaccgcatt gaaggatttt cccctcgtgc atgacggcga
    12301 tttcgtccgc cgccgtgcag gcctcttcgg gcgaatgcgt taccaaaacg gcagggatgc
    12361 cgcccttgcg gatgcgttcg gcggtcatac ggcgcagccg gtcgcgcaaa tgcgtgtcca
    12421 aactggaaaa cgattcatcc agcaacagca gggaagggcg gacaaccaaa gcgcgcgcca
    12481 gtgccaaccg ttgcttctcg cctccggaaa gtttttcagg cttgcggtgc gcctcgtttt
    12541 ccagcccgac ttcggcaagt gccgacaagg cgaggcgttc ggcttcggct ttcggcattt
    12601 tttgcatttt caaaccgaat gccgtatttt ccagcgcact catatgggga aacagcgcgt
    12661 aatcttgaaa catcagcgag atacggcgtt tttcgggcgg catacaggta atgttttccc
    12721 cgttcagccg aatttcgccg ccgtccggcc ggacgatgcc cgcaatcata ttcagcaggg
    12781 tggatttgcc gcagcccgac cgccccagta cggcgagtat tttgccgcgc ccgacagtca
    12841 ggcagatgtt gtcggcgacc gttttgccgc cgaagcattt gcagagtccg ttcagttcaa
    12901 gcatggcgca tcctataaac gtatgccgtc cagccactcg gacagcggat gggcggcatc
    12961 aatcagaccg taacggtaaa acgcgtccag cgtaaccagt tgcgcgtcgt gcatcatgtt
    13021 tttcgacaac atggcatcca ataggccgcc aatgtccatc ttttcaaaac ccgctacctc
    13081 gccatcctga ttttcaggca ggaaggtttc gggcaggacg gcatcgaaca catacaggat
    13141 ttcattgtgc acacctcggc tgacggggcg aaggctgtgc agccgcgata ctgggcggat
    13201 gagcggaaac agcgttttat ccaaaccggc ttcttcgctg ctttcgcggc acacggcttc
    13261 agacggcatt tcgccgccgg aaacaccgcc gccggcaata ttgtcgagct tgccgggatc
    13321 gactgctttg tgcggactgc gcctgcctat ccaaaaatgc catctgccgt tcgattcgac
    13381 caaaccgttg agatggacgg cgcggctgag tagtccgaac ggacggaaag cggcgcgttc
    13441 gagcgtgaac aaggggttgc cgccgccgtc ggtcaggtcg aaacactcgt tgcgccatcc
    13501 gtgaagcagc cccgccttgt tccatgtgcg ggcgaggtgc tgcaagcgtc cgcccatatc
    13561 cggccagccg tccgcattca gaaaaatgcc gtctgaagac tcggagcagc ctgcctccca
    13621 gtcttttttg atgcgctcag cccattccgg cgacagattg cccaaaggaa gacggttcag
    13681 atacagcgtt ttccagcaac tttcggcacc gtaacttgct tttgcccgct cgaacagggc
    13741 atcaaggtct tgtttgctga cggattcggt aaaacggacg gtcggcatag ccggctttct
    13801 tgaacacaat gcggaagatt gtagccaaac cgcctgaatt tgcaaccgca aacagacggc
    13861 ggcctgccgt tccgatattg cggcaggaag gaaaatccgg caaaaaacgg aggcggcagg
    13921 aaacaggaaa aacaaaaccc cctcggcatt gaaccgaggg gtttgatatt tggttgcggg
    13981 agcaggattc gaacctacga ccttcgggtt atgagcccga cgagctacca tgctgctcca
    14041 tcccgcgtca gaagatgaaa ctatacggca gattttttat gttgtcaaac attatttccg
    14101 tgaaaaatca taaagttttc cgtccggcgg cttatgcctg atttgaaata tcattttctt
    14161 tacaaaagtt catgttcgtg atttaatttt ggttaacatc gaaacagggg tgctgcctga
    14221 tgttcaggcg gctgagaaat accctttaca cccgatcggg ataatacctg cgtggggagt
    14281 tttcacggat tctgtctttc agacggcatt ggttttcaaa tgccgtctga aaacgcaaaa
    14341 cgctcctgtt tctttattct aaacgagaaa acaggagcat tttttatgac tacgccaaaa
    14401 aaaaccgcca aaatttccgg caacgaagcg cgcgaacttt ccgacttgag cgaagacatc
    14461 ggcatccgct tcaaatatcc gaactccgaa cgcgtgtatc tgcaaggcag ccgcgacgac
    14521 atccgcgtac ctttgcgcga aatccgtcag gacgacacct acacggcgca aggtacggaa
    14581 gccaacccgc ctattccggt gtacgacacc agcggcgcat acggcgatcc ggcggcgcac
    14641 atcgacctga aacaaggcct gccgcacatc cgcacggcgt ggctggacga acgcggcgat
    14701 accgaaatcc tgcccaaact ctccagcgaa tacggcatcg aatgcgcaca cgatccgaaa
    14761 accgcccatc tgcgcttcaa ccaaatcacc cgcccgcgcc gtgccaaagc cggccgcaat
    14821 gtaacccagc tccattacgc ccgccaaggc attatcacgc ccgaaatgga gttcgccgcc
    14881 atacgcgaac gcatgaagct ggacgagctt ttcagacggc ctgaatacgc caagctcttg
    14941 aaacagcaca cagggcaaag tttcggtgcg aacatcccga cccgtcccga ccaaatcacc
    15001 cccgaattcg tgcgccaaga aatcgccgcc ggacgcgcga tcatccccgc caacatcaac
    15061 caccccgaac tcgaaccgat gattatcggc cgcaacttcc gcgtcaaaat caacggcaac
    15121 ttgggcaatt ccgccgtaac ctccagcctg accgaagaag tcgaaaaaat ggtgtggtcg
    15181 ctgcgttggg gcgcggacac gattatggac ttatccacag gcgcgcacat ccacgaaacg
    15241 cgcgaatgga ttatccgcaa cgcgcccgtc cccatcggca cagtgccgat ttaccaaact
    15301 ttggaaaaaa ccggcggcat cgccgaagat ttgacttggg atttgttccg cgacacctta
    15361 atcgagcagg cggaacaagg cgtggactat ttcaccatac acgcgggcgt gttgctgcgt
    15421 tatgtgccga tgaccgccaa ccgcctcacc ggcatcgtat cgcgcggcgg ttcgattatg
    15481 gcgaaatggt gtttggcaca tcatcgggaa aacttcctct acacgcattt cgacgaaatc
    15541 tgcgaaatca tgaaggcgta tgacgtatcg ttcagcttgg gcgacggcct gcgccccggc
    15601 tgcattgccg atgccaacga cgaatcccaa ttcgccgaat tgcacacctt gggcgaattg
    15661 accgataaag cgtggaaaca cgacgtacaa gtcatgatcg aaggccccgg ccatgtgccg
    15721 ctgcaacgcg tcaaagaaaa tatgaccgaa gagttgcaac actgctttga agcaccgttt
    15781 tacacactcg gcccgctcgt taccgacatc gcccccggct acgaccacat cacttcgggc
    15841 ataggcgcgg ccaatatcgg ctggtacggc acggcgatgc tttgttacgt tacccccaaa
    15901 gaacatttgg ggctgcccga caaagaagac gtgcgcaccg gcatcatcac ctacaaactc
    15961 gccgcccacg ccgccgacct cgccaaaggc tggccgggcg cgcaattacg cgacaacgcc
    16021 ctgagcaagg cgcgtttcga attccgctgg cgcgaccaat tccgcttaag cctcgacccc
    16081 gaacgcgccg agagcttcca cgacgaaacc ctgcccgccg aaggcgcgaa aatcgcccat
    16141 ttttgctcaa tgtgcggccc caaattttgc tcgatgaaaa tcacgcagga agtgcgcgac
    16201 tacgccgaca agcaaaaagc ccaacggcag ggtatggagg aaaaagcggt cgagttcgtc
    16261 aaaaaaggcg cgaagattta cagttgaaac gtcaagcaaa aaatcccgtc tgaagcccgg
    16321 aaaaaaggct tcagacggga ttttttcgct tgtgaaaatg attaaacaac cgatcattaa
    16381 agtaattttt aaaattttta tattcacata gatgggaatg atgggattta gggttctgat
    16441 tttgttttga gagaatgaag gaatttgaga ttgtgggcga ttatcgggaa aaatag
//
LOCUS       DAXGCP010000051        16328 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.051, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000051 DAXGCP010000000
VERSION     DAXGCP010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16328)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16328)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16328
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.051"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..260
                     /locus_tag="ACFJCW_001358"
     CDS             <1..260
                     /locus_tag="ACFJCW_001358"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151484.1"
                     /translation="LLSLICSVLSSYFEGNISANLVQTLVFYSPVSVFCHSRFRFQQT
                     AFKQLKEKGQIAQGSPFNQIRISIPGNFGHLTVSAFLPRRQ"
     gene            complement(342..1127)
                     /locus_tag="ACFJCW_001359"
     CDS             complement(342..1127)
                     /locus_tag="ACFJCW_001359"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC4151485.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGFHGKATAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMSGEDAWLESGDIVAANPKVLAQMLKIISAHV"
     gene            1371..2186
                     /locus_tag="ACFJCW_001360"
     CDS             1371..2186
                     /locus_tag="ACFJCW_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HFC4151486.1"
                     /translation="MTALKPALPDYLGNIRIILTRTSHPANIGSAARAMKTMGLHRLT
                     IVTPNLMATPMTENPPVFNPDDVQSFALPEESFILASGAADVLHNAEIVATLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTDSPMTHLQQEDHAATHEQIKGMLAHME
                     SVMDDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            2227..3096
                     /locus_tag="ACFJCW_001361"
     CDS             2227..3096
                     /locus_tag="ACFJCW_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HFC4151487.1"
                     /translation="MTDIRISMNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELS
                     VRELLGERGFRYLLALDADPAPLTDYLAQRAPFDHRLGIYAEELLAFWFTNAPHTKLH
                     AYNLTVFSDGQTLGAADFVVSLNQQPYHIELACKYYGGDQVQNLRGLNPKDTLTDKAA
                     KLVQQFQLVHTSQGKATLAAQDLPENPLPASIVRGIGFFPQGFHAFEPPLNPYGWRGI
                     YIQDWAEYGFERQEARYHLLDRMVYLAPARVAETETLNATEIRRIDQGLIAVLECRPD
                     GFWHEIERIMKAV"
     gene            3132..4388
                     /locus_tag="ACFJCW_001362"
     CDS             3132..4388
                     /locus_tag="ACFJCW_001362"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HFC4151488.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFRKHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFFG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWSEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESPDAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQGEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAVGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERIGSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVAKLLEQQH
                     SILDAASKLVKPQGCLVYATCSVLPEENELQIKRFLSEHPEFEPVNCAELLQNLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            complement(4446..4586)
                     /locus_tag="ACFJCW_001363"
     CDS             complement(4446..4586)
                     /locus_tag="ACFJCW_001363"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151489.1"
                     /translation="MEYGYATVYFGKEKENCRQARIKSDEARDSAFGVESVESAVFDI
                     FN"
     gene            4734..5162
                     /locus_tag="ACFJCW_001364"
     CDS             4734..5162
                     /locus_tag="ACFJCW_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC4151490.1"
                     /translation="MNFALSVITFTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTLQTKPAVKPKPAVDTNADSAKENEKDIAEKNGQLEEEKKKIAETERQ
                     NKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(5211..6554)
                     /locus_tag="ACFJCW_001365"
     CDS             complement(5211..6554)
                     /locus_tag="ACFJCW_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HFC4151491.1"
                     /translation="MFHSVNVFTGETLYRRPDQDYAEFERRLADLKMHGRAFAQLGVT
                     ERAARLQKFAGRLEAEKERFAEMVCEEVGRCLHECRAEIVKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSRALFDLASDGIPLAGAWLDEADTLKAVEDTDAMAFTGSTHTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFIQLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKVPQGSGWFY
                     PATVLDRVNPACRVWREEVFGPVALILRAENEEHAICLANDSPFGLGACIYTADTERA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(6559..7212)
                     /locus_tag="ACFJCW_001366"
     CDS             complement(6559..7212)
                     /locus_tag="ACFJCW_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HFC4151492.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGALLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQARPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIAAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            7362..7652
                     /gene="gatC"
                     /locus_tag="ACFJCW_001367"
     CDS             7362..7652
                     /gene="gatC"
                     /locus_tag="ACFJCW_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HFC4151493.1"
                     /translation="MALTLADVDKIARLSRLQLTAEEKEKSLQELNDIFTMVEQMQNI
                     NTDGIEPMAHPHEVALRLREDEVTETDRAAEYQAVAPEVRNRLYIVPQVIEE"
     gene            7715..9160
                     /gene="gatA"
                     /locus_tag="ACFJCW_001368"
     CDS             7715..9160
                     /gene="gatA"
                     /locus_tag="ACFJCW_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HFC4151494.1"
                     /translation="MTQYTLKQAGSLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNPEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSFEREKEDYTRDLDKPLKGVKIGLPKEYFSEGNSTDVQTA
                     LQNTIDLLKAQGAEPVEVSLPQTKLSIPAYYVLASAEAGTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPSAAPKIGADTSPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            9157..10089
                     /locus_tag="ACFJCW_001369"
     CDS             9157..10089
                     /locus_tag="ACFJCW_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HFC4151495.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQDAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDVLC
                     QMEDCRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPSGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAALKLDGAIGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLADIESKKRSMYRKRYE
                     MLDDMVAKMKDSLKTEARGISDGIQTEKPLRRTV"
     gene            10132..11562
                     /gene="gatB"
                     /locus_tag="ACFJCW_001370"
     CDS             10132..11562
                     /gene="gatB"
                     /locus_tag="ACFJCW_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HFC4151496.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHASVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGGDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLDICDGNMAEGSFRIDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLDQAINYEAEAQIEILEDGGTVQQATMLFDPEKGETRVMRLKEDAHDYGYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRVQAAYFEEAAK
                     ESGQGKPTANWMNGELAATLNKEGMELADSPITAPRLAALVGKIADGTLSGKLAKKAF
                     EAMWAEPETSIAEIIEKHSLQQMTDTGAVEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKTSKGKANPAQVQELIKAKLA"
     gene            11654..12664
                     /locus_tag="ACFJCW_001371"
     CDS             11654..12664
                     /locus_tag="ACFJCW_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HFC4151497.1"
                     /translation="MNHTVTLPDQTTFAAGDGETVLSAAARQNLNLPHSCKNGVCGQC
                     KAELASGDIQMGGHSEQALSEAEKAQGKILMCRTTAQSDININIPGCKADALPVRTLP
                     ARIESMVFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANSPDQEGILE
                     LHIRRRENGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILPATDTGYAP
                     IRSILLDLIRQNSSRAAHFYWGARHQDDLYALEEAQGLACRLKNTCFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(12794..13426)
                     /gene="pdxH"
                     /locus_tag="ACFJCW_001372"
     CDS             complement(12794..13426)
                     /gene="pdxH"
                     /locus_tag="ACFJCW_001372"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HFC4151498.1"
                     /translation="MDLHNIREDYSKRELSEADCADNPIEQFERWLDEAVRAEVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLELNPFAAMTFFWPELE
                     RQVRVEGRVGRLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            13486..13638
                     /locus_tag="ACFJCW_001373"
     CDS             13486..13638
                     /locus_tag="ACFJCW_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020424398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151499.1"
                     /translation="MHKLCPQSRSDDFIRKTAASGTISNRPTEDGILSTRPAAHAAEE
                     PPYQAS"
     gene            13647..14696
                     /locus_tag="ACFJCW_001374"
     CDS             13647..14696
                     /locus_tag="ACFJCW_001374"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HFC4151500.1"
                     /translation="MSKQPTSKRQWRDGAAPSAKKTAKPFKSKARPKDETRKTAAQAY
                     GQKASDGIKLQNAPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTTEQMRSLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NIVIKEGRNREVRRIFESQGLTVSRLVRVAFGPIGLPNRLKRGQFYELNPAEVANILK
                     WADMLLPGERRRKKA"
     gene            complement(14755..16296)
                     /locus_tag="ACFJCW_001375"
     CDS             complement(14755..16296)
                     /locus_tag="ACFJCW_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HFC4151501.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVRTHNLFLLYLGNGVIGGVGLGLGYVGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVAETFAVLGLFYLALMMFGAFTIRVPADGWK
                     PEGYTVPKTQNKPVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSAGRQSAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAARSGNPDDETAISDAYLVGEKVSGDGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
BASE COUNT         4151 a         4964 c         4030 g         3183 t
ORIGIN      
        1 tacttctttc tttaatttgc agtgtgttat cttcatattt cgagggtaac atatctgcta
       61 atctggtaca gacccttgtt ttttattccc cggtgtctgt tttctgccac agccgattta
      121 gattccagca aaccgccttt aaacaattga aagaaaaggg acaaattgca cagggttctc
      181 cgtttaacca gatacggatt tccattcccg gcaatttcgg gcatttgacc gtttccgcct
      241 tcctgccccg ccgccaataa aaatgccgtc tgaaatatcg gcacgatact tcagacggca
      301 tacccgcccg ttttcccgca tttccgggag ctggctgaaa tttaaacgtg tgcggaaatg
      361 atttttaaca tttgcgccag tactttggga ttcgcagcca caatatcgcc gctttccaac
      421 caagcgtcct cacccgacat atcggtaacg atgccgcctg cttcttggac aatcaatgca
      481 ccggcggcaa tgtcccacgg tttgaggttg aactcgaaaa agccgtcaaa acgtcctgtt
      541 gctacggcgc acaaatccaa agaagccgcg ccttcgcggc ggcctccggc ggtttttgcc
      601 aaaaagtctt tcaaaatcgc cagatatttg tccatcatgc tttgatcgac aacagggaag
      661 ccggtaccga tcaggcagcg gttcaattcg atgcggttgg agacacggat gcggcggtcg
      721 ttaagcaacg cgcctttacc gcgcgaagcc atgtacacgt cgttacgttc gggggcgtac
      781 accaaagctt cctgcaacac gcctttgtgc agcagtgcca tagagatggc gtattgggga
      841 tggccgtgaa ggaaattggt cgtcccgtcg agcggatcga taatccattc gtactcggct
      901 gtagctttgc cgtggaagcc gctttcttcg caagtgattt tgtgatgcgg ataagcttct
      961 ttcaaagcct caaccaggat gatttcggaa ttgcggtcaa catcggaaac aaaatcgttg
     1021 aaggctttgc tgtcggtttt gacggcatcg aggttacctg cggcgcgaat catcatctga
     1081 ccggcacggc gggcggcttt aaaggctgta ttcaaaaacg gattcatcag atttccttaa
     1141 gggtggcata ccgccggttc ggacgtgcag tccttcggag cggcaaaatc ggagtttatc
     1201 tggttggggc aaaccctgcc aaatcgggta aaataccgcc tgacgcgtgt ctgcttcagg
     1261 cgcaacgtta aatttccgac gttgttaaag aacagttcag acggcatttt accgtccgaa
     1321 cgaaaaagac ggcgcattat accctattcc attccgaccg aaaaccgaac atgactgctc
     1381 tcaaacccgc cctgcccgac tacctcggca acatccgcat catcctcaca cgcaccagcc
     1441 accccgccaa catcggctct gccgcacgcg cgatgaaaac gatgggtctg cacaggctga
     1501 ccatcgtcac ccccaatctg atggcaacgc cgatgacgga aaatccgccc gtttttaatc
     1561 ccgatgacgt gcaaagtttt gcactgcctg aagaaagttt catcctcgct tccggcgcgg
     1621 cggacgtatt gcacaacgcc gaaatcgtcg ccacactgga cgaagccctt gccgacacca
     1681 ccatcgcctg cgccctgacc agccgccgcc gcgaaatcac cgcgccgctg caaaccccgc
     1741 gcgatttggt gcccgaatta ctgcaggccg ccaaccgcgg cgagaaagtg gcgctggtct
     1801 tcggcaacga gactttcggc ttgagcatcg aagaagtccg agcgtgcaac cgactgatga
     1861 ccatcaacgg caaccccgac tatttctcgc tcaacctcgc ccaagccgtg caggtcgtgt
     1921 gctacgaaat tttcagccaa accgattcgc ccatgaccca tcttcaacag gaagaccacg
     1981 ccgcaaccca cgagcaaatc aaaggcatgc tcgcccacat ggaaagcgtg atggacgaca
     2041 tcggcttttt caaccgccgc aacggcgagc gtctgatgcg ccgtatgcag agcctgttcg
     2101 gacgcgccaa cacgcaaacc gaagacatcg acatcctgcg cggttttttc aataccgtca
     2161 gccaccgtat ccataaaaaa gactgattaa ggccgtctga aaacattaca agctttttca
     2221 gacggcatga ctgatattcg gataagcatg aattacgccc tagacgcatt atggtggaaa
     2281 ctcaccagcc aacccgtccg cgacctcgcc tcgctgctga ctgcgccgcc tttgtggcaa
     2341 agcggttgcg aattgagcgt gcgcgaacta ctgggggaac gcggtttccg ctacctttta
     2401 gcattggatg ccgatcccgc gccgctgacg gattaccttg cacaacgcgc cccgttcgac
     2461 caccgtctcg gcatttatgc cgaagagctg ctggcttttt ggtttaccaa cgcaccgcac
     2521 accaaactgc acgcatataa tctgaccgtt ttttcagacg gccaaacttt aggcgccgcg
     2581 gattttgtcg tttccctcaa ccaacagccc tatcatatcg agctggcgtg taaatactac
     2641 ggcggagacc aagtgcagaa cctgcgcggt ctcaatccca aagacacgct gacggacaaa
     2701 gccgccaaat tggtgcagca attccagctg gtgcatacgt cgcaaggcaa agcaacctta
     2761 gccgcacaag acctgccgga aaatccactt cctgcttcca tcgtgcgcgg catcggattt
     2821 tttccacaag gtttccatgc ttttgagccg ccgcttaatc catacggctg gcgcggcatc
     2881 tatattcaag attgggcgga atacgggttt gaacgccaag aagcgcgcta tcacctgctc
     2941 gaccgcatgg tctatctcgc gcctgcgcgt gtcgccgaaa ccgaaacatt aaacgcaacc
     3001 gaaatccgcc gcatcgacca aggcttgatt gccgttttgg aatgtcggcc ggacggcttt
     3061 tggcacgaaa tcgaacgtat tatgaaggcc gtctgaaacc ctttaccaac tttaagagaa
     3121 cccattacat tatgaacgcc gcacaactcg accataccgc caaagttttg gctgaaatgc
     3181 tgactttcaa acagcctgcc gatgccgtcc tctccgccta tttccgcaaa cacaaaaagc
     3241 tcggccgcca agaccgccac gaaatcgccg aaaccgcctt tgccgcgttg cgacactatc
     3301 aaaaaatcag taccgccctg cgccgtccgc acgcgcagcc gcgcaaagcc gcactcgccg
     3361 cgctggttct cggcagaagt accaacatca gccaaatcaa agacctgctt gatgaagaag
     3421 aaacagagtt tttcggcaat ttgaaagccc gtaaaaccga gttttcagac ggcctgaata
     3481 ccgccgcaga attgccgcaa tggctggtgg aacaactgca acagcattgg agcgaagaag
     3541 aaatcctcgc tttcggccgc agcatcaacc aagctgcgcc gctcgacatc cgcgtcaata
     3601 ccttgaaagg caaacgcgac aaagtattgc cattgttgca agccgaaagc cccgatgcag
     3661 aggcaacgcc ttattctcct tggggcatcc gcctgaaaaa caaaatcgcg cttaacaaac
     3721 acgaactgtt tttggacggc acgctggaag tccaaggcga aggcagccag ctgcttgcct
     3781 tattggtggg cgcaaaacgc ggcgaaatca ttgtggattt ctgtgccgga gccggcggta
     3841 aaaccttggc tgtcggcgcc caaatggcca acaaaggcag aatctacgcc ttcgacatcg
     3901 ccgaaaaacg ccttgccaac ctcaaaccgc gcatgacccg tgccggactg accaacatcc
     3961 accccgaacg tatcggcagc gaacacgata cccgtatcgc acgactggca ggcaaagccg
     4021 accgcgtgtt ggtcgatgcg ccctgctccg gcttaggcac actgcgccgc aatcccgacc
     4081 tcaaataccg ccaatccgcc gagaccgtcg ccaaactttt ggaacagcaa cacagtatcc
     4141 tcgatgccgc ctccaaactg gtgaaaccgc aaggctgttt ggtttacgcc acctgcagcg
     4201 tgttgccgga agaaaacgaa ctgcaaatca aacgtttcct gtccgaacat cccgaatttg
     4261 aacccgtcaa ctgcgccgaa ctgctgcaaa acctgaaggt cgatttggat accggcaaat
     4321 acctgcgcct cgattccgcc cgacaccaaa ccgacggctt cttcgccgcc gtattgcaac
     4381 gcaaataaac cggtttgaac aaaatgccgt cagaaccctt ttcaaagcgt tcggacggca
     4441 tttcatcaat taaaaatatc aaaaaccgca gattcaaccg attcaacacc aaaggcagaa
     4501 tcacgcgcct catcggattt tatacgcgcc tgcctgcaat tttctttttc tttgccaaaa
     4561 tatacggtag cataaccata ttccaatgat atttttggga atctgtttta ccccaatata
     4621 taaagcacca tattaaggcg gagtgtcttc cctgccttga cccgaacccg gaaaagacac
     4681 cgcccgaacc aatcccgatt ctgcccgggc agtcagccat caaggaaacc ctaatgaact
     4741 ttgctttatc cgtcatcaca tttaccctcg cctctttcct gcccgtcccg cctgccggag
     4801 ccgccgtctt tacttggaaa gacggcggcg gcaacagcta ttcggatgtg ccgaaacagc
     4861 ttcatcccga ccagagccaa atcctcaacc tgcggacgct ccaaaccaaa ccggcggtca
     4921 agcccaaacc tgccgtcgat acgaatgcgg acagtgcgaa ggaaaacgaa aaggatatcg
     4981 ccgagaaaaa cgggcagctt gaggaagaaa agaaaaaaat tgccgaaacc gaacggcaga
     5041 acaaagaaga aaactgccgg atttcaaaaa tgaacctgaa ggcggtggga aactcaaatg
     5101 cgaaaaacaa ggatgatttg atccgtaaat acaataacgc cgtaaacaaa tactgccgtt
     5161 aatcggctct agcgcaaacc cgatgccgcc tgaagcggca cggggtttgt ttatttctgc
     5221 cagtaggttt tgacgttgac gaactcgtac aacccgaatt cggacagttc gcgcccgtaa
     5281 ccggaatctt tgactccgcc gaaaggcagg cgcaaatcgc tgctggtatg gcggttgata
     5341 aacaccgatc cggcctgtat tttttcggca aaccgccagg cgcgttcagt atcggcggta
     5401 taaatgcagg caccgagccc gaacggggaa tcattggcaa ggcagatggc gtgttcttcg
     5461 ttttcggcgc gcaaaatcag ggcgacgggg ccgaatactt cttctctcca gacgcggcag
     5521 gcaggattta ccctgtctaa aaccgtcgca gggtaaaacc accccgaccc ctgtggaact
     5581 ttgcctccgg tcaggcacac cgcgccgttt gaaacggcat cttcaacctg cccgtgaacc
     5641 cggtcccgca aatcttcgcg gtgcagcggt gcaagcgtgg tatcgggatg tttcgggtcg
     5701 cccattttca atttggcgca ttcggcgaga aacagctgaa taaagcggtc ggctgcggct
     5761 tcggttacga tgatgcgctt ggcggcgtta cacgattgcc ccgcatcgcg gaaacgggaa
     5821 taacaggctt ctgcggcggc gcgttccaaa tcggcatcgg gcatcacgat aaaggcgttg
     5881 ctgccgccga gctccaacac ggttttcttg aggtttgcgc ccgcatgtgc cgcaagaatg
     5941 cgccccgtat gcgtcgaacc ggtaaacgcc atcgcatcgg tatcttcgac tgccttgagc
     6001 gtgtccgcct catccagcca cgcgcctgcc agaggaatac cgtctgaagc caaatcgaac
     6061 aacgcccgac tgacgcgtgc cacgctgggc gcgggtttga cggcgcacgc gttgcccgcg
     6121 cacatagcgg gaacggcgaa acgcaatacc tgccagacgg gatagttcca aggcatgacg
     6181 gcaaacacca cgcccaaagg ctcgaagcgc acctgactca aactcgcctg cgtcgcaatg
     6241 gttttgtggg cgagcagttc gggggcgagg cgggcgtaat agcgtatcag ttcgatagac
     6301 ttgacgattt cggcacggca ttcgtgcagg cagcgtccga cttcttcgca caccatttcc
     6361 gcaaaacgct ctttttccgc ctccaaacgg ccggcaaatt tttgcagacg cgcggcacgt
     6421 tcggttacgc ccaattgcgc gaacgccctg ccgtgcattt tcaaatccgc cagccgccgt
     6481 tcaaactccg cataatcttg atcggggcgg cggtaaagcg tttcgcccgt aaatacattg
     6541 acactgtgaa acatcgaatc aacctgccag ttgcgggaat atcgttttca gtcccgacac
     6601 aataatctcc accgataccg ccgccagcat catacccata atgcggttta aaatcgtcag
     6661 ccccgtcgcg cccagcaggc ggctgacctt cccggcaacg attaaaatgg cataacaaat
     6721 cgcactgacc accaaaccgg ccgcgataat cagcgcgata tcgctgtacg ttttggctgc
     6781 cgaagcgtaa ataatcacgg tcgaaatacc gcccggaccg atggtgatcg gtatggcgat
     6841 gggcacgacg gcaatcgccc ctgcattgcg ggcggggcgc gcttgccccg tttccggctg
     6901 cgcgccgaga ttctgcttgg cgggattgtc gttgccgttc atcatcgaaa tggcgatcag
     6961 cagcaccaaa atcccgccgc cgacctgaaa cgaaccgacg ctgatgccca aaaccttcaa
     7021 tagcgcaccg ccgatcagcg caaataccgc aatcacggca aacacggcga cggcggccgt
     7081 ccgcgcgacc ttcctgcgct ccttcgtgct gtgtccgttg gtcaggtcaa ggtaaagcga
     7141 caacgcgcta aacggattga tcagcaccaa aaaagccaca atcagcttgc cgatttccat
     7201 acccaatccc attatttccc ctctttcaaa cccgtgcggc aggcatccga tgctgcaaat
     7261 tgccgccgca acggattttt ccgttataat taaaaatcca agcaatacgc cccatcatac
     7321 ccgaacgacg gtatctttac catcagacaa ggatgctttt catggcactg acacttgccg
     7381 acgtagacaa aatcgcccga ctctcccgac tgcagctgac tgcggaagaa aaagaaaaat
     7441 cgcttcaaga attaaacgac attttcacta tggtcgaaca gatgcagaac atcaacacag
     7501 acggcatcga gccgatggcg cacccgcacg aggtcgccct ccgcctgcgt gaagacgaag
     7561 taaccgaaac cgaccgcgcc gccgaatacc aagccgttgc gccggaagta cgcaaccgcc
     7621 tgtacatcgt accgcaagtt atcgaagaat aatccgaata cgcttcagac ggcatcagca
     7681 ataccgcccg aagcccttta aggatggaag atttatgacc caatacacat tgaaacaggc
     7741 aggcagcctg ttgcagtcca aacagatttc cgccgtcgaa ctggcaagcg cataccttgc
     7801 cgccatcgct gaaaaaaatc ccgccctcaa cggctatatc accatcgacc aagataaaac
     7861 ccttgcagaa gcccgtgccg ccgacgaacg catcgcgcag ggcaacgctt cggcacttac
     7921 cggcgttccc gtcgcctaca aagacatttt ctgccaaacc ggctggcgca gcgcgtgcgc
     7981 ttccaaaatg ctcgacaact tcatctcccc ctacacggcc accgtcgtcc aaaacctgct
     8041 cgacgaaggt atggtaacgc tcggccgcac caatatggac gagttcgcta tgggttcgac
     8101 caatgaaaac tcattctacg gcgcggccaa aaacccgtgg aatccggaac acgtacccgg
     8161 cggttcgtca ggcggttccg ccgccgtcgt tgccgcgcgc ctcgcccctg ccgcgctcgg
     8221 ttcggacacg ggcggctcta tccgccaacc cgcatcgcac tgcggcatta ccggcatcaa
     8281 acctacctac ggcacggttt cccgcttcgg tatggtcgcc tacgcctcca gcttcgatca
     8341 agccggcccg atggcgcaaa ccgccgaaga ctgcgcgatt ctgttgaatg caatggcagg
     8401 tttcgacccc aaagactcca ccagcttcga acgcgaaaaa gaagactaca cccgcgattt
     8461 ggacaaaccg ctcaaaggcg tgaaaatcgg cctgcccaaa gaatacttca gcgaaggcaa
     8521 cagcaccgat gttcagacgg cattgcaaaa caccattgat ttgctgaaag cacaaggcgc
     8581 ggaaccggtc gaagtttccc tgccgcaaac caagctgtcc atccccgcct actacgtcct
     8641 cgcctccgca gaagccggca ccaacctttc acgttacgac ggcgtacgtt acggacaccg
     8701 tgccgcccaa ttcggcgatt tggaagaaat gtacggcaaa acccgcgccg aaggttttgg
     8761 cagcgaagtc aaacgccgca tcatgatcgg cacttacgta ctgtcgcacg gctactacga
     8821 tgcctattat ctcaaagccc aaaaactgcg ccgcctcgtt gccgatgact ttcagacggc
     8881 atttgcacgg tgcgacctca tcctcgcgcc gaccgcaccc tccgccgcac ccaaaatcgg
     8941 agcggatact tctccggttg aaacctactt gagcgacatt tacaccatcg ccgtcaacct
     9001 cgccggactg cccgcattga ccctgcccgc aggcttcagc ggcggcggac tgcccgtcgg
     9061 tgtacagctt gtcggcaact acttcgccga agccaaaatc ctcggtgcgg cgcatcaaat
     9121 ccaactcaac agcgattggc acggcaaacg acccgaatga agcagaaccg cacctttacc
     9181 ttccccgatt ttcgcaccgt ttacagctat gcgcctttat atcggctgca acatttaaaa
     9241 tacacattgc gaaaattttt cggaaaaaaa gaaatttacg ccttcgagca gtttgtcaac
     9301 gcctccccta tccgtcaggg gctgttcctc cactgcccgc aggatgccta tccgctgctg
     9361 cgcgaatttg ttgacaggcg ttttaactgc aaacgccgtt tagatgcgat gacggcagat
     9421 tttctcatgg cggaaaaact cttcggcaca gacgttctgt gccaaatgga agactgccgc
     9481 ttccatctgg tcttggcgca cctttcagac ggcatcagct tgtggctcaa ccgcaacgac
     9541 aactgcgtcg aagaaggcgc gtggtcttta tctttgcgcg atgaagcagg caaccggctg
     9601 tatatggcga ccttcgcctt tgtcggcaca cacctgctga cagcctccgt acaagggccg
     9661 tcaggtgaag aagccaaaga caccgtccgc cgcataacca aacaacttca cggcttacgt
     9721 ccccaacaac tgatggtaac cgcactgcaa tatttcgccg ccgcattaaa attagacggc
     9781 gcgataggca ttgcacaaaa acatcaagtc aaattacgct ggaaacttaa aaagcgcgtc
     9841 aaaatgaatt acgacgcatt ctggcaggaa tacggcgcaa gtttggaacg ggacggctac
     9901 tggcatcttc cccaaacccc cgcccgcaaa gaccttgccg acatcgaaag caaaaagcgt
     9961 tcgatgtacc gcaagcgtta tgaaatgctg gacgatatgg ttgcaaagat gaaggacagt
    10021 ctgaaaacag aagcacgcgg catttcagac ggcatccaaa cggaaaaacc gctccgccgg
    10081 acagtctgat gcgaagacta tcgaattgat attttagaga aagaacctcc tatgacttgg
    10141 gaaactgtaa tcggcttgga aatccacgtc caattgaaca ccaaatccaa aatcttcagc
    10201 ggtgcatcga ccgcattcgg cgcagaaccc aacgcgcacg ccagcgtagt ggaatgcgcg
    10261 ctgccgggcg tactgccggt aatgaaccgc gaagtcgttg aaaaagccat caaattaggt
    10321 ttggctttgg atgcaaaaat caaccggaaa aacgtgttcg accgcaaaaa ctacttctat
    10381 cccgacttgc cgaaaggcta tcaaatcagc cagttggatt tgccgattgt cgaacacggc
    10441 aaattggaaa tcgtggtcgg cggcgatgtg aaaaccatca acgtaacccg cgcccatatg
    10501 gaagaagacg caggcaaatc cgtgcacgag ggcttgaacg gcgcgaccgg catcgacctg
    10561 aaccgcgccg gcacgccgct gttggaagtg gtatccgaac ccgaaatgcg ctccgccgcc
    10621 gaagccgttg cctacgccaa agccttacac agcttggtaa cctggctgga catttgcgac
    10681 ggcaatatgg cggaaggttc gttccgcatc gatgccaacg tatccgttcg cccgaaaggc
    10741 caagcggaat tcggcacgcg ccgcgaaatt aaaaacctca attccttccg tttcttggat
    10801 caggcgatta attacgaagc cgaagcgcaa atcgagattt tggaagacgg cggcacagtt
    10861 caacaggcga cgatgctgtt cgacccggaa aaaggcgaaa cccgcgtgat gcgcctgaaa
    10921 gaagacgcgc acgactacgg ctacttcccc gatcccgatt tgctgcccgt catcatttca
    10981 gatgcccaaa tgcaaaaagc caaagcagaa atgcccgagc tgccgaaaga aatggcggcg
    11041 cgtttcgtgg cggattacgg cgtgtccgaa tacgacgcgc gcctgctcac cgccagccgc
    11101 gtgcaggctg cctattttga agaagccgcc aaagagagcg gacaaggcaa gccgactgcc
    11161 aactggatga acggcgaact tgccgctacg ctgaacaaag aaggcatgga acttgccgac
    11221 agcccgatta ccgccccacg ccttgccgcg ctggtgggca aaattgccga tggcacatta
    11281 agcggcaaac tggcgaaaaa agcctttgaa gccatgtggg cggaaccgga aaccagcatt
    11341 gccgaaatca tcgaaaaaca cagtttgcaa cagatgaccg ataccggcgc ggttgaagcg
    11401 atggtggacg aagtgctggc aaacaacgcc aaagccgtgg aacagtttaa atccggcaac
    11461 gaaaaagccc tgaatgcgat tgtggggcaa gtgatgaaga ccagcaaagg caaagccaat
    11521 cccgcgcagg tgcaggagtt gattaaagcc aaacttgcct gataagcaag atgccgtctg
    11581 aaacccaaat ccgacgttca gacggcattt tcacagtctg accacattaa aacagcataa
    11641 aaaacaatat tccatgaacc acaccgttac cctgcccgac caaaccacct ttgccgccgg
    11701 cgacggcgaa accgttttgt ccgctgccgc ccgtcaaaac ctcaatctgc cccattcctg
    11761 caaaaacggt gtctgcggac aatgcaaagc cgaactggcc agcggcgata ttcaaatggg
    11821 cggacactcg gaacaggctt tatccgaagc agaaaaagcg caaggcaaga ttttgatgtg
    11881 ccgcaccacc gcgcaaagcg atatcaacat caacatcccc ggctgcaaag ccgatgccct
    11941 acccgtccgc accctgcccg cacgcatcga aagtatggtt ttcaaacacg atgtcgccct
    12001 cctgaaactt gccctgccca aagccccgcc gtttgccttc tacgccgggc aatacattga
    12061 tttactgctg ccgggcaacg tcagccgcag ctactccatc gccaattcgc ccgaccaaga
    12121 aggcattttg gaactacaca tccgcaggcg cgaaaacggt gtctgctcgg aaatgatttt
    12181 cggcagcgaa cccaaagtca aagaaaaagg catcgtccgc gttaaaggcc cgctcggttc
    12241 gtttaccttg caggaagaca gcggcaaacc cgtcatcctg ccggcaaccg acacaggcta
    12301 cgcccccatc cgcagcatcc tgctcgacct tatccgccaa aacagcagcc gcgctgccca
    12361 tttctactgg ggcgcgcgtc atcaagatga tttgtatgcc ctcgaagaag cacaagggtt
    12421 ggcatgccgt ctgaaaaaca cctgcttcac ccccgtattg tcccgtcccg gagagggctg
    12481 gcagggaaga aaaggccacg tacaagacat cgcggcacaa gaccaccccg acctgtcgga
    12541 atacgaagtg tttgcctgcg gctctccggc tatgaccgaa caagcaaaaa atctgtttgt
    12601 gcaacagcat aagctgccgg aaaacttgtt tttctccgac gcattcacgc cgtccgcatc
    12661 ataattcctc ggtataaaga ggattcgggc tttccgttcg gaacacaaaa aacttcccgt
    12721 ccgtattttc cccgtgaaaa aatgccgtct gaaacctgat tccggttttc agacggcata
    12781 tgttttttcc tgttcaaggc gacaaccgct cgcgtatcca gccgccatcc agcaaacggt
    12841 attggatgcg gtcgtgcagc ctgctcggcc tgccctgcca aaactcaatc aaatcgggaa
    12901 tcacaatata gccgccccaa tgcggcggac gcggcacgtg caaaggatgt ttgagtccga
    12961 ccgccgccgc ctttgccacc aataccgcct tgttcggaat cacctcgctc tgcgcgcttg
    13021 cccacgcacc caaacggctc tgatacgggc gactctcaaa atattcgtcc gacaacttct
    13081 ccgccagcct tccgacacgc ccttccacgc gcacctgacg ctccagctcc ggccaaaaaa
    13141 acgtcatcgc cgcaaacgga ttgagttcca gcgaacgccc cttgcggctg tggtaattcg
    13201 taaagaaaac aaaaccttct gaattaacct ccttcaaaag caccatacgg ctgttgggcc
    13261 tcccgcgccc gtcgaccgcc gccacattga ccgccgtcgg ctcgttgacc tcggcgcgta
    13321 ccgcctcgtc caaccaccgc tcgaactgct cgatcggatt atcggcgcaa tcggcttccg
    13381 acaattcccg tttgctgtaa tcttcccgaa tattgtgcaa atccatttac cgctcctctt
    13441 atcatttgaa agattctact cccgcacgca aaccgatttc aaccgttgca caaactttgt
    13501 ccccaaagcc gcagcgacga tttcatccgc aaaaccgccg catcaggtac aatatcgaac
    13561 cgtccgaccg aggacggcat tttatcaacc cgtcctgccg cacacgccgc agaagaaccg
    13621 ccttatcagg cgagttagga aaaatgatgt ccaagcaacc caccagcaaa cgccaatggc
    13681 gcgacggcgc agccccgtct gccaagaaaa ccgccaaacc tttcaaaagc aaagcccgtc
    13741 ccaaagacga aacgcgcaaa accgccgccc aagcttacgg acaaaaagct tcagacggca
    13801 tcaagctgca aaacgccccc aaacagcgcg ccgccaaagc caaaaaactc gtcgtccgca
    13861 atcccaacca aaaaattatg gaacacgcgc gcgatttgaa agaacgccgc agcgacctgt
    13921 cgcgtatgga acccgaacgc ctgcaaaaag tgcttgcagc ctccggcgtc ggctcgcgcc
    13981 gcgaaatgga agaatggatc aacaacggct gggtaacggt caacggcaaa accgcgcaac
    14041 tgggcgacaa agttaccccc gacgaccacg ttaccgtcaa aggcagcatc atcaaactca
    14101 aatgggccga ccgcctgccg cgcatcatcc tgtattacaa acaagaaggc gaaatcgttt
    14161 cccgcgacga cccgcaaggc cgcgtcagca tattcgaccg cctgccgcag gccgccagca
    14221 gccgctgggt cgccatcgga cgcttggaca tcaacaccag cggacttctg attctcacta
    14281 cctccggcga actcgtccaa cgtttcgccc accccagctt cgaagtcgaa cgcgaatacg
    14341 ccgtgcgcgt actgggcggg ctgactaccg aacaaatgcg cagtctcacc gaagaaggcg
    14401 tgatgctcga agacggcttg gcaaaagtcg aacgcatccg cgaacaaggc ggcgaaggcg
    14461 caaacaaatg gtacaacatc gtgattaaag aaggccgcaa ccgcgaagtg cgccgcatat
    14521 tcgaaagcca aggcctcaca gtcagccgcc tcgtgcgcgt cgccttcggc cccatcggac
    14581 tgcccaaccg cctcaaacgc ggacaattct acgaactcaa ccccgccgaa gtcgccaaca
    14641 tcctcaaatg ggcggatatg ctgctgccgg gcgaacgccg ccgcaaaaaa gcctgaaagt
    14701 aaaaatgccg tctgaaacac ctgctgtttc agacggcatt ttattcgggc gttttcagga
    14761 gaaaaggtcg agtgctttga caaagaccat caccacgccg taggcgagcg gtatgacggc
    14821 caatgcccaa cgccaccaga ccgatatgcc gtcgccggaa actttttcgc ccacaaggta
    14881 agcgtcggat atggcggttt cgtcgtcggg gttgccgctg cgtgcggcgg ttttgatgtc
    14941 tttttcgtgg tgtttttcgt gtacggattt gacggcgagg ttgcacaaca aaccgataat
    15001 cagcaggccc gccataatgt acatggttac gctgtatgcc tgtgccgccg gtatgccgct
    15061 gtcgatttgg ctttggcgta tgtaattgac cagtaccggg ccgatgacgg cggcggttga
    15121 ccaggccagc aggatgcgcc cgtgaatcgc gccgacctga taggtgccga acaggtcttt
    15181 caggtaggcg ggaatggcgg caaatccgcc gccgtacatg gaaataatca cgcaaaagcc
    15241 gatgatgaac agggctttgc tgccgccttc gccgatggag ggaacggcga aatacagcag
    15301 cgaaccgagt acgaagaaga tggtgtaggt gtttttgcgt ccgattttgt cggaaacgct
    15361 cgaccacaaa aagcgtccgc ccatattaaa caggctcagg aggctgacga agcctgccgc
    15421 cgcacctgcg ccgactgccg actgcctgcc tgcggaggtt tcggaaaaga gttcctgaat
    15481 catcacggat gcctggccca atacgccgat gccggcggtt acgttcaggc acaataccca
    15541 gaacaacagc caaaactgcg gcgttttcat ggcttgggac acgttgacat gattgctgct
    15601 gaccggcttg ttttgcgttt tcggcacggt atagccttca ggtttccagc cgtcggcagg
    15661 tacgcggatg gtaaacgcgc cgaacatcat cagtgcgagg taaaacaggc ccaatacggc
    15721 aaaggtttcg gcaaccccga ccgaagcggc gtttgaaaag gcgttcatca gtgatacgga
    15781 aagcggcgag gccagcattg cgccgccgcc gaaacccata atcgccaaac cggtcgccat
    15841 acccggcttg tcgggaaacc atttcatcag cgtggaaacc ggcccgacgt agcccaaacc
    15901 caagcctacg ccgccgatga cgccgttgcc caaataaagc aggaagaggt tgtgcgtacg
    15961 cacgccgaat gcagatacga agaagcccag gctgaaacag caggcggcgg caaatatggc
    16021 tttgcgcggc cctacccgtt ccatccatgt gccgaacagg gcggccgacg cgcccagcat
    16081 cgcgagtgcg atactgaaaa tccaacctac ggtcgtcagc ttccaatctc cggccgccga
    16141 ttcggttatg ccgataagtt tggtcagcgg cgcgttgaat acggaatagg cgtaaatctg
    16201 cccgatggca aggtgcaccg ctaatgctgc gggcggcacg agccaacggt tgaaacccgg
    16261 cttggcaatg cttgcctcac ggtctaaaaa cttcataaca tcctctttct gtcagttgaa
    16321 aaataaaa
//
LOCUS       DAXGCP010000052        16066 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.052, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000052 DAXGCP010000000
VERSION     DAXGCP010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16066)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16066)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16066
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.052"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            44..1447
                     /locus_tag="ACFJCW_001376"
     CDS             44..1447
                     /locus_tag="ACFJCW_001376"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC4151502.1"
                     /translation="MKKIQADIVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMRRVKSERDRFVGFVV
                     TDVEEWPADKRIMGSAKFIDEHTVQIDDHIQIAAKSFVIATGSRPVILPQWQSLGDRL
                     IINDDVFSWDTLPKRVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVHWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGSGLRRSTIGVVFTSPQIGFVGLKYAQVAAQYQADEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            1464..1673
                     /locus_tag="ACFJCW_001377"
     CDS             1464..1673
                     /locus_tag="ACFJCW_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151503.1"
                     /translation="MPPEIFFRRHFIFGDGVGGRMLIPCREGSGKTKNLSFNLLFPRV
                     FVKIYQFVFKIHCSKWDKTGKLTLM"
     gene            1734..2111
                     /gene="sdhC"
                     /locus_tag="ACFJCW_001378"
     CDS             1734..2111
                     /gene="sdhC"
                     /locus_tag="ACFJCW_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HFC4151504.1"
                     /translation="MSVKLRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGILWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            2105..2446
                     /gene="sdhD"
                     /locus_tag="ACFJCW_001379"
     CDS             2105..2446
                     /gene="sdhD"
                     /locus_tag="ACFJCW_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HFC4151505.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFALPKEY
                     PAWQAFFSQAWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            2449..4212
                     /gene="sdhA"
                     /locus_tag="ACFJCW_001380"
     CDS             2449..4212
                     /gene="sdhA"
                     /locus_tag="ACFJCW_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HFC4151506.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGDEYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDSQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVQEIMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            4332..5039
                     /locus_tag="ACFJCW_001381"
     CDS             4332..5039
                     /locus_tag="ACFJCW_001381"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HFC4151507.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRSLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDNLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRVV"
     gene            5043..5291
                     /locus_tag="ACFJCW_001382"
     CDS             5043..5291
                     /locus_tag="ACFJCW_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HFC4151508.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALIHGHSETDKGHLIPMLEKIRRA"
     gene            5403..6686
                     /gene="gltA"
                     /locus_tag="ACFJCW_001383"
     CDS             5403..6686
                     /gene="gltA"
                     /locus_tag="ACFJCW_001383"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HFC4151509.1"
                     /translation="MSKSIKLNVPGRAGLELPVLEASIGHDVVDIRGLTKNTGLFAFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDITNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            6891..9719
                     /locus_tag="ACFJCW_001384"
     CDS             6891..9719
                     /locus_tag="ACFJCW_001384"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HFC4151510.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMALRFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNAGKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQVEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREKIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLLTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRNMGEGLGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNDSVKRVVLCAGQVYYDLEAGRAERKLEDDVAIVRVE
                     QLYPFPYDEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            9819..11000
                     /gene="odhB"
                     /locus_tag="ACFJCW_001385"
     CDS             9819..11000
                     /gene="odhB"
                     /locus_tag="ACFJCW_001385"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HFC4151511.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATVAAEAPAAAPAEAAPAAVPAA
                     AQNNAAMPAAAKLAAETGVDVNVLQGSGRDGRVLKEDVQNAAAKPAAAVAPAVALPAG
                     ARPEERVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGV
                     KLGFMSFFVKAAVTALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDAD
                     QMSIADIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAIL
                     GMHATKERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPVRLLLD
                     L"
     gene            11261..12694
                     /gene="lpdA"
                     /locus_tag="ACFJCW_001386"
     CDS             11261..12694
                     /gene="lpdA"
                     /locus_tag="ACFJCW_001386"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC4151512.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHDFAEHGITVGDVKFDAAKMIERKDAIVIKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLSIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            12814..13101
                     /locus_tag="ACFJCW_001387"
     CDS             12814..13101
                     /locus_tag="ACFJCW_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151513.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQIYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAVMYLLARMWLPFSK"
     gene            13119..14339
                     /gene="sucC"
                     /locus_tag="ACFJCW_001388"
     CDS             13119..14339
                     /gene="sucC"
                     /locus_tag="ACFJCW_001388"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HFC4151514.1"
                     /translation="MGLAAGRFLKPTHLKEKSMNLHEYQAKELLASYGLPVQGGILAH
                     NGEEAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREKAKEVAESLIGTNLVTY
                     QTDANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETP
                     EKIFKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFAKLMTGAYKAFVENDFALFEVN
                     PLAVRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEG
                     KIGCMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVL
                     INIFGGIVRCDMIAEAIVAAVKEINVNVPVVVRLEGNNAELGAKILNESGLKLTSADG
                     LNDAAEKIVAAVNA"
     gene            14350..15240
                     /gene="sucD"
                     /locus_tag="ACFJCW_001389"
     CDS             14350..15240
                     /gene="sucD"
                     /locus_tag="ACFJCW_001389"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HFC4151515.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLDLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTNLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVTKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKAKGLA"
     gene            complement(15623..16009)
                     /locus_tag="ACFJCW_001390"
                     /pseudo
     CDS             complement(15623..16009)
                     /locus_tag="ACFJCW_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         4075 a         3980 c         4142 g         3869 t
ORIGIN      
        1 ctgtgtcggc aatgtttcag acgaaaacgg aaggacaaag attatgaaaa aaattcaagc
       61 ggatatcgtc gtaatcggcg gcggtactgc cggtatgggt gcgtttcgca atgcccgttt
      121 acattcggat aatgtttacc tgattgaaaa caatgtgttc ggcacaacct gcgcgcgcgt
      181 gggctgtatg ccttccaaac tcttgattgc cgccgcagaa gcgcgtcacc acgcattgca
      241 taccgacccc ttcggcgtgc atttggacaa agacagcatc gtcgtcaacg gagaagaggt
      301 tatgcggcgc gtcaaatccg agcgcgaccg ttttgtcggc tttgtcgtta ccgatgtgga
      361 agaatggcct gccgacaagc gcatcatggg ctcggctaaa ttcatcgacg agcataccgt
      421 ccaaatcgac gaccatatcc aaattgcggc aaaaagtttc gtgattgcta ccggttcgcg
      481 tcccgtcatc ctgccgcagt ggcagtcttt gggcgaccgt ttgattatca acgacgacgt
      541 tttctcgtgg gatacgctgc ctaagcgcgt tgccgtgttc gggccgggcg ttatcggttt
      601 ggaactgggt caggcattgc accgtttggg tgtgaaagtt gaaattttcg gtttgggcgg
      661 aatcatcggc ggcatttccg accccgttgt ttcagacgag gcgaaagccg tgttcggaga
      721 agaattgaaa ctgcatctgg atgctaaaac cgaggtcaaa ctcgacgcag acggcaatgt
      781 agaagtccat tgggagcagg atggcgaaaa aggcgtattt gttgccgaat atatgttggc
      841 agccgtaggt cgccgtccga acgttgacaa tatcggtttg gaaaacatca atatcgacaa
      901 agacgcgcgc ggcgtacccg ttgccgatcc gctgaccatg cagaccagca ttccgcatat
      961 ctttattgcg ggcgacgcgt ccaaccaact gcccctgctg catgaagccg ccgaccaagg
     1021 taagattgcc ggcgataacg cgggccgcta cccgaatatc ggcagcggtt tgcgccgcag
     1081 caccattggc gtggtgttta ccagtccgca aatcggcttt gtcggtttga aatacgcgca
     1141 ggttgccgcg caataccaag ccgacgaatt tgtcatcggc gaagtatcgt tcaaaaatca
     1201 aggtcgcagc cgcgtgatgc tggtaaacaa aggccatatg cgcctgtatg ccgaaaaagc
     1261 caccggccgc tttatcggcg cggaaatcgt aggccctgcc gccgaacatt tggctcactt
     1321 gttggcatgg gcgcatcaaa tgaagatgac cgttccgcaa atgctggata tgccgttcta
     1381 ccatcctgtt atcgaggaag gtctgcgtac cgcgttgcgc gatgccgatg cgaaattgaa
     1441 agcctgaccg atatggcaaa acaatgccgc ctgaaatttt tttcagacgg cattttattt
     1501 ttggggatgg ggttgggggt cggatgctga taccgtgtcg ggaagggagc ggcaaaacta
     1561 aaaatctttc ttttaatctg ctgtttccac gcgtgtttgt caaaatctat cagtttgttt
     1621 ttaaaataca ctgttcaaaa tgggataaaa caggtaaatt aacgttgatg taacccagtg
     1681 tagcaatggg tttacggttt ttgagtcgat atataactac agaggaattg actatgtctg
     1741 tcaaactgcg tcctgtttat ctggatttgc cgaacatccg tctgccgata cccgggatag
     1801 tttccatcct tcaccgcatt agcggggtcg ggctgtttat tatgctgcct ttcctgctgt
     1861 attttctgtc cggtaccctg agtcaagagt ctgcatttga aacttaccgt gccattgttt
     1921 cccatccttt ggtcaagctg gttttaatcg gtatattgtg ggcttatctg caccattctc
     1981 tcgccggtat ccgcttttta tttttggatg cgcacaaagg ccttgagctg aatactgcgc
     2041 gcaataccgc taaagccgta tttgcttctg cattggtttt gactgtcgtt ttgggagcgt
     2101 tgttatggta gaacgtaaat tgaccggtgc ccattacggt ttgcgcgatt gggtaatgca
     2161 gcgtgcgact gcggttatta tgttgattta taccgttgca cttttagtgg ttctatttgc
     2221 cctgcctaaa gaatatccgg catggcaggc attttttagt caagcttggg taaaagtatt
     2281 tacccaagtg agctttatcg ccgtattctt gcacgcttgg gtgggtatcc gcgatttgtg
     2341 gatggactat atcaaaccct tcggcgtgcg tttgtttttg caggttgcca ccattgtctg
     2401 gctggtcggc tgcctcgtgt attcagttaa agtgatttgg gggtaagtat gggttttcct
     2461 gttcgcaagt ttgatgccgt gattgtcggc ggtggcggtg caggtttacg tgcagccctc
     2521 caattatcca aatccggttt gaattgtgcc gttttgtcta aagtgttccc gacccgctcg
     2581 cataccgtag cggcgcaggg cggtatttcc gcctctctgg gtaatgtgca ggaggaccgt
     2641 tgggactggc acatgtacga taccgtgaaa ggttccgact ggctgggcga ccaagatgcg
     2701 attgagttta tgtgtcgcgc tgcgcctgaa gcggtgattg agttggaaca catgggtatg
     2761 ccttttgacc gcgttgaaag cggcaaaatt tatcagcgtc ctttcggcgg acatactgcc
     2821 gaacatggta aacgtgcggt agaacgtgca tgtgcggttg ccgaccgtac cggtcatgcg
     2881 atgttgcata ctttgtacca acaaaacgtc cgtgccaata cacaattctt tgtggaatgg
     2941 acggcgcaag atttgattcg tgatgaaaac ggcgatgtcg tcggcgtaac cgccatggaa
     3001 atggaaacgg gcgaagttta tattttccac gccaaggccg tgatgtttgc taccggtggc
     3061 ggcggtcgta tttatgcttc ttctaccaat gcttatatga ataccggtga cggtttgggc
     3121 atttgcgccc gtgcgggcat tccgttggaa gatatggaat tctggcaatt ccacccgacc
     3181 ggcgtggcgg gtgcgggcgt gttgattacc gaaggcgtac gcggcgaggg cggtattctg
     3241 ttgaacgccg acggcgaacg ctttatggaa cgctatgcgc cgaccgtaaa agacttggct
     3301 tctcgcgacg tggtttcacg cgcgatggcg atggaaatct atgaaggtcg cggctgtggt
     3361 aaaaacaaag accacgtctt actgaaaatc gaccatatcg gtgcagaaaa aattatggaa
     3421 aaactgccgg gcatccgcga gatttccatt cagtttgccg gtatcgatcc gattaaagac
     3481 ccgattccgg ttgtgccgac tacccactat atgatgggcg gcattccgac caattatcac
     3541 ggtgaagttg ttgttccgca aggcgacgag tacgaagtac ctgtaaaagg cctgtatgcc
     3601 gcaggtgagt gcgcctgtgc ttccgtacac ggtgcgaacc gtttgggtac gaactccctg
     3661 ctggacttgg tggtgttcgg caaagctgcc ggtgacagca tgattaaatt catcaaagag
     3721 caaagcgatt ggaaacctct gcctgctaat gccggtgagt tgacccgcca acgtatcgag
     3781 cgtttggaca gtcaaaccga tggtgaaaac gttgatgcat tgcgtcgcga actgcaacgc
     3841 tccgtacaac tgcacgccgg cgtgttccgt accgatgaga ttctgagcaa aggcgttcaa
     3901 gaaatcatgg cgattgccga gcgtgtgaaa cgtaccgaaa tcaaagacaa gagcaaagtg
     3961 tggaataccg cgcgtatcga agctttggaa ttggataacc tgattgaagt ggcgaaagcg
     4021 actttggtgt ctgccgaagc acgtaaagaa tcacgcggtg cgcacgcttc agacgaccat
     4081 cctgagcgcg atgacgaaaa ttggatgaaa cacaccctgt atcattcgga caccaatacc
     4141 ttgtcttaca aaccggtaca caccaagcct ttgagcgtgg aatacatcaa accggccaaa
     4201 cgcgtttatt gatgcgtttt cagacggtct tcgcctcaaa ggtcgtctga aacctaacca
     4261 tacccacatt gaactgcttg aatttataat acaaaatcat tgggcagttg atgagaaaag
     4321 gaacacttct catggaaaaa atgagttttg aaatttaccg ttacaacccg gacgttgatg
     4381 ccaagcctta tatgcagcgt tacgagttgg aattggaacc gaccgacgtg aaacttttgg
     4441 acgctttggt acgcctgaaa gcacaagacg ataccttgtc tttccgccgc tcctgccgcg
     4501 aagggatttg cggatcggac ggtatgaaca tcaacggcaa aaacggcttg gcgtgtctga
     4561 ccgatttacg cagcttgaaa cagcctgtca aaatccgccc gctgcccggt ctgcccgtca
     4621 tccgcgacct gattgtggat atgacccagt tcttcaaaca ataccattcc gtcaaacctt
     4681 atgttgttaa cgacaatccg attgatgcgg acaaagagcg tctgcaaact caggaagagc
     4741 gcaaagagtt ggatggtttg tacgaatgta ttttgtgcgc ctgctgttcg accgcctgtc
     4801 cgtcattctg gtggaatccc gacaaattcg tcggtccgtc cggcttgctg aacgcctacc
     4861 gcttcattgc ggacagccga gataccatca ctaatgagcg tttggataat ttgaacgatc
     4921 cgtaccgttt gttccgctgc cacaccatta tgaactgcgt ggacgtatgt cccaaacact
     4981 tgaatccgac ccgggccatc ggtaagatta aagagattat gttgaaacgg gttgtttaag
     5041 aaatgatggt ttttgacgac attgccaaac ggaaaatccg ttttcaaacc cgccggggat
     5101 tgttggaact agatttaatc ttcggcaggt ttatggaaaa agaattcgag catttgagcg
     5161 ataaagagct gtccgagttt tccgaaatcc ttgaatttca agatcaagaa ttgcttgcct
     5221 tgattcacgg gcattcggaa acggacaaag ggcaccttat cccgatgctt gaaaaaatca
     5281 gacgggcatg aggcatctga aatttgtctg agggcagatt tcaaaatgca aaggccgtct
     5341 gaaagcaaag aacgtgctgc ggatgcagta acgtgggtta taacttgcaa aggagcgata
     5401 atatgtccaa atcaatcaaa ctcaacgtac cgggtcgggc aggtttggag ctgccggtat
     5461 tggaagccag catcgggcat gatgtggttg acattcgggg gctgacaaaa aatacaggtt
     5521 tgtttgcctt cgaccccgga tttgtttcaa ccgcaagctg tgagtctaaa attacttaca
     5581 tcgacggcga tcaaggcttg ctttattatc gcggataccc catcgagcag ctggccgaaa
     5641 agtccgatta tttggaagtc tgctacctgt tgatttacgg cgaactgccg actcccgagc
     5701 aaaaggcaga atttgacaat acagtccgcc gccacacgat ggtgcatgaa cagctgactt
     5761 ggttcttccg gggtttccgc cgcgacgcgc atccgatggc gatgatggtc ggcgtggtcg
     5821 gcgcgctgtc tgcgttctac caagacagct tggacattac taatcccgaa caccgcaaaa
     5881 tcgcgattta ccgccttatt tccaaaatcc cgaccattgc ggcaatgtgt taccgctatt
     5941 caaacggtct gccgttcaat tatccgaaga ataatctttc ttattccgaa aacttccttc
     6001 atatgatgtt tgccacaccg tgtgaagact acaaacctaa tcccgttttg gcacgcgcac
     6061 tcgaccgcat ctttattttg catgccgacc acgagcaaaa cgcctcaact tcaaccgtcc
     6121 gtctggcagg ctcttcgggt gcgaacccgt ttgcctgtat tgctgccggt atcgcctgcc
     6181 tgtggggtgc ttcgcacggc ggtgcgaacg aagccgtgtt gaaaatgctg gatgaaatcg
     6241 gcgatgtgtc caatgttgcc gcatacatgg aaggcgtgaa acagcgcaaa taccgcctga
     6301 tgggcttcgg acaccgggta taccgcaata tggatccgcg tgccagcatt atgcgcgaaa
     6361 cctgctatga agttttgaag gaattgggct tggaagacag cccgaaattc aaactggcga
     6421 tggaattgga acagattgcg ctgaaagacc cgttctttat cgaacgcaaa ctgtatccca
     6481 atgtcgattt ctattccggc atcgtcctgt ccgcgctggg catcccgacc gaaatgttta
     6541 ccgtcatctt cgccctgtcg cgcagcgtgg gctggatttc gcactggcac gagatgatta
     6601 gcgatccttc gctgaaaatc ggccgcccgc gccagcttta taccggttcg gaacgccgcg
     6661 attatgtgcc ggcaggcgag aggtaacata cattaatata ttgtcaaaca ggcaatatca
     6721 gagaaccgga ttgtttcctg aatccgtctg attgtagtcg gatgaaatca agacaagcaa
     6781 tccggtttaa aatagggtag aataaaatgt cttttcagac ggcatcagtt cagccgtcag
     6841 gacgcggact tctacccttt gtttatattt taaagaaaag agcgcacgcc atgatggacg
     6901 aaaaactcaa tttctcttat ctgttcggtt cgaacgcacc ctacattgag gaattgtacg
     6961 aggctttttt ggaaaacccc gatgcggttg atgaaaaatg gaagcagtat ttcaccgatt
     7021 tgagcaaaca gccggggacg gttgctgtcg atgtcgcaca cacaccgatt cgcgaatcat
     7081 ttgttacttt ggcgaaaaag aaaattgcat ctgccgttgc gggcggtgcg gatgaggcaa
     7141 tgctgaaaaa gcaagtcagc gttttacggc tgatttctgc ctatcgtatc caaggcgtgg
     7201 gtgcggccca acttgatccg ctcaaacgta tccctccgcg cgatattgaa gccctcgatc
     7261 cgaaattcca cggtctgtca gatgccgata tggcgcttcg attcaatatg ggcgagggtg
     7321 attttgccaa tcgcggcaaa ctgcccttgt cccaaatcat cagcaacctc aaacaaacct
     7381 actgcggcca catcgcattg gaatatatct atattcccaa taccgaagag cgccgttggg
     7441 tacgcaacta ttttgaaagc gtattgtcca caccgcatta caatgccgat caaaaacgcc
     7501 gtatcttgaa agagatgacc gctgccgaga ctttggaacg ttatctgcat accaaatatg
     7561 tcggtcagaa acgtttcggt gtcgaaggcg gcgaaagcgc gattgccggt ttgaactacc
     7621 tgattcaaaa cgccggtaag gacggcgtgg aagaagtcat catcggtatg gcgcaccgtg
     7681 gccgtctgaa tgttttggtg aacattttgg gcaaaaaacc cggcgatttg tttgccgaat
     7741 ttgaaggccg tgccgaaatc aaactgccta gtggcgacgt gaaataccat atgggcttca
     7801 gctccgatat tgccacccct cacggcccga tgcacgtttc tttggcgttc aacccgtcac
     7861 acttggaaat cgtcaatccg gtagtggaag gttctgcacg cgccaaacaa aaacgtttgg
     7921 gcgaaaacgg ccgcgataaa gtcttgccgg tattgattca cggcgattcc gcatttatcg
     7981 gtttgggtgt caaccaagca acattcaacc tgtctaaaac gcgcggttat accacaggcg
     8041 gtacggtcca tatcgtcatc aacaaccaaa tcggctttac cacttccgat atccgcgata
     8101 cccgttcaac cgtacactgt accgatatcg caaaaatggt ttccgctccg gttatccatg
     8161 tgaacggcga tgatcccgaa cgcgtttgct ttgccattca agccgctttg gattaccgca
     8221 aaaaattcca taaagacatc gtaatcgacg ttgtctgcta ccgtaaatgg ggtcacaacg
     8281 agggcgatga tccgactttg acccaaccga tgatgtacaa aaaagtatcg caacatccgg
     8341 gtgcgcgtgc tttgtacacc gagcaactga ttgccgaagg cgtggtaact caagttgagg
     8401 ccgacggtta catccaagcc taccgtgatg ctttggacaa aggcgaacat gttgagcaaa
     8461 caacgttgag caacttccaa cgcacacaaa tcgactggag caaataccaa ggtaaagatt
     8521 ggcgcgaaaa aatcgaaacc ggtttgcctg ccgccgacat tgagcgtctt actgagaaat
     8581 tcaccgctgt gccggaaggc tttgccctgc atccgactgc aaaacgtgtg atcgaagcgc
     8641 gtaaagccat ggcatccggc aaacaagcca tcgactgggg tatggccgaa accctcgcat
     8701 acgcaagcct gctgaccaaa ggtcatggcg tgcgtatctc cggtgaggac tccggccgcg
     8761 gtacattctc acaccgtcat gccgttctgc acgatcaaaa acgcgaaaaa tgggacgacg
     8821 gtacttatgt tcctcttcgc aacatgggcg aaggcttggg cgagttcctg gttatcgact
     8881 ctatcttgaa cgaagaagcc gtgatggcgt tcgagtacgg ctttgcctgc tccgctcctg
     8941 acaagctgac catttgggaa gctcaattcg gtgacttcgc caacggcgcg caagtaacta
     9001 ttgatcaatt cctgtcttca ggcgaaacca agtggggtcg cttgtgcggt ctgaccacca
     9061 tcctgccgca cggctacgac ggtcaaggcc ctgaacactc ttctgcacgc gtagaacgtt
     9121 ggttgcaact gtgttctgag aacaatatgc aagtcatcat gccgtctgaa gcgtcgcaaa
     9181 tgttccatct cttgcaacgc caagtcttgg gttcataccg caaaccgctg gtgattttca
     9241 tgtccaaacg cctgttgcgc ttcaaaggtg caatgagccc gctggaaaac ttcaccgaag
     9301 gttcgacttt ccgtccggtt attggtgata ccgccgaacg cgcaagcaac gacagcgtga
     9361 aacgcgtggt attgtgtgcc ggtcaggttt actatgactt ggaagccggt cgagccgaac
     9421 gtaaactgga agatgatgtc gctatcgtcc gcgttgagca gctgtatccg ttcccatacg
     9481 acgaggttaa agccgaactg gcgaaatatc cgaacgcaaa atctgtggtt tgggcgcaag
     9541 aagagccgaa aaaccaaggc gcgttctacc aaatccgcca ccgcatcgaa gacgttatca
     9601 gcgaagagca aaaactgtct tatgccggcc gtccaagcag cgcatcgcct gcagtgggct
     9661 actcaagcaa acacattgct caattgaaac aattggttga agacgctttg gcgttataaa
     9721 ccaagtagca ttccgtctga gtctgctcag gcggaatgcc catatgcaga attaaaaaca
     9781 cacaacaggc cgtctgaaag ggccattgga gacacaaaat gattattgat gtaaaagtac
     9841 ctatgctgtc tgaaagcgta tctgaaggca cactcttgga atggaagaaa aaagttggcg
     9901 aagcagttgc ccgtgacgaa atcctgatcg atatcgaaac ggacaaagtg gttttggaag
     9961 taccttctcc acaagccggc gtattggttg aaatcgtagc gcaagacggt gaaaccgttg
    10021 ttgccgacca agttttggcc cgtatcgata cagctgctac tgtcgctgct gaagcacctg
    10081 cagccgctcc tgccgaagct gccccggctg ccgttcctgc tgctgcacaa aacaacgccg
    10141 ccatgcctgc cgctgcaaaa ctggctgccg agaccggtgt tgacgtgaac gtattgcaag
    10201 gttccggccg tgacggtcgc gtattgaaag aagacgtaca aaatgccgct gccaaacctg
    10261 ccgcagccgt ggcccctgcc gttgcacttc ctgccggcgc acgtcctgaa gaacgcgtac
    10321 caatgagccg cctgcgtgcc cgtgttgcag aacgcctctt ggcttctcaa caagaaaacg
    10381 ccattctgac tacattcaac gaagtcaaca tgaaaccgat catggacttg cgtgcgaagt
    10441 acaaagaaaa attcgagaaa gaacatggcg taaaactggg ctttatgtcc ttcttcgtta
    10501 aagccgctgt tacagccctg aaaaaatacc cggttgtgaa tgcttctgtt gacggcaaag
    10561 acattgtgta ccacggctac ttcgacatcg gtatcgcaat tggcagccca cgcggtttgg
    10621 ttgtaccaat cctgcgcgat gccgaccaaa tgagcattgc cgacatcgaa caagcaattg
    10681 ttgattacgc gaaaaaagcc aaagacggca aaatcgctat cgaagacctg accggcggta
    10741 cattcagtat taccaacggc ggtactttcg gttctatgat gtccaccccg atcatcaacc
    10801 cgcctcaatc tgcgattttg ggtatgcatg ccactaaaga gcgcgctgtg gttgaaaacg
    10861 gccaagttgt tgtccgtcca atgatgtatc tggctctgtc ttacgaccac cgtatcattg
    10921 acggccgcga agctgtattg accttggtag ccattaaaga cgcgttggaa gacccggtcc
    10981 gcctgttgtt ggatctgtaa tcgtttcaga cggcttttta tttgttaatg aaaaggccgt
    11041 ctgaattttt atttagatgt agcgtaatgt agtatcgtgc tacaataggc tcaacgaacg
    11101 attgaggccg tctgaaacat ttgattcgaa tgaatcggca gatatggact ttcagacggc
    11161 tttttcttaa aaccatcaaa acgcagtcat tcaaaataaa aaaagaaacg aaaagtatcg
    11221 tttttatttt gagatactgc taaaagcaaa ggatgacacg atgtctcaat atgatgtagt
    11281 agtgattggt gcaggtccgg gcggatacgt tgccgccatc cgtgccgcac aactgggttt
    11341 caaaactgcc tgtgtcgatg caggcgttaa caaagcaggc aatgcccctg cattgggcgg
    11401 tacttgcttg aacgtaggct gtatcccttc taaagccctg ttgcaatcca gcgaacattt
    11461 ccacgctgcg caacacgatt ttgccgaaca cggtatcact gtcggcgacg taaaattcga
    11521 cgcggccaaa atgattgagc gcaaagatgc catcgtgatc aaactgaccg gcggcgtgaa
    11581 attcctgttc caaaaaaaca aagtaaccag cctgttcggt actgcttcct ttgccggtaa
    11641 aaatggcgat gcttaccaaa ttgaagtcga taacaaaggc gagaaaaccg ttatcgaagc
    11701 caaacacgtc atcgtagcaa ccggttccgt accgcgtccg ttgccgcaag tcgctatcga
    11761 caacgtgaac gtattggaca acgaaggcgc attgaacctg accgaagtac ctgccaaact
    11821 cggcgtaatc ggttccggtg tgattggttt ggaaatgggt tccgtatgga accgcgtggg
    11881 tgcggaagtt accattcttg aagccgcgcc gaccttcctg gctgccgccg accaacaaat
    11941 cgccaaagaa gccttcaaat acttcaccaa agagcaaggt ctgagcatcg aattgggtgt
    12001 gaaaatcggc gacatcaagt ctgaaggcaa aggtgtttcc gttgcttacg aaactgctgc
    12061 cggcgaagcc aaaaccgaag tattcgacaa actgatcgtt gccatcggcc gtattccaaa
    12121 caccaaaggc ctgaacgctg aagccgtagg cttggaaaaa gacgagcgcg gctttatcaa
    12181 agtagatggc gaatgccgta ccaacctgcc taacgtatgg gcaatcggcg acgtggttcg
    12241 cggcccgatg ttggcacaca aagccagcga cgaaggcgtt gccgttgccg agcgcattgc
    12301 cggtcaaaaa ccgcatatcg acttcaacaa cgtaccgttt gtgatttaca ccgaccctga
    12361 aatcgcttgg gtgggtaaaa ccgaagagca gctcaaagcc gaaggcgtgg agtacaaaaa
    12421 aggtacttca ggtttcggtg caaacggccg tgcattggca atgggcaaag ccaaaggtac
    12481 ggttaaagtg ttggcagatg ccaaaaccga ccgcatcttg ggcgtacaca tgatcggccc
    12541 ggttgtcagc gaattggtta ccgaaggcgt gactgcgctc gaattcttcg ccagcagcga
    12601 agatatcgcc cgtattatcc atgcccaccc aaccttgtcc gaagtggttc acgaagctgc
    12661 attggcggcc gacaaacgcg ctttgcacgg ttgatagaca ttaaggccgt ctgaaatttt
    12721 cagacggcct taaggcctcc ggcaaattga atgttccgag agcttcgttt tctgatttat
    12781 aattccgtca gacaaacagc atttacattc attatgaaca aagaaatagt cggtattttc
    12841 tttataccga tgggcatcat cagcatgtgt atggccgcat tgtggcagat ttatgtgatg
    12901 atgaccgaaa cttatacgct caaccgtttc aaagataaag aattggtttg gcgcgtggca
    12961 ttgttgttta tcagtttcag ccttgccgtt tatctgctct gtccgaattc gcgtaaaaaa
    13021 ggcatcgtct tttttattct cgggggaggc ggtgcagtca tgtatctgct ggcgcggatg
    13081 tggttgccct tcagtaaata gtaggaccgt ctgaaaatat gggattggcc gcagggcgat
    13141 tcctaaaacc cactcacctt aaggagaaat ccatgaattt acacgagtat caggctaaag
    13201 aactgctggc tagctacggt ttgcccgtac aaggcggtat tttggcgcac aacggcgaag
    13261 aagccgctgc agcttacgac aaattgggcg gcaaattcgc tgttgtcaaa gcacaggtac
    13321 acgccggcgg ccgcggtaaa gcgggcggcg taaaagtcgt taaaagccgc gaaaaagcca
    13381 aagaagtggc tgaaagcctg attggcacca acttggtaac ttaccaaacc gatgccaacg
    13441 gccaacctgt caacagcgtt ttggtttgcg aagatatgta tcctgttcaa accgagctgt
    13501 acttgggcgc agtggttgac cgttctaccc gccgcgttac attcatggct tctaccgaag
    13561 gcggcgtgga aatcgaaaaa gttgctgctg aaactccaga aaaaatcttc aaagtaaccg
    13621 ttgatccgct ggtcggcctg caaccttgcc aagctcgcga agttgccttc caactgggct
    13681 tgaaagacaa acaaatcaac gagttcgcca aactgatgac cggcgcgtac aaagcgtttg
    13741 tcgaaaacga cttcgccctg tttgaagtca acccgctggc agttcgcgaa aacggcgcac
    13801 tggcttgcgt ggacggcaaa atcggcatcg acagcaacgc gctctaccgc ctgccaaaaa
    13861 tcgctgaatt gcgcgacaaa tctcaagaaa acgaacgtga actgaaagct tctgaattcg
    13921 acctgaacta tgttgccctg gaaggcaaaa tcggctgtat ggttaacggt gccggtttgg
    13981 cgatggccac catggacatc atcaaactca aaggcggcca acctgccaac ttcttggacg
    14041 ttggcggcgg cgcaaccaaa gaccgcgtgg ttgaagcgtt caaactgatt ttggaagaca
    14101 aatccgttaa aggcgtattg atcaacatct tcggcggtat cgtacgttgc gacatgattg
    14161 cggaagccat cgtggcagcc gttaaagaaa tcaacgtcaa cgttcctgtc gttgttcgtt
    14221 tggaaggcaa caacgccgaa ctcggcgcga aaatcctgaa cgaatcaggt ctgaaactga
    14281 cttctgcaga cggtctgaat gacgcagccg aaaaaattgt tgcagccgta aacgcctaag
    14341 gagaaaagaa tgagcgtatt gattaataaa gacactaaag tattggttca aggtttcacc
    14401 ggtaaaaacg gtactttcca ctccgaacaa gctctggctt acggcactaa agttgtcggc
    14461 ggcgttaccc caggcaaagg cggtcaaacc cacctagacc tgcctgtatt caacaccatg
    14521 aaagaagccg ttaaagaaac cggcgctgac gcatccgtga tttacgttcc cgctccgttt
    14581 gtgttggatt ctatcgttga agccgttgat tcaggcgtag gcttggtcgt tgtgattacc
    14641 gaaggcgttc caactctgga catgctcaaa gccaaacgtt acttggaaac caacggcaac
    14701 ggtacccgct tggtcggccc taactgcccg ggcgtgatta ctccgggcga gtgcaaaatc
    14761 ggcattatgc cgggccacat ccacactccg ggccgcatcg gtattatttc ccgttccggt
    14821 acattgactt acgaagccgt ggcacaaacc accaacctgg gcttgggtca atcaacctgt
    14881 atcggtatcg gcggcgaccc gattcctggt atgaaccaaa tcgacgcact gaaactcttc
    14941 caagaagacc cagataccga tgccatcatc atgattggtg aaatcggtgg tactgcggaa
    15001 gaagaagcag ccgaatacat ccaatccaac gtaaccaaac ctgttgtcgg ttacatcgcc
    15061 ggtgttaccg ctcctaaagg caaacgcatg ggccacgccg gtgcgattat ctccggcggt
    15121 aaaggtactg ccgaagaaaa attcgccgcg tttgaaaaag ccggtatcgc ctacacccgc
    15181 agccctgccg agttgggcac gacgatgctg gaagtgttga aagcaaaagg tttggcataa
    15241 tcaggtttga caactgattg aacatcaaat gccgtctgaa accggaaatc gggtttcaga
    15301 cggcattttg tttgtcattt caaaaagagg cagcctcaac atactcacat tatttttgcc
    15361 ctttgaggca gtcagaatat agtggattaa aaacaaaata gtacaacact cgacgttgaa
    15421 ggtttaacca tggcatactc tgcggactta agaaacaaag ctttaaacca tagcggatta
    15481 acaaaaatca ggacaaggcg gcgggccgca gacggtacaa atggtacgga accgatccgc
    15541 ccggtgctcc atcaccttag ggaatcgttc cctttgggcc ggggcggggc aacgccgtac
    15601 cggtttttgt taattcgcta tacagcaggc gttggtggaa atcccgaata agcggttcaa
    15661 aacgtgtcgc tgccgcggca gccatataca gcgccttacg caccgcagac cttccgccga
    15721 agcagcggct tttgaatttg gtttccccgc tctccctcgg gtgcggggca atgccgacca
    15781 aacccgctat ccgtttgtgc gacagccgcc ccaattcggg cagcatcgcc atcagcgtag
    15841 ccgtcgttat cgaaccgatg cctttgattt gctccgccac ttgggctttg ccgtcaaaat
    15901 gcgtgcgggt gtggttgtcg atttgtttgt ccgattcgtc aatcagccgg tcaaaacggg
    15961 caatcagttg tttgacgctt tcgacttgcg tttcgtgaac ctgatgcaga cattttgtaa
    16021 tagctgccat tacgcctact aggatatata ccttctatat atagtg
//
LOCUS       DAXGCP010000053        15874 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.053, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000053 DAXGCP010000000
VERSION     DAXGCP010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15874)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15874)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15874
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.053"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            209..2593
                     /gene="ppsA"
                     /locus_tag="ACFJCW_001391"
     CDS             209..2593
                     /gene="ppsA"
                     /locus_tag="ACFJCW_001391"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HFC4151516.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTADAYRAFLAHNGLNERISAALAKLDVEDVSELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVTDADGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKKAMRH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYNQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVEVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRYAINGEKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEIIRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGSVYEPHEENPMLGFRGAARYVAESFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVGEGIESVSLNPDTVIETWLYLANELNK"
     gene            2814..4073
                     /gene="rho"
                     /locus_tag="ACFJCW_001392"
     CDS             2814..4073
                     /gene="rho"
                     /locus_tag="ACFJCW_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HFC4151517.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDSINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKIGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPASGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            4692..5996
                     /locus_tag="ACFJCW_001393"
     CDS             4692..5996
                     /locus_tag="ACFJCW_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HFC4151518.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDAAARMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFIMA
                     AYSGLMSWAILKAVGKICGGLRVGKDVEREGLDLNIHGEHVE"
     gene            complement(6090..7385)
                     /locus_tag="ACFJCW_001394"
     CDS             complement(6090..7385)
                     /locus_tag="ACFJCW_001394"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HFC4151519.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKAETCIIGGGLSG
                     LCTALPLAEHGHEAVVLEAARIGFGASGRSGGQVISDYACGMGEIEKQVGLEQAQWFW
                     QQSLQAVELVDERVRKHAIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDKAELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGVASAAAEAGAQIFEQSPMTRIEP
                     YQNGWLVYTPEGSVECKNVVYAVNTYVGLNPIFRPLERKAIAVSTFIIATEPLGARTK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPSRMTELVRQDMLKVFPQL
                     ADVRIEYSWGGECDITANLVPHFGRLTSNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFEQLCQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(7512..8399)
                     /locus_tag="ACFJCW_001395"
     CDS             complement(7512..8399)
                     /locus_tag="ACFJCW_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC4151520.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVIYSFNESKLVTVWGG
                     FSTKWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     NREAAEAYRQEKLAAEKAN"
     gene            complement(8399..9364)
                     /locus_tag="ACFJCW_001396"
     CDS             complement(8399..9364)
                     /locus_tag="ACFJCW_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HFC4151521.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTTIDEDLGRLNIAVSYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALTTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIINNLLIKMGIIREPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDSRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(9380..10504)
                     /gene="potA"
                     /locus_tag="ACFJCW_001397"
     CDS             complement(9380..10504)
                     /gene="potA"
                     /locus_tag="ACFJCW_001397"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HFC4151522.1"
                     /translation="MTATTASSAKPYLQIQGLVKKFGDNYAVDNIDLNIYQNEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIDARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIENHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(10782..11051)
                     /gene="rpsO"
                     /locus_tag="ACFJCW_001398"
     CDS             complement(10782..11051)
                     /gene="rpsO"
                     /locus_tag="ACFJCW_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HFC4151523.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(11132..11266)
                     /locus_tag="ACFJCW_001399"
     CDS             complement(11132..11266)
                     /locus_tag="ACFJCW_001399"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151524.1"
                     /translation="MWSDVKCRLKPEDVSVFRRHFADIAKYRAEQQKLCDNALFLFQE
                     "
     gene            complement(11256..12191)
                     /gene="secF"
                     /locus_tag="ACFJCW_001400"
     CDS             complement(11256..12191)
                     /gene="secF"
                     /locus_tag="ACFJCW_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HFC4151525.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVARGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKMGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVNNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHTVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIAKEAKQKEEIVV"
     gene            complement(12195..14048)
                     /gene="secD"
                     /locus_tag="ACFJCW_001401"
     CDS             complement(12195..14048)
                     /gene="secD"
                     /locus_tag="ACFJCW_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HFC4151526.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALKNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAENSLTVPLQDAGDVQKALPQLLKLFPEATLNSEGSNIVLALSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPIIQQSGLDRIVVQLPGVQDTAKAKDIIGRTAT
                     LEVRMVEDDPAKLREALEGNVPSGYELLSSGGEHPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(14259..14525)
                     /gene="yajC"
                     /locus_tag="ACFJCW_001402"
     CDS             complement(14259..14525)
                     /gene="yajC"
                     /locus_tag="ACFJCW_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HFC4151527.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKAGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKAD"
     gene            14656..15774
                     /locus_tag="ACFJCW_001403"
     CDS             14656..15774
                     /locus_tag="ACFJCW_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HFC4151528.1"
                     /translation="MPLTRLFLKLYALLRLFLGKNAQTAWIFHPSCTGHDPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTVEAEEISDTRLALVRSSKYLNRLESCLPEDGKICRL
                     DDDTVISKNSLSAARFSAGSAVQAVDMVMKRKAWHAFCAARPPEHHAKSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NGMPDGGNMVHLPLPSGTGNRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASSCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLNPTKKRFAKPKTGQVRQPTQSDRYDINAV"
BASE COUNT         3967 a         4345 c         3988 g         3574 t
ORIGIN      
        1 caaaaccatc tgttttacaa aggaaatacc cgaaaaaaac aatatgcctg ccatcggttt
       61 caaaccgcta cacagccgga acccgctatt tttcagacgg cgcagcggtt gtccggacag
      121 ataaaaacgt gacagcggcg gaacgaatcg cttaaaataa gcaagcggat ttgtttcttt
      181 tttaacatat tttggattgg acacacaaat ggccgacaac tacgtaatct ggtttgaaaa
      241 cctgcgtatg acagatgttg aacgcgtggg cggtaaaaac gcctcgctgg gcgaaatgat
      301 cagtcaactg accgaaaaag gcgttcgcgt ccccggtggc tttgccacca cagccgatgc
      361 ctaccgcgca tttctcgcac acaacggtct gaacgaacgc atttccgccg ctctggcaaa
      421 attggatgtc gaagacgttt ccgaactggc acgcgtcggc aaagaaatcc gccaatggat
      481 tttggacacg cccttccccg aacagctcga tgccgaaatc gaagcggcat ggaacaaaat
      541 ggttaccgat gccgacggcg cggacatttc cgttgccgta cgctcttccg caaccgccga
      601 agacctgccc gacgcatcat ttgccggcca acaggaaacc ttcctgaata tcaatggctt
      661 ggataacgtt aaaaaagcga tgcgccacgt tttcgcctcc ctgtacaacg accgcgccat
      721 ttcctaccgc gtccacaaag gcttcgaaca cgacatcgtc gccctttccg ccggcgttca
      781 acgcatggtg cgttccgaca gcggcgcatc aggtgtgatg ttcaccctcg acaccgaatc
      841 cggctacaac caagtcgtct ttgttacctc ctcttacggt ctgggcgaaa acgtcgtaca
      901 aggcgcggtc aacccggacg aattttatgt gttcaaaccc acgctcaaag caggcaaacc
      961 cgccatcctg cgcaagacca tgggttcgaa acacatcaaa atgattttca ccgacaaagc
     1021 cgaagccggc aaatcggtaa ccaacgtcga agtccccgaa gaagaccgca accgcttctc
     1081 cattaccgac gaagaaatca ccgagttggc acactacgcg ctgaccatcg aaaaacacta
     1141 cggccgcccg atggatatcg aatggggacg cgacggcctg gacggcaaac tctacatcct
     1201 gcaagcccgc cccgaaaccg tcaaatccca agaagaaggc agccgcaacc tgcgccgcta
     1261 cgccatcaac ggcgaaaaaa ccgtcttgtg cgaaggtcgt gccatcggtc aaaaagtcgg
     1321 tcagggcaag gtgcgcctga ttaaagatgc ttccgagatg gattccgtcg aagccggcga
     1381 cgtactggtt accgacatga ccgatccgga ttgggaaccc gtgatgaaac gtgcttccgc
     1441 catcgtgacc aaccgcggcg gacgcacctg ccacgccgcc atcatcgcgc gcgaactggg
     1501 tattcctgcc gtcgtcggct gcggcaatgc gaccgaactc ttggaaaacg gtcaggaagt
     1561 taccgtatcc tgtgccgaag gcgataccgg ctttatctat gccggcctgc tggacgtaca
     1621 aattaccgat gtcgccttgg acaatatgcc aaaagcaccc gtcaaagtca tgatgaacgt
     1681 cggcaatccc gaactcgcat tcagcttcgc caatctgccc agcgaaggca tcggcttggc
     1741 gcgtatggaa tttatcatca accgccaaat cggcatccac ccgaaagcct tgttggaatt
     1801 tgacaaacaa gacgacgaac tgaaagcgga aattatccgc cgcatcgccg gttacgcatc
     1861 ccctgtcgac ttctacgtcg ataaaatcgc cgaaggcgtg gcaacgcttg ccgcatcggt
     1921 ttatccgcgt aaaaccatcg tccgtatgtc cgacttcaaa tccaacgaat acgccaacct
     1981 ggtcggcggc agcgtatacg aaccgcatga agaaaacccg atgttgggct tccgtggtgc
     2041 ggcgcgttat gttgccgaga gcttcaaaga ctgtttcgcc ttggaatgca aagccttgaa
     2101 acgcgttcgt gacgaaatgg gtctgaccaa cgtcgaaatc atgattccgt tcgtccgcac
     2161 tttgggcgaa gccgaagcag tggttaaggc attgaaagaa aacggcttgg aacgcggcaa
     2221 aaacggcctg cgcctgatta tgatgtgcga gctgccgagc aacgcggtat tggcggaaca
     2281 attcctgcaa tacttcgacg gcttctccat cggctcgaac gacatgaccc agctgaccct
     2341 cggcctcgac cgagacagcg gcttggtgtc cgaatcgttt gacgaacgca accctgccgt
     2401 caaagtgatg ctgcatcttg ccatctccgc ctgccgcaag cagaacaaat atgtcggtat
     2461 ctgcggtcaa ggtccgtccg accatccgga ctttgccaaa tggctggttg gagaaggcat
     2521 cgaaagcgtg tctctgaacc cggataccgt catcgaaact tggctgtatt tggcgaatga
     2581 attgaacaaa taatcaattc ccataccccc aagcctgaaa agcgcggggg tattttttcc
     2641 aagcagctcc gttcagacgg catttcctgt cgatgccccg tccgcgataa tatttgacac
     2701 ccacgcgccg actgcctaca attcccccct ctccgagcaa ccggcaacag tcagcttctt
     2761 ctttcagacg gcatccaccc gtcttttcct ttctattcta tatatcattg attatgcacg
     2821 tctccgaatt acaaaccctg cacatttcca aactcttaga attggcggaa gaacacggca
     2881 tcgaaaacgc caaccgattc cgcaaacaag acctcgtatt tgccatcgtc cgccagatga
     2941 tgaaaaaagg cgagggtttt acctgctccg gcacgctcga aatcctgccc gacggcttcg
     3001 gcttcctccg cagcgcggac acgtcctatc ttgccggccc cgacgacatc tatgtctcgc
     3061 ccactcaaat ccgccgcttc aacctgcata cgggcgacac catcgaaggc agcgtgcgcg
     3121 tccccaaaga caacgaacgc tattttgcct tggtcagact ggattccatc aatggcgacc
     3181 acccggaagt atgccgccat aaaatcctgt ttgaaaacct gaccccgctg tttccgaccg
     3241 aacagttgaa gctggaacgc gacttaaagt ccgaagaaaa cctgaccgga cgcgccatcg
     3301 acctgatttc gcccatcggc aaaggtcagc gcgccctctt ggttgccccg cccaaaatcg
     3361 gtaaaaccgt gatgctgcaa aacattgccc acgccgttac cgcaaactat cctgaagtcg
     3421 aactcatcgt cctcttgatt gacgaacgcc ccgaagaagt aaccgaaatg agccgttccg
     3481 tccgaggtga agtagtctcc tccacctttg acgaaccggc gcaacgccac gtccaagttg
     3541 ccgaaatggt gcttgaaaaa gccaagcgta tggtggaaca caaaaaagac gtggtcatcc
     3601 tgctggattc gattacccgc cttgcccgcg cctacaatac cgtcgtcccc gcctcgggca
     3661 aaatcctgac cggcggtgtc gatgccaacg cgctgcaccg ccccaaacgt ttcttcggtg
     3721 cggcgcgcaa cgtggaagaa ggcggttcgc tgaccattat cgccaccgca ttggttgaaa
     3781 ccggcagccg tatggacgat gtgatttacg aagaattcaa aggtaccggc aatatggaat
     3841 tgcacctcga ccgccgtatg gcggaaaaac gcctcttccc cgccatcaac atcaacaaat
     3901 ccggcacgcg ccgcgaagag ctgcttgtgc cgaacgacca gttgcaacgt atgtggttac
     3961 tgcgcaagtt cctgcacccg atggacgaaa tcgaagctac cgagttctta aacggaaaaa
     4021 tcaaagcatc taaaaataat gatgatttct ttgaactgat gcgcggaaaa taaacgcgcc
     4081 gcccgcatta atgcgaaatg ccgtctgaag cctgaaaatc gggtttcaga cgacattttc
     4141 attcgcacgg ccggcgcagc tcctcccccc ccccgctaac ggcgcaaccg ccggcagtgt
     4201 ccgtgtccgc ctgccgaagg cgcggccttt gcaaaaccgg ctcgaacgca tccctaccgg
     4261 caatgaaaac cgatgcggga acttgattca aggttgcgcc gaaccgcgcc catttttgta
     4321 taaattttat tttctatttc caattagaaa tttttaatat attaatcaat aaattaattt
     4381 tataaaataa aaatattgtc aacaatcttt tgacttatcg cccaaacctc tgtatatttt
     4441 cctacagtaa attgttgaca atccatacgc ccgcatatgc gccgcctaag gataaatcct
     4501 cccgccggac aacgggggca agggatggga tgcgatattt ccatattcaa acaagggatt
     4561 tgtttcacgc acagggcggc acatcggcaa aatccccgcg ccggtccggc agggcttgcg
     4621 cccatcccgg acaagccccg accccgcctt tccgaaagac gggcccaacc attaaggaaa
     4681 ctttaatcaa aatgaaaaaa cacatatggg cggcatcttt gctgccggca tccctatcgg
     4741 cagaaccttt aaactggtgg aaaccttatt ccgccgtcaa ttcgggcgat accgcctggg
     4801 tgatgactgc ggctgccttg gtactgttga tgacgcttcc cgggctggct ttattctacg
     4861 gcggtatggt gcggaaaaaa aacctgctct cgacgatgat gcacagcttt tccatcgcga
     4921 cattggtggg catcctttgg gtcgccgtcg gctattcttt ggcgttcacg ccgggaaatg
     4981 cctttatcgg cggtttgggg cgcgtatttt taagcgggat gcagatagac gctgccgcac
     5041 ggatgctgac cgtgtcgccc aatgcgccga ctgttcccga accggtattt atgttttttc
     5101 agatgacgtt tgccattatt tcgactgcca ttattaccgg cgcgtttgcc gaacgaatga
     5161 aatattcggc aatgatgctg ttttcgggca tatggttttt attggtttat gtgccgggcg
     5221 cgcattgggt gtggggcggc ggctttatga gcaagggcgg cgtattggat tatgccggcg
     5281 gtacggtggt gcacatcaat gccggtatcg cgggactcgt cgccgccttg gttttgggca
     5341 ggcgcatagg ctacgggcgc gaggcgatgc ctccgcacaa tatggcgatg acgctgattg
     5401 gcgcggcaat gttgtggttc ggctggttcg gctttaacgc tggttcggcg cttgcggcag
     5461 acgcggcggc ggggatggcg atggcggtaa cgcaggtgtc ggccgtattc ggcgcggcag
     5521 gctggcttgc ctgcgagaaa atagcgggac acaaaccttc tgctttgggg ctggcttccg
     5581 gcgcagtttc cgggctggtc ggcatcaccc ctgccgccgg ctttaccggt ccgtcgggcg
     5641 cggccgccat cggtatattg actgccgccg cgtgctttgt gtccgtcacc gtcgtcaaac
     5701 acaaattgcg ttacgatgat tctttggacg ctttcggcat acacggattc ggcgggctgg
     5761 taggcggaat attgaccggc atctttttcg acaaccgcat tttcggtggg gatgcggcag
     5821 tttggcagca gttgtggata caggtaaaag acgggttcat tatggcggca tacagcgggc
     5881 tgatgagttg ggcgattttg aaggctgtgg ggaaaatctg cggcggtctg cgcgtcggca
     5941 aggatgtcga acgcgaaggt ttggatctga atatccacgg cgaacacgtg gaataaggac
     6001 ggctatgccg tctgaagcct gaaaatcggg tttcagacgg catttttcac gtttgccgcc
     6061 gatggggata aacatactgc ctgcgacgct taacggctgt ctttccactg ataatatttc
     6121 gagccgagga aagaaccgag tttgcgcaaa aacggttgca ggataatatt cggctggcac
     6181 aactgttcaa acggtttcag acggcattcg tcccctaaaa ttgcttcggc aaccgccagg
     6241 cctgcaatgc ccgttatcgc catcccgtgc ccggaataac cttgcgtata aaaaacattc
     6301 gaggtcaaac gtccgaaatg cgggacaagg ttggcggtaa tatcgcactc cccgccccac
     6361 gaatattcga ttctaacatc ggcaagctgc ggaaaaactt taagcatatc ttggcggaca
     6421 agctcggtca tacgcgaagg attgtcgata aattcgttat ccttaccgcc gaaaagcagc
     6481 ctgccgtccg cgctgaggcg gtaataatcc aaaatatggc ggttgtcgca tactgccata
     6541 ttgttgcgga taagcccttt tgtgcgcgcg cccaagggtt cggtggcaat aataaaggtg
     6601 ctgacggcaa tcgccttgcg ttccaaaggc cggaatatcg ggttcaaacc gacataagta
     6661 ttgacggcat agaccacatt tttacactcg acgctgcctt cgggcgtgta aaccagccaa
     6721 ccgttttgat acggttcgat gcgcgtcatc ggggattgct cgaaaatctg cgcgccggct
     6781 tcggcagcgg cgctggcaac acccaacgtg taattgagcg gatgaagatg cccggacaag
     6841 ggatcgaact gtgcgccttg gtacatatcg ctgtcaagct gctgtttcaa ctcggcttta
     6901 tcccaaagtt gataatgact cgcaccgtaa tgccgttggg cgtgttcatg ccactgctgc
     6961 aactcttccc aatgctgcgg acggacggca accgtggcat aaccgcgctg ccaatcgcaa
     7021 tcgatggcat gtttgcggac gcgttcgtcc accagttcga ccgcctgcaa agactgttgc
     7081 caaaaccatt gcgcctgctc caagccgacc tgtttttcaa tttcccccat accgcaggcg
     7141 tagtcgctga taacctgccc gccactcctg ccggacgcgc cgaagccgat acgtgcggct
     7201 tccaaaacga cggcttcatg tccgtgttcc gccagcggca atgcggtaca caaaccgctc
     7261 aaaccgccgc cgataatgca ggtttcggct ttcagacggc attggagttt cggataaaca
     7321 gtatgcggat taaccgaact aaaataataa gaaggcagat attcttgaaa atcagggcga
     7381 atcattgtgt ttgctttatc gggtatattt tcggacggaa tgatacaggc tgtcgggcca
     7441 tatcgtccaa acagaaaatc ggttgaaaaa aaacaggctg acccagtcat gcggtcagcc
     7501 tgccttatta attaatttgc tttctcggca gccaattttt cttggcggta ggcttctgcc
     7561 gcttctcggt tgcgcttggt tgcctgcctc atcatccaat aattgacgat gatgaccaat
     7621 gttccgatga tgccgatcag gatggttgcc aagacattca tctgaggatc gagacccaac
     7681 ttgatcttgg agaaaataac ctgcggcaat gtggatgaac cggggccgga gaggaatgag
     7741 gtaattacca aatcatccaa agacaaggta atgccgagta ggaagcctga agcaatggca
     7801 ggggcaatca aaggcaaagt gatgacaaaa aagattttca gcggacgcgc gcccaagtcc
     7861 attgcggctt cttcgagcga ctggtcaagc tcgaccagcc gcgaacggat gacaacggta
     7921 atgtatgcca tgcacagcgt cgtatgtccg aggaagatgg tgaaaaagcc gcgatcgaag
     7981 tagagatgtt gcaaccattc gctgccctgc aaaaatatct gcacctgaat aatcagcagc
     8041 agcatagaca gaccggtaat cacgtcgggc atgaccatgg gcgcggaaat cataccggca
     8101 aacagcgtgc tgccgcgaaa gcgtttgata cgcgccatcg catagcccgc cagcgtgccc
     8161 aaaacgacgg cggcaagcga agacacaacg gcaatccgca gcgacagcca agcggcttcc
     8221 aaaatggtgt cgttttccag caatgcgccg taccacttgg tcgaaaagcc gccccaaacg
     8281 gtaacaagtt tggattcgtt gaacgaatag atgaccaaaa caaccagcgg gatatacaga
     8341 aacgccagcg atagtgccaa catcagtttc aagaaccaag ataatttgga tttctgcatt
     8401 atttggctcc ttcttccaat tcgcggtttt catagtgctg gaacagggca atcggtacaa
     8461 ccagtagcgc gaccatcacg acggcgacgg cagaagccaa cggccagttg ttttgatcaa
     8521 agaatgcctg ccacaatact ttaccgatca tcaggttttc cgaaccgccg accagctcgg
     8581 gaatgacgaa ctcaccgaca gcggggacga aaaccagcat cgaacctgca ataatgccgg
     8641 ttttcgacaa aggcagggta atcgtcaaga acgatttgac cggtcccgcg cccaagtcgg
     8701 aagccgcttc gagcaggcgg ctgtccagtt tcaccagctg cgtgtaaagc ggcagaatca
     8761 taaacggcag ataggcataa accattacca aatttaacga aaacgcatta tagaacaaat
     8821 ctaatggttc tctgataata cccatcttaa tcaataagtt gtttatgatg ccgttatgcc
     8881 cgagcaaacc catccacgca tagacacgca gcaggaacga tgtccaaaaa ggtaacatga
     8941 tggcaagcag caaaccattg cggacggaag gattggcacg ggaaatcgca taggcggtcg
     9001 ggtaaccgac caacaggcaa atcaccgtcg tcgtcagcgc agtcttaatt gaagaccaat
     9061 aagtcatcag atagatatta ctgttttcac tgtcgccgaa ggggttaagg gtatgccaaa
     9121 aattttggaa aatatcggca tagttttgat agctgacggc gatgttcagg cgacccaaat
     9181 cctcatctat cgtcgttaaa ggagtaaacg gtggaatggc gatttcttgt tcggcaaagc
     9241 tgattttcag cacgatggcg aacggaatca gaaacagcac caaaagccaa atatacggta
     9301 cggcaatcac cgcacgctgc cccggacggc ggaacagttt gtttttcagt ttattaaggt
     9361 tcatctcact ccccttaaat caacggaaca acggagtcgg ttggttttcc ggccagctga
     9421 tatagacggt ttcatcccaa gtcggcggcg tgatgttacg cacataccag taaggtgcag
     9481 gaacttggct tttgacgacg cgcccgttgg cgagtttgat atggtatatg gcgaagctgc
     9541 ccaaataggc aatttctttt accgtgcctt tcgcccagtt gtagtcgccc aaatattcgg
     9601 gtttttcttt atataaatca atatcctctg gtcgaatact aacccaaaga tcctgctcgc
     9661 tcgggccacc caaaccatgg tcgatacgga cgtggttttc caaaccttcg cattcgataa
     9721 cggcatagtc ggcatgattt tcaatcacca caccgtcaaa gatgttggtt tcgccgataa
     9781 actcggcagt gaagcggctg ttgggatagt cgtacacgtc gctgggcgtg ccgacctgct
     9841 gcaactgacc gtcggacata atggcgatgc gggtcgccat cgtcatcgcc tcttcttggt
     9901 cgtgcgtaac cataatgcag gttacgccga cttgttccag cgtattgacc aactcgagct
     9961 gggtttgctg gcgcaatttc ttatccaacg cccccaaagg ttcgtcaagc aacaggattt
    10021 tcggacgttt tgccaaactg cgcgccaagg cgatacgttg ctgctgacca ccggacaatt
    10081 ggtgcggttt gcgtttggca aatttggtca tctgaaccag acgcagcatt tcttcgacgc
    10141 gcgcatcgat ttcgccttta ggcattttgt cctgtttcag accgaaggca atgttttgct
    10201 ccaccgtcat atgcggaaaa agcgcgtaac tttggaacat catattgatg gggcggtcat
    10261 agggtgcaag tttggtaata tcttgaccat caaggatgat ttttccctga ttgggacttt
    10321 ccatacccgc cagcatacgc agcagcgtag attttccgct gccggaactg cccaaaaggg
    10381 cgaagatttc gttttgataa atgttcaagt cgatgttatc gacagcgtaa ttgtcaccaa
    10441 actttttcac caaaccttgg atttgcagat aaggtttggc tgaagacgct gtggttgcgg
    10501 tcataatggc aatactccaa taaaaagacg agtaccggca aaacggattt tcgaatgggt
    10561 gataaaaagc tgtttgattg ctggcgggag tcgcaacgtc tgatgccgtc tgaaactctt
    10621 gtgaagcgca cgggcagcat gaaataaaaa ggggttctaa agaaccccgc attatattag
    10681 tttataaggt ttttagggta ataaatatgg gtttgagctt gtcggaaagc aacagaaaag
    10741 aaaacaccgc ccatttttct gggcggtgtc ggaaagcgca attatttacg cagacccaag
    10801 cgggtaatca acgcgcgata cgtatcgggc tgggtacggc gcaaataggc caacaggcga
    10861 cggcgttggc tgaccatttt caacaggccg cgacggctgt ggtggtcttt ggggttggct
    10921 ttgaagtggg gggtcagatc gttgatgcgg aaagtcaaca gggcaacttg tacttcagaa
    10981 gagccggtgt cgccttcttt acgttggaaa tctttaacga tttgtgcttt ttgttctacg
    11041 gtcagtgcca taatggaaaa actccgaaaa ataaaaagaa ccccaaatgg gattcggaca
    11101 agtttgccaa gcctcgacaa cggcaaactc cctattcctg aaacaggaac agcgcattat
    11161 cacacaattt ttgctgttct gcacgatatt ttgcgatgtc ggcgaaatgc cgtctgaaaa
    11221 cggagacatc ttccggtttc agacggcatt tgacatcaga ccacaatttc ttccttctgt
    11281 ttcgcttcct tggcgatatt gtcgcggctc aaaccgaaca tcagcaagag cgggctggca
    11341 accaatacgg aagagtagat gccgaacacg ataccgatgg tcagtgccat agaaaagccg
    11401 tgcaaggctg caccgccgaa caccagcata gaaacaacca tcgcctcggt cgaaccgtgg
    11461 gtaatgatgg tgcggctcat cgttgcggta atcgcgttgt caatgacttc cggcacggta
    11521 tgtccgcgca tcgccggctt gcggaaattt tcacggatac ggtcgaagac gacgacggat
    11581 tcgttcacag aatagcccaa tacggcaagg atacctgcca agacggtcag cgaaaattcc
    11641 cattggaaga aggcaaagca gccgagaata atcacgatgt cgtgcatatt ggcgataatg
    11701 gcagatacgg caaaacgcca ttcgaaacgc atcgacaggt aaataatgat gccgataacg
    11761 acaaaaccta aagccatcaa tccattattt accaattcct caccgacttg cgggccgata
    11821 aattcgactt ggcgcaaagt aacgtcggga ctgtcttttt tcagcaaatc cataacctga
    11881 ttggacaact gtgcggaagt aacaccttct ttgttcggca ggcggatcat gatgtgtttg
    11941 ttcgtaccca atgcctgaac ctgtacatca cccattttca gcgtatcgag gcgttcgcgc
    12001 atcttattga catccgcacc ctgctgatat tggacttcca ttaccgtacc gccggtaaat
    12061 tcgacagaga aattcaggcc tctggcaacc aaaaagaata cggcggcaat aaaggtaacc
    12121 aacgaaatga aggttgtcag tttgccgtag ctcataaacg gaatatcgcg tttgatttta
    12181 aagagttcca tagcttactc cttacctgcc gcagtttcgg cttcaggttt ccataccgca
    12241 ccgatggaaa tattctgcaa tttgcggcgg cggccgtacc acagattgac caacgcacgg
    12301 aatacgacga cggacgaata catcgaagtc agaataccca agcagtgtac gacggcaaaa
    12361 cctcttaccg gtccggaacc gaataccaaa agcgcgatac cggcaatcag cgaagtcagg
    12421 ttcgaatcaa caatggtcgc ccatgcgtgt tggaaaccga gattgattgc ctgctgcggc
    12481 ggcacgccgg cacgcaattc ctctcggata cgttcgttaa tcaagacgtt ggagtcgatt
    12541 gccataccca aagtcaacgc cagcgcggcc atacccggta acgtcaacgt tgcctgcatg
    12601 gcagacaaaa taccgattag gaacagtatg ttggcactca atgcaatagt agaaaagaaa
    12661 cccatcaggc ggtaataaac caccatgaat gcagcaacga tggcaaaacc ccataaagtc
    12721 gaatggaagc ctttttcgat gttctcctta cccaaagacg gaccgatggt acgttcttcg
    12781 acaatctgca tcggtgcggc aagagaaccg gcacgcaaca gcaaagacgt atcgttggct
    12841 tcggctgtcg tcatgcttcc ggaaatttcc acgcgtccgc cggtaatggc agtacggata
    12901 accggtgcgg ttacaacctc ggattttcct tggtcgatca aaaccatcgc catgcgtttg
    12961 ccgacatttg cggcagtcag ttcgccgaaa atgctgccgc ccgcgctgtc caagctcaga
    13021 ctgacggcag gtgcgcccat ttggtcgaaa ctcggttgcg catcgttgat gttgtcgccg
    13081 gtcagctcga cctgtttgct gatcagcaga gtttcgggat gctccccgcc gcttgaaagc
    13141 agctcataac cgctcggcac gttgccttcc aatgcctcgc gcaacttggc aggatcgtcc
    13201 tccaccatgc ggacttccaa agtcgcggta cggccgatga tgtcttttgc cttggcagta
    13261 tcttgcacgc cgggaagctg tacgacaatg cggtccaaac ctgactgttg gataatcggc
    13321 tctgccacac ccaattcgtt tacacggtta tgcagtgtag tgatgttttg cttcaccgca
    13381 tctgatcgta ctttattcac cgcctcttcc gaaagcgcca atacaatatt gctgccttct
    13441 gaatttaacg ttgcctcagg aaacagcttg agtaactgag gcagtgcctt ttgcacatcg
    13501 ccggcatcct gcaaagggac ggtcaggctg ttttcagcct gacgcaccgt gccgctgcgg
    13561 attttttcac ggcgcagttc gcggcggatg tcgcccgaat aacgctcaaa cgttttctgc
    13621 atcgcggctt tcatatcgac ctgcatggtg aaatgcacgc cgccgcgcag gtccaaaccc
    13681 aaaaacatcg gattggcttt gattttcgcc atccattcgg ggctgtccgc caacaggttg
    13741 agcgcggtaa tatacccttc gcccaaagtg ttttcgataa cgtcgcgcgc tttaagctgc
    13801 gtttctgtgt ctttgaaacg cactttcagt gaattatcca caacaaacat cccgtcggtc
    13861 tgaatgcccg cgtttttcag cgcagcatcc actttggatt gagtctgttc gttgatgatg
    13921 atggcttgtc ggttggtcga tacctgcacg gcgggcgttt cgccgaatag gttgggcagc
    13981 gaatacactg cggcaaccgc aatcgtgaac acaatcagca gatatttcca taaaggataa
    14041 cggttcatca ttgttcctta atggttggaa ccccaccctt tcggtggtgt cggaatcggg
    14101 ctatttcaga agaggcaaaa cccctccctg ccaggcaaga ccgaaaggca gcatcttgaa
    14161 tatgccgccc tgcgtgtcgg aacatggtca agccttcggt tggaattcaa aacaaagtgc
    14221 cgcattcggg ctttcccgat gcggcttgtc ggcacaaatc aatcggcttt tgcggcaatc
    14281 gcattgcgtt ccacttcgac ctcgattttt gtaccctgtc cgatatccac ggtaaaaaac
    14341 tgttcgccga ctctggttac cttacccttg aaacctgccg ccaagaccac tttgtcgccg
    14401 gctttcaagg cggcaagcat tgcctgatgc gctttgaatt tcttttgttg ggggcgcatg
    14461 atcaggaagt agaacaccac cataatcaac accaaaggag caaattgtgc aacagcttga
    14521 ttcataattt atccgttctt tctaaatatg attgaaaatc gagcggggta tataatagca
    14581 taagaccgta aacaatatat cgggtttgcc gcccataccc aaccgtatgc cgtctgcacc
    14641 ccctttcccg aacccatgcc gctgacccgc ctgttcctga aactctacgc cctgttgcgc
    14701 ctttttttgg gcaaaaacgc ccagaccgcc tggattttcc acccctcctg caccgggcac
    14761 gaccccgggg caaaccatcc cgattcgccc gaccgcatcc tctgcatcga gcaggcattg
    14821 cgccgcgccg gtatttggca gcacctccaa accgtagagg cggaagaaat cagcgatacg
    14881 cgccttgcac ttgtccgctc gagcaaatat ctgaaccgtt tggaatcttg cctacccgaa
    14941 gacggcaaga tttgccgttt ggacgacgac accgttatca gcaaaaactc cctgtccgcc
    15001 gcccgttttt ccgccggttc ggcagttcag gcagtcgata tggtcatgaa acgcaaagcg
    15061 tggcacgcct tttgcgccgc ccgcccgccg gagcatcacg cgaaaagcgg caaagccggc
    15121 ggattctgcc tgctgaacaa cgttgccgcc ggcgtcatgc atgccattgc cgaataccgc
    15181 ctgaaacgca ttgccgtcat cgatttcgat gtccactacg gcgacggtac ggcagaaata
    15241 ttcaaagacg atccgcgcat cctgtttttc aacctgtttg aaaccgacct tttccccttc
    15301 cccgaaaaca acggtatgcc cgacggcggc aatatggtgc acctgccctt gccgtcggga
    15361 acgggcaacc gcacattccg cgaagccgtc cgcagacagt ggctgccccg gcttgccgca
    15421 ttcaaacccg aactggtgct gctgtcggca ggattcgacg cacaccgtct ggacgaatcg
    15481 ggcaggctca acctgcacga ggcggatttt gcctggctga cacacaaaat cattcagacg
    15541 gcatccagct gccccggcaa aatcgtatcc gtactcgaag gcggctacac ccttgaacct
    15601 ctggcacaat ctgctgccga gcatatccgc gtactggcgg ggctgggcaa atccgatgcc
    15661 gcaaccgcct atcagaaaac actgaaccca acaaaaaaac ggtttgccaa accgaaaacc
    15721 ggacaggtgc gccaacctac ccaatccgac cgttacgata taaatgccgt ctgaagccga
    15781 ttcggttttc agacggcatc attatttgac ctgacgcaaa cagaaagcct tccgcgtgct
    15841 taaacacatc tcttgagacc tttgcaaaaa cccc
//
LOCUS       DAXGCP010000054        15821 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.054, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000054 DAXGCP010000000
VERSION     DAXGCP010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15821)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15821)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15821
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.054"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            32..244
                     /locus_tag="ACFJCW_001404"
     CDS             32..244
                     /locus_tag="ACFJCW_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HFC4151529.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            429..953
                     /locus_tag="ACFJCW_001405"
     CDS             429..953
                     /locus_tag="ACFJCW_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HFC4151530.1"
                     /translation="MTDRQIDNLIKPATIADTDPASNRVRAQHGGITTDWLPYIVPFA
                     GGVSVWRIPSVGEACTILSPAGEPENGVVLCCQASDRYPAPSADPAETVVRFPDGTHI
                     RYNHNSGAMELKAVTSLTIDTPQTTITGHLTVNQTTTAQGLLTYQNGMNGQGGSLSEH
                     THPDDSGGTTEKPQ"
     gene            950..1276
                     /locus_tag="ACFJCW_001406"
     CDS             950..1276
                     /locus_tag="ACFJCW_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPW/gp25 family protein"
                     /protein_id="HFC4151531.1"
                     /translation="MTDAENGRGQDTLAHIAQSIRNILFTRIGTRLMREEYGSFIPDL
                     IDMPAGHAAIALIHQAAVTALARWKPRITVRRIQADTADLAAGKIKLTLDVTLADGGE
                     RTYRIK"
     gene            1537..2007
                     /locus_tag="ACFJCW_001407"
                     /pseudo
     CDS             1537..2007
                     /locus_tag="ACFJCW_001407"
                     /inference="COORDINATES: protein motif:HMM:NF016736.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
     gene            2183..2746
                     /locus_tag="ACFJCW_001408"
     CDS             2183..2746
                     /locus_tag="ACFJCW_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HFC4151532.1"
                     /translation="MNSTVPANNSPLQHALAKLTERETAAVSRQLDPARCDPGFLPFH
                     AFARSIGTEEGWDFAETDEARRNLIAGFAEIHARKGTPYAIRALFPILRLGEIQIIER
                     DGEFKWDGSVLFDGSRTFGRREGDWAEYRIVLTRPVSIRQTARIRAMLAEIAPLRCEL
                     TALDYRNHPHRWNGKIRFNGEYGFGTT"
     gene            2786..4973
                     /locus_tag="ACFJCW_001409"
                     /pseudo
     CDS             2786..4973
                     /locus_tag="ACFJCW_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238084.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
     gene            complement(5420..5857)
                     /locus_tag="ACFJCW_001410"
     CDS             complement(5420..5857)
                     /locus_tag="ACFJCW_001410"
                     /inference="COORDINATES: protein motif:HMM:NF027249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HFC4151533.1"
                     /translation="MPFVAFGLCRYRISEKGSNDLLSRRAVPKPRSKQLGRDYSRSAG
                     LHPVGDTVADALADAKAAAMFHLEGLLQENLPIPEAQSIEVNRDNPDYADAVLWTMVE
                     ADDAALTGQVRFNVSWPQHILNRVDACTAARHETRAVFWRKPP"
     gene            complement(5907..6047)
                     /locus_tag="ACFJCW_001411"
     CDS             complement(5907..6047)
                     /locus_tag="ACFJCW_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151534.1"
                     /translation="MPQYRNWQNGLGAKCADGDEYGVAQSDCRTREINAKTKEIQGYL
                     ID"
     gene            complement(6092..6544)
                     /locus_tag="ACFJCW_001412"
     CDS             complement(6092..6544)
                     /locus_tag="ACFJCW_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1311 domain-containing protein"
                     /protein_id="HFC4151535.1"
                     /translation="MALIKEPLDKAKQRNEKLEAAEATAQEAREAEEAAAQEALGREQ
                     EAARVSEWEERYKLSRSEFEQFWKGLPQTVQNKLQASQKTWKSGMDKICANNAKAEGE
                     TPNGIKVSELACKTAETEARLEELHNRKKALIDEMVREEDKKELPKRL"
     gene            complement(7322..8968)
                     /gene="pgi"
                     /locus_tag="ACFJCW_001413"
     CDS             complement(7322..8968)
                     /gene="pgi"
                     /locus_tag="ACFJCW_001413"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HFC4151536.1"
                     /translation="MKHLHDLPAWSKLCNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIMVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     TMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNRKAVAEFGIDIANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMCGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK"
     gene            complement(9194..10042)
                     /gene="hexR"
                     /locus_tag="ACFJCW_001414"
     CDS             complement(9194..10042)
                     /gene="hexR"
                     /locus_tag="ACFJCW_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HFC4151537.1"
                     /translation="MLSKISESLADLSGAERKVAECALAEPKWFVHAAVAEIADRASV
                     SQPTVIRFCRSLGYKGLPEFKLSLSASIGHEGMPYVHEELNADDDMANVVEKVLGNAA
                     AALLGERRFLKESELENGIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            complement(10091..11077)
                     /locus_tag="ACFJCW_001415"
     CDS             complement(10091..11077)
                     /locus_tag="ACFJCW_001415"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HFC4151538.1"
                     /translation="MSSTPNKHADYPRLVADIGGTNARFALETAPCVIEKVAVLPCKE
                     YDTVTDAVRAYLNQSGATGVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQALGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSPAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYRHVSAERFLSGAGLSLIYETLAAKQKAEP
                     AKLMPSEITEKALNCESPLCRQALDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRM
                     LDYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGIAGAAAALGNHLKNV"
     gene            complement(11058..11753)
                     /gene="pgl"
                     /locus_tag="ACFJCW_001416"
     CDS             complement(11058..11753)
                     /gene="pgl"
                     /locus_tag="ACFJCW_001416"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HFC4151539.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTNHADSNTGLVREYLLKNKAAAAVWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGENREYPISLVL
                     NHQGVNCHVFYAE"
     gene            complement(11905..13350)
                     /gene="zwf"
                     /locus_tag="ACFJCW_001417"
     CDS             complement(11905..13350)
                     /gene="zwf"
                     /locus_tag="ACFJCW_001417"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HFC4151540.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSGEAWASFVERLAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQACENLAAIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTIE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFRPLQNHIFDNSQTAPNRLVIELQPNESVRLYTQVKTPGAGNKVEV
                     TPLGVDLGKAVEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGNKWHEEQ"
     gene            13382..13513
                     /locus_tag="ACFJCW_001418"
     CDS             13382..13513
                     /locus_tag="ACFJCW_001418"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151541.1"
                     /translation="MPSETCFFPSRSIAISETKAGGIMSSNTTHRYTFCLFPFLQFI"
     gene            13668..13786
                     /locus_tag="ACFJCW_001419"
                     /pseudo
     CDS             13668..13786
                     /locus_tag="ACFJCW_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            13870..15705
                     /gene="edd"
                     /locus_tag="ACFJCW_001420"
     CDS             13870..15705
                     /gene="edd"
                     /locus_tag="ACFJCW_001420"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HFC4151542.1"
                     /translation="MNHTPIHPKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRDELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLDAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVVKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFICVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVTGELNVLINEAE
                     WNVREVERIDLGANQQGCGRELFAGFRSMTSSAETGAMSFGGEFA"
BASE COUNT         3705 a         4823 c         4049 g         3244 t
ORIGIN      
        1 aaatatgcga aacaaaataa accgcaacga catggaactc ggctacacgc cttacaacct
       61 tcgcaccctg cgcaaccgct gcaaactgac acaggccgag ttggcgcaaa tcgtcggggt
      121 gaagcactac atacaggtag gccgctggga agccgaaccc gataccgaaa cgcggcgggc
      181 cgatatgccg ctggaaaaat ggcggcagtt cctcgattgg atagaaaaaa caaacgccgt
      241 ctgaaacctt cagacggcat tttttaccca cccccaaacc taaaaaccac aaccaagccc
      301 tacaccgctt gcccccacct cgccgccgcc ccaaaataac ctcactctgt tggaagcctg
      361 ccggaaacgg caaaagccgc cccgttccgc cattacgggg cggtttccca catcaagacg
      421 agacagaaat gaccgaccgc caaatagaca acctcatcaa acccgccacc atcgccgaca
      481 ccgaccccgc gtccaaccgc gtccgcgcac aacacggcgg cattaccacc gactggctgc
      541 cctatatcgt cccctttgca ggcggcgtgt cagtatggcg catcccaagt gtcggcgaag
      601 cctgcaccat cttatcccct gccggcgaac ccgagaacgg cgtagtttta tgctgccaag
      661 cctccgaccg ataccccgcc ccgtccgccg accccgccga aaccgtcgtc cgatttcccg
      721 acggcacgca catccgctac aaccacaaca gcggcgcgat ggaattaaaa gccgttacaa
      781 gcctgaccat cgacaccccc caaaccacca taaccggaca cctgaccgtc aaccaaacca
      841 ccaccgccca agggctgctg acctaccaaa acggcatgaa cggccaaggc ggcagcctgt
      901 ccgagcacac ccaccccgac gactccggcg gtacaacgga aaaaccccaa tgaccgacgc
      961 agaaaacgga cgcgggcaag acaccctcgc ccacatcgcc caatccatcc gcaacatcct
     1021 gttcacaaga ataggaacgc ggctgatgcg cgaagaatac ggcagtttta ttcccgactt
     1081 gatcgatatg cccgccggtc acgccgccat cgccctcatc caccaagccg ccgttaccgc
     1141 cctcgcaaga tggaaacccc gcataaccgt ccgccgcata caggcagaca ccgccgacct
     1201 cgccgccggc aaaatcaaat taaccctaga cgtaaccctt gccgacggcg gcgaacgaac
     1261 ctaccgcatc aaataataaa aacaacagga taaacaatgg gaaacagccg attaagccaa
     1321 ctccccgcgc ccgccgccat cgaagaaacc gactttgagg gcatcttcgc gcgcaaaaaa
     1381 gccgccctca ccgccctatg tcccgaaagc atccgcgaaa ccgtcgccca aaccctcgaa
     1441 ttagaatcag aacccctaac catcgacctg caacagcaag cctatcaaga gctgctcgtc
     1501 cgcaaccgca tcaacgaagc cgtcaaagcc aacctcttgg catacgcaca aggcagcgac
     1561 ctcgaccaca tcgccgccca atacggactt tcacgcaaaa ccatccgcgc cgccgacccc
     1621 gacgcgaacc cgccggttgc cgccgaatac gaaaccgacg acgcattccg cgcccgcgtc
     1681 caagcccatc ccgaaaaata cgccgccggg ccgcgcaccg catacgaagc ccacgccatc
     1741 gacgcacacc cccaaatcac acacgcccgc gccgtgcgcc gcgccgtcgg cacggtggag
     1801 gtttacatca aaacccaaag cggcacgccc gacgaaacca ttttgaccgc cgcgcgcgaa
     1861 tacctgcccg ccgaaacacg ccgccccctt tgcgacaacg tgcaagtaac cgccgcccaa
     1921 cccaaagacg cggcagtaga gtattccgcc gaataccacc ccgccgccaa tattcaagcc
     1981 gaacggcaga ccgcctgcga agccttggat aacctatggc ggcaaaacgc ccacatcggc
     2041 gcatccgtcg ccctgtctaa aatcatcggc gcgttagaca cccccggcgt gaaaaaaaat
     2101 cacactgcac agccccgctg ccgacatcga atgcggcaac ggcgaataca tccgaatcac
     2161 gtccacgctc gagcgcgaat aaatgaacag caccgtcccc gcgaacaaca gccccctgca
     2221 acacgcactg gcaaagctga cagaacgcga aactgccgcc gtctcccgcc aactcgaccc
     2281 cgcccgatgc gaccccggat ttttaccctt tcacgccttc gcaagaagca tcggcacgga
     2341 agagggctgg gactttgccg aaaccgacga agcccgccgc aacctcatcg caggctttgc
     2401 cgaaatccac gcccgaaaag gcacgccgta cgccatccgc gccctcttcc ccatcttgcg
     2461 gctgggcgaa atccaaatta tcgaacgcga cggcgagttc aagtgggacg gctcggtctt
     2521 gttcgacggc agccgcacat tcggcaggcg cgagggtgac tgggcggaat accgcattgt
     2581 cttaacgcgc cccgtcagca tccgccaaac cgcccgcatc cgcgccatgt tggcggaaat
     2641 cgcccccttg cggtgcgaac ttaccgcgct cgactaccgc aaccatcccc accgctggaa
     2701 cggcaaaatc cgctttaacg gcgaatacgg tttcggcacg acataacgcg cccccgaaaa
     2761 tcaacaaaca aaaggaagcc ccaaaatggc aaacgcaacc gaacaaaacc aattcgacca
     2821 agccgtccgc ctcatcgaac ccggcgacag cgtcgtcgtc ggcccaggcg cgcccgtcaa
     2881 ccaaccactg caagccctcg ccaaccgcac ccttttgctc aaaaaccaaa ccgaagccct
     2941 tcagacggca tccgacacca aagccgcacc atcgcactgg gcgcgcccgg gcaaatcacc
     3001 gcaacaagcc aaaacaccgt cccaaaaaac ggccacaccc acgccatcga caccgcacgc
     3061 accgaccgcg ccggcatcgt ccgattagac aatgccatta gcgaagccga agacaccgcc
     3121 gccaccccca aagccgtcaa aaccgcgatc gaccaagccc gcgccgccgc cgcgaccgcc
     3181 gacctcaaag tctccctctc cgacaaccaa accgttaccg gccaaaaaac ctttaccgcc
     3241 gaaacacaat tccaaagcgg catccggctg tccgccaacc cgacgcactg aaacggcggc
     3301 tacaaagcct atatcggcgc ggataacgaa aacgcccaca tcgtcttcgg cgacgacacc
     3361 ctgcgcctgc acggcgcaaa taaccgcatt tcctacaaca accacgacat cttccacaaa
     3421 gccaacaaac cgcgtttcaa cgaagacatc gaaggcaaac cgaacacgct gtccggctac
     3481 ggcatcggca acttcaaagt cgaaacattc cggggcgatt tgaacagcct caaaaccgac
     3541 ggcgtctatt ccctgccgac ggcggtcggc agctcgaacc tgcccgttga aaacaccgcc
     3601 tgccatatcc aagtcatcgc cggcacgcaa cccggctggt gcaggcagtt gggctatccc
     3661 gcctacacgt ccgacgtgta cgaacgctac cagcccagca gcgcaaacga cgactggagc
     3721 gcgtggaaaa aactcaattc ggaaggcatc cccgccggcg cgatcgtgtc ctttcccaaa
     3781 gccgtccgaa accccgcagg ctatctcaaa gccgacggca cgatctttgc acaaaacacc
     3841 ttctcgacct ttaccgcgcc ctgggcaaca caaacaaact gcccgacctg acccgtaccg
     3901 acatcggcat caccgcgtgg tttccgtccg accaaatcca gacgggctgg ctggcgtttg
     3961 acgacatccg agagcgcgta accgaatcgg cttatcccga actttaccgc ctgctgaccg
     4021 aaaaatacgg acgcatccaa aacgtcccgc aggcggaaga ccgctttatc cgcaacgcgg
     4081 gcaacggctt ggcggtcgga acgaagcagg aagacgaaat caaacggcac gtccacaaag
     4141 tattttcaca ctgggcaaac cacccagacg ccgccgccgt cggttacgaa gaccgcaatg
     4201 aaaggcaaag aagcgcgctc gtatcgactt ggacgggcgg cgacttaaac gacaacggct
     4261 ttttaacccc gcgattggac agcaaaatgg caacgggcgg cgcagaaaac cgccccaaag
     4321 ccctggtttt aaaactgtgc atcaaagccg ccgacacctt gggcgaagcc gtgttccgga
     4381 taaagtccca cggcgaaacc gccaacgccg gcgcactgga cgcgtcaagg ctggcgcaag
     4441 gtttgcagga aaaagccgac cgcgaccaca cccacaccac cgcccaaatc caagggctgg
     4501 acgaaaaaat cagcgccgcc gttgccgcgc aattcacacg ccaaaccatc ggcggcgtgg
     4561 atattgtcag attccccgac ggcacaatga tacagaccgg cagttacagg tttgcaagag
     4621 gcggcagccc cataggaaac gaagttgtct tccccatcgc ctttgccgac ggcaacgtca
     4681 aatgcttcgt atccgaacgc cattcgggac gcgtcaacgg cgaaaggcaa cacaactggc
     4741 tgtttatccg cgcaaaaaac cacgccgccg ccattattac caactggtac gaaagcagtt
     4801 gcgactggat ggccatcggc aaatccgcct cgggaaacgc cgccagcccc accccgatag
     4861 tccccgaaat acctgaaatc gatgaagaac cgcaaagaga gagtggaaga tcatcaaccg
     4921 gactccgaaa cccccgccgc caccgaggcc tcgacttccc cgtggggtcg taagactagc
     4981 gggcggcagg gcaggctgta gagacgggct gtagagacgg gctgtagaga cgggcttcag
     5041 cccaccgatc caagcaatcc gaccgaaacc ggccgcgccg ccaatcctgc gaaacctatg
     5101 ccccgccaat cctgccactc ttcgccattc ccgcgaaagc gggaatccgg aacccaaacg
     5161 cggcaggaat ctatcggaaa gaataacccg accgccgtca ttcccgcgca ggctggaatc
     5221 cagacccaca acgttaaggc ggtttatcag aaaaaaccga aaccgaacgc cctagatttc
     5281 cgcctgcgcg ggaatgacga agagttgggg agtgacgaaa ggcgggaaca accgcgcaaa
     5341 aagccgccga ctccttcaga cggcatcggc aataaaaaag cccgaaaaaa tcgggctgaa
     5401 agttaaggct gcatcgcctt taaggcggct ttcgccaaaa aaccgctcgg gtttcatgac
     5461 gggcggcagt gcaggcatcg acacggttga ggatatgttg cggccaactg acgttaaacc
     5521 gcacctgtcc ggttaatgcg gcatcgtccg cttcaaccat cgtccacaac accgcatcgg
     5581 cataatcggg attgtcccga ttaacctcta tgctttgcgc ctcgggaatc ggcaggtttt
     5641 cctgcaaaag cccttcgaga tggaacattg cggcggcttt ggcatcggca agcgcgtcgg
     5701 caaccgtatc gccgacagga tgcagcccgg cagatcggga ataatcacgc cccagttgct
     5761 ttgatcgggg ttttggaaca gcacggcggg atagtaaatc attacttcct ttctcggata
     5821 tgcggtatcg gcaaagtcca aacgcaacga aggggattta aaaacgacaa aaacgcaaaa
     5881 gccgccgaca ttcccgcatc caagtttcag tcaatcagat aaccttggat ttctttggtt
     5941 ttcgcattga tttctctggt acggcagtca gattgtgcca ccccgtattc gtcgccgtcg
     6001 gcgcatttgg cacccaaacc gttttgccag ttgcggtact ggggcataac ggtttcggca
     6061 atatcggcgg gcagtgcctg aaccgcgctg ttcagagccg ctttggcagt tctttcttgt
     6121 cctcttccct gaccatttcg tcgataaggg cttttttacg gttgtgcagc tcttccaagc
     6181 gtgcttcggt ttctgccgtt ttacacgcca actcactgac ttttatgccg tttggcgttt
     6241 caccttcggc tttcgcattg ttggcacaga tcttgtccat accgcttttc catgttttct
     6301 gcgaggcttg cagcttattc tgtacagttt gaggcaatcc tttccaaaac tgctcgaact
     6361 cgctgcgcga cagcttgtag cgttcttccc attcggatac gcgggcggct tcctgctccc
     6421 gacccaatgc ctcctgcgcc gccgcttctt ctgcctccct cgcttcctgc gcggtggctt
     6481 ctgccgcttc aagtttttcg ttcctttgtt tcgctttgtc caacggctct ttaatcagtg
     6541 ccatagacac cagctcgctg agcggatgga tgatatcgtg tgcctgactg agttcggcaa
     6601 agattttgct tttgtcgtct gtcggctgga cgctgtaaga aatagttttg acataatacg
     6661 cgccttcttt gcggtagtag ggttcaaaaa agtcgggcgt tttcttatgg ctgttgccta
     6721 tagattggtt ggcggcgacg gcataatcga caacatcgtc gggcacgtcc agttttaacg
     6781 cggcttcaca tttgagtttg ctggacgtgt cggttttctc ggtagttcgg acttcatcga
     6841 cggttatgcc caaacgttcg accattctgc ggatatgcga tatgccgata tcggcaaatg
     6901 cttggtcttt gaatgcgtcg tcgtcaaaag ttttgacggt ttcaccttcg acattgtcgc
     6961 ggaccagttt gaccaaaatc tctttagtct cttcgcttcc gcaggaaatt tcctttccgg
     7021 aaaacgggtt gcctattccc aaacggtcgc agcccgacaa aatcagcata cttgccaatg
     7081 ccagtgcggg taaatttttt ttcattagat ttcctttgcc gtccaaacac ggactgtctg
     7141 ttgcgtattt ccacacacgc tacggcactt gaagtacatg gctgcggaac atatatgttt
     7201 aaatttatgc aaaccgccat atcgggattg cacacgccct gcaaatttac cgacggtttt
     7261 cctgttcgat aaaaatgccg tctgaaacgg tcggcgttca gacggcattt ttccgcaggt
     7321 tttatttgcg gttggtctgc aggtagaggt taatcaggcg ttcggtcgag ctgtcgtgtt
     7381 tttgaggttc ggtttcgcct gtcagttcgc ccaaaatggt tttagccagt tgtttgccga
     7441 gttccacgcc ccactggtcg aagctgttga tgccccaaat gatgccttgg acgaaggttt
     7501 tgtgttcgta catggcaatc aggctgccca tattgcgggg gttgacctta tccatcagga
     7561 tgaggttggt cgggcggttg ccggagaagg ttttgtgcgg aaccagctct tcgatgcgcg
     7621 cctcatccat accctgcgct ttgagttcgg cgcggacttc gtcgggggtt ttgccgcaca
     7681 taaaggcttc tgcttgtgca aagacgttgg caagcaggat ttcgtggtgt ccgggcaggt
     7741 tgctgcgttt ttcaagcgag gcaatcaggt cgatgggggt gatgtgcgtg ccttgatgca
     7801 gcagttggaa gaaggcgtgc tgaccgttaa tgcccgtttc tccccagata atcggcgagg
     7861 tttcgtgtcc gactgctttg ccgtccaacg taacctgttt gccgttgctt tccatatcga
     7921 gctgctggat gaatttgggc aggcggtgca aatgttggtc gtaaggcgcg atgacgtggc
     7981 tgccgccacc gtagtagttg atataccaga tgccgatgag ggcgaggatg acgggcaggt
     8041 tgcgctcgag cggggtgttg atgaagtgtt ggtccatcag gtgcgcgccg ttgagcattt
     8101 cgatgaagtt ttcttcgccg agatacagca taatcggcaa tccgatggcg gaccacaggc
     8161 tgtaccgacc gccgacccaa tcccaaaatt caaacatatt ggcgatgtcg atgccgaatt
     8221 cggcgacggc ttttcgattg gtggaaacgg cggcgaagtg tttggcaacg gcttcttcgt
     8281 cacccgcatg attcaaaaac cattcgcgcg cggttagcgc gttggtcagc gtttcctgcg
     8341 tggtaaatgt tttggaggcg atgatgaaca gcgtggtttc cgggtggact ttggacaata
     8401 cgtcgcgcag ttgcgagccg tccacgttgg agacgaagtg catattgagg cgcggatgac
     8461 cgaaaggttt gagcgcggta cacatcgtca gcgggcccaa atccgatccg ccgatgccga
     8521 tgttgacaac gtcggtaatg acttggttgg tatagcccag ccagcttccg ctgcggactt
     8581 cgtgtgcaaa ttcgcccata cgttgcaaaa cgcggttgac tttgggcatc acatcttcac
     8641 cgtcaaccat aatcggcgaa ttggtgcggt tgcgaagggc gacatgcagg acggcgcggt
     8701 tttcggtggt attgattttt tcgccgtgga acatctgccg catccgctcc ggcacgcctg
     8761 cttcacgcgc caactcgaac agtagggaca tggtttcgtc gttgatgcgg tttttggagt
     8821 agtccagcgt cagtccgccg acttgcagcc agtagcgttc cgcccgctgc gggtcttgct
     8881 cgaacatttc gcgcatatgc aatgttttgc tgtcgtcaaa gtggttgcac aattttgacc
     8941 aggccggtaa gtcgtgaagg tgtttcatct gtatgctccc gattgaggtt ttccgtgacg
     9001 gggggcgttt ccgcacatcg atgcgcacat aaggcgcaac cctgcgtacc gccccgattt
     9061 ggaaggggtt gcggcaaacc cgaaccctgc cgccttaaag ggcggggttt ccgccattaa
     9121 ggaaattctg ataaaaggct tgccggagcc tgtccggccg ttcagacggc attggcggga
     9181 tgccgtctga acatcagtct ttgtcgtaat cgatgtgctt gttgtgtatg ctttttttgc
     9241 ttttctgcaa ttgcaggctg gcagcatcgc ccaagcgcag ggcaagtccg atggcgagaa
     9301 tatcgatgac ggcaagctgc aagaggcggg aaaccatggg cgtgtagagt tcggcgtttt
     9361 cctgtgtggc aacgctcaac acgcagtcgg caagttgcgc cagaggcgaa tcgttgcggg
     9421 tcagtgcgat gacggacgcg ccgttttctt tggcgatgct gaccgcatcc aaaagttcga
     9481 tagacgaacc cgtgttggaa atggcaacca aaacatcctg atcgctcaaa acggatgccg
     9541 ccatcagttg cgtgtgcgta tcgacatagg cgacggtgga catgccgaaa cggaaaaatt
     9601 tgtgctgcgc gtcctgtgcc acaatgccgg aattgcccac gccgtaaaat tcgacgcggc
     9661 gggcgtgcat cagggtggcg atgccgtttt cgagttcgga ttcttttaag aacctcctct
     9721 cccccaacaa ggctgcggcg gcgttgccca acactttttc aaccacattc gccatatcgt
     9781 cgtcggcatt gagttcttcg tggacataag gcataccttc gtgcccgatg ctggcggaca
     9841 gggagagctt gaattccggc agccccttat aaccgaggct gcggcagaac cggatgacgg
     9901 tcggctggct gaccgaggcg cggtcggcga tttcggcgac ggcggcgtgg acaaaccact
     9961 tgggttctgc caaggcgcat tcggcaactt tgcgttccgc accggacagg tcggccagtg
    10021 attcgctgat tttgcttaac ataatgatat gcccttcgat aatgcggccc tgctgcaagg
    10081 gctgccgtgg ttagacgttt ttcaggtggt tgccgagcgc cgccgccgcg ccggcaatac
    10141 ccggaaattc gctcaagacg acataaacgg gaatcgcggc aaggtaggct tcaaaacgcc
    10201 ctttgttttc aaagcggctg cggaaggggg aggttttgaa gtaatccaac attcgcggga
    10261 taatgccgcc gcacaaatac acgcccccgc gcgcgcccaa agtcagggcg aggttggaag
    10321 cgaccgtgcc cagcatcgcg caaaaaatgt ccaatgcctg ccggcacagg ggcgattcgc
    10381 aatttaatgc cttttcggtg atttcagacg gcatcagttt tgccggttcg gctttctgct
    10441 tggccgccag cgtttcataa atcaggctca aacctgcgcc gctgaggaaa cgttcggcgg
    10501 aaacgtggcg gtatttgttt ttggcgtact gccaaatcaa cacttccata tcgtcaaacg
    10561 gcgggaaact ggtatgcccg ccctcgcccg ccaacgccac ccagcctgcg gggctgtgca
    10621 ccaatccgct cacgcccaag ccggtaccgg ggccgataac ggccttgggg gcgaattcga
    10681 caggcttttg cccgcctacc tgcatcaggt ctttgcttga agtctgcgtt accgccaatg
    10741 cctgcgcggt aaagtcgttc aaaaggatga gggtgtccag ccccaaagcc tgacgggtgg
    10801 tttcgatgga aaacgcccaa tggtggttgg tcatctgcac ccagtcgccc aaaatcgggt
    10861 tggcgatggc aaatgccgcg tgccgtacgc ccgttgcacc actttggttc agataggcac
    10921 gcaccgcgtc ggtaaccgtg tcgtattcct tacacggcag gacggcgact ttctcaatca
    10981 cgcacggcgc ggtttccaat gcgaaacggg cgtttgtgcc gccgatgtcg gcaaccagcc
    11041 tcgggtaatc ggcgtgttta ttcggcgtag aagacatggc agttcactcc ttgatggttc
    11101 aaaacgaggc tgatcggata ttcgcggttt tcgccttgtg cggcttggtc gaacacggct
    11161 tttttctctt cgccctgtat cgccaaaaat acatgcccag tatgggcaat cgcatccaaa
    11221 gtcatgctga tgcgctcgtg cggcgcggta acgggcgtgg tatgcaccag cgcgacacct
    11281 gccgaaccgt cgattgccgt ctgaaactgc ggagcttttg ggaaaatcga agccgtatgc
    11341 ccgtcgtttc ccatacccaa aatcaaaaca tcgggctgct tgtaatgttt cagcgcataa
    11401 tcgacaacag catcgggatg taattcggtt tcagtttttc cgtcttccac cataggaatc
    11461 cacactgccg cagcggcttt gttctttaac aggtattcgc gcaccagacc ggtattgctg
    11521 tcggcgtggt tggtcggcac gatgcgttca tctgccaagg taattccgac gtttttccaa
    11581 tccaaatctt tttgcgacag ggcgttgaaa aatgcaatcg gcgaacgtcc gccggaaact
    11641 gccaacaccg caccgccctt ctcgtccagt gcgccctgca aagcatccgc cactgcgtca
    11701 gccaaagact gcgccgcttc tgccgcattt tcgtattcgt gccaaacaaa catatttgtg
    11761 tccttttgtg atttcagacg gcatatcccg ttacagggcg gctgccgggc aatggcttag
    11821 ccgcttccgc ctcgaagcgg gactgctttt tctgccccgc cctccttcag acggcattgc
    11881 gaacccgatg ccgtctgaag cgcattactg ttcttcgtgc cacttgttgc cgtcgcgcgc
    11941 caacagttcg cgggcggctt caggacccca agagtgtgcg ccgtaaccgt gcggcggcgt
    12001 ggtgttattt gcccagtttt ccaaaatcgg catcacatat tcccacgcgg cttcgagttc
    12061 gtcgcggcgg ttgaacaaag cgagtttgcc gttaatcaca tccaacagca ggcgttcgta
    12121 agcctcggcg cggcggcctt caacggcctt gcccaaatcc acgcccaaag gcgttacttc
    12181 cactttgttg cccgcacccg gggttttcac ctgcgtgtaa aggcggacgg attcattcgg
    12241 ttgaagctcg ataaccaaac ggttcggcgc ggtttggctg ttgtcgaaaa tatggttttg
    12301 cagcgggcgg aagttcaaaa cgatttccgc cactttgccc gccatgcgtt tgccggtacg
    12361 caggtagaag ggaacgccct tccagcgttc gttttcgatt tcggctttaa tggcgacgta
    12421 ggtttcggta aagctgtctt gcggaacgtt gatttcttca agatagccgt tcatgccttt
    12481 ggcagcggta tattgtccgc gcacgacatt ttcattgaca gattcgatgg tcagcggctt
    12541 caatgacttg atgactttga ctttttcatc gcgcaccgcg tcggcatcca agctggcggg
    12601 ggcttccatc gcagtcatgc acagcatctg catcaaatgg ttttgcacca tatcgcgcaa
    12661 cgcgccggta atgtcgtaaa actcgccgcg ctcttccaca ccgagctgtt cggcgatggt
    12721 cagctgcacg ctttcgatgt atttattgtt ccacagcggc tcgaacatta cattggcaaa
    12781 acgcagcgca agcaggtttt gcaggctttc tttgccaagg tagtggtcga tgcggtaaat
    12841 ttgcccttct ttgaaataac gcgccacatc ggtattgatt tgttgggaag aagccaaatc
    12901 cgtacccagc ggtttttcca aaaccacgcg cacattgtcg gcattcaaac cgatcgcagc
    12961 aaggttttcg caggcttgcg cgaagaattt cggcgcggtg gacagataga tgacgacgtt
    13021 gtcggtttct ttgcgtgctt tgaccaaatc gcccaaagcg gcaaaatcgt ccggctgcgt
    13081 aacatcgact ttgagatatg cgagacgttc aacaaacgaa gcccacgcct caccggaaaa
    13141 attttctttc acatggattt tggaactggt ttccaccttc gccagaaaac cttcggtatc
    13201 caactcgctg cggctgaccc ccaaaatacg cccttcggga tgaagcagac cggcaacatg
    13261 cgcctgatac aggcagggca aaagtttgcg cattgccaaa tcgccggtcg caccgaacaa
    13321 caccaaatca aaatttgtct gtgtactcat cgcattatct cgtcaggaaa ggattttttc
    13381 gatgccgtct gaaacctgtt tttttccatc acgcagcatc gcaatatcgg aaacaaaggc
    13441 aggcggcata atgagtagta atactacaca ccgctacact ttttgtctat tcccattttt
    13501 acaatttatt tgacctagtc caaaaatcag gcaggtttcc cctattccgt tacaacaatc
    13561 agaaaattct gcgatttaaa tcaaatttct tttcaatgtc tgattttttg taacaaaatt
    13621 acaaattttg tactataata gcacccgctt cccactttca gacggcgtac cttttaaaat
    13681 atagtgaatt aaatttaaat caggacaagg cggcgagccg cagacagtac aaatagtacg
    13741 gcaaggcgag gcaacgccgg accggtttaa atttaatcca ctatactcac cgtctaacat
    13801 acccgataca aaaatcagaa acgcacaaac aaatccccaa taccaccccg ttccgccagg
    13861 agaccgaaca tgaaccacac tcctatccac cccaaactcg ccgaaatcac cgggcgcatt
    13921 atcgaacgca gccgtccgac gcgtgaaaaa tatctggcga aaatccgcag tgccaaacag
    13981 atgggacgct tagagcgcaa ccagctcggc tgcagcaatt tggcgcacgg ctatgccgcc
    14041 atgcccaaaa gcatcaaaat cgaaatgctt caggaaaccg tccccaactt aggcatcatc
    14101 actgcctaca acgacatggt ttccgcacac cagccgttta aagacttccc tgaccaaatc
    14161 aaagacgaag cacaaaaaaa cggcgcgacc gcacaagtcg ccggcggcac gcctgccatg
    14221 tgcgacggca tcacgcaagg ctacgccggc atggaattgt cactgttttc ccgcgacgtg
    14281 attgcgatga gtaccgccgt cgggctgtcg caccaaatgt ttgacggcag cctgtttatg
    14341 ggcgtgtgcg acaaaatcgt tccgggtctg atgataggtg cgctttcgtt cggtcatatt
    14401 cccggtatct tcgttccggc aggcccgatg tccagcggca tcggcaataa agaaaaagcc
    14461 cgtacccgcc aacttttcgc cgaaggcaaa gtcggacgcg acgaactttt gaaaagcgaa
    14521 atgggttctt accacagccc gggcacctgc actttctacg gcacggcaaa ctccaaccaa
    14581 atgatgatgg aaatgatggg cgtacacctg cctgccgccg cctttgtcca cccctatacc
    14641 gacctgcgcg aagccctgac ccgctacgcc gccggacacc tcgcgcgcgg catcaaaaac
    14701 ggcacgatta aacctttggg cgaaatgttg accgaaaaat ccttcatcaa tgccctgatc
    14761 ggtttgatgg cgaccggcgg ctcgaccaac cacaccatgc acctcgtcgc tatggcgcgc
    14821 gccgcaggcg tgattttgaa ctgggacgac ttcgacgaaa tttcttccat catcccgctg
    14881 ctcatccgcg tgtatcccaa cggcaaagcc gacgtgaacc actttaccgc agcaggcggc
    14941 ctgcctttcg ttatccgcga attgctggac gcaggcttat tgcacgacga tgtcgatacc
    15001 gtcgtcggac acggtatgcg ccactacact aaagagcctt tcctcatcga cggcaaactc
    15061 gaatggcgcg aagcccccga gaccagcggc aacgacgaca tcctgcgtaa agccgacaat
    15121 ccgttctccc cggacggcgg tctgcgcctg atgaaaggca acatcggacg cggcgtggtt
    15181 aaagtgtcag ccgtacgcga aggctgccgc atcatcgaag cacccgccat cgtgttcaac
    15241 gaccagcgcg aagtgttggc ggcatttgaa cgcggcgagt tggaacgcga ttttatctgc
    15301 gtcgtccgct accaaggccc gcgtgccaac ggtatgcccg aattgcacaa actgaccccg
    15361 cctttgggca tcctgcaaga ccgcggcttc aaagtggcgc tgctgaccga cggccgtatg
    15421 tccggcgcgt caggcaaagt gcccgcgtcc atccacatga cgcccgaagc cctgatgggc
    15481 ggcaacatcg ccaaaatccg taccggcgac ctgattcgct tcgactccgt taccggcgaa
    15541 ctcaacgtcc tgattaacga ggccgaatgg aacgtccgag aagtcgagcg catcgatttg
    15601 ggcgcgaacc aacaaggctg cggccgcgaa ctcttcgccg gcttccgcag tatgaccagc
    15661 agtgcggaaa ccggtgcgat gagcttcggc ggagaatttg cctgatgcgc gtttcagacg
    15721 gccttttaaa acagaaggcc gtctgaaaaa ttattgaagc cgtttaaaat agatgcagac
    15781 gtagcgtgag ctttgcccgc gaacaaaacc caagcaacat c
//
LOCUS       DAXGCP010000055        15693 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.055, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000055 DAXGCP010000000
VERSION     DAXGCP010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15693
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.055"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(618..1760)
                     /locus_tag="ACFJCW_001421"
     CDS             complement(618..1760)
                     /locus_tag="ACFJCW_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HFC4151543.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQAGSAPAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTVAITAKGK
                     ELLGGKLPENGWDLLFKPEYTRKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LTPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
     gene            2061..2324
                     /gene="rpsT"
                     /locus_tag="ACFJCW_001422"
     CDS             2061..2324
                     /gene="rpsT"
                     /locus_tag="ACFJCW_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HFC4151544.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            2484..3632
                     /locus_tag="ACFJCW_001423"
     CDS             2484..3632
                     /locus_tag="ACFJCW_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HFC4151545.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPTASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPFWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAENLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDWDGI"
     gene            3774..4475
                     /locus_tag="ACFJCW_001424"
     CDS             3774..4475
                     /locus_tag="ACFJCW_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HFC4151546.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPQ
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPPEKAELPEQQ"
     gene            4533..6341
                     /gene="aspS"
                     /locus_tag="ACFJCW_001425"
     CDS             4533..6341
                     /gene="aspS"
                     /locus_tag="ACFJCW_001425"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HFC4151547.1"
                     /translation="MRTNYCGLISEQYLGQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSARNEYVLGIAGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVATGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALNVDLGGFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGAKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDAGNLSNGEDSGLQSPIVKFLSENALKEIIERTAAQ
                     NGDIIFFGADKAKVVNEAVGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQGKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTDAPNSVDDKQLRELSLRLRQKAVETKEA"
     gene            6499..6774
                     /locus_tag="ACFJCW_001426"
     CDS             6499..6774
                     /locus_tag="ACFJCW_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HFC4151548.1"
                     /translation="MLLAAVVSLNAATAFAGDSAERQIYGDPHFEQNRTKAVKMLEQR
                     GYQVYDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            6941..8833
                     /gene="speA"
                     /locus_tag="ACFJCW_001427"
     CDS             6941..8833
                     /gene="speA"
                     /locus_tag="ACFJCW_001427"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HFC4151549.1"
                     /translation="MPILTIREVCNINHWSIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPFLGFFMVGAYQEILGNMHNLFGDTATADVVVREDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            8932..9855
                     /gene="speB"
                     /locus_tag="ACFJCW_001428"
     CDS             8932..9855
                     /gene="speB"
                     /locus_tag="ACFJCW_001428"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HFC4151550.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSFGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLSAPKVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            10053..11519
                     /locus_tag="ACFJCW_001429"
     CDS             10053..11519
                     /locus_tag="ACFJCW_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HFC4151551.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFVGV
                     IAAIIGKVMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLSEMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFLAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFVMSVVNFLIFSVIGSIWWKVLGYW"
     gene            complement(11723..12799)
                     /locus_tag="ACFJCW_001430"
     CDS             complement(11723..12799)
                     /locus_tag="ACFJCW_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HFC4151552.1"
                     /translation="MICRKPIGHTPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWHIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGIRSHGCVRMKS
                     PDALEFAKTIATGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDTASLKKSIGQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEVSETRTPEVPDVHTPEAQAHLNTQSDGTPTAYTEPAADSSPQVESPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            12863..13000
                     /locus_tag="ACFJCW_001431"
     CDS             12863..13000
                     /locus_tag="ACFJCW_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA methyltransferase"
                     /protein_id="HFC4151553.1"
                     /translation="MATETNIAEISALDYEGRGVAKVGGKTIFIKGALLDCLMLGCFR
                     L"
     gene            13022..14164
                     /gene="bioF"
                     /locus_tag="ACFJCW_001432"
     CDS             13022..14164
                     /gene="bioF"
                     /locus_tag="ACFJCW_001432"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HFC4151554.1"
                     /translation="MKVFRQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSETCIVPYILGGNEATLAK
                     AEYLQGQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAACL"
     gene            14174..14821
                     /locus_tag="ACFJCW_001433"
     CDS             14174..14821
                     /locus_tag="ACFJCW_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HFC4151555.1"
                     /translation="MKTKFYNHQGEHLILYFAGWGMPPDAVNHLILPENHDLLICYDY
                     QDLNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPCA
                     VFKGTLENLTENTRSKFERRICGDKASFEDYQQFPARPFDEIHQELTALFAMIGQDRR
                     TDLIRWTNALFGSGDKIFIPANQHRYWTPRCTVQETDGGHYLFSRFTHWSALWNH"
     gene            14809..15591
                     /gene="bioC"
                     /locus_tag="ACFJCW_001434"
     CDS             14809..15591
                     /gene="bioC"
                     /locus_tag="ACFJCW_001434"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HFC4151556.1"
                     /translation="MESLTAINKPRIRQAFQKALSDYDRHALIQQKMTINLIAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVRSRLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKTNGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQAWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFGMPSGKVRLTYHPLFFIARHSAAGRQ"
BASE COUNT         3843 a         3777 c         4042 g         4031 t
ORIGIN      
        1 tctttttcct ggaatagcgc attgaaaaga gtatgataat ggaaacataa aagattccgg
       61 caaatgtccg tgcgccgttc ccctccgtca ttcccgctca ggcgggaatc caggtccgtc
      121 ggcataggaa cttatcggat aaaacggttt cttgagattt gacattctag attcccactt
      181 tcgtgggaat gacgggatgc ggatttccgt gcggacgcgt tcggattcac gactgcgcgg
      241 gaatgacggg atttcagttt gcggattgat ttgaagttgc aaaatcccaa cggatcggat
      301 tcccgcctgc gcgggaatga cggcggaagg ttttttgtct ttcctgatta tagtggatta
      361 acaaaaatca ggacaaggcg aggaagccgc agacagtaca aatagtacgg aaccgattca
      421 cttggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgggg caacgccgta
      481 ccggtttttg ttaatccgct ataaatgtcc gcaatctgaa atcccggccg tgggggcgac
      541 ggtataaata tttctatttc aatccaatat aaaatgccgt ccgaacatcg ttcggacggc
      601 atttttaatg cttcgaatca gttggtgccg actttgattt tctgccacag gctgaccgac
      661 agttttttcg catccgtgct catttgcggc atgacgaaac cgtctttcat atcctgctcg
      721 ttcgggaaga tggaacgggt gttcaccaac tcggcaggca ttttttcgcg cgccggtttg
      781 ctggcggggg cgaaggttac ggcgatgccg tttttcgccg cgatttcggg gtcgagcgtg
      841 tagttgatgt atttgtgggc gttggcgacg tttttcgcat cggcgggaat cagccaagac
      901 tcaatccaga agcccatacc tttcggtgtc agcacttcga tgccgacgtt gtttttcact
      961 tcttcggaac gcgctttcgc caagttcaaa tcgccgccgt tgcctgccgc caggcagatg
     1021 tcgccgcgcg ccagctcgtc gatgatggac gggctgaaac gtttgacgtc cggacggata
     1081 gacttcaaca cttccgccgc cgccttcaaa tcttcaggat tcgaaccttt ggggtctttg
     1141 cccaagtagt tcagcaaaat cgggaacatt tcgctcgggg tgtcccacaa ggcgatgccg
     1201 caggatttca gcttgcgggt gtattcgggt ttgaacagca aatcccagcc gttttcgggc
     1261 agcttgccgc ccaaaagctc tttgcccttc gccgtaatcg caaccgtgtt cacgccggag
     1321 aaatagggga cggcatactg gttgcccggg tcggcggttt ccagcatttt caagagttcg
     1381 ggatcgatgt ttttatagtt gggaatcagg tctttgttga ctttttgata cgcgcccgcc
     1441 tcgatttggc gcggcaggaa ggcgatgccc ggcacaacca aatcgtaacc ggatttgccg
     1501 gtcagcattt tggcttccag cgtttcgttg ttttcgtaca agtcgtaagt cagcttcaga
     1561 ttgttggctt ttttaaagtc ttcgaccgta ctctcgtcaa cataattcga ccagttgtag
     1621 atgttcagag tatcggtggc agcggcttcg gcattggcag caggtgcgct gcctgcttga
     1681 ggctgcacgg cgtttttttc gctgccgccg caggctgcca gagacagcgc ggccaaaacg
     1741 gctaatacgg attttttcat acgggcagat tcctgatgaa agaggttgga aaaaaagaaa
     1801 accccgcgcc ccataaacac cccggcgcaa ggtttgggca ttgtaaagta aatttgtgca
     1861 aactcaaagt atattggact gatttttttg aaaatttgac acttttgcgc ccaaaggcgg
     1921 aggatgtgcc ggattttgcc gcccgcgcgc gccggtaaaa cggcttatgg gaaaataaag
     1981 ggaaaaggct tgcatataat gcaaaccccc tttaaaattg cgcgtttaca gaatttattt
     2041 ttctttcagg agattccaat atggcaaaca gcgcacaagc acgcaaacgt gcccgccagt
     2101 ccgtcaaaca acgcgcccac aacgctagcc tgcgtaccgc attccgcacc gcagtgaaaa
     2161 aagtattgaa agcagtcgaa gcaggcgata aagctgccgc acaagcggtt taccaagagt
     2221 ccgtcaaagt catcgaccgc atcgccgaca aaggcgtgtt tcataaaaac aaagcggctc
     2281 gccacaaaag ccgtctgtct gcaaaagtaa aagcactggc ttgatttttg caaaaccgcc
     2341 aaggcggttg atacgcgata agcggaaaac cctgaagccc gacggtttcg gggttttctg
     2401 tatttcgggg gtaaagttcg aaatggcgga aagggtgcgg ttttttatcc gaatccgcta
     2461 taaaatgccg tttgaaaacc aatatgccga caatgggggc ggagatgaat acacgaaata
     2521 tgcgctatat tcttttgaca ggactgttgc cgacggcatc cgcttttgga gagaccgcgc
     2581 tgcaatgcgc cgctttgacg gacaatgtta cgcgtttggc gtgttacgac aggatttttg
     2641 cggcacagct tccgtcttcg gcagggcagg aagggcagga gtcgaaagcc gtactcaatc
     2701 tgacggaaac cgtccgcagc agcttggata agggcgaggc ggtcattgtt gttgaaaaag
     2761 gcggggatgc gcttcctgcc gacagtgcgg gcgaaaccgc cgatatctat acgcctttga
     2821 gcctgatgta cgacttggac aaaaacgatt tgcgcgggct gttgggcgta cgcgaacaca
     2881 atccgatgta ccttatgccg ttttggtata acaattcgcc caactatgcc ccgagttcgc
     2941 cgacgcgcgg tacgactgta caggaaaaat tcggacagca gaaacgtgcg gaaaccaaat
     3001 tgcaggtttc gttcaaaagc aaaattgccg aaaatttgtt taaaacccgc gcggatctgt
     3061 ggttcggcta cacccaaaga tccgattggc agatttacaa ccaaggcagg aaatccgcgc
     3121 cgttccgcaa tacggattac aaacctgaaa ttttcctgac ccagcctgtg aaggcggatt
     3181 tgccgttcgg cggcaggctg cgtatgctcg gtgcgggttt tgtccaccag tccaacggac
     3241 agagccgtcc cgaatcgcgt tcgtggaaca ggatttatgc catggcaggc atggaatggg
     3301 gcaaattgac ggtgattccg cgcgtgtggg tgcgtgcgtt cgatcagagc ggcgataaaa
     3361 acgacaatcc cgatattgcc gactatatgg ggtatggcga cgtgaagctg cagtaccgcc
     3421 tgaacgacag gcagaatgtg tattccgtat tgcgctacaa ccccaaaacg ggctacggcg
     3481 cgattgaagc cgcctacacg tttccgatta agggcaaact caaaggcgtg gtacgcggat
     3541 tccacggtta cggcgagagc ctgatcgact acaaccacaa gcagaacggt atcggtatcg
     3601 ggttgatgtt caacgactgg gacggcatct gaataccgtt tcaaacggca tatcaagttg
     3661 ccgtgccgtc tgaagccgcc ggcggtttgg cggggcggga taaaaaattc gtttgaatcc
     3721 gggcaaacgc gtataatgtg cggtttgtac ggactttgtc ggaatcaagc aagatgacgg
     3781 aacctgcggc cgaaggcggc aaagctgcca aggcgttaaa aaaatatctg attacaggca
     3841 ttttggtctg gctgccgatt gcggtaacgg tttgggtggt ttcctatatc gtttccgcgt
     3901 ccgaccagct tgtcaacctg ctgccgaagc aatggcggcc gcaatatgtt ttggggttta
     3961 atatccccgg gctcggcgtt attgttgcca ttgccgtatt gtttgtaacc gggttatttg
     4021 ccgcaaacgt gttgggccgg cagattcttg ccgcgtggga cagcctgttg ggtcggattc
     4081 cggttgtcaa atccatctat tcgagtgtga aaaaagtatc cgaatcgctg ctgtccgaca
     4141 gcagccgttc gtttaaaacg ccggtactcg tgccgtttcc ccaatcgggt atttggacaa
     4201 tcgcattcgt gtccggtcag gtgtcgaatg cggttaaggc cgcattgccg caggatggcg
     4261 attatctttc cgtgtatgtc ccgaccacgc ccaacccgac cggcggttac tatattatgg
     4321 taaagaaaag cgatgtgcgc gaactcgata tgagcgtgga cgaagcgttg aaatatgtga
     4381 tttcgctggg tatggtcatc cctgacgacc tgcccgtcaa aacattggca ggacctatgc
     4441 cgcctgaaaa ggcggagttg cccgaacaac aataaagctg ccgttcagac ggcattttcc
     4501 gttttcagtt taaatcaata aaaggtgatt ttatgcgtac caactattgc ggcctgatca
     4561 gcgagcaata cttaggccaa accgttaccg tcaaaggctg ggtacaccgc cggcgcgacc
     4621 acggcggtgt gatttttatc gacctgcgcg accgcgaagg catcgtccaa gtcgtgatcg
     4681 atcccgacac gcccgaagcg tttgccgctg ccgattccgc ccgtaacgaa tacgttttgg
     4741 gcattgccgg ccgcgtacgc aaccgtcccg aaggcacgac caacgataaa atgatttccg
     4801 gcaaaatcga gattcttgcc aaagaaatcg aagtgttgaa cgccgccgct acgccgccgt
     4861 tccaaatcga cgacgaaaac atcagcgaaa acgtgcgcct gaccaaccgc gttatcgacc
     4921 tgcgccgccc tgtgatgcag cgcaacctgc gcctgcgtta ccaagtcgct acgggcgttc
     4981 gccgttatct ggacgcgcaa ggcttcatcg acatcgaaac gccgatgctg acccgctcca
     5041 ctccggaagg cgcgcgcgac tacctcgtac cgagccgcgt tcatccgggc gagtttttcg
     5101 cgctgccgca atcgccgcaa ttattcaaac aactgttgat ggtggcgggt ttcgaccgtt
     5161 actaccaaat caccaagtgc ttccgtgacg aagacttgcg cgccgaccgc caacctgaat
     5221 tcactcaaat cgacttggaa acctcgttcc tgaacgagga tgaaatcatg gacatcactg
     5281 aaggcatggc caaacaagtc ttcaaagatg ctttgaacgt agatttgggc ggcttcccac
     5341 gcatgcctta ttctgaagcc atgttctact acggctctga caaaccggac atgcgcatca
     5401 acttaaaatt caccgagttg accgacctga tgaaaacgga agaattcaaa gtcttccgtg
     5461 gcgcagccga catgaaaggc ggccgcgtag tcgctctgcg cgtgcctaac ggcgccaaat
     5521 tcagccgcaa agaaatcgac gaatacacta aatttgtcgg catctacggc gcgaaaggtc
     5581 tggcatacat caaagtaaac gatgcgggca acctctccaa cggcgaagac agcggcctgc
     5641 aatctccaat cgtaaaattc ttgtctgaaa acgccctgaa agaaatcatc gagcgtaccg
     5701 ccgcgcaaaa cggcgacatc atcttcttcg gtgcggacaa agccaaagtc gtgaacgaag
     5761 ccgtcggcgc attgcgtatc aaagtcggct tggaacacgg caaagacaac ggctacttca
     5821 cagacgaatg gaaacctttg tgggttgtcg atttcccgat gttcgaatac gacgaagaag
     5881 ccgaccgcta cgttgccgta caccatccgt ttaccgctcc taaagaaggt catgaagacc
     5941 tgatggtttc cgatcctgca aactgcctgg cccgtgccta cgatatggta ttgaacggct
     6001 gggaaatcgg cggaggctct atccgtatcc accgtgcaga cgtacaaggg aaagtgtttg
     6061 ccgcgctgaa aatcagccct gaagagcaac aagagaaatt cggcttcctc ttggacaacc
     6121 tgaaattcgg tgcgcctcct cacggcggcc ttgcattcgg cctcgaccgt ctggtaacgc
     6181 tgatgaccgg tgccgaatcc atccgcgacg tgattgcctt cccgaaaaca caacgcgccc
     6241 aatgcctgct gaccgatgcg cccaacagcg tggacgataa gcagttgcgt gaattgagcc
     6301 tgcgtctgcg tcaaaaagca gttgaaacaa aagaagcata aggaaaacag agccgtttga
     6361 cggctctgtt ttttcagacg gcatttacgc ttcttgactt ccctctaatt caaacctaat
     6421 tttgctgtgt tttaatggcg gtattgaaaa acacatcttg ttcaatcaac cgataaaaaa
     6481 aggactgaaa atgaaaaact gttattggcc gccgttgttt ccctaaatgc cgcaaccgca
     6541 tttgccggcg actctgccga gcgtcagatt tacggcgatc cccattttga acaaaaccgc
     6601 acaaaagccg tgaaaatgtt ggaacagcgc ggttatcagg tttacgatgt cgatgccgac
     6661 gaccactggg gcaaacctgt tttggaagtg gaagcctata aagacggccg cgaatacgac
     6721 atcgtgttgt cttaccccga cctgaaaatc atcaaagagc agctcgatcg ctgactcctt
     6781 tgatggaaag atgaaccaaa atgccgtctg aagcgttcag acggcatttt gcctgttcct
     6841 catcaggtat gaggcaggct tttcttatta aaaaaatgac atttcacgct gatttgttat
     6901 aatcattcct tttcaacacg acagacggag caggtttatt atgcctatcc ttaccatccg
     6961 tgaagtgtgc aacattaatc attggagcat aggttattat gatgttgacg attccggcga
     7021 aatcatcgtc cgccccaatc cctcgcaaca caatcaaact gtttcactgc aaaaactgac
     7081 tgaagccgtg caacaaaaac atcaggcgcg cctgcctgtt ttgttttgtt ttccgcaaat
     7141 cctcgaacac cgcctccgcg acattaaccg cgcctttcag acggcacggg aagagtgcgg
     7201 ctataagggc ggttattgtt tggtttaccc tatcaaggtc aaccaacacc gccgcgtcat
     7261 cgagtcgctt atgtcaagcg gacaaccgca tggtttggaa gccggttcta aagccgaact
     7321 gatggcggtt ttggcacacg ccggcacccg gcaaacatta atcgtctgca acggctataa
     7381 agaccgtgaa tatatccgtt tcgccttgat gggcgaaaaa ctggggcatc aggtttattt
     7441 ggtgattgag aagctgtccg aaatacaaat ggtattggaa gaggcggaaa aactcggcat
     7501 caagccccgt ttgggtgtgc gcgccagact ggcttcccaa ggttcgggaa aatggcagtc
     7561 ttcgggtggg gaaaaatcaa aattcggctt gtcggcttcc caagttttgc aactggtcga
     7621 tattttgaaa caaaaaaaca ggctggactg cctgcagctt ttgcatttcc atttgggctc
     7681 gcagcttggg aacatccgtg atgttgccac aggtgtacac gaatcggctc ggttttatgt
     7741 tgagttgcac aaactggggg taaatatccg ctgttttgat gtaggtggcg ggcttggcgt
     7801 ggattacgaa ggaaaccgca cacaatcgga ttgttccgtt aattacagcc tgaacgaata
     7861 tgccgccaca gtcgtatggg gcatcagtca ggcttgtctc gaacacgggc tgccgcatcc
     7921 gacaatcatt accgagagcg ggcgcggcat taccgcacat cacgccgttt tggttgctaa
     7981 tgttataggc gttgaacgtt acaaaccgcg tcggctggat gcgccatcgc ccgaagcacc
     8041 gcgtgtgttg cacagtatgt gggaaacttg gacggatatt tccgcctcgc gggaaaaacg
     8101 ttccttacgc agctggatac acgaagggca gtttgatctt gccgatgtgc ataatcagta
     8161 taatgtcggg ctgttgagtt tggcgcaacg tgcgtgggcg gagcaactgt atttaaatat
     8221 ctgtcatgaa gtcggcgaat tgtttaatga aaaacaccgg tctcaccgaa ccattattga
     8281 cgaattgcaa gaacgttttg ccgataagct gtatgtcaat ttctcactct tccaatcttt
     8341 gcccgatgct tggggcatag atcaactttt ccctgtttgt cctattaccg gtttgaatga
     8401 accgattgcg cgccgcgccg tgttgttgga cattacctgc gattcagacg gtacgattga
     8461 ccactacatc gacggcgacg gcatcgccgg tacgatgcct atgcctgatt atcccgaaga
     8521 agagccgccg tttttaggct tttttatggt gggggcatat caggaaatac tcggcaatat
     8581 gcacaatctt ttcggcgaca ctgccactgc tgatgttgtt gtaagggaag acggacaatt
     8641 taccgtcatc gattacgatg aaggaaacac cgttgccgat atgctcgaat acgtttatca
     8701 agatccgaaa gagctgatga aacgctatcg cgaacaaatc gaacattcag accttcctgc
     8761 ctcgcaggct atgtctttct taaaagaact cgaagcgggg cttaatggtt atacctattt
     8821 ggaagacgaa tagacgcatc aaggtatcgg atatgtcgtc tgaagcccga ttttcttact
     8881 caaacaccaa tcatcacgac cgattgaaac caattacaag gaatcattac gatgcaatac
     8941 agcacactgg caggacaaac cgacaactcc ctcgtttcca ataatttcgg gtttttgcgc
     9001 ctgccgctta attttatgcc gtatgaaagt catgccgatt gggttattac cggcgtgcct
     9061 tatgatatgg cggtttcagg gcgttccggc gcgcgtttcg gtcctgaagc catccggcgc
     9121 gcctccgtca acctcgcttg ggagcaccgc aggtttccgt ggacatttga tgtgcgcgaa
     9181 cgcctgaaca ttattgattg cggcgacttg gttttttctt ttggcgacag cagggatttt
     9241 gtcgaaaaaa tggaagcgca cgccggcaaa ttactttctt tcggcaaacg ctgtttgagt
     9301 ttgggcggcg accatttcat taccctcccg ttgttgcgcg cccacgcccg ctatttcggc
     9361 aaactcgcac tgattcattt tgacgcgcac accgacacct acgacaacgg cagcgaatac
     9421 gaccacggca cgatgtttta taccgccccc aaggaaggcc tcatcgaccc gtcccgttcc
     9481 gtacaaatcg gcatacgcac cgaacacagt aaaaaattgc cttttactgt gttgtccgcc
     9541 cccaaagtca atgaagacag tgttgaagag accgtccgta aaatcaaaga aaccgtcggc
     9601 aatatgcccg tttacctgac tttcgacata gactgtctcg acccgtcgtt cgcccccggg
     9661 accggtacgc ccgtatgcgg cggcttgagc agcgacaggg cattaaaaat cctacgtggg
     9721 ctgacggatc tcgacatcgt cggtatggat gttgtagaag ttgccccctc ttacgaccaa
     9781 tccgacatta ccgctttggc cggcgccaca attgccttgg aaatgcttta ccttcaaggt
     9841 gcgaaaaagg actgaacgtc cggcatcccc cgggttttcg ccgtgccgtt caaacggcgt
     9901 attcagtcta atgaaaattc aaatactgaa acaaaagttg cccggagccg catatcggaa
     9961 agacggtgaa atatcgtaat ataacttata aaacaattag ttaaatatta tttttccgat
    10021 ttttcgggac ggtctttttt acggaggtca atatgatgaa attgggtttc aaaccgatac
    10081 ccctcgccat tgccgcagta ttgtgcgccc tggttttggc actgcccgta cccgacgggg
    10141 tcaagcctca ggcttggacg ctgctggcta tgtttgtcgg tgtgattgcc gccattatcg
    10201 gcaaggttat gccgttgggc gcgctgtcga ttattgccgt cgggttggtc gcagtaaccg
    10261 gcgtaaccgc cgacaaaccg ggcgcggcga tgagcgatgc gttgagtgcg ttcgccaatc
    10321 cgttgatttg gctgattgcc atcgcagtta tgatttcgcg cggtttgctc aaaacagggc
    10381 tggggatgcg tatcggatat ttgtttatcg ccgtttttgg aagaaaaacg ctgggcatcg
    10441 gttacagtct cgctctttcc gaactgctgc tggctcccgt taccccttcc aataccgcgc
    10501 gcggcggcgg cattatacat ccgattatgc agtcgattgc cggcagttac ggctccaatc
    10561 ccgcaaaagg cacagaaggc aagatgggta aatatttggc tttggtcaat tatcattcca
    10621 atcccatttc gtcggctatg tttattactg caactgcccc caacccttta atcgtcaact
    10681 tgattgccga aaatttaggc agtagtttcc gtctttcttg gggggcgtgg gcgtgggcaa
    10741 tggctgttcc cggcgttatt gcctttttcg ttatgccttt gattttatat tttttgtatc
    10801 cgcctgaaat taaagaaacg cccaatgctg ttcaatttgc caaagaccgt ctgagcgaga
    10861 tgggtaaaat gtcggcagac gaaatcatta tggcggtcat tttcggtatc ttgctgctgt
    10921 tgtgggcaga tgttcccgcc cttattaccg gcaatcacgc ttttagtatc aacgccaccg
    10981 ccaccgcatt tatcggatta agcctgcttt tgctttccgg tgtattgact tgggacgatg
    11041 ttttgaaaga aaaaagcgcg tgggatacga ttatttggtt tggcgcattg attatgatgg
    11101 ccgcattttt aaataaactc ggactgatta aatggttctc cggagtgttg gcggaaagtg
    11161 tcggcggttt gggcgttagc ggcacggctg cgggcgtaat cctcgtgctt gcttatatgt
    11221 atgcgcatta tatgtttgcc agtactactg cacatattac cgctatgttc ggcgcatttc
    11281 tcgctgctgc cgtttcactg aatgccccgg cgatgccgac cgcgctgatg atggcggccg
    11341 catccaacat tatgatgacc ctcactcatt atgcgaccgg tacttcacct gtgattttcg
    11401 gctcgggcta caccacaatg ggagaatggt ggaaggcggg ttttgtcatg agcgtagtca
    11461 attttctgat tttttccgtt atcggcagca tttggtggaa agttctggga tattggtaaa
    11521 gggaaaaata aatttccaat ctgtgtttat ttgattgggc gactattatc gtgaaatatg
    11581 ccgtctaaag ccttcagacg gcatatttgt gcgcttggat gttgcagaaa gcggcagggc
    11641 ggcggtgtag gaaaagccaa acaaaaacca aaccgcctgt caacttctga taaacataag
    11701 tattaaataa tcagaaggtt attcaattac ctaaacgcaa attcccctgc cgtatcacat
    11761 ctattgaaaa taatacatca accggctcgg aagcagcctg atcaggtgat tctacttgcg
    11821 gcgatgaatc ggcagccggt tcggtatagg cagtcggcgt gccgtcggat tgggtattta
    11881 aatgcgcttg tgcctcgggc gtgtgtacat caggcacttc gggcgtgcgt gtctcggata
    11941 cttcggcaga gttggtttcc tcagtttgtt caatgacttc agcttggctg tatgaggaag
    12001 aaccctgtat ccacgccagc gatttgagcg gcatcttcat cttgccgttt ttgccgcagg
    12061 tcagacagac ggccgatccg gtgcggtctt tgagtacggc atcgactttc tcgggcgcga
    12121 tggttttgcc ctgtgttttt gcccattgcc cgatgctttt tttcagggag gcggtgtcaa
    12181 ggttgttctt accgtaaggg tcgcggaagg cggcaagcca caggttgcga tccgcatctt
    12241 cattgaggcc cgccatttga tagatgacgg aggcgggcga gccggtggcg atggttttgg
    12301 caaactcgag cgcgtcgggc gatttcatgc ggacgcagcc gtgactccgg atgcccggga
    12361 cgctggccgg tgcattggtt ccgtgtatgc ccaaaccgag tttcgggtct cctaagcgga
    12421 caaaaaccgg ccccaaaggg ttgtccgggc cggcggctat ggtttttacg ccgtcgccgc
    12481 gttctttctg tatggatttt gggatgtgcc aaacagggtt ataggctttc gccccgattt
    12541 tatgttcgcc tagattggtt tgtgtcatcg cccgacctac tgcaacggga taaaccttgg
    12601 tcagtttgcc gtcggtgtag aggaacaggc gttgctgagg gatgttaatg aagacatgtt
    12661 gaccttgtgc gacgggggag acatcgggaa tgacggtgtt tgcgtatgaa aaaccgctta
    12721 tcaatagtgc ggcagtgcgg cagattgttt tattcatatc aaaatatggt gtgtgtccga
    12781 taggttttcg gcaaatcata cctgaaaccg taccaatttg tgcgaaaata tgcgcttcgg
    12841 tacagtgcgg acggattggg taatggcaac ggaaacaaat atcgcggaaa tttccgcctt
    12901 ggattatgaa ggcaggggtg tggcaaaggt cggcggcaaa acgattttca ttaaaggggc
    12961 attacttgat tgtttgatgc tgggttgctt caggctttaa ctcaggaata tttacatcat
    13021 aatgaaagtt tttagacaac agcttgaaca actcggcgcg caaaatcaat atcgttcgat
    13081 tccggatttg attcatcaag ggcggtatat tacgcgggaa aaccgcaaaa tgctgaatat
    13141 gtcgtctaat gattatttgg ggttggcatc agatgaaaac ttacgccggt cttttttgca
    13201 gcaatacggc ggtaattttc cctcttttac cagttcttca tcacgtttat taacgggcaa
    13261 ctttcctatt tataccgatt tggaagagct tgtcgcacaa cgtttccaac gggaaagcgc
    13321 gttattgttc aacagcggct atcacgccaa tctcggtatt ttgcctgctt tgacgacgac
    13381 gaaaagtttg attttggcag ataaattcgt tcacgccagt atgattgacg gcatccgttt
    13441 gagccggtgt gcgtttttcc gttatcgtca taatgattat gaacatttga aaaatctgct
    13501 tgaaaaaaac gtcggaaaat ttgaccgcac ttttatcgtt accgaatctg ttttcagtat
    13561 ggacggcgat gtggcggatt tgaaacagct tgtccaatta aaaaaacagt ttcccaatac
    13621 ttatctttat gtggatgaag cccacgcaat cggtgtttat gggcaaaacg gattggggat
    13681 tgccgaacgg gataatctga ttgccgagat tgatttattg gtcggcactt tcggtaaagc
    13741 cttagcctcg gtgggggcgt atgccgtctg caaccaagta ttgaaagaat gtttgattaa
    13801 tcaaatgcgc ccattgattt tttcaaccgc attgccgccg tttaatgtgg cttggactta
    13861 ttttattttt gaacgattgc cgcaattctc aaaagaaaga agtcatcttg agcagttaag
    13921 cgcattttta cggcgggaag tggcgcatcg gacgcaaata atgccgagcg aaacctgtat
    13981 cgtcccctat attttaggcg ggaatgaagc cacccttgcc aaagcggaat atctgcaagg
    14041 tcagggttat tattgcctgc ccatcagacc gccgacagta ccaaaaaaca catccagaat
    14101 ccgcctgtct ttaactgccg atatgacaac ggatgaagtt cggcagtttg cggcgtgcct
    14161 gtaaggatat gatatgaaaa caaaatttta caatcatcaa ggcgaacatt taatcctgta
    14221 ttttgcaggt tggggaatgc cgcccgatgc tgtaaatcat ttgattttgc cggaaaatca
    14281 cgatttattg atttgctatg attatcaaga tttaaatttg gattttgatt tttccgccta
    14341 tcggcacatc cgtttggtgg cgtggtcaat gggcgtttgg gcggcagaga gggcattgca
    14401 aggaataaga ttaaaatccg caacggcagt gaatggcaca ggtttgcctt gcgatgataa
    14461 tttcggtatc ccttgcgccg tttttaaagg cacattggag aatctcacag aaaatactcg
    14521 ttcaaagttt gaacgtagaa tctgtggcga taaagcatct tttgaagatt accaacaatt
    14581 tcccgcccgt ccgtttgacg aaattcatca agaacttacc gcactttttg cgatgatcgg
    14641 gcaagatagg cgtacagatc ttatccgctg gacaaacgcc ttgttcggat cgggcgataa
    14701 aatttttatt cctgccaatc agcaccgata ttggacaccg cgttgcaccg ttcaagaaac
    14761 agacggcggg cattacctgt tttcaagatt tacccattgg tcggcactat ggaatcactg
    14821 actgccataa ataaaccgcg cattcggcag gctttccaaa aagcattaag cgattatgac
    14881 aggcacgcct taatccaaca aaaaatgacg attaatctaa tcgcgcattt gcaagattat
    14941 ttgccggata tgccattgga aaacgtgttg gaattgggct gcggctcagg aatgttgagt
    15001 gccttgctgc aaaaacagat ttcagcgaat tattggttat ttaatgattt gtgcgatgta
    15061 cgaagccgac tggctgaaaa actgcctcaa tcctttgatt tttattgcgg cgatgcggaa
    15121 aattttcctt ttcaacgaca atttgactta atcgcaagcg catctgccgt gcaatggttt
    15181 caccaacccg acgcttttat cgcccattgc aaaacaggct tgaaaacaaa cggattattg
    15241 gcggttgcga cctttggcaa agacaattta aaagaagtcc gccaaatcac aaatataggc
    15301 ttaaattacc cgactttatc ccaatggcag gcttggttag ccaaagattt tgagctttta
    15361 tggtgtgagg attttaaggt aatactagac tttgatacgc cgttagatgt actcaaacac
    15421 cttaaatata caggcgttac cgccacgaac caaaaaaatt ggacaagaaa aaatctcaat
    15481 ggatttattg gcgattactt gtcggcgttc ggtatgccgt cgggcaaagt gcgcctgact
    15541 tatcatccgt tattttttat cgcgcgccac tctgcggcgg gcaggcaata aggcagctta
    15601 tgggcaaagt tatttttata tcgggtattg atactgatgt gggtaaaagg taatatggcg
    15661 agccttatgc agaaggcata ttgtcaaacg tta
//
LOCUS       DAXGCP010000056        15253 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.056, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000056 DAXGCP010000000
VERSION     DAXGCP010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15253
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.056"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(166..345)
                     /locus_tag="ACFJCW_001435"
     CDS             complement(166..345)
                     /locus_tag="ACFJCW_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HFC4151557.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYMHLLFCPHCREYKRQL
                     QTIKISLAKTTRTSK"
     gene            complement(351..938)
                     /locus_tag="ACFJCW_001436"
     CDS             complement(351..938)
                     /locus_tag="ACFJCW_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HFC4151558.1"
                     /translation="MPLPDLTDAELMESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTALDDELLDEAFESHFSQN
                     GHWTPEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSNEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            complement(960..1706)
                     /locus_tag="ACFJCW_001437"
     CDS             complement(960..1706)
                     /locus_tag="ACFJCW_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HFC4151559.1"
                     /translation="MQPETSAQYQHRFSQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSKEWSRLKEGFVRDARAQTPYFQEIPGEFLQYCQSPPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNDSKYTPSPAAFIRQYRYDVTHDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPKADNWKNILLGKWSG
                     WIEQRIIIPSLSAISENMEGNSPSQNHLSA"
     gene            complement(1696..2538)
                     /locus_tag="ACFJCW_001438"
     CDS             complement(1696..2538)
                     /locus_tag="ACFJCW_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HFC4151560.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGRAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMCRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLENVDAGRVCYIHIAGHDAETPELLIDT
                     HGAAVLPTVWDLLELAYTKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEY
                     RRAA"
     gene            complement(2656..2964)
                     /locus_tag="ACFJCW_001439"
     CDS             complement(2656..2964)
                     /locus_tag="ACFJCW_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151561.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAAHKPASNATGVQKSAQGSCGA
                     SKSAEGSCGAAASKAGEGKCGEGKCGATVKKAHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            complement(3038..3487)
                     /locus_tag="ACFJCW_001440"
     CDS             complement(3038..3487)
                     /locus_tag="ACFJCW_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HFC4151562.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNFAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPRCRLKQD"
     gene            3837..4730
                     /locus_tag="ACFJCW_001441"
     CDS             3837..4730
                     /locus_tag="ACFJCW_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HFC4151563.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVA
                     LALGGGASKGFAHIGIVKVLKENGIPVKVVTGTSAGSIVGSLLASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRQIQQFPIKFAAVATDFETGKAVVFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHKYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PSKNVGQGFFSYLDQTLNVMSVSVLQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            4833..5936
                     /gene="prfB"
                     /locus_tag="ACFJCW_001442"
     CDS             4833..5936
                     /gene="prfB"
                     /locus_tag="ACFJCW_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HFC4151564.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVIGLSE
                     DPELWNDPKRAQEIGKESKILEGIVLTLDNIASGIEDNRMLIEMAVEENDEEGFAAVK
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            6015..6374
                     /gene="rnpB"
                     /locus_tag="ACFJCW_001443"
     ncRNA           6015..6374
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACFJCW_001443"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(6705..8162)
                     /locus_tag="ACFJCW_001444"
     CDS             complement(6705..8162)
                     /locus_tag="ACFJCW_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC4151565.1"
                     /translation="MSRHPARTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISSGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGAATGFLLLLLVPKLNKMLEGTD"
     gene            complement(8944..13113)
                     /locus_tag="ACFJCW_001445"
     CDS             complement(8944..13113)
                     /locus_tag="ACFJCW_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HFC4151566.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPAPPAKKRRPLLKLSAALLS
                     VLILAVCFLGWIAGTEAGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITDISAGDIAIVTKPTPPKEERPPQGLPDSIDLPA
                     AVYLDRFETGKISMGKTFDKQTVYLERLNAAYRYDRKGHRLDLKAADTPWSSSSGSAS
                     VGLKKPFALDTAIYTKGGFEGETIHSTARLSGSLKDVRAELTIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGGFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGTGTARTDGSLAIASDPAN
                     EQRKLVFDTVNISAGEGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQFPAGNING
                     SIHLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIVKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGTARN
                     LHIGKAADIRSLDFTLKGSPGTSRPMRADIKGGRLSLSGGAAVVDTAGLTLEGTGAQH
                     RIRTHAAMTLDGKPFKLDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERLAASAANWQAMGGSLNLQHFSWDRKTGISAKGGARGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGHNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLGIGNAFGGNMANTPLGGRITASLPDLGALKPFLPAAAQNITGSLNASAQ
                     IGGRVGSPSVNAAVNGSSNYGKINGNITVGQSRSFDTAPLGGRLNLTVADAEAFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVSMENSVPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAASLPVNMNLTLDLN
                     DGIRFSGYGADVTIGGKLTLTAQPGGNVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYGISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRLFGSD
                     KKDSAGNGKGK"
     gene            complement(13168..15015)
                     /locus_tag="ACFJCW_001446"
     CDS             complement(13168..15015)
                     /locus_tag="ACFJCW_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HFC4151567.1"
                     /translation="MHDTRTMMIKPTSLLLPALFFFPHAYAPAADLSENKAAGFALFK
                     SKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATADL
                     NVVVDSGRPIAFGDFEITGTQRYPEQTVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDVDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTVARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
BASE COUNT         3323 a         3769 c         4522 g         3639 t
ORIGIN      
        1 aatatgggaa attgatgcag ccttcgtgtt ttacgtattt atatattccg tatggaggaa
       61 tatgctgctt ttgaagagtg tattatggat gaactgccga taacagtaaa tcggtttgat
      121 ttgtttccgt cagcttatgc cgtctgaagc cctttcagac ggcatttatt ttgaagttct
      181 ggttgttttt gccagtgata ttttgatggt ttgaagctgt cttttatatt cccggcaatg
      241 cgggcagaac agcaggtgca tatatatgga aatcttctcg cccggggtgg tttcccggtc
      301 ctgatgtttg gaaagaagca gggcaatatc gcggcatttt ttcataacgt ttacttcggg
      361 ttttcttggt tgaaccattt gatttgcagg cattggcgca atgattctcg ggcgcggtgc
      421 ataatggtgt ggtagttgga cgtgctgata ccgcacattt gttgtatttc gttggatgaa
      481 aaaccgagta tttccttcag ggtgaatacc cgtgcggtgt tttcaggcag gttgtatagg
      541 cagctttgca gaattttttg gaattcgttg ttatttaatg atttttccgg agtgttccaa
      601 tgttgcggct gcccttccgg cgtccaatgc ccgttttggg aaaaatggct ttcaaatgct
      661 tcatccagca gctcgtcatc cagtgcggta aagactttcc tctgcctccc gatttgacgt
      721 aatgcgtcaa taattttgtt tttcaatatg gcaaaaagcc agctgttgac aagtgccctg
      781 ccttgaaaac tgtcgcctgc gctgtatgcg gacagcaatg tttcctgcac taaatcttca
      841 gccaaatcag ggtggtcggg caactggagc cgcgcaaaat gcagaagcag tttgcgcgac
      901 tccattaatt cggcatcggt caggtcgggt agcggcatag tatcgggaac aaggtaattt
      961 tatgcggata gatggttttg gctcggggaa ttgccttcca tattttcgga tatggcggac
     1021 aaggagggga tgataatcct ttgttcaatc cagcctgacc atttcccaag caaaatattt
     1081 ttccaattat cggctttagg cataaattcg acaagggttt gggcgagggt gtcaaacgaa
     1141 agcgcggagg aacccattat ctccagcagc atcatatcga agccgtccaa tgtttggtac
     1201 atcacatcat cttcggcgtt tcgccatatt aacaaggctg tttccgcttc ctgcaaatca
     1261 tgggtaacat cgtatcgata ttgccggata aaggccgcag gggagggcgt gtatttgctg
     1321 tcatttgaat aatgaatgtc gggaatatcc ggaatttgtg caacttctgc cagcaattgg
     1381 gtatattcaa aatccatcag cgccaaaatg ccgtctgaaa gcggcgggct ttggcaatat
     1441 tgtaggaact cgccggggat ttcttgaaaa tagggcgttt gggcacgcgc gtcgcggacg
     1501 aaaccttctt tcagacggct ccattctttg ctgtcaaagt attgccgcgt ttcggtatag
     1561 cagcggtcga taaagctgtg gatattgttg cgtatcaggc ggatatagac gttcaatcgg
     1621 tcttgcggca gaccgtctgc ggcttcgccc ccgcgtatgg cttgggagaa acggtgctgg
     1681 tattgggcgg aggtttcagg ctgcacggcg gtattccttt ccggcacgcg tttgataatc
     1741 ggcaattttg gcaacttcgg cttcgagttc ggcaaaaggt gggaaattga aatcgcgttc
     1801 caacagggtg ggagggatgg tgggaagctt ggtgtaggcg agttcgagca agtcccaaac
     1861 ggtcggtaaa accgccgcgc cgtgggtatc aatcaaaagc tcgggggttt cggcatcgtg
     1921 tccggcgatg tggatgtagc acacgcgccc tgcgtccaca ttctctaaaa aggcctcagg
     1981 cgacagcagg ccgtgattga cggcgttgac gtaaatattg ttcacatcca aatgaatacc
     2041 gcagtcggct tcacgggcaa ccgcgttgag gaactcgacc tcgttcatct cggcaagcgg
     2101 agaatgcagg tagtaggacg tgttttccac ggcgatgcgg cagcccaaac ggtcttgcac
     2161 ttcgcggata cgccgcgccg tatgatgcac catttcttca gtgaaaggca gcggcaacaa
     2221 atcgtaaaga tgaccgccgt cgtggcagta gctcaaatga tcggagaaaa acgtgcagtc
     2281 ataacggcac atcatttctt tgatgccgtc tatcaaatcg gtatccagcg gggcttgtcc
     2341 gcccagcgac atagataatc cgtgcaacgc cagcggcagc cgttccgcca cacggtcaaa
     2401 ctgtttgcgc gccctgccgc ccattttcag ccagttttcc ggtgcggctt cgataaagca
     2461 tatcgggctg ttttcggaaa gcgagagaaa gtcttccgcc aaatcgcggc ggtagcccaa
     2521 gcctgcgtgt tgaatcatat ttttacccgg ttcggatggc acaaaagaat gatgtgcttg
     2581 ttaaaaaaaa tctttgtttg ccgttaaaaa agccgcattt tactgaaaaa cgcggcttgg
     2641 tttgaagggg cgggattatt tagaaccgca tttgccttcg ccgcatttgc cttcggcaga
     2701 tttggctttg gctttagatg ctttggtgtg tttgtgggct ttttttacag ttgcaccgca
     2761 tttgccctcg ccgcatttgc cttcgcctgc tttagaagca gccgcgccgc acgaaccttc
     2821 ggcagatttg gatgcgccgc aagagccttg ggcggatttt tgaacgcctg ttgcgttgct
     2881 tgccggtttg tgggcggcaa cggcgccggc ggccagagac agggataaag caccggcgag
     2941 tgcggcagca atgtttttgt tcatttctat ttccttttca gaatatcaag ttaacgagat
     3001 aaggttggaa tgtttaaagt cggattccac gactgaatca atcttgtttc agacggcatc
     3061 gggggcaaaa ccgttttttc agcagcgtat ccagcgacca tccgcccgca ccctggaaaa
     3121 gcagcgggat taataccacg atataaatta aagccatttt ataaccgttg tcgcagacat
     3181 tgtaacccga accggcgtga accgcagccc aagcgacggc ggtaacgacc atcagcccca
     3241 atgccgacag gcgcgttgcc aaacccaaaa gcaacagtac gggcagcaaa agctccgcat
     3301 acatggcgaa attccagttt aacgcgtccg gcagcaagtt gaacgggaat ggaaactgat
     3361 cgttgatttc ggaaaaccaa ttctccccgt tccatttttg caaacccgat tccaaaaatt
     3421 catatgcggc aaacagacgc aaaaccagca tagcggatgc cgtctgccaa gttgttccga
     3481 ttttcataag tgttcctgtt tttgttcctg ttgatacccc gttagacgga ttttgtcgga
     3541 aaaactgaca cccgtcagct aataatttaa caagttaatg aatataaaaa gaaagtattt
     3601 tgacggaaag aaagggaaaa aggcgggata tttggataac ggcggtgttg tgagataatt
     3661 cccgccttgg acggtatgcc ttcaaataca atttccgtaa aggaaaaaaa gaaaatatta
     3721 attttgatga tgatataaaa agcccccttt agcttggctg tcaaaggggg ggttaagaaa
     3781 agcaatcccc cccccctttt ttttgacggg gagcaatata taaaggaatg gaaaatatgg
     3841 taacgttttc aaaaatcaga ccacttttgg caatcgccgc cgccgcgttg cttgccgcct
     3901 gcggtacggc gggaaacaat gccgcccgca agccggtgca aaccgccaaa cccgccgcag
     3961 tggtcgcttt ggcactcggt ggcggcgcat ctaaaggatt tgcccatata ggaattgtta
     4021 aggttttgaa agaaaacggt attcctgtga aggtggttac cggcacatcg gcaggttcga
     4081 tagtcggcag ccttttggca tcgggtatgt cgcccgaccg cctcgaattg gaagccgaga
     4141 ttttaggtaa aaccgattta gtcgatttaa ccttgtccac cagtggtttt atcaaaggcg
     4201 aaaagctgca aaattacatc aaccgaaaag tcggcggcag gcagattcag cagtttccca
     4261 tcaaatttgc cgccgttgcc actgattttg aaaccggcaa ggccgtcgtt ttcaatcaag
     4321 ggaatgccgg gcaggcggtt cgtgcttccg ccgccattcc caatgtgttc cagccagtca
     4381 tcatcggcag gcacaaatat gttgacggcg gtctgtcgca gcccgtgccc gtcagtgccg
     4441 ctcggcggca gggggcgaat ttcgtgattg ccgtcgatat ttccgcacgt ccgagcaaaa
     4501 atgtcggtca aggtttcttc tcttatctcg atcagacgct gaacgtgatg agcgtttccg
     4561 tgttgcaaaa cgagttgggg caggcggatg tggttatcaa accgcaggtt ttggatttgg
     4621 gtgcagtcgg cggattcgat cagaaaaagc gcgccatccg gttgggcgag gaggcagcac
     4681 gtgccgcatt gcctgaaatc aaacgcaaac tggcggcata ccgttattga cgctatgccg
     4741 tctgaacgta tttccagaag gcttcatcca tagaaaaaaa tacccgaatc ccgtacaata
     4801 cgcccctaaa attttgaaag aacgaaagaa tcatggaagc cgaagtaatc aaccagctca
     4861 acaacaccct gaatgatttg gagaagcgta gcgaagacat ccgcgtttat atggattatc
     4921 agggcaagaa agaccgattg gaagaagtca tcgggctttc cgaagacccc gagctttgga
     4981 acgacccgaa acgtgcccaa gaaatcggca aagagagcaa aatccttgaa ggcatcgtgc
     5041 tgacgctcga caacatcgct tcgggtatcg aagacaaccg tatgctgatt gaaatggccg
     5101 tcgaagaaaa cgacgaagaa ggttttgccg ccgtgaagga agacgtggcg gggctggaaa
     5161 aacagatggc ggatttggag ttcaaacgga tgttcaacca gcccgccgac ccgaacaact
     5221 gctttatcga catcaccgcc ggcgcgggcg gtaccgaagc ggaagactgg gcggggatgc
     5281 tgttccgtat gtacagccgc tatgccgagc gcaaaggctt caaaatcgaa atccttgagg
     5341 aagacgacgg cgaaatcgca ggcatcaacc gcgccaccat ccgagtggaa ggcgaatacg
     5401 cttatggttt gctgcgtacc gaaaccggcg ttcaccgtct ggtgcgctac tcgccgtttg
     5461 attcgaacaa caaacgccat acctcgtttg cctccgtgtt cgtttaccct gaaatcgacg
     5521 attccatcga aatcgaaatc aaccccgccg atttgcgcat cgacacctac cgtgcatcgg
     5581 gcgcgggcgg tcagcacatc aacaaaaccg actccgccgt gcgtattacc cacgagccga
     5641 cggggattgt ggtgcaatgt caaaacgacc gttcgcaaca cgccaacaaa gcggccgcga
     5701 tggaaatgtt gaaatccaaa ctgtatgaat tggaaatgcg caaacgcaac gaagagaaac
     5761 aggcattgga agaaggtaaa tccgatgtgg gttggggcag ccaaatccgt tcgtatgttt
     5821 tggattcctc acgtatcaaa gacttgcgta caggctacga agtcggcaac accaaagccg
     5881 tattggacgg cgacttggac ggctttatcg aagccagcct gaaacagggt gtgtagttta
     5941 ggctgtatgc cgtctgaaac ctgtaccgtt tcagacggca tttttgcgtt tcgtgttata
     6001 atccgcgccg cacacgggac gggcagacag tcgccgcgta tcgcgtaagg catacgggga
     6061 ggaaagtccg ggctccgcag ggtagaatgc cggttaacgg ccgggcgcgg taacgcgacg
     6121 gaaagtggaa cagaaagcaa aaccgccgat ggctgctttg gcagcacagg caagggtgaa
     6181 aaggtgcggt aagggcgcac cgcgcatttg gtaacaatat gcggcaggcc aaaccccatt
     6241 cggagcaaga ccaaacagaa cgcaatgacg ctgcccgccg agcgttcggg taggttgctt
     6301 gagcataccg gcaacggtat gcctagagga atgactgtcc gagacagaac ccggcttacc
     6361 gcctgtccgg tgtgcatccg acacgcaaat gccgtctgaa acctgaaata cggttcggac
     6421 ggcattttta tttaggctgt gtttttatat tccgttgatg cagccctgat gagtcggaca
     6481 aaatgccttt tactcaatag gaccggtttc cgcccaagcg gaaataaacg gctatttccc
     6541 ttgcaaacag acggaatcag gcgggtattt aaatgacaat cggcaggctg ccttccggtt
     6601 ggggggggga aagcctgtcc tgtcgggtgg aaacggtttg gtttcattat gcggaaaaat
     6661 gccgtctgaa gggttcagac ggtatcggcg catcggggca ggacttagtc tgtgccttcg
     6721 agcattttgt tcaatttggg gacgagcagg agcagcagga agcctgtggc tgcgccgatg
     6781 tagaacagca gccggtagaa gccgatttcg tcgcccgcct gatagccttt ttcaaacaat
     6841 acgccgccca aagtgaagcc taatgaaaag gcaaggaaat taagggcgac catttgggtt
     6901 ttgaataaag gcggtgcgat tttggtggag atggacagcg caatcgggga aatcatcagt
     6961 tcgcctatcg tgatggcgag gacgatcagt gcgaaaaccg caataggcat cggcgttccg
     7021 gaggaaataa agggaacgaa tcccaaaaac gacgcgccgg taacaaatac cgccatagcg
     7081 aatttcagcg gggttttggg ttgtttgcgc cccatttttg tccacattgc cgccatgagt
     7141 ccggaaaaca ggatgaccca caggctttgc atagaatctt tccaggcgac gggtacggta
     7201 aacgaaccga tggtgcggtt gacggtttcg tcgaaataga cggttgccac ggtgtaaatc
     7261 tgaaaccaga cggcccaaaa catacagatg gtcaggaaaa gcgggatgta ggcgatgatg
     7321 tgccgtttgt tgtcggaact gacgcggggg ttggtcagca ggcgggcgaa ataggcgatg
     7381 acggcaagga tgacggtaga taagaggatg ccggagaaat tgtcgaggtt gacaagcccg
     7441 gttttgatgg cggttgcaag tgcggcgatg agggtgatgc cgacggcggc cgcagttttg
     7501 ccctgtcctt ttgaaagcgg atgggggacg gtggggtggg gcaggttttt acgtcccaag
     7561 gaataacgcc acaagccgaa tgccataccg accgccgccg cgccgaaacc ataatggaaa
     7621 ccgatgtttt cttgaagcag tccggtcaat aaggggccta agaagccgcc gatattgatg
     7681 gcgatgtaga aaatggaaaa tcccgcatcg cgcagcgggc gcatttcgtc ctgttcgtat
     7741 aatgcgccca ccatagaact ggccgtagat ttcacgccgc cgctgcccaa tgcgatgaat
     7801 atcagcccga ttagaaggcc gtacaggccc ggtgcggcgg caaggacgat gtgcccgagc
     7861 attacgacga tgcccgagag gaagagggtt ttttccgcac cccatacgcg gtcggcaaac
     7921 cacgcgccca aaatggtgga caggtacacg ctgccgctgt atgcgccgac aatgccgcct
     7981 gcgagggttt tgtctatgcc caagccgcct ttgtcggcgg tgtagtagag gtaaatcagc
     8041 aggatgccct gcattccgta aaatgaaaaa cgttcccaca attcgatatg gaagagggtg
     8101 gaaagctgga aggggtggcc gaaaaatgtt ttttctccgg tgcgggcggg atgccgggac
     8161 ataaaggttc tcctaaaaga ttttctctca ataccgtctg aaacggatgc ggacggcggc
     8221 ggtgtttttt tgtatgaaaa tatcggtttt taaccgatat tttcattctt tgtcaaacga
     8281 cgcgctgccg tttttcgcgg gcggatgttt ttatatttgt ttcaattcaa tggattgtat
     8341 tttagaggac gtgttccgat acggcgcggg taaatccttt tctgtcaatg gcttatccga
     8401 tagggcggtt tttacttaga tggaaaatca cttccttata tatccgccac gccgaagggc
     8461 gcattatggt ggattaactt taaaccggta cggcgttgcc ccgccccggc tcaaagggaa
     8521 cggttcccta aggcgcccaa gcaccgggcg aaccggttcc gtaccatttg tactgcctgc
     8581 ggcccgccgc cttgtcctga tttttgttaa tccgctatat ttttcttaac catcccttcc
     8641 aacagccgtg cgaaggtttt tttatatcag tgggaaatgc aatattctat tgtttttatt
     8701 gtagaatttt aaaaacagat tgttgtgttc cgcgtttttg ccggtttgga agcggtgggg
     8761 cgcatcagcc ttttataaag gcatatcgga agcctgtata aggtttttga acatatcgat
     8821 cctgttccct tgcaggcgga cggcagcggc ggatggcgaa aggcgggttt tcaaatgtcc
     8881 ggtttggcgg cgcgtctttc agacggcatg gcggcggagc gtgccgcgcc gtctgaaaac
     8941 cgtttatttc cctttgccgt ttccggcgga gtcttttttg tccgaaccga agaggcggtc
     9001 gaaacgtatg gtgtatgtca gctcgccgcc cgacgaacgg ctgccgatac gggcaaccgc
     9061 ctgtatggcg cgggtcagcc ggtaaatcag tttgacggac tgttccgcgc tggagatgcc
     9121 gtattcgtag ccgatgtaga gtttgccggt cagttgtttg ccgacggtca gcacctgttc
     9181 ggcggggttg agttcgccgg tttgcgcgtt gcggctgcgc ttgctggtaa agcccaaatc
     9241 atccaccagc ccgatgcggt cgttgatttg cccggcaagc agcgcgcctg cggctgcgga
     9301 cagggcggca ttgtcgccgc tgctgccgct gccggcacgg ttgaggatga gccaggagag
     9361 cttgtctttt tcactcatcg gttcgtttgc cgtcagcgta atgcgcgggc tgttgaggct
     9421 gcccaatatt tccacgcccg caccgacggg ggaaaggcgg cgttcggcgc ggatgttgag
     9481 gttggggtcg ttgagcgggc cgacaaagga gactgtgcct ttggtaatgt ctaaatcctg
     9541 cccgtatgct ttgtaacgcc ctttgatgac gcggaccgtg cccaccccac gcacatttcc
     9601 gcccggttgc gcggtcaggg tcagtttgcc gcctatggta acgtccgcgc cgtagccgga
     9661 gaagcggatg ccgtcattga ggtctaaagt caggttcata ttgacgggga gcgatgccgc
     9721 cgcctctttc ttgacttcgc ccaatacgac gacatcgtcg ccgacggacg gcatcgagga
     9781 tttttgcgaa ccgaacagcc cctgatcagt tttaatcata ccggtaacgg atatgccttt
     9841 ttgcggcgaa tagcgcaggc gggtgttgcc ggaaaccgtc aggcggcggt tggggcggga
     9901 caggatgcgg tatttgtcga acaccgcgcc gatatcgaca tcgggcacgc tgttttccat
     9961 gctgaccgtg ccggagagtt ccgccgtccc ttcgtgccgg aatttcaggc tgtcgattac
    10021 ccatttcctg cctgcaatat gcgaacgcag cgagccgttg tccaagatga tgccttgggt
    10081 ttggttgcgg taatagagct tgtcgccgtt gatactgccg cccaagtgcg ggtcggcgat
    10141 gctgccgccg agggttacgg cggcattcag gctgcctttg acggtttgtc cgaccggtag
    10201 gaagttgcgg aatgcttcgg catcggcaac ggtcaggttg agcctgccgc ccaaaggcgc
    10261 ggtatcgaag gagcggcttt gcccgacggt gatattgccg ttgattttcc cgtagttgct
    10321 gctaccgttg acggcggcat tgacggacgg agagcctacc cgtccgccga tttgcgcgga
    10381 ggcattcagg ctgccggtaa tgttttgcgc ggcggcgggc agaaagggct tcaatgcgcc
    10441 caagtcggga agggaggctg taatcctgcc gccgagcggt gtatttgcca tattgccgcc
    10501 gaaggcgttg ccgatgccca aatcggcgtt aatccgtccg aaacgcgcgc cgccgtcaag
    10561 caggattccg atgcggtcgt tttgaaagcg cgttttcagg gaaaatgcgt tcaaacccaa
    10621 agcctgcccg ccgggcaata cggcatcgcc gctttgccgg ctgatattga ggtagccgcg
    10681 cgcgttgtgc ccgtaggcga catcccagtc gccgtttaaa accagattgt gttcgaaggg
    10741 cggtttgaag aaattgtgca actcggcgat gtgcaggccg cgtgcgccgc cttttgccga
    10801 tatgccggtt ttcctgtccc aagaaaagtg ttgcaggttg aggctgccgc ccattgcctg
    10861 ccaatttgcc gcacttgccg ccaagcgttc cgcaccggct tcgagcgtca tacggttttg
    10921 cagcttgagg ttgaatgcgc cgccgatgtc gaggatgccg atgctgcctt tccatcgggt
    10981 aagttccctg ttgatgccgc ctgaagcgtc caaatcgagt ttgaacggtt tgccgtccag
    11041 cgtcatggcg gcgtgtgtgc ggatgcggtg ctgcgcgccc gtaccttcca gcgtcaggcc
    11101 ggcggtatcg acaaccgccg cgccgcccga cagggaaagg cggccgccct tgatatcggc
    11161 gcgcatcggg cggcttgtgc cgggtgagcc tttgagggta aaatcgagcg aacggatgtc
    11221 tgccgctttg ccgatgtgta agttgcgcgc cgtgccggaa aggtcggttt caaaggttcg
    11281 gataccgccg tccaaatcgc cggaaaggtg tccgcgtaca tttaaagacc ccgcgagtcc
    11341 gaaaccgaaa cgggataaat cgggtgcggt gatattgagg ttaagccggt cgcctttttt
    11401 gccgaagccg ccgtctgttt tgacgatgtt ccgccccaac cgcaaatcga cggcggcgcg
    11461 cggaaggtgg cgggactcgt aaacaatgtc ggcgctgccg gcaatcggca cgccgttgaa
    11521 cgtaccgggc aaaaaacgca ttttgcccgt aaatttctct tttgccagtt caccggcaag
    11581 atgaatcgaa ccgttgatat tgcctgccgg aaattgcgga tcgatgcgcg aagggtcgaa
    11641 tgcgcgggaa cggatgtcca gcttgagcag gcggtcttta aacagctcga gatagccttg
    11701 cgcggtcagg ctgccttccc cggcggagat gttgacggtg tcgaacacca gtttccgctg
    11761 ttcgtttgcg gggtcgcttg cgatggcgag gctgccgtcc gtgcgtgccg tgccggtgcc
    11821 gagttgccaa gagattttgg gcgaggcggt cgtgccgccg atgccgatgc tgccgtccaa
    11881 cctgcctttg aacgcggttt gcagcacgtc ttccgcgccg acggagttga tgcctatatt
    11941 taaatcaagg atgtcttttt cggtgtcgat tttgcccgac agcctgatgc cgccccgtcc
    12001 gagcagggcg gcggacgtat tgccgatatg caccgtgccg tcctgccgga tgacaaagcc
    12061 gcccaaaacc tgacggacgg ggatgccgtt gcggtcggca aagccggctt tggtgttttc
    12121 caaatcgagc gagccttcca gcgcgatgcc gtctgaaaac gacgggatgg cggtcaggtc
    12181 gaaattcagc ccggcatcgg gcagggaagg cacgaaggcg gacggattga tgttgaatcc
    12241 tttgaccagt acttcttcca atgttttatc caatgattcg gcaaacgggt ggatgacgga
    12301 ttttcccgag aggcggatat tgccgccgtc gatcgtcagt tcggcgcgca catccttcag
    12361 gctgccgctc agccgcgccg tactgtgtat ggtttcgcct tcgaatccgc ctttggtgta
    12421 aatggcggta tcgagggcaa acggtttttt caagccgacc gaggctgacc ccgacgaact
    12481 gctccacggc gtgtcggcgg ccttcaggtc gaggcggtgc cctttacggt cgtaacggta
    12541 tgccgcgttg aggcgttcga gatagacagt ttgtttgtca aaggttttgc ccatgctgat
    12601 tttgcccgtc tcgaagcggt cgagatagac ggcggcgggc aggtctatgc tgtcgggcag
    12661 gccttgaggc gggcgttctt ctttaggcgg agtcggtttg gttacgatgg cgatgtcgcc
    12721 ggcggagatg tcggtgatgt gcaggctgcg gcgcatcagt tcggacggtt tccacgcgaa
    12781 gcggaagcgg ctgattttaa ggtctgcccc ctcggtttct atcgaccagt tgtcgccgtc
    12841 gaagccgtcg agcagtgtgc ctttgaggtt ttgggaggaa atgtttacgc cgaaccagga
    12901 cgggatttgg tacagcccga agcgcaaacc tgcttccgta ccggcgatcc agccgaggaa
    12961 acatactgcc aaaatcagga cagacagcag tgccgccgac agcttcagca gcgggcggcg
    13021 tttttttgcc ggcggggcgg ggcggtgttc agacggcatt ttgcgcgtgc cgttttcggt
    13081 cggatcggta tctgtcggtg cggtatcggt cataatgtct gtttcaaaat ggtttgctgc
    13141 aatgccgtct gaagcggccg tatcggttta gaaacgcgtt cccaagctga tgtgccagcg
    13201 gatttttttg tcgctgtgtc cgtaggcgat gtcgaaggaa aacggcgcga gcgggctgaa
    13261 ccagcgcacg cccagtcccg aaccgtgttt cagcttcata cgtttgaaat tggcggcggc
    13321 atcgcccata tcgtggaata ccgcgccgga cagggtgcgc gtaaacggca gttggtattc
    13381 caagctgccc accaagaggg cgcgttcggg caggaccgat ccgttcggac cggcaagccc
    13441 gatgctgtca agttcgtaac cgcgcacgga agacgcgccg ccgctgcgga acatcagccc
    13501 cgaggggaca tcggcattgt cgcgtgcaac ggtgtaaccc gcttgtccgc gtatgatgaa
    13561 cgtgccgagt tttttgtttt cgggcgtgaa gaaataacct gcgcgggcag aggtgcggat
    13621 tagcgcggtg gaggacagga atgtgcccaa agtcgtcccg attttgccgt cgaggtaatg
    13681 gccgttttcg gggtgcagca cgttgttgag cagctggcgt ttccaagagg cggtcagcat
    13741 cgtggcgtgg ctgttgccca aatcgacatc cgatccgggg attttccggc cttctgcgag
    13801 aaattccgcc cccagcctgg catcgatgcc cgcgcggtcg cgcacatacc agatgccgcc
    13861 ggagaaggcg cgtttttcga ggttttgggt ggtcgaacgg ttgtaggaaa cgttgcttgt
    13921 ccagtagttg ccccgatagt tgcgcggctg gctgatgccg gcggcaagcg tggtttcgta
    13981 tttgtccata tcccagacga ccgagccgat atagcctttg ttgaagaggt tgtaatagtc
    14041 gtaggcgatt ttgccgccca aaccgtattc cgaatcgagg cggatgccgg tttcgagttt
    14101 gtggcgtttg acctcggtta cgctgacttt gacggggacg cggtcgcctt ggaggcggtc
    14161 gaagtcggct tgtacggacg cgccggaata atgcccgttt tgttcgagcg cctgttggaa
    14221 gtcgagcagc aggtcgaggt cgtagggcgt gcccggttgg aagcgcgcca ggccggagac
    14281 ggtttgttcg gggtaacgct gtgtgccggt gatttcaaag tcgccgaagg caatggggcg
    14341 gccgctgtcc acgacgacgt tcaaatcggc ggtggcggta tcggggttga cggccgcccg
    14401 ggtgttgccg agcttggcaa gcgggtagcc tttgcgcgtt accgcgccga ggacggaagt
    14461 tttgctgttt tcccaactgt cctgatcgaa atcgctgcct accggctgct gccagttttc
    14521 cagcgcgttg cggtagtatt cggcgaggtt gccgtctgaa aggatgtcgc cgaggatggc
    14581 gacgccgacg ttggcgattt tggtgcgcgg gcccggtgtg atgtgcaccg tataagctcc
    14641 gtctttttcc gtcaggctga ccttgctgct gaaatagcct ttgctgcgga gcatggtttt
    14701 gacgttgtcc ggtgcttctt cggcaaggaa tcccgtctgt tccttatcca aaacctcttc
    14761 ctgctgctgc gtgatgagcg gcaggtgttc ttcgaccata tctttgattt cactgtcctg
    14821 cgtgtcgatg cggacgggga atttgggttt taatttgact gattcggtgt cggggctttt
    14881 gcttttgaac aatgcgaaac ccgccgcctt gttttcggaa aggtcggcgg caggcgcgta
    14941 tgcgtgcgga aagaaaaata aagccggcag gagcagggag gtcggtttga tcatcatggt
    15001 acgggtgtcg tgcatcggtg tggcggattt cgattctaac actgttcgga cggggcggga
    15061 cgcttcagac ggcataccgc cgccggtatt tcggaggttg cggcccgccg gaaatgtatc
    15121 tgcttgtttt aaggcatttt gtttccaatc cgcatatgga aaacaggctg cgtttcggaa
    15181 tagtgtcgaa aaataggcag gattaaataa atttattctc gttcaataaa ttaaactgtt
    15241 gcgccgaatg ata
//
LOCUS       DAXGCP010000057        15032 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.057, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000057 DAXGCP010000000
VERSION     DAXGCP010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15032
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.057"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            89..1459
                     /locus_tag="ACFJCW_001447"
     CDS             89..1459
                     /locus_tag="ACFJCW_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HFC4151568.1"
                     /translation="MSSPSNTNRQTWSSRLTYILTVAGATVGFGATWRFPYLVGENGG
                     GAYVFLFCIAMLVIGIPMILVENVIGRRKGVNALDAFGGPMNGKPVAKIWKLVGRMGL
                     LGAFGIMAYYMVLGGWVISYIVNIIGGNLNISSPVDGVVTKGFFTEHIENSPWEIAFY
                     TLLFVAVNQWILVKGVIGGIEKTAKYLMPLLFLFLIAMVVRNVTLPGAMEGVAFYLKP
                     DFSKITAELFVFVLGQVFFALSLGFGVMITLSSYLDKNENLVQTAVITAITNTIIAVL
                     AGFMIFPSLFSFGVAPNSGPTLVFQSLPIVFSHMWAGPVFAVIFFSLLLIAALTTSLT
                     IYEVLITTIQEKTKIRRTAAITIVLSVIFVFGNIPSILSYGPWKDVSVFGKNIFDAFD
                     YISGNILFMLTALGSALFVGFVMKDEAKEELLYKGNHTTVNIWFAYVKYLVPLVILLI
                     FVSNLF"
     gene            1692..2348
                     /gene="cmk"
                     /locus_tag="ACFJCW_001448"
     CDS             1692..2348
                     /gene="cmk"
                     /locus_tag="ACFJCW_001448"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HFC4151569.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVEWHDEENVSALAKKLPAVFSGNRILLDGEDVSDGIRTEAIGMGASAVAQWP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGFTFQRILSDIETRDEADRNRKVAPLKQQSDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            2501..4186
                     /gene="rpsA"
                     /locus_tag="ACFJCW_001449"
     CDS             2501..4186
                     /gene="rpsA"
                     /locus_tag="ACFJCW_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HFC4151570.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGNILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QATRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            4197..4511
                     /locus_tag="ACFJCW_001450"
     CDS             4197..4511
                     /locus_tag="ACFJCW_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HFC4151571.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(4707..5114)
                     /locus_tag="ACFJCW_001451"
     CDS             complement(4707..5114)
                     /locus_tag="ACFJCW_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HFC4151572.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLYLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            5264..6374
                     /locus_tag="ACFJCW_001452"
                     /pseudo
     CDS             5264..6374
                     /locus_tag="ACFJCW_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
     gene            6383..7210
                     /gene="fghA"
                     /locus_tag="ACFJCW_001453"
     CDS             6383..7210
                     /gene="fghA"
                     /locus_tag="ACFJCW_001453"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HFC4151573.1"
                     /translation="MKLIEQHQIFGGSQQVWAHHAQTLQCEMKFAVYLPDNRENQPLG
                     VIYWLSGLTCTEQNFITKSSFRRYAAEHQVVVVAPDTGPRGEQVPNGAAYDLGQGAGF
                     YLNATEQPWAANYQMYDYILNELPRLIEEHFPTNGKRSIMGHSMDGHGALVLALRNRE
                     HYQSVSAFSPILSPSLVPWGEKAFTAYLGKDREKWQQYDANSLIQQGYKVQGMRIDQG
                     LEDEFLPTQLRTKDFIETCRAANQPIDVRFHKGYDHSYYFIASFIGEHIAYHAAFLK"
     gene            7740..8891
                     /gene="zapE"
                     /locus_tag="ACFJCW_001454"
     CDS             7740..8891
                     /gene="zapE"
                     /locus_tag="ACFJCW_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HFC4151574.1"
                     /translation="MNNRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKALKSESNPLKSVAAEITKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSGFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRTIWFDF
                     RALCFSPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            8950..9375
                     /gene="ndk"
                     /locus_tag="ACFJCW_001455"
     CDS             8950..9375
                     /gene="ndk"
                     /locus_tag="ACFJCW_001455"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HFC4151575.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGT
                     IRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR"
     gene            9519..10613
                     /gene="rlmN"
                     /locus_tag="ACFJCW_001456"
     CDS             9519..10613
                     /gene="rlmN"
                     /locus_tag="ACFJCW_001456"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HFC4151576.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQASIEIPKLMMSQESSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVSQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGVNDKAQHAY
                     ELIELVKDVPCKFNLIPFNPFPNSGYERSSNENIRIFRDILQQAEFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            10616..11377
                     /gene="pilW"
                     /locus_tag="ACFJCW_001457"
     CDS             10616..11377
                     /gene="pilW"
                     /locus_tag="ACFJCW_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HFC4151577.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSNPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNVQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            11393..12658
                     /gene="ispG"
                     /locus_tag="ACFJCW_001458"
                     /gene_synonym="gcpE"
     CDS             11393..12658
                     /gene="ispG"
                     /locus_tag="ACFJCW_001458"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HFC4151578.1"
                     /translation="MNTLQRRKTHQVLIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLVSSAPKPPEEVMKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVHDLIQVYRE
                     LGSRCVYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGNNIASEFL
                     AIVEEYVKTNYGKNSSKRNKGKVIPIQSL"
     gene            complement(12712..13326)
                     /gene="clpP"
                     /locus_tag="ACFJCW_001459"
     CDS             complement(12712..13326)
                     /gene="clpP"
                     /locus_tag="ACFJCW_001459"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HFC4151579.1"
                     /translation="MSFDNHLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQVLENRASLRL"
     gene            complement(13422..14732)
                     /gene="tig"
                     /locus_tag="ACFJCW_001460"
     CDS             complement(13422..14732)
                     /gene="tig"
                     /locus_tag="ACFJCW_001460"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HFC4151580.1"
                     /translation="MSVTVEILENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGYPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVDREAR
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGAGQMLPEFEAGVVGMKAGESKDVTVNF
                     PEEYHGKDVAGKTAVFTITLNNVSEPTLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALIKAVELKVPVALVNEEAARLANEMKQNFVNQGMTDAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YADTSRLQAPTSLAVESNVVDFVLGKAKVNKKALSFDEVMGAQA"
BASE COUNT         3949 a         3819 c         3549 g         3715 t
ORIGIN      
        1 cactaggcag ttgaaaaaca ttcagtcaat ttctgttaag aatcacgtgt aaaatttccg
       61 ctttatctca atcggacacg gtttcaatat gtcttcccct tcaaatacca accgtcaaac
      121 ctggtccagc cgtttgactt atatccttac cgttgccggc gcgactgtcg gtttcggcgc
      181 gacgtggcgt ttcccgtatt tggtcggtga aaacggcggc ggcgcgtatg tgtttttatt
      241 ctgtatcgcg atgctggtta tcggcatccc gatgattttg gtggaaaacg tcatcggacg
      301 gcgcaaaggc gtgaacgcgc tggatgcgtt cggcggcccg atgaacggca aacctgttgc
      361 caaaatttgg aaactggtcg gccggatggg gctgctcggc gcgttcggca tcatggctta
      421 ttatatggta ctcggtggct gggtaatcag ctatatcgtt aatattattg gaggaaattt
      481 gaatatttcc agccccgtcg acggtgtggt tacaaaaggc ttctttaccg aacacattga
      541 aaacagccct tgggaaattg cgttttatac gctgcttttt gtcgccgtga accaatggat
      601 tttggtcaaa ggcgttatcg gcggcattga aaaaacggcg aaatacctga tgcctctgct
      661 gtttttgttc ctaatcgcga tggtcgtccg caacgttacc cttccgggcg caatggaagg
      721 ggttgctttc tatctgaaac ctgatttcag caagattacc gccgaactgt tcgtcttcgt
      781 tttgggacag gtattttttg ccctgagcct gggtttcggc gtgatgatta ccttatccag
      841 ctatctggat aaaaacgaaa atctggttca gacggcagtt atcacggcaa ttaccaatac
      901 catcatcgct gtacttgcgg gctttatgat tttcccgtcg ctcttcagct tcggcgtcgc
      961 gcccaattcc ggcccgactt tggtgttcca aagtttaccg attgtgttct cacatatgtg
     1021 ggcaggacct gtgttcgccg tcattttctt ctctctgctc ctgattgccg cgttgacaac
     1081 ttcgctgacg atttatgaag tgttgattac gaccattcag gaaaaaacca aaatccgccg
     1141 taccgccgca atcacgattg tattgtccgt catcttcgtt ttcggcaaca tcccgtctat
     1201 tttgagctat ggcccgtgga aagacgtttc cgtgttcggc aaaaatattt tcgatgcctt
     1261 cgactacatc agcggcaaca tcttgtttat gctgaccgcg ctcggttccg cattgtttgt
     1321 cggttttgtg atgaaggacg aagcgaagga agaattgctt tataaaggca accatacgac
     1381 ggtcaatatt tggtttgcct atgtgaaata ccttgtgccg ctggtgattc tgctgatttt
     1441 cgtcagcaac ctgttctaat ccgcagcaat caatgccgtc tgaaggtcat acctctttca
     1501 gacggcattg cattgatgcc cgccacgccg gaatccgaac cggcttgccg gcttctgtcg
     1561 gacgctttcc gggcaggcgg cgttccgtct gcttagacaa tcgtccttta aaacaggtag
     1621 aatccgcccc aacgggaaac acacccttca gacggcaaaa cccatacccc aaaccatcag
     1681 gaatccccct tatgaacaga caaaaagtca tcgccatcga cggtccgggc gcatcgggca
     1741 aaggcacggt cgccgcccgc gttgccgccg cattgggata cgattatctc gataccggcg
     1801 cgctctaccg cctgaccgcc ctatatgcac aaaaacaagg cgtggaatgg cacgatgaag
     1861 aaaacgtttc cgcacttgcc aaaaaactgc ccgccgtatt ttcaggcaac cgcatcctac
     1921 ttgatggcga agacgtttca gacggcatcc ggacagaagc catcggtatg ggcgcatccg
     1981 cagttgcgca atggcccaaa gtccgcgccg cactgctgca acgccaacgc gattttctga
     2041 ccgaaaaagg actggttgcc gacggacggg acaccggatc ggtcgtcttc ccccaagccg
     2101 aactcaaaat ttttctgaca gccgaatcta aaatccgtgc cgaacgccgc gccaaacaaa
     2161 tcggcattcc ctgcgaaggt ttcacattcc agcgcatcct gtccgacatc gagaccagag
     2221 acgaagcaga ccgaaaccgc aaggttgccc ccctgaaaca acagtccgat gccctgcttt
     2281 tggatacgag ccgcctaact atagaagaaa ctgtaaaaaa agtgcttgat tggtatcgta
     2341 aagtttaaat tttcaggtat aatcgcccgc attgcgcttc agacagcatg aatttccatg
     2401 tgccgtctga aaccttattt acccgcctgc cgtgccaagg actgcagaca cccaccaacc
     2461 caacccgcac cccttggcgg tgtaccgaaa agagttatat atgtctatgg aaaattttgc
     2521 tcagctgttg gaagaaagct ttaccctgca agaaatgaac ccgggtgagg taattaccgc
     2581 tgaagtagtg gcaatcgacc aaaacttcgt taccgtaaac gcaggtctga aatcagaatc
     2641 cctgatcgat gtagctgaat tcaaaaacgc tcaaggcgaa attgaagtta aagtcggcga
     2701 cttcgttacc gttaccatcg aatccgtcga aaacggcttc ggcgaaacca aactgtcccg
     2761 cgaaaaagcc aaacgcgcag ccgattggat cgctttggaa gaagccatgg aaaacggcaa
     2821 catcctgtcc ggcatcatca acggtaaagt caaaggcggc ctgaccgtta tgatcagcag
     2881 catccgcgca ttcctgccgg gttctttggt cgacgtacgt cccgttaaag acacttccca
     2941 ttttgaaggc aaagagatcg aattcaaagt gatcaaactg gacaaaaaac gcaacaacgt
     3001 cgttgtttcc cgccgcgccg ttttggaagc cactttgggt gaagaacgca aagccctgct
     3061 ggaaaacctg caagaaggct ccgtcatcaa aggcatcgtc aaaaatatca ccgactacgg
     3121 cgcattcgtt gacctgggcg gcatcgacgg cctgctgcac atcaccgatt tggcatggcg
     3181 tcgcgtgaaa cacccgagcg aagtcttgga agtcggtcag gaagttgaag ccaaagtatt
     3241 gaaattcgac caagaaaaac aacgtgtttc cttgggtatg aaacaactgg gcgaagatcc
     3301 ttggagcggt ctgacccgcc gttatccgca agccacccgc ctgttcggca aagtatccaa
     3361 cctgaccgac tacggcgcat tcgtcgaaat cgaacaaggc atcgaaggtt tggtacacgt
     3421 ctccgaaatg gactggacca acaaaaacgt acacccgagc aaagtcgtac aactgggtga
     3481 cgaagtcgaa gtcatgattt tggaaatcga cgaaggccgc cgccgtatct ctttgggtat
     3541 gaaacaatgc caagccaatc cttgggaaga atttgccgcc aaccacaaca aaggagacaa
     3601 aatctccggt gcggttaaat ccattaccga tttcggcgta ttcgtcggcc tgcccggcgg
     3661 catcgacggt ctggttcacc tgtccgacct gtcttggacc gaatccggcg aagaagccgt
     3721 acgcaaatac aaaaaaggag aagaagtcga agccgtcgta ttggcaatcg atgtggaaaa
     3781 agaacgcatc tccttgggta tcaaacaact ggaaggcgat cctttcggca acttcatcag
     3841 cgtgaacgac aaaggttctt tggttaaagg ttccgtgaaa tctgttgacg ccaaaggcgc
     3901 tgttatcgcc ctgtctgacg aagtagaagg ctacctgcct gcttccgaat ttgcagccga
     3961 ccgcgttgaa gacttgacca ccaaactgaa agaaggcgac gaagttgaag ccgtcatcgt
     4021 taccgttgac cgcaaaaacc gcagcatcaa actttccgtt aaagccaaag atgccaaaga
     4081 aagccgcgaa gcactgaact ccgtcaatgc cgccgccaat gcgaatgccg gtaccaccag
     4141 cttgggcgac ctgctgaaag ccaaactctc cggcgaacaa gaataaggtt gcagacatga
     4201 caaagtctga gttaatggtt cgcttggcag aagtatttgc cgccaaaaac ggcacgcatc
     4261 ttctggcaaa agacgtagag tacagcgtaa aagtcttggt tgacaccatg acccgatcgc
     4321 ttgcccgagg tcaacgcatc gaaatccgcg gtttcggcag cttcgatttg aaccatcgtc
     4381 ctgcccgcat cggtcgcaat cccaaaaccg gcgagcgcgt ggaagtacct gaaaaacatg
     4441 taccccactt caagcctggt aaagaattgc gcgagcgggt cgacttggct ttaaaagaaa
     4501 atgccaatta aaccttagca tcaaaacgcc gctggtacgc ggcgtttttt ctttggttta
     4561 acttcatccg ctgcttcaat accttaagcc aagcaagcaa cggattagag cgtggatttt
     4621 ttaccattgc ttacaatccg ctttttaaac aacaaattgt tgatttctat tacgaacagg
     4681 acaaaatcct gcttattgca ctaaaactaa gccgtttcag gaatttgcgg caaatttaca
     4741 gcttttaccg agcctaatgc tttcgctttt tggtaaaacg ccaatttgta ttcaagcaaa
     4801 tctaaataac gttttaattc ggcaatttga cacttcacat tttctatttg attttcaaac
     4861 aaggaaaggc gttcttcaat ggtatcgtcg ccaatgacgg tacattccgc aaagcgtttg
     4921 atgtctttta agctcattcc cgtatttttc aagcattgca ataagtacaa ccattgcaaa
     4981 tcgttatcgg taaaacaacg gttaccgtat tcatcacgtc cgatattagg caacaagcct
     5041 tctttgtcgt aaaagcgtaa agtgtgggcg gagatgccta ttttttcggc agctttggca
     5101 gtggtataag tcattttccc tccctctaaa caaaaaacgg taaaaaaaca cttgccttag
     5161 agtgaactct aaaatgtaaa ctgttgctat gttgctcagg caaggctatt ttgttaatga
     5221 attaagagga aagacaatgg aaatgaaaca aaccgattca accatcaaat ctcgtgcggc
     5281 ggtggcattc gcccctaacc aacccttaca aattgtggaa atcgacgtgg aaatgccgcg
     5341 taaagacgag gtgttaattc gtaacaccca cactggcgtg tgccatactg atgcatttac
     5401 cttatcagga agcgatcctg aaggcgtatt ccctgtggtg cttggacacg aaggtgcggg
     5461 tgtggtcgtt gctgtgggcg agggtgtgtc aagcgtaaaa ccgggtaatc acgtcattcc
     5521 gctttacacc gcagaatgtg gcaaatgtga gttttgcctc tcgggtaaaa ccaatttatg
     5581 cgtctcagtg cgtgatacac aaggtaaagg cttaatgcca gacggcacga cgcgtttttc
     5641 ttatcaaggt cagccgattt atcactatat gggctgttcg actttcagtg aatattctgt
     5701 tgttgccgaa gtttcactgg cgaaaatcaa cccgaaagcc aaccacgaac aagtatgttt
     5761 gctcggctgc ggcgttacca ctggtattgg tgcggtacat aacacggcaa aagtacaaga
     5821 aggcgattct gttgccgtgt ttggcttggg agcgattggt ttggctgtgg tgcaaggtgc
     5881 gcgtcaagcc aaagccggtc gcattatcgc cattgatacc aatcctgcaa aattcgagtt
     5941 ggcaaaacag tgttggtgca actgactgtt tgagcccgaa agattacgat aaaccaatca
     6001 aagatgtgtt gttagacatc aacaaatggg gcattgacca cacctttgaa tgtatcggca
     6061 atgtaaacgt aatgcgtcag gcattagaaa gtgcacaccg aggttgggga caatccatca
     6121 tcatcggcgt agcggatgca ggacaagaaa tttcaacgcg tccgttccaa tcggtaacag
     6181 gccgtgtttg gaaaggctcg gcatttggtg gtgttaaagg ccgctccgag cttccgaaaa
     6241 tggtggagga ttcaatgaaa ggcgatatcc aattagaacc atttgtgacc catgcaatga
     6301 cccttgatca aatcaatgaa gcctttgagt taatgcacga aggtaaatcg atccgcgctg
     6361 ttattcatta ctaaggtcca cgatgaaact gattgaacaa catcaaattt ttggtggttc
     6421 gcaacaagtt tgggcgcatc atgcccaaac gcttcaatgc gaaatgaaat ttgccgtcta
     6481 tttgccggat aatcgggaaa atcaaccgct tggtgtgatt tattggcttt ccggcttgac
     6541 gtgtacggaa caaaatttca ttaccaaatc gagcttccgg cgttatgcgg cagaacatca
     6601 agtggttgtg gtcgcccccg ataccggccc tcgcggagag caagtgccga acggtgccgc
     6661 ttatgattta ggacaggggg caggctttta tttgaatgcg accgaacagc cttgggcggc
     6721 gaattatcaa atgtatgatt acattttgaa cgagttgccc cgtctgattg aggagcattt
     6781 tcctaccaac ggcaaacgtt ccattatggg gcattcgatg gacggacacg gcgcattggt
     6841 attggcacta cggaatcggg aacattatca aagtgtttct gccttttcgc ctattttatc
     6901 gccaagcctc gtaccgtggg gagaaaaagc ctttactgct tatttaggga aagaccgtga
     6961 aaaatggcag caatatgatg ctaactcact cattcaacaa ggctataaag tgcaaggtat
     7021 gcgtatcgat cagggcttgg aagatgagtt tttgccgaca caattgcgta ccaaagattt
     7081 tatcgaaacc tgtcgtgcgg caaatcagcc aatcgatgtg cgtttccata aaggatacga
     7141 tcacagctat tacttcatcg ccagttttat tggtgagcat atcgcttatc acgccgcatt
     7201 tttgaagtaa gtcaaagagc ggtcagtttt caaagcagtt tggaatagcc ggcacgaggg
     7261 cggtaagaag tgccggcata aacgtatgcc gcctgaaccg gaaggagccg gccctacgga
     7321 ttaccaaacc ctgcccttga tttgattagt atgattttta agcttaaacc ctgattgatc
     7381 aaacattaaa atcgcccgta tttcctactt cactttcggg cttcgtatta ttcgttgccg
     7441 aatttgcata agcaacctgt tcctgttgtg ttttcgcccc ctccaagctg acggtggcgt
     7501 aacagcttcg cgattcacca tctgtttcat ttgtcctcct tcaatattaa aacgcagcct
     7561 gaaataaaag gcattttggc tcatatctgc accatattaa aacgccgcct ttgcttatac
     7621 cccctttgtg cgcgtcatta ttcttttcca cgggaaacgc caagtttgaa ggaaatcatt
     7681 tataatacca gcggtaagca ttttctttct tagccgcaag aagtataaca aggttaaata
     7741 tgaataatag agaccaactt tttaaagccc cgccgtttga aaaccacagc ccgctgacct
     7801 ggtatcaggc tgcctcacaa ctgcccaact tcatccgcga cgacgcacag gcggccgcca
     7861 tcgaacacct tgaccggctt tggaccgaat tgatgatgtt caaacgcaaa agaaaccgtt
     7921 ttttaggcag gagtttgcgt tccccgcaag ttcccaaagg gctttatttc tatggcggag
     7981 tcggacgcgg caagagcttt ctgatggacg cttttttcgg ctgcctccct taccgccgca
     8041 aacgccgcgt ccactttcat gcctttatgg cggaaatcca ccggcggctg aaagccctga
     8101 aaagcgaaag caacccgttg aaatccgttg ccgccgagat taccaaagaa acccgagtat
     8161 tgtgttttga cgaatttcat gtcagcgata ttgcggatgc aatgatttta ggccgtctgc
     8221 tggaaaacct gcttaacgag ggcgttgttt tggtggcgac ttcaaactac gcgccttccg
     8281 aactctaccc gcaaggtcaa aaccggagcg gttttcttcc cacaatcgcg ctcatcgagt
     8341 ccagtctgac cgtcttaaac gttgacggag gggaagacta ccggctgcgt accctccgcc
     8401 ccgccgagat tttctttacg cctgccaatg aagaaaatga ggcaaaactg gcaaaactgt
     8461 tcaaagaaat gacaggcatt accgatttga accccggcat cagcaccatc cacggccggg
     8521 aaattcccca caaagccgag tccggtcgta ccatatggtt tgatttccgc gcactgtgct
     8581 tcagtccccg ctcacagtcc gactatctgt atttggccga acattatgaa atggttttta
     8641 tttcaggttt ggaacaactc tcaccgcaag aaaaggcgga ggcgcgacgg ctgacttggc
     8701 tgattgacgt actctacgat ttccgggtca aactgtgtgc caccggcgcg gtagatgtca
     8761 accatatcta cacggaaggc gattttgccg aagaatttac ccgcaccgcc agccggatgg
     8821 tcgaaatgca gtccgaagtt tatttggaac agccgcacct gaccttatct cccaaggctt
     8881 caggcggata agttattttt ttggtagaat accgatttga ttcttcttaa gtaaaaataa
     8941 ggatatagca tggcgattga acgtaccata tccatcatca aacccgatgc cgtcggcaaa
     9001 aacgttatcg gcaaaatata cagccgcttt gaggagaacg gtctgaaaat cgttgccgcc
     9061 aaaatgaagc agcttaccct caaagaagcc caagaatttt atgcggttca taaagaccgc
     9121 cccttctatg ccggattggt tgaatttatg accggcggtc cggttatgat tcaagtactg
     9181 gaaggcgaaa acgccgttct gaaaaaccgc gaactgatgg gggcgaccaa tcccaccgaa
     9241 gccgcagaag gcacgatacg cgcggacttt gccacttcgg tcagcattaa cgccgtacac
     9301 ggttccgaca gtgtggaaaa tgccgctttg gaaattgcct actttttcag ccaaaccgaa
     9361 atctgccccc gttgatacaa tacaccgccc aattcctatt cagacggcat aaaatatatc
     9421 catgccgtct gaaaactctg ttgcaaaaga cttcaaatca aacttgcctg ccctgcaatt
     9481 ttttatttga agccttaatt taagaaaaac acaaatacat gaaaaccaat ctgctcaact
     9541 acgaccttca agggctaacc cgacattttg ccgatatggg tgaaaaacca ttccgcgcca
     9601 aacaggttat gcgttggatg caccaatccg gcgcgcaaaa ttttgacgaa atgaccgatt
     9661 tggcaaaatc gttgcgccat aaactgaacg aacaggcaag catcgaaatt cccaagctga
     9721 tgatgtccca agaatcttca gacggcactc gaaaatggct tttggatgtc ggtacgggga
     9781 acggcgtgga aaccgtcttc atccccgaat cggatcgcgg cacgctctgc atttcctcgc
     9841 aagtcggctg cgctttggaa tgtacatttt gttcgaccgg ccggcagggc ttcaaccgca
     9901 atttaaccgc tgccgaaatc atcggacagt tgtggtgggc aaacaaagcg atgggcgtta
     9961 caccgaaaaa cgagcgtgtg atttccaacg tcgtcatgat gggcatgggc gagccgatgg
    10021 cgaacttcga caatgtcgtt accgccttga gcatcatgct ggacgaccac ggctacggtt
    10081 tgagccgccg ccgcgtaacc gtttccactt cgggtatggt ttcccaaatg gacaggttgc
    10141 gcgatgtcat gccggtggcc ttggcggttt ccctccacgc ttccaatgac gaagtccgca
    10201 accaaatcgt accgttgaac aaaaaatatc ccttgaaaga attgatggcc gcatgccaac
    10261 gctatctggt caaagcgccc agggatttca tcactttcga gtatgtgatg ctggacggtg
    10321 tcaacgataa ggcacaacat gcatacgaac ttattgaact ggtcaaagat gttccctgca
    10381 aattcaattt aatcccgttt aatcctttcc ctaattcggg atatgaacgt tcaagtaacg
    10441 aaaacatccg tattttcaga gatatcctgc aacaagccga atttgtcgtt accgttcgaa
    10501 aaactcgtgg cgacgatatc gatgccgcct gcggacagtt ggcaggtcag gttcaggata
    10561 aaacgcgccg ccaacaaaaa tggcagcaga ttttaatcgg acaacagggg taattatgcc
    10621 ttttaagcca tccaaacgaa tctctttatt acttgttctt gccttgggcg cgtgcagcac
    10681 ttcctaccgc ccctcgcggg cagaaaaagc caatcaggtt tccaatatca aaacccagtt
    10741 ggcgatggaa tatatgcgcg gtcaggacta ccgtcaggca acggcaagta ttgaagatgc
    10801 cttgaaatcg aaccctaaaa acgagcttgc ctggctggtc cgtgccgaaa tctatcaata
    10861 cctgaaagtt aacgacaagg cgcaggaaag tttccggcaa gccctctcca tcaaacccga
    10921 cagtgccgaa atcaacaaca actacggctg gttcctgtgc ggcaggctca accgccctgc
    10981 cgaatctatg gcatatttcg acaaagccct ggccgacccc acctacccga ccccttatat
    11041 tgccaacctg aataaaggta tatgcagcgc aaaacagggg caattcggat tggcggaagc
    11101 ctatttgaaa cgttccctcg ccgcccagcc gcagttccca cccgcattta aagaactggc
    11161 gcgcaccaaa atgctggccg ggcagttggg cgatgccgat tactacttta aaaaatacca
    11221 aagcagggta gaagtccttc aggccgatga tttgctgcta ggctggaaaa ttgccaaagc
    11281 cctcggcaac gtgcaggcgg catacgaata tgaagcacaa ttgcaggcaa atttccccta
    11341 ctcggaagaa ttgcaaaccg tcctcaccgg tcaataaaca gattcaaacc atatgaacac
    11401 actccaacgc cgcaagacgc atcaagtcct catcgatcat atcaccgtcg gttcagaagc
    11461 acccgtcgtt atccaatcta tgaccaacac cgacactgcc gatgcaaaag ccaccgcatt
    11521 gcagattaag gaattgagcg atgccggctc ggaaatggtg cggattaccg tcaacagccc
    11581 cgaagccgcg tccaaagttg ccgaaatccg ccgccgcttg gacgatatgg gctatgccac
    11641 accactgatt ggcgatttcc attttaacgg cgaacgcctg ttggcggaat ttcccgaatg
    11701 cggcaaagca ttgtccaaat accgcatcaa tcccggcaat gtcggcaaag gcgtaaaagg
    11761 cgatgaaaaa tttgccttta tgattcggac tgctgctgaa aacgataaag ccgtccgtat
    11821 cggcgtaaac tggggttctt tggatcagag cctcgccaaa cgtatgatgg atgccaacct
    11881 cgtttcttcc gcgccgaaac cgcccgaaga agtgatgaag gaagcactga ttgtctccgc
    11941 tttggaatct gccgaaaaag ccgttctatt gggactgccc gaagacaaaa tcatcctgtc
    12001 gtgcaaagtc agcgcagttc atgatttgat tcaggtttac cgcgaactgg gcagccgttg
    12061 cgtctatccg ctgcatttgg gtttgaccga agccggtatg ggcagcaaag gcattgtcgc
    12121 atcaacggcg gcattatctg ttttgcttca agaaggaatt ggcgacacca tccgcatttc
    12181 actcactccg gaaccgggca gcccgcgtac tcaggaggtc gtcgtcgggc aagagatttt
    12241 acagactatg ggtttgcgct cgtttacgcc gatggttacc gcctgcccgg gatgcgggcg
    12301 taccaccagt accgtatttc aagagctggc acaagatgtt caaaattacc tgcgccaaaa
    12361 aatgtctata tggcgtaccc tttatcccgg ggttgaatcc ctgaacgttg ccgtaatggg
    12421 ctgcgttgtc aatggccccg gagaaagcaa attggccgac atcggaatca gccttcccgg
    12481 tacgggggaa acacccgtcg cacctgttta tgtagatggg gagcgcaaag tcacactgaa
    12541 aggtaataat attgcaagcg aattcctagc tattgtagag gaatatgtta aaaccaatta
    12601 tggcaaaaac agttctaaac gcaataaagg aaaagtcatc ccgatacagt ctctataaaa
    12661 caaatgccgt ctgaacgttt cagacggcat ttgtttctct cagatttctt attaaagccg
    12721 caaagaagcg cggttttcca aaacttggtc gatcaaacca tattcttttg cttcttcggc
    12781 agacatgaaa ttatcacggt cggtgtcgcg ctccaaatct gccaaatcgc ggccgcaatg
    12841 tttcgccatc aggcggttga gtttttcttt gattttcaac aactcgcgtg cgtggatttc
    12901 aatgtcggat gcctgaccgc ccaagccgcc gctgattaaa ggctggtgaa tcataatccg
    12961 gctgttgggc agggcgaaac gtttgccttt ctcgcctgcc gacaataaga acgcgcccat
    13021 acttgccgcc tgccccaagc acaaagtcga tacatcgggc ttgatgaaat tcatcgtgtc
    13081 gtaaatcgac ataccggccg ttaccgagcc gccgggggaa ttgatgtaga agaaaatatc
    13141 cttatccgga ttctcacttt ccaaaaacaa cagttgggcg accaccagat tagcagactc
    13201 atcggttacc gggccaacca gaaatacgat gcgctctttc aaaagccggg aatagatatc
    13261 gaatgcacgc tcaccgcgac cgctctgctc gataacggta gggacaagat ggttatcaaa
    13321 agacatttcg tctcctttca tgatggaaaa gcaccaaagc gggctttaaa aacggcttcg
    13381 gtgctttcaa aaactgcctt cagacagcat tttcagaaca atcaggcttg cgcgcccatc
    13441 acttcgtcaa aagacaaagc ttttttgttt actttggctt tgcccaaaac gaaatcaaca
    13501 acgttgcttt ctactgccaa agaagtcggg gcttgcaggc gggaagtatc tgcgtagtac
    13561 cagtcaatca cttcttgagg atcttcgtag ctttctgcga agttggcgac aacggctttg
    13621 atttgctctt cagtcggttc cagtttgttt tcgtcaacca gtttggccaa aatcagaccc
    13681 aaagatacgc gacgttcggc ttgttctttg aacatatcca aaggcaaatc caagttcgcg
    13741 gcatcggtca taccttggtt aacgaagttt tgtttcattt cgtttgccag gcgggcggct
    13801 tcttcattga ccaaagcaac cggaactttc aactctacgg ctttaatcag cgcgttcatt
    13861 acggattctt tggtttgttc gttcacgcgg cgttccactt cgcggcttac gtttttcttc
    13921 acttcttcac gcattttggc aacatcgcca tccgcaatac ccaaggcttt tgcaaaatct
    13981 gcatcgactt caggcagagt gggctcggaa acattgttca gcgtaatggt gaacacggca
    14041 gttttaccgg caacatcttt gccgtggtat tcttcaggga agttgacggt aacgtcttta
    14101 ctttcgcccg ctttcatgcc gactacgccg gcttcaaatt caggcagcat ttgacctgcg
    14161 cccaatacga aggcgtagtt tttggatgcg ccgccggcaa aaggttcgcc gtcgattttg
    14221 ccttcaaagt cgatgatgac gcggtcgccg tttcgggctt cgcggtcaac atggttgaag
    14281 cgggtacgtt gtttacgcag gatttctaca gtttggtcga cttcggcatc gccgacggaa
    14341 gcggttactt tttcgacctc ttgtgcagac aaatcgccga taacgacttc ggggaacact
    14401 tcaaaaatgg cggcaacttt gaaagactct ttatcgtctt gttcttcaac gccttcaaaa
    14461 cgtggatagc ctgccacttt caactcttgg gcaacggcaa catcgtagaa gcggcgttgc
    14521 accagctcgt tgatcacgtc gttttgcgcg ctcgcaccgt acatttgggc aatcattttt
    14581 aaaggtgctt tacccggacg gaaaccgtcg atttttgcac ggcgttgggt ttgtttcagt
    14641 tttttatcgg tttctgcgtt gatttcggac caaggcaggg acaacactac tttgcgttcc
    14701 agattttcta aaatttcaac agttacgctc atcataagcc cttaaatttg ttgtgttgat
    14761 aaaatgataa accttcttcc ctgcatgggg aagcaaacag cgcaacggta cgatatttga
    14821 accgcattgc cgcaaagggg aaattttagc tggcaagtat atcacaatgt ttcgcctgaa
    14881 acataatatg ccgagacctt tgcaaaattc ccctaaaatc ccctaaattc ccaccaaggc
    14941 atttagggga tttcccatga gcaccttctt ccggcaaacc gcacaagcca tgactgccaa
    15001 acacatcggc cgcttcccgc tatcggagtt gg
//
LOCUS       DAXGCP010000058        14331 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.058, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000058 DAXGCP010000000
VERSION     DAXGCP010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14331
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.058"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            188..412
                     /locus_tag="ACFJCW_001461"
     CDS             188..412
                     /locus_tag="ACFJCW_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151581.1"
                     /translation="MMKNKYILIKAAIGITAISIFYLLTQGSIGKTEEPSYFLMFMFL
                     NSLWFEENKTVMAAVTAMIAAHFIFVALSD"
     gene            468..1124
                     /locus_tag="ACFJCW_001462"
     CDS             468..1124
                     /locus_tag="ACFJCW_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC4151582.1"
                     /translation="MEQKRRFAASLLLAAALPLCAHSFPFAEENPIAYGKVKIQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQKLTEEEVLEKLGKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGVDGNTVLLADPSPGHVSM
                     SRAQFLEAWQTREGNLAGKILAVVPKKAEAISNKLFFTHHPKRQTEFAVGQIRQGRAE
                     "
     gene            1252..2547
                     /gene="hisS"
                     /locus_tag="ACFJCW_001463"
     CDS             1252..2547
                     /gene="hisS"
                     /locus_tag="ACFJCW_001463"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HFC4151583.1"
                     /translation="MAQKIQSVKGMNDLLPVGQKDFKLTAVFWQAFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEAQLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENSRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGEGADLQVMKYAQALRAQGFNVIQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELADGTVTLKDMNGAHGQQTVSATDLTDTLQQWKNA"
     gene            2548..3177
                     /locus_tag="ACFJCW_001464"
     CDS             2548..3177
                     /locus_tag="ACFJCW_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HFC4151584.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELSKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFA
                     PLLMETKGDVYAAQEKSQEALKNYGQALEKMPQDSVGRELLQMKLDSLK"
     gene            3327..4784
                     /gene="der"
                     /locus_tag="ACFJCW_001465"
     CDS             3327..4784
                     /gene="der"
                     /locus_tag="ACFJCW_001465"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HFC4151585.1"
                     /translation="MKPTIALIGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYFVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDRRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGDRAVLAAEFYELALGEPHVISGAHGDGVYYLIEEIL
                     ENFPEPEAEEADAKHPVFAVIGRPNVGKSTLVNAILGEKRVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGINEERREQVKRDISRKLYFLDFAKFHFISALKERGI
                     DGLFESIQAAYNAAMIKMPTPKITRVLQTAVGRQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREGRKEEKNRFKKKTKVSVKKQFSK"
     gene            4815..5714
                     /locus_tag="ACFJCW_001466"
     CDS             4815..5714
                     /locus_tag="ACFJCW_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HFC4151586.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     TAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTRLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            5766..6183
                     /locus_tag="ACFJCW_001467"
                     /pseudo
     CDS             5766..6183
                     /locus_tag="ACFJCW_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6250..6816
                     /gene="dcd"
                     /locus_tag="ACFJCW_001468"
     CDS             6250..6816
                     /gene="dcd"
                     /locus_tag="ACFJCW_001468"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HFC4151587.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGQRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEVCETSYKDRNGKYMGQTGVTLPKA"
     gene            complement(6882..7586)
                     /locus_tag="ACFJCW_001469"
     CDS             complement(6882..7586)
                     /locus_tag="ACFJCW_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HFC4151588.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGIEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNNFTRKSKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKAEGRDFDALNRFIADVQTDASLEDTDFSVSRERRNEVIDQVSKDAVLRFK
                     ARAEKLAGVLGASGYKIVKLNFGQIGSHIAGDGAVRAKMLRAMPMAASVNMKGTDSAA
                     PGVEEISISINGTVQF"
     gene            7730..8925
                     /locus_tag="ACFJCW_001470"
                     /pseudo
     CDS             7730..8925
                     /locus_tag="ACFJCW_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            8951..9904
                     /locus_tag="ACFJCW_001471"
     CDS             8951..9904
                     /locus_tag="ACFJCW_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HFC4151589.1"
                     /translation="MTHTVHLHLEETDNPTLQRLCGSFDSNLDSLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDSIIRLAAVETQTEDAGHQEKNHEHAYYF
                     RTKRGSIGGRTPRQNGYIRALLDHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEITPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHGVAGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(10009..10332)
                     /locus_tag="ACFJCW_001472"
     CDS             complement(10009..10332)
                     /locus_tag="ACFJCW_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151590.1"
                     /translation="MKKCILGILTACAAMPAFADRISDLEARLAQLEHRVAVLESGGN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCGDEAIR
                     CRKFD"
     gene            complement(10505..11863)
                     /locus_tag="ACFJCW_001473"
     CDS             complement(10505..11863)
                     /locus_tag="ACFJCW_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HFC4151591.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTVIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGNAAERYQEDPVRILRAIRLSGKLGFELSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDIHPLLNALRVSDGIAGKM
                     TALALKNTDERLRADKSVSVGFVLAALMWPELDRHWKSNLQQGLKPTPALSDAINTMR
                     ETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAETG
                     NADRALAEWWTAFQTASAEQRTEMTKNEAAARHEKNEGQEKKRRRRRRKPKPKVVGTD
                     WE"
     gene            complement(12221..13921)
                     /gene="recJ"
                     /locus_tag="ACFJCW_001474"
     CDS             complement(12221..13921)
                     /gene="recJ"
                     /locus_tag="ACFJCW_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HFC4151592.1"
                     /translation="MSVKIQTRPVNTDVFNHLLAAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQSLTNCEAAAGRLADAVERKEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
                     HHLPADTVPDCIIVNPNQKGCGFPSKSLAGVGVIFYVLTALRAELRRRNYFSDGIKEP
                     NLGGLLDLVALGTVADVVPLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDSEAQELAARLNNLNIERREIEQSM
                     LRDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVRE
                     MVCEDDLSQTYITDGSLPACDITLEQAQNLACHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKAWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRDNLELQLYIDYWEAA
                     "
     gene            complement(13990..14331)
                     /locus_tag="ACFJCW_001475"
                     /pseudo
     CDS             complement(13990..14331)
                     /locus_tag="ACFJCW_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         3599 a         4001 c         3556 g         3175 t
ORIGIN      
        1 agtacaaata gtacggaacc gattcactcg gtgcttcagc accttagaga atcgttctct
       61 ttgagctaag gcgaggtaat gccgtaccgg tttaaattta atccactata tatttatccg
      121 atatatcaac atctctctat cttattccga attttattgt tgaaacttgc atgaaaaacc
      181 atacaagatg atgaagaaca aatatatttt aataaaagca gcaatcggca taaccgccat
      241 atccatattt tatcttctga ctcaaggaag catcggcaaa actgaagaac catcatattt
      301 cttgatgttc atgtttctca actcgctttg gtttgaagaa aataaaacag ttatggctgc
      361 cgttacggca atgattgccg cccactttat atttgtcgca ctatccgatt aataagcaaa
      421 caaaaaggct gcttggaaat ttcaggcagc ctttcaggag gattttgatg gaacaaaaaa
      481 ggcggtttgc cgcttccctg ctcctcgccg ccgccctgcc gctttgtgca cattcttttc
      541 cctttgcgga agaaaacccc atagcctacg gcaaagtcaa aatacaaagc tggaaagcgc
      601 ggcgggattt caatattgta aagcaggatt tggatttttc ctgcggggcg gcttcggtgg
      661 cgacgctttt gaacaatttt tacgggcaaa agctgacgga agaagaagtg ttggaaaaac
      721 tgggtaagga acagatgcgc gcgtcgtttg aggatatgcg gcgcattatg cctgatttgg
      781 gttttgaggc gaagggctat gccctgtctt tcgagcagct cgcgcagttg aaaatccccg
      841 tcatcgtgta tctgaaatac cgcaaagacg accatttttc ggtattgcgc ggagtggatg
      901 gcaatacggt tttgcttgcc gacccgtcgc cgggtcatgt ttcgatgagc agggcgcagt
      961 ttttggaggc ttggcaaacc cgtgagggaa atttggcagg caagattttg gcggtcgtgc
     1021 cgaaaaaagc ggaggcgatt tcaaataaat tgtttttcac acatcatccc aagcggcaga
     1081 cggagtttgc agtcggacaa atcaggcaag ggcgcgcaga gtaagtcaaa tgccgtctga
     1141 aaactgtttc agacggcatt tttacccgtc cgcaaaccat ctccatcctc acaagccctt
     1201 aaaaatccgc tataatcgcc cgcaatttga tttcagcacc ccctttttga aatggcacaa
     1261 aaaatccaat ccgtcaaagg catgaacgac cttctgcctg tcgggcaaaa agatttcaaa
     1321 ctcacggctg tgttttggca ggcgtttgag gatacggtaa accgttggac gcgagcttac
     1381 ggttatcagc aaatccgtac gccgattgtc gagcaaaccg gtttgtttgt ccgctccatc
     1441 ggcgaggaaa ccgatgtagt cggcaaggaa atgtacacct tctccgattc aaacgattct
     1501 ttgagtttga gcctgcgtcc cgaaggtacg gcctcttgtc tgcgtgcggt ggtcgaacac
     1561 aaccttctgt acaacagccc gcaaaagctg tggtatatgg ggccgatgtt ccgccgcgag
     1621 cgtccgcaaa aaggacgcta ccgccaattt catcaggtcg gtatcgaggc tttgggtttt
     1681 gaagggccgg atattgatgc ggaaatcatc gcaatgtctg ccgacttgtg ggaaaaattg
     1741 ggtattcgcg aatacctgac tttggaaatc aacagcttgg gcaaccgtga ggaacgcgcg
     1801 gcacaccgtg cggcattggt tgaatatctg acccgctatg aagcgcaact ggacgaagac
     1861 agcaaacgcc gtctgaaaac caatcctttg cgcgttttgg atacgaaaaa ccctgatttg
     1921 caggaaatct gcaatgccgc gccgcgtttg gtagattact tgggcgaggc ttcgcaaaac
     1981 cactatgcac gcttcaaggc gatgttggac ggtttgggta ttcaatatat tgaaaattcg
     2041 cgcttggttc gcggtttgga ttattacaat cagacggttt ttgagtggac gaccgacaaa
     2101 ctcggcgcgc aggcgactgt gtgcggcggc ggacgttacg acggtttgat tgaagaactc
     2161 ggcggcaagc ctgcgccgtc catcggcttt gcgatgggca tcgaacggct gctgcttttg
     2221 gtgagcgaat acggttcgct ggaagtgaac gccgcgcctg atgtctatgc aatgcaccaa
     2281 ggcgaagggg cggacttgca ggtgatgaaa tacgcacaag ccttgcgcgc gcaaggtttc
     2341 aatgtaatac agcattccgg ctatcaaagc ctgaaggcgc aaatgaaaaa agccgacaac
     2401 agcggcgcgc gctttgccct gattgtcgcg caagacgaac tggcggacgg taccgttacg
     2461 ctcaaagaca tgaacggcgc acacggtcag caaaccgttt ccgccaccga cttgacagat
     2521 actttacaac aatggaagaa cgcataaatg gcagcccatc tcgaagaaca acaagagtta
     2581 gacaacttta aatatttttg gaaaaccacg ggcaaatggc tgtttgccct gctgattttg
     2641 gcggcactcg gctacttggg atacacggtt taccaaaacc gtgcggcttc ccaaaatcag
     2701 gaagcggcgg cggtgctggc aaacatcgtg gaaaaggcgc aaaacaaagc cccgcaaagc
     2761 gaaatcaatg ccgaactgtc caaactccaa caaagctacc cccattccat ttccgccgcc
     2821 caagccacgc tgatggcggc ggcaaccgaa tttgacgcgc agcgttacga tgttgccgaa
     2881 ggtcatttga aatgggtgtt gtccaaccaa aaagacagcc tgattcaggc gttggcggcg
     2941 cagcgtctgg gcgttgtgtt gttgcaacaa aaaaaatacg atgccgcgct tgccgcactc
     3001 gacacgccgg ttgaggcgga cttcgccccc ctgctgatgg aaactaaagg cgatgtttat
     3061 gccgcacagg aaaaaagcca ggaagcctta aaaaactacg gacaggcttt ggaaaaaatg
     3121 cctcaagatt ctgtcggtcg cgaattgctt caaatgaaac tcgattcgct gaaataaata
     3181 ccgtctgaaa tgccgctctc tcttcagacg gcatttcaga caaccccatc ctacggcaat
     3241 tcccgtaaaa ccatccgccg tgtcccaacg gacacctgct cgtgttcagt tctaccgaac
     3301 ggcacttgac acagaaagac ccaatcatga aaccaaccat cgcgcttatc ggccgcccca
     3361 acgtcggcaa atctaccttg ttcaaccgtt tgacgcgcac caaagacgcg ctcgtgcatg
     3421 acctgccggg tctgacccgc gaccgccatt acggacacgg caaagtcggc agcaaacctt
     3481 attttgtcat cgataccggc ggtttcgagc cggttgtgga cagcggcatt ttgcacgaaa
     3541 tggcaaaaca aaccttgcag gctgtcgatg aagccgatgc ggttgtgttt ttggtggacc
     3601 gccgtaccgg tttaacaccg caagacaaga ttattgccga ccgtttgcgc caaagtccgc
     3661 gtcccgttta tttggccgtg aataaaggcg agggcggcga cagggccgta cttgccgccg
     3721 agttttacga gctggcattg ggcgagccgc acgttatttc cggcgcgcac ggcgacggcg
     3781 tgtattacct gattgaagaa attttagaaa acttccccga gcctgaagcc gaagaagccg
     3841 atgcaaaaca tcccgttttt gccgttatcg gtcgtccgaa cgtcggcaaa tctacgctgg
     3901 ttaacgccat tctcggcgaa aaacgcgtca tcgccttcga tatggcaggc acaacgcgcg
     3961 acagcatcca catcgatttc gagcgcgaag gcaaaccgtt taccatcatc gataccgcag
     4021 gcgtgcgccg tcgcggcaaa gtggatgaag cggtggaaaa gttctccgtt atcaaagcca
     4081 tgcaggcggt tgaagcggca aacgttgctg ttttggtatt ggacgcgcaa caggacattg
     4141 ccgaccaaga tgcgacgatt gccggttttg ctttggaagc gggacgcgcg ctggtagttg
     4201 ccgtcaacaa atgggacggc atcaacgaag agcggcgcga acaagtgaaa cgcgacattt
     4261 cccgcaaact gtatttcctc gattttgcca agttccactt tatttccgcg ttgaaagagc
     4321 gcggtataga cggtttgttt gaaagcattc aagctgccta caacgcggcg atgattaaga
     4381 tgccgacgcc gaaaatcacg cgcgtattgc aaaccgccgt cggacgccaa cagccgccgc
     4441 gtgccggctt ggtgcgtccg aaaatgcgtt atgcccacca aggcggcatg aatccgccgg
     4501 tgattgtggt acacggcaat tcgctgcacg cgatttccga cagctatacg cgctatctga
     4561 cccagacctt ccgcaaagcc ttcaacctgc aaggcacgcc gttgcggatt caatacaatg
     4621 tttcggaaaa cccgtatgaa aatgcggaag acaaaccgaa gaaaaaaccg ctgcgccgcg
     4681 tcagcctgag caaccgtatt gagaaacgcg aaggccgaaa ggaagagaaa aaccgcttca
     4741 agaagaaaac caaagtcagt gtgaaaaaac aattcagcaa ataattcccg acatttcaaa
     4801 caataggaaa cattatgtgg ttcaagcaga ttagttttta tccgctcaac aaagaaaagc
     4861 tgcctgaggc ggacgtactt gccgacaaac ttgctgaagc tgaatttacc cattgccaag
     4921 gtttggactg gttcagcgaa ggctttaccg caccggtttc tttttcgccc gaactcgttt
     4981 tccctgccga ctttaccttg cgcgtcgccc tgaaaaaaga ggaaaaagtc ctgcctgccg
     5041 gcgtcatccg cgatattttg gaagagaagg tagcggaaat ccaaaacaat gaagcccgca
     5101 atgtcggtcg caaagaaaaa caagagctta aagagcaaat tacagacgac ctgctgcccc
     5161 gagcgtttac ccgcagcagc cgtacagaag cggtgtttaa cacccgccac ggctacctgc
     5221 tcgtcaataa cgcggcttcc gccaaagcgg aaaacatcct gaccaagctg cgcgaagctt
     5281 tgggaggttt ggaagcctcg ctgccgaata ccaaacaatc gccctcttcc ctgatgaccg
     5341 gctggctgtt gcaagggcat tgcgaaggcg gttttgaatt agacagcgat tgcgaactca
     5401 aaggtacggg cgatattgtt cccgtcgtca aagtatccaa acaagactta accgccgacg
     5461 aagtggttca acacgtcaaa aacggtaaaa ccgttacccg gctcggtttg gtttggcgcg
     5521 aacaaatcgc ctttatcctc actcaagact tcacactcaa gcgcatccaa tacctcgacg
     5581 tattgcagga agaagccgaa agcaacggcg acgatgccgc cggccttgcc ttcgcctcgc
     5641 aaatcctgat ggcggaatcc gtcagcacca tgttggaaga gctggtttcc tatttgggcg
     5701 gctggcaaga ttgatttttc agacggcttt tataccgtca gccaaaatcc aatggaataa
     5761 cccttatgct taaacatctc gcattcctac tgcccgccat gatgttcgcc ctccccgccc
     5821 agaccgccgt cctaagcccc tatcaggaaa ccggctgcac ctacgaaggc gggatcggaa
     5881 aagacgggct tccttcaggc aaaggcatat ggcgttgccg ggatgggcgc ggttataccg
     5941 gttcattcaa aaacggcaaa ttcgacgggc aaggcgttta taccgttgcc gccggccgcg
     6001 aagtatttct cgagccgttc aattccgaca gtaccaaatt ccgcaatatg gcattgtcgg
     6061 gcacgttcaa acaaggcttg gcacacggca ggttcgccgc ctcgcaaaac ggcgaaaccc
     6121 tcttttatta tgaaatgcga acacggcatg attaaagaag tgaaactgcc caaaaacaaa
     6181 taaccccccg tttttcaaac agcatccccc aatgctttat ccgaacaccg caaaaaacaa
     6241 ggaaacccca tgagcatcaa gtccgacaaa tggatacgcc gaatgagcga agaattcggc
     6301 atgattgatc ccttcgagcc gaaccaaatc aaagaagccg acggacagcg catcatctcc
     6361 tacggtacgt ccagctacgg ctacgatatc cgctgcgcca atgaatttaa aatttttacc
     6421 aacatcaaca gcaccatcgt cgatcccaaa aacttcgacc cgaaaaattt cgttaccgtc
     6481 gaagacgact gctgcatcat cccgcccaat tccttcgcac tggcgcgcac ggtcgaatat
     6541 ttccgcattc cgcgcaacgt cctgaccgtc tgtttgggca aatccaccta cgcccgctgc
     6601 ggcatcatcg tcaacgttac cccgttcgag ccggaatggg aaggctacgt taccctcgag
     6661 ttttccaaca ccacccccct gcccgccaaa atctacgcag gcgaaggcgt ggcgcaagtc
     6721 ctcttcttcg agagcgacga agtgtgtgaa acttcataca aagaccgcaa cggcaaatac
     6781 atgggacaaa ccggcgtaac cctgcccaaa gcctgaaata caaaatgccg tctgaaccct
     6841 tatcgtcggg tttcagacgg catctaccta tttatccgtg gttagaactg aaccgtccca
     6901 ttgatgctga tgctgatttc ctccacaccc ggtgcggctg aatccgtacc cttcatattg
     6961 acgcttgccg ccatcggcat cgcgcgcagc atttttgccc gaacagcccc atcgcccgca
     7021 atatggctgc cgatttgccc aaaattcaat ttgacgattt tataaccgga cgcacccaga
     7081 acgcccgcca gtttttcggc acgcgccttg aaacgcaaaa cggcatcctt gctgacctga
     7141 tcgatgacct cgtttcggcg ttcgcgcgac acgctgaaat cggtatcttc aagcgaagca
     7201 tccgtctgaa catcagcaat aaaacggttt aaagcatcaa aatccctgcc ctccgcctta
     7261 aattccgcac gctcctccca gcctgtttga atgcgtctgc cgttggtata ttgatagcgc
     7321 ggcatcgcac tgcgcgatac caattcggtt ttaaagctac catttttcga ttttctggtg
     7381 aaattgttga attttttaac aaattcggca ttgacggcat ttttgtcccg tccttccgcc
     7441 gccacctgga aacgcgcgga cattgtatcc tgagccacct cgatacccgc cgattcggaa
     7501 aattcgacaa tattgtaatt caatgcctca gccgccgccg gaaaagatac cgccagcagg
     7561 gaagccgcca aaatagaacg cagcatatcc gtatccttac ttgaaaaacc gccaatctaa
     7621 catataggta cgctaaattg cgttagcata agacaacaat ttaaatattc gatcggtctg
     7681 ccttataata accgtctttc cgatactgaa tcatattatg tccgaaccgt tgcacgtcct
     7741 cgtcatcccc ttatggtatc cacgatccga acaggatgtg gacggaatat ttttccaaaa
     7801 tcaagcacag gccctccaac gcaaaggcat caaaaccgcc atcctcgccc ccatgttccg
     7861 ttatctgcgg aaagaaacag caagcatcct gaccggtcct tacggttttg cccgataccg
     7921 gcaaagcggt ttggacatct acgcatggcg cagcatgtat ttcttccccg ctttccgttt
     7981 atcgacatcg accgcatccg ctgggtgcgc gccggtttga aagccttcaa acactacatc
     8041 cgcgaaaacg gactgcccga cctgattcac gcccactgca tgaactatgc aggcatactt
     8101 gcccaaaaaa tttccgaaaa atacggcatt ccctacgttt taaccgaaca cagcagcacc
     8161 atcacgcgcg gtctgatccg tcaccaccaa tggcagccga tggaaaaagc agcggcgccc
     8221 gcctccgcac gtctcgccgt cagccgccat ttcgcacacg tcctgcaaca caaatacggc
     8281 tgcgaatggc agtacctccc caacataccg ggtggaatat tcaagcaaac atttgaataa
     8341 aaagaaaaaa ataacaaacc gcatttcgtg ttctgcaccg tctcgcacct tcgccgcctc
     8401 aaaggacacg atgtcctgct cactgctttt gcccgggcgt tggcacaatg cccgcaactg
     8461 cgcctgaaca tcggcggcag cggacaggaa gaacagcggc tgaaacagca ggcggcagac
     8521 ttgggcatcg cccatgccgt tacattttta ggcgcactgc aacccgaagc aatcttggat
     8581 ttgatgagga acagcgacgc cttcatcctc gccagccgca ccgaaacctt cggcgtggtc
     8641 tatatcgaag ccctctcgca agggttgccc gtcatcgcca tacattgcgg cggcgcggaa
     8701 tccatcgttt cagacggcaa cggatacctc gtttccgttg acgatgccga tgtcctagcc
     8761 cttctcaaaa tatatgaaca ccatgccgat ttttccgccg aacagctcag aaccgactgc
     8821 ctcgcaacat tcggcgaaga tgccgttatc ggcagactga ttgccgtatt ccgtcaggcg
     8881 gcgcggaaca cggcgcgaaa acgcccgaaa aatagattaa aatgacgcaa aacaaccttc
     8941 ggattcaaat atgacccata ccgtccacct gcacttggaa gaaaccgaca acccgacgct
     9001 gcaacgcctg tgcggttctt tcgacagcaa cctcgattcg ctcgccaaag cactcgacat
     9061 ccatatcagc cgccgttttg aacatttcac tttcaacggt gcatttgcac acgccggcaa
     9121 acgcgcactg ctcaaactct tggaaacggc gcagacgcgc gacctaaacg acagcatcat
     9181 ccgccttgcc gccgtcgaaa cccaaaccga agatgccggg catcaggaaa aaaatcacga
     9241 acacgcctat tatttccgaa ccaagcgcgg cagcataggc ggcagaacgc cacggcagaa
     9301 cggctatatc cgcgccctgc tcgaccacga catcgtattc ggtctcgggc cggcaggtac
     9361 gggcaaaacc tatctcgccg tcgccgccgc cgtcgatgcg atggaaaaac accaagtcga
     9421 acgcatcatt ttagtgcggc ctgccgtcga agccggtgag aaactgggct tcctgcccgg
     9481 agacctgacc caaaaagtcg atccctacct ccgtccgctt tatgatgccc tctatgacct
     9541 gatgggcttt gaccgtgtaa ccaagctgat tgaaaaaggc ctgattgaaa tcaccccgct
     9601 cgcctatatg cgcggcagga cgctcaacgg cgcatacatc atcctcgacg aagcgcaaaa
     9661 caccacgccc gaacaaatga aaatgttcct gacccgcatc ggcttcggcg cgaaagccgt
     9721 cattaccggc gacaccagcc aaatcgacct gcccaaaaac atcaaatcgg gattgaaaga
     9781 cgcacgtgag aaactgcacg gcgtggcagg actgtatttc cataccttca ccggcgaaga
     9841 cgttgtccgg catcctctgg tgcaaaaaat cgtcgaagcc tacgaatcgg cagaacacga
     9901 ctgacactcc aatgccgtct gaaacccgat gcatggaaaa tcgggcagag aaaaacagag
     9961 acggaagcca agctccgtat ccgtttcttt atccgtccaa ccgatacatc aatcgaattt
    10021 tctgcatcgg attgcctcat ctccgcaaaa cattgccgaa gtttcgcggt tgcacgcctg
    10081 acgcactttc tgccgcgcca cgccttcatt ccgatcgctt gcctcaaacg tcttctgaaa
    10141 aggcgtaacg ctgcatacat acatggtgga atttgaaccg aaaaggtcga ttttgacggt
    10201 attgccgccg ctttccaata cggcgacacg gtgttccaac tgcgccagac gtgcttccaa
    10261 atcgctgatt ctgtcggcaa atgcaggcat ggcggcacac gcggtcaaaa tgcccaaaat
    10321 acattttttc atcaattttt ccttgttgct tgaaccctgc ccacccggac atcctttttc
    10381 cgggcggcag ggtcagactt tatttgcagg gatgaagccc cttacaaatc agaataatac
    10441 atgaatcggc actttatgct tcatcctatg tgttgaaact tcattgttcc ttgtctgttg
    10501 accgttattc ccaatccgtt cccacaacct tcggcttggg tttgcgcctg cgacggcggc
    10561 gttttttctc ctgtccttcg tttttttcgt gccgggcggc ggcctcgttt ttggtcattt
    10621 ccgtccgctg ttccgccgat gccgtctgaa acgccgtcca ccactcggca agtgcgcggt
    10681 ccgcattgcc ggtttcggcg cgcaagagca ggaaatcata ggcggcacgg aaacgcgcct
    10741 gtgcaaacag tttgtgcgga cgtgcgcctt tgcggttttc aaactgcggc tggaacatcc
    10801 aaatttcacg catcgtggcg gaaaagcgtt gcggtacgcc ccaaccgcgt tcgacggttt
    10861 cgcgcatcgt attgattgca tcggacaggg cgggcgtagg tttcaaaccc tgttgcagat
    10921 tgcttttcca atggcggtcc aactctggcc acatcagggc cgccagtacg aaaccgaccg
    10981 aaaccgattt gtcggcacgc agccgctcat cggtattttt cagggcaagc gccgtcattt
    11041 ttccggcgat gccgtctgaa acgcgcaaag cattgagcag cggatggatg tccggtatgt
    11101 caaatccgtt caaacgtttc agacactcgc gcgcgtgccc tgaaaacagc agtttcatga
    11161 tttcgtcgaa cagccttgcc acaggttcgt gcttcagacg gcatatcgat tcggcaatcg
    11221 gtgcggcggt ttcttccgac agctcaaagc ccaatttgcc cgacaggcgg atggcgcgca
    11281 aaatcctgac agggtcttcc tgatagcgtt cggcggcatt accaatcata accagcctgc
    11341 gggcggcaac atcggcaatc ccgttgtgga aatccaaaat ctcttctttt tcaggatcgt
    11401 aatacaaggc attgcaggta aaatcgcgcc gcatcgcatc ttcttcgatg ctgccgtagg
    11461 tgttgtcctt catgattctg ccgtgcgcgt tctgatgaac cttcgcaccg ccgcgaaacg
    11521 tcgttacttc gataatctcc gcaccgttca tcacatggac aatctgaaaa cgcctgccga
    11581 tgatgcggct gcggcggaag agtttgtgca cctgttcggg cgtggcatca gttgcgacat
    11641 cgaaatcttt gggttcgatg ccgagcagca ggtctctgac cgcaccgccg accacataag
    11701 cctgaaaccc cgcccctttc aggcggcgta tgacgttttc ggcggcaaag ctcaacattt
    11761 cggcacggat gttgtgtctt tcggcaggaa tgaccgtttt actttccgct tttttactgc
    11821 tccgaccgga aggcagcatc ttattcaacc attttttcag cataaatatt ctgacccgaa
    11881 gagcggcatc tccacgggca accgtgttca gactgcatca ggcggtacga ttccacaaga
    11941 tgccgaaaac cataagcaaa aggcgtagaa actacgccgt ccgaatcacg ccgccctcgc
    12001 ggcggcaacg cgtcattata acagattgcc ccttaaaaaa tcagaccctg cttttgtggc
    12061 ggagtctgaa atttgatgca ccttatatat tgcgtcccta agaagggatg attaacaaaa
    12121 attaacaccc tttactttct tttccgattg ggaacattcc cgtcgtacaa acaagcaaat
    12181 gaagcaacag aaatcacatt caaacggcgt tccgccgcct ctacgccgct tcccagtagt
    12241 cgatataaag ctgcaattcg aggttgtcgc gccattcgtt ggcaacgggg cggtacaccg
    12301 tgcggatgta ttcgggaatg tcttcgctgc aacgccagaa catcgcttca aattcgcagc
    12361 cgtctttttg caaccacgct tttttgtgtt tgccttccgc gcccaaaggc tgctggcgaa
    12421 cgacgtggaa ctcgtcggta aagctcggcg gcgcaaagcc ctgcccccaa acgtggcagg
    12481 cgaggttttg cgcctgttcc aacgtgatgt cgcaggcggg caggctgccg tcagtaatat
    12541 aggtttgcga caaatcgtct tcgcacacca tctcacgcac ggcttcttca aaggccgtct
    12601 gaaacgcggg aatattgtgt tcaagtatgc ttaaacccgc cgccatcgcg tgtccgccga
    12661 atttcaaaat caaatcggga tggcgtttgg acaccaagtc caaagcatcg cgcaagtgca
    12721 gattgggaat ggagcgtccc gaaccgcgca cttcgccgtt gtccgccggc gcaaacacga
    12781 tggtcggacg gtaaaaacgg tctttgaggc ggctggcaac aatgccgacc acgccttgat
    12841 ggaagtcgtc gcgatacgcc accaaagtcg tctgacctga aggcagggtt tcgggaaagg
    12901 cgttcaacgc gtctcgcagc atagactgct cgatttcgcg gcgttcgata ttgaggttgt
    12961 ttaaccgagc cgccagttcc tgcgcttcgg aatcatctcg cgccaacagg caggcgatgc
    13021 cgaccgacat atcgtccagc cgtccggcgg cgttgatgcg cgggcccaac gcaaagccca
    13081 tatcaaacgg ctgagccttg cgccaatcgc gccgcgccac ttcaaacaag gcgcggatgc
    13141 cggggcgcat tttgcccgaa cgcatccgtt tcaaaccttg cgacacgagg atgcggttgt
    13201 tgtggtcgag ggggacgaca tcggcgacgg taccgagtgc gaccaaatcc aaaaggccgc
    13261 ccagattcgg ctctttgatg ccgtctgaaa aataattgcg gcggcgcagt tcggcacgca
    13321 acgccgtcaa cacataaaaa atcacgccca cgcccgccaa gcttttgctt ggaaaaccgc
    13381 agcctttttg gttcggattg acgatgatgc agtcgggtac ggtatcggct ggcaaatggt
    13441 ggtcggtaac gatgacatcc aaacccagag cctgcgcgcg cgccacgcct gcaatactgg
    13501 caatgccgtt atccaccgta atcagcaaat ccacgccttg cgcggcggcg atttcggcga
    13561 gttcgggcgt taagccgtag ccgtgctcaa agcggttggg cacgaggaaa tccactttcg
    13621 cgcccatcgc cgccaaaccg tccaaaccga cggcacacgc ggtcgcgccg tcggcatcat
    13681 agtcggcgac aatcaggatt ttttccttgc gttcaaccgc atccgccaaa cggccggcgg
    13741 cggcttcgca attcgtcagc gattgataag gcaggaggga agcgagtttg tcgtccaact
    13801 cggcaggact ttgcacaccg cgcgaggcac aaagccgggc gattaaagga tcggcgccgg
    13861 cggcgagcaa atgattgaaa acgtcggtat tgacggggcg ggtttggatt ttgactgaca
    13921 tagcgcgggg ttttacagtg cgggtgtgct tgaaatgccg tctgaaggct tttcagacgg
    13981 cattgccgtt catttgtctg aggaattcgc ggctgcaatc agagccatag gcaagaccag
    14041 caccgcggcg gccgcatcca atatcaacaa ggggggcgta tactaagata tttccaaaca
    14101 gcttggattt gtcggtatgt ttttcagtaa ccgtataata aatatcggcg ggcacacttt
    14161 gctcaaaatg ataatcggcg ttcagttttt gcggtgtggc gtagtatttg cctttggcgg
    14221 atacgcagcg cgtgtaaatg gtccgattgt cgagtttgac cgctttaaac tcaagctgtt
    14281 tcagcttggc gatgtcgtca ggtctgccgg tatcatagcg caggcaaaga c
//
LOCUS       DAXGCP010000059        14304 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.059, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000059 DAXGCP010000000
VERSION     DAXGCP010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14304)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14304)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14304
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.059"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(99..2570)
                     /locus_tag="ACFJCW_001476"
     CDS             complement(99..2570)
                     /locus_tag="ACFJCW_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HFC4151593.1"
                     /translation="MKKTCFHCGLDVPENLHLTVRYEGEDRETCCVGCQAVAQSIIDS
                     GLGSYYKRRTADAKKTELPPQEILDQIRLYDLPEVQSDFVETHNGTHEAVLMLSGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQTGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRAGMDTPIAAAIIMTFIAGIYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHRMPGYPAVQDVRESAVVKLQ
                     AGDIVMVKPGETIPVDGTVLEGNSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLSQTTD
                     IIFDKTGTLTQGNPAVRRIELLGSMTEAQVLAVAQSLEQQSEHPLARAILNCRISGGS
                     VPEIQVGQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLQDPLKDSAAEAVRQLAGKNLTLHILSGDREEAVAETARALGIAHYRA
                     QAMPEDKLEYVEALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMPSEKILSEQ"
     gene            complement(2567..3745)
                     /gene="hflX"
                     /locus_tag="ACFJCW_001477"
     CDS             complement(2567..3745)
                     /gene="hflX"
                     /locus_tag="ACFJCW_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HFC4151594.1"
                     /translation="MSGRTGRNSATQAQPERVMLVGVMLDKDDTGSNAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKILQCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLTAHRINALKKQLANLKKQRALRRKSRESGRIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPACSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAHDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAEYCAAAPNTDETEMP
                     "
     gene            complement(3751..5031)
                     /locus_tag="ACFJCW_001478"
     CDS             complement(3751..5031)
                     /locus_tag="ACFJCW_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HFC4151595.1"
                     /translation="MKSLFIWLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRTQIGLHALAHAPVLENSARRHARYLTLNPEDGHGEHHPDNPHYTAQKLT
                     ERTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAVYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGSFERACAKGRRQPEAGRKYYRNACHNGAAVYADEAMP
                     VTELLYTAYPVGGGALPYFYGERPDPVPEYEITGNPASIDFSEAAGKIAMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAHQFALFPLKPLEYGTLYTAVFDYVRNGRHAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRRQFGNSLSILRHE
                     AGGIVFSVSGMAGSRIRLTPEDSPERGVTLYLQD"
     gene            complement(5183..5908)
                     /locus_tag="ACFJCW_001479"
     CDS             complement(5183..5908)
                     /locus_tag="ACFJCW_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HFC4151596.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENMRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVAYWDFNWRKGGGGARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPV
                     KLGVLYYGDESTQYEPAPVRVDK"
     gene            complement(5981..6658)
                     /gene="radC"
                     /locus_tag="ACFJCW_001480"
     CDS             complement(5981..6658)
                     /gene="radC"
                     /locus_tag="ACFJCW_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HFC4151597.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILEEELQEEIT
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQTVRSF
                     RQLGLMP"
     gene            6685..6807
                     /locus_tag="ACFJCW_001481"
     CDS             6685..6807
                     /locus_tag="ACFJCW_001481"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151598.1"
                     /translation="MPSETDVPTRQISEMPSEPDFRFRRHLYFKTVLRRFFQLD"
     gene            complement(6781..8130)
                     /gene="gshA"
                     /locus_tag="ACFJCW_001482"
     CDS             complement(6781..8130)
                     /gene="gshA"
                     /locus_tag="ACFJCW_001482"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HFC4151599.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWNAHRPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETEKSVLIIPE
                     NHTRNTFYLQNVYALGEIFRSAGCEVRLGSLNPEVTEPAEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGIGQTVLPPLHGGWTTRRKTNHFGAYNQV
                     AAEFAKLIDIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGIAD
                     KPFVIVKADAGTYGMGVMSVKSSDEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGVYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            8382..9791
                     /gene="leuC"
                     /locus_tag="ACFJCW_001483"
     CDS             8382..9791
                     /gene="leuC"
                     /locus_tag="ACFJCW_001483"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HFC4151600.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDQNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLIAVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAVEFGGEAIRSLSMEGR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKGKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLNIGGKVPNPAEETDPVKRSGIERALEYMGLKAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKGHKKAGNVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLAPRQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGHFTDIRTMA"
     gene            9886..10140
                     /locus_tag="ACFJCW_001484"
     CDS             9886..10140
                     /locus_tag="ACFJCW_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151601.1"
                     /translation="MNKLFVTALSALALSACAGTWQGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGKKIENATE"
     gene            10202..10843
                     /gene="leuD"
                     /locus_tag="ACFJCW_001485"
     CDS             10202..10843
                     /gene="leuD"
                     /locus_tag="ACFJCW_001485"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HFC4151602.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNGKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAIIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAEQTLT
                     TPGGETFTFDITEHRKHCLLNGLDEIGLTLQHADKIKAFEEKRRQSQPWLFNG"
     gene            11010..12281
                     /locus_tag="ACFJCW_001486"
     CDS             11010..12281
                     /locus_tag="ACFJCW_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4151603.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDSTQKIGRTLTVILETLEALGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETSPSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGAVTEEEKQLLNILLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPDLQNILDSLTDKGYLVLEHPKQKIGGQRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDRCDLLGNTVAVPVIKAVSERLLHTL"
     gene            12297..13028
                     /locus_tag="ACFJCW_001487"
     CDS             12297..13028
                     /locus_tag="ACFJCW_001487"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HFC4151604.1"
                     /translation="MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNACPGFDIA
                     DFKMYSNEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            13062..14132
                     /gene="leuB"
                     /locus_tag="ACFJCW_001488"
     CDS             13062..14132
                     /gene="leuB"
                     /locus_tag="ACFJCW_001488"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HFC4151605.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKFIAQGLDADYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEHEGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKQYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTGD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            complement(14160..>14304)
                     /locus_tag="ACFJCW_001489"
     CDS             complement(14160..>14304)
                     /locus_tag="ACFJCW_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4151606.1"
                     /translation="NQAKRALRKYNGIDRKPFPPLLRECEFRLNFGTPSRQLKILRDW
                     CGI"
BASE COUNT         3390 a         3820 c         3752 g         3342 t
ORIGIN      
        1 aacgtgtttg agcggtaaca atgcatactt taagtttgta atccttcatc gtctcatttt
       61 tgttttaatc gactatacgt ctaaagcaac gccgcccgtc attgttcgga cagtattttt
      121 tcagacggca ttttcccccg tttgtgaagg cgcaaggcat tgcccaaaac cgccagcgaa
      181 ctgaaactca tacccagtgc ggctatccac ggttggacat agcccaaaac ggcaagcggt
      241 acggcgatga tgttgtacgc gcccgcccat atcaggtttt gccggataat atggcgggtg
      301 cgccgcgcct gatcgagcag gtgggcgacg gtacgcaaat cttcgttcaa taacacaatg
      361 tccgcgccgt ccctcgcaat atccgtcccg ccggctgcgg cggcggatac gtctgcctgc
      421 gccaaaacgg gcgcgtcgtt gatgccgtcg cctatcatca gcactttttt cccttctttt
      481 tgcaaggctt cgacgtattc cagcttgtct tccggcattg cttgggcgcg gtagtgcgcg
      541 atacccaagg cacgggcggt ttcagcaact gcttcttcac ggtcgccact gaggatgtgc
      601 agcgtcaggt ttttgcctgc caactgccgc actgcctccg ccgcgctgtc tttgagcggg
      661 tcttgcaggt agaacacggc ttggaaaccg ctttgactgc cgaggtaaac cgcgctgccg
      721 ccgccttctg tttgcggttc tttacctgaa atttcggcaa cataggatgc cctccccaat
      781 gcccaaacct gtgtttcgcc gttgacggtc agttgcgcac ccacgccttc cccgatgcgg
      841 ttgaggcgtt gtccgacttg gatttcgggg acgctgccgc ctgaaatgcg gcagttgagg
      901 atggcgcgcg cgagcgggtg ttctgactgc tgttccaaac tttgcgccac tgccagcact
      961 tgggcttcgg tcatgctgcc gagcagttca atccggcgga cggcgggatt gccttgggtc
     1021 agcgtgccgg ttttgtcgaa aatgatgtcg gtggtttggg agagggtttc gattgcctgc
     1081 tttccgccga ttaaaatacc ttcgcgcgcc agcgtaccgg tagaagctgc cagcgcggtc
     1141 ggcgtggcaa gcgacagggc gcaggggcag gtaatgacca gcagggcgac ggtaatccac
     1201 aatgcggtgt gcgcgtcggc gtacagcgtc caaccgatga agaccgggac ggcaagcagg
     1261 agttcgccga atatgaaaga tgaggcgtat tgttccgcca actcggcagt gcgcggtttt
     1321 tgcgccaagg cgcggtcgag caggcggacg atgtgcgaca ggcgcgtgcc gccgccggtg
     1381 cggtcggtgc gtataatcag agggctttgc gtgttgagtg tacctgcggt tactttttca
     1441 gacggcattt tggcgacggg caggctctcg ccggtcagca tagattcgtt gacggcactg
     1501 tttccttcca gcaccgtgcc gtcaacgggg atggtttcgc cgggtttgac catcacaata
     1561 tcgcctgctt ggagtttgac gacggcggat tcgcggacat cctgtacggc aggatagccg
     1621 ggcatccggt ggcagaaggc gggtatcagt ttcaccagcc tttcggcggc atcgcctgcc
     1681 ttgcgtcggg caatgtgttc cataaagcgt ccgcccagca ggaaaaacag cagcatcgcg
     1741 atggattcga aatacatccc ctgccctgcg ttggtggcga ggctgtaaat gccggcgatg
     1801 aaggtcatga tgatggcggc ggcaatcggc gtgtccatac cggcgcggcg gtttttcagg
     1861 tcgcgcaacg cgccttgata aaacgggacg gcgcaataaa atacgacggg cagcaccatc
     1921 aggaagccgc cccaatggag gatctgcagg aaatcgggtt cgatgtcgcc gccgtaaagg
     1981 taggtcggca gcgcgaacat catcgtctgc atcataccca gtccggcaac ggcaaggcgg
     2041 acgatgtatt gtttgcgttc tttttggttg gcggcttcga ttttttgcgc gtcatagggt
     2101 gcggcggtgt agcctgtctg ccggattttc aacagaatgt cggagaggcg gattttgccg
     2161 tcgtcccaga cgacgcggca gcggtgcgtg ctgtaattga ggtcgatgcg gacgatgccg
     2221 tctgtgcgca aaagctgctg ttcgatcagc cagacgcagg cggcgcaggt aatgccgctg
     2281 agcatcagca ctgcttcgtg cgtgccatta tgggtttcca caaagtcgga ttggacttcg
     2341 ggcaggtcgt acaggcggat ttggtcgagg atttcttggg gcggcagttc ggtttttttc
     2401 gcgtcggcgg tgcgtcgttt gtaataactg cccaagccgg aatcgatgat gctttgtgcg
     2461 actgcctgac agccgacgca gcaggtttcg cggtcttcgc cttcgtagcg gacggtcaga
     2521 tgcaggtttt cgggaacgtc cagcccgcag tggaaacagg tttttttcat ggcatttcgg
     2581 tttcgtctgt gtttggtgcg gcggcacaat actcggcaat ggcttcgcgc agtgcgtcta
     2641 taccggtatt ttcagcaacg gaaatgcgga cggcggcaat ttttcccgca gcgtcgcgcc
     2701 atatgcccgt gttttgttct tcagacggca gcaggtcggt tttgttgtac accttgatgc
     2761 acggaatatc gtgggcatgg atttcttgca gtacgttttc cacgtcttca atctgctgtc
     2821 cgctgttcgg ggcagcggca tcgacgacgt gcagcagcac atcggcttgc gcggtttctt
     2881 ccagcgtggc ggaaaatgcc gaaatcagtt tgtgcggcag atcgctgacg aatccgacgg
     2941 tatcggtcag gataatgctg catgcgggac tgatgtacag ccgccgcgcc gtcgtgtcga
     3001 gagtggcgaa aagctggtct ttcgcatata tgcccgactt ggtcagccgg ttgaacaggc
     3061 tggatttgcc gacattggta tagccgacca gcgcaaacgt tttgattctg cccgactcgc
     3121 gggacttgcg gcgcagggcg cgctgttttt tgaggttggc aagctgtttt ttcaaggcgt
     3181 tgatccgatg ggcggttaat cggcggtcgg tttccagttt ggtttcgccc ggccctttca
     3241 tgccgatacc gccgcgctgg ctttgcaaat gtccgtaacc gcgtatcaag cgtcccgcca
     3301 aatggctcaa ttgcgccaac tcgacttgca gcctgccttc ctgcgtgcgg gcgcggcggg
     3361 cgaaaatcgc cagaatcagc cccactctgt ccaatacgcg gcattggagg attttttcca
     3421 aattgcgttc ctgcgtggga gtaagttcgt ggttgaatac gaccaaatca atgccgtctg
     3481 cggcaactgc ttccgacagc tccgccgcct tgcccgtgcc gacaaacagc gcagtgtgcg
     3541 ggcggtcgcg tttggcagtc tccacgcgta cggaatcgcc gcccgccgct ttgaccagct
     3601 cgacggcttc cgccaatgcc gtctgaaaac cgttcagacg ggcggcattg ctgcccgtat
     3661 catctttatc caacattacg cccaccagca tgacgcgttc cggttgcgcc tgagtggcac
     3721 tgttccgtcc tgttctacct gacataactg tcaatcctgt aaataaaggg ttacaccgcg
     3781 ttccgggctg tcttccggag taagcctgat gcggcttccc gccattccgc tgacgctgaa
     3841 gacaatgccg cccgcttcgt gccggagtat ggacaggctg ttgccgaact gccgccggta
     3901 ggtataacgg gtacacgctt ccagacacca gcgtccgcgc cagtggatga aatatttttc
     3961 gccttttcta accgcaagtg tctcgccgcc gtttacctca aaataagggt aatcgggttt
     4021 tcgggttcta aactgccatt tcgcctgcgc gtgccgtccg ttgcggacat agtcgaatac
     4081 cgccgtataa agcgtgccgt attccaaagg tttgagcggg aaaagggcga attggtgcgc
     4141 ggtcagcctg ccgttagggt cgttgccggc ggttaaaacc ctgacggggc ggatttcgtt
     4201 tttaccctga tacagcttga aacttttcat cgcaattttg cctgccgcct cggaaaaatc
     4261 aatgctggca ggattgcctg tgatttcata ttccggcacg gggtcgggac gttccccgta
     4321 aaaataaggc agcgcgccgc cgccaaccgg ataggcggta taaagcaatt ccgttacggg
     4381 catggcttcg tcagcataaa cggccgcacc gttgtggcaa gcgttgcggt aatatttccg
     4441 tcctgcttcc ggctgccgcc ttccttttgc acaggcgcgc tcgaagctgc cgttgccctg
     4501 attgaatacg aggacggttt tgccgttttc gcgcacaaat gccgcacctg cttcgtcggt
     4561 atggcggtca agcagcgaaa ggcggtgata gacagcactc atcaatccgt ctacttggcg
     4621 ttgctgcgtg cggatgtcgc tgtcggacga ttcggcggct tcctcttccg tgctgatgtt
     4681 ttcatgcacg ccgttgtaga gatacccggc aaggcgtgtg cgttcggtca gcttttgtgc
     4741 ggtgtagtgc ggattgtcgg gatggtgttc cccgtgtccg tcttcgggat tgagcgtgag
     4801 atagcgtgcg tgcctgcggg cggaattttc caaaaccggc gcgtgtgcca gcgcgtgcaa
     4861 accgatttgt gtgcggatgc ggttgaggta gtgcagcgca tcgccgccgt ccctgatttg
     4921 cggtgcggac ggatagacaa gttcgcccgc gggcagggat tggttttggg tatggtagaa
     4981 aacgcctgcc gccgagccca atagaagcag ccaaataaaa agggatttca taatgccgcc
     5041 ctcccgacgc ggcaacgggg tgttttatca aaacggcaaa cttgccaatg cggtttccgc
     5101 ttgccgattg ccaaaccggc aaacctttcc cgtgccggtg ccgaacccga tgccgtctga
     5161 accttcagac ggcatcgggt gtttatttgt ccactcggac gggtgcaggt tcgtattgtg
     5221 tcgattcgtc gccgtaatac agcacgccga gtttgacggg gatgcgtccc tgcgatttgc
     5281 ggtgggcgtt ggaatcgcgc aaggaatagg cgcagccgca gtattcctgc tggtagaagt
     5341 tttcgcgttt gctgatttca atcatacgcg cgccgccgcc gcctttgcgc cagttgaagt
     5401 cccaataggc cacatcatcg taaggcgcgg cggcacggtg tccgcagtcg ttgatttgcg
     5461 ccatattttt ccagcgtgaa atgcccagcg aactggtaaa gacgggaaaa ccgtgttcgt
     5521 gcgcgtattg cgccgctttt tcaaaacgca tatcgaaaca catggtgcag cggatgccgc
     5581 gttccggctc aaactccatg cctttggctt tggcaaacca ttctttgcgg tcgttttcgt
     5641 agtcgtcgtc tttatcgatg aaagggatgc cgaacttttc cgcaaagcgc atgttttcct
     5701 cttttcggag catatactct ttgtgcggat ggatattggg attgtaaaaa taaatggtgt
     5761 agtcgatgcc ggaggcaagc atggcttcca tcacttcgcc gctgcacggg gcgcagcagg
     5821 aatgcagcaa gactttttta tgtccgccgg gcgggacgag tatggggcgg tcaatgtcgg
     5881 taacggtagg tttgttttgt gtttccatta acttaacaat atctgtcgaa tacggtcaaa
     5941 gcggctattt taccagagcc gccgaatgta aaacagggtg tcagggcatc agcccgagct
     6001 gcctgaacga acggacggtt tgcgaggtaa cgataaaatg gtcgagcagc gaaacatcaa
     6061 ccagcgacat ggcctgtgcc agccgccttg tgaacatgat gtcttcctgc gaaggttcgg
     6121 gcgagccgcc cggatggttg tgcgcgataa tcaggctgtc ggcatattcg tccaatgcca
     6181 gtttgacgat ttcgcggatg taaatcgtgt tttccgcaac cgtaccgcgc gacagctctc
     6241 tgaccgcaat cagttggttt tggcggttca gcagcagcgc gacgctgact tcgacttttt
     6301 cctgccccaa atgaaagcgt aaataatcgg caacggtatc gggatcggat aaggtaattt
     6361 cttcctgcaa ttcttcctcc aatatccgcc gcccgatttc cctgaccacg gcgaactgtg
     6421 tgaaacttgc cgtccccatc cctttgtatg ccgacagttt gccgacctcc gcgctcatca
     6481 gcctccccaa gctgccgaac tcctgcaata ggtagcgcgc caaatcgacc gcgctcatcc
     6541 cgcgcgtccc gacgcgtaaa aggattgcca aaagttcggc atcgctcaaa gccgccgccc
     6601 cgcgttccaa cagcttttcc ctgggccttt cgccttccgg ccattgcttg atgctcatgt
     6661 tttccctttt ttaaatagtc tgagatgccg tctgaaacag atgttcccac acgccaaata
     6721 tccgaaatgc cgtctgaacc ggatttccgc ttcagacggc atctgtattt caaaacagtc
     6781 ttacgccgtt tcttccaact cgattgaagc cgccaaaagc gacagacgtg ccattacgcc
     6841 gtaaacgtag aggcggttat gttcgttgtc cacgtcgcag tctttttcag aacgcggcat
     6901 accgagcgaa tcccattgtt cgaatacgcg tttgcaggct tctggagctt cttgcgaatt
     6961 atcgccgtta ccggtaggaa tgctgttgga cagcggcaca aacaccatac cgccggcgtt
     7021 gaggttttcg tccgcaccgc gcccttcgtg tacgcggaaa aagccgccga tgacgaaacg
     7081 gtccatcata tagacgacgg gttcgcacac cgcgccgttc aaggtttcat aggtataaac
     7141 cccttcttgg acaatcactt cgctgacttc caagccctct ttcaccttcg ccattttgtt
     7201 gcggtttttg cggttcaagc cgcgcacttc gtcggaggat ttgacgctca tcacacccat
     7261 gccgtaagtg ccggcatcgg ctttgacgat gacgaaaggt ttgtcggcaa tgcccgattc
     7321 gtcgtatttg gcttgaattt tcgccagcac gcgttctacc gcttccgcca gcgcatcttc
     7381 accttcgcgc ccttggaagt ccaaaccgcc gattttttca aaatacgggt tgatctgcca
     7441 ttcatcgatg tcaatcagct tggcaaattc ggcggcaact tggttgtacg cgccgaaatg
     7501 atttgttttg cggcgcgtcg tccaaccgcc gtgcagcggc ggcaaaacgg tttggccgat
     7561 gcctttgaga atgtcgggaa tgccggcgga caaatcgttg ttcaacaaaa ccacgcaagg
     7621 cgaaaagccg tcggcaaggt ggacgcggtc gcgggttcgc agcaaaggct caagcaggat
     7681 tttgtcgccc aatgcagttt caaattcggc cggttcggtt acttccggat tcaggctgcc
     7741 caagcgcact tcacaccctg ccgaacggaa aatctcgccg agggcgtaaa cgttttgcag
     7801 gtaaaacgta ttgcgcgtgt ggttttcggg aataatcaat acggatttct ccgtttcgca
     7861 ggcgcgttgc accgcatctt gcgcggcaac cgccgccagc gggatgaaat tcggattcag
     7921 attattgaag ccgcccggaa acaaattcat atcgatagac gaaattttgt aaccggcgtt
     7981 gcgtatatcg accgaaccgt aaaacggcgg gcggtgcgcg ttccactgcg tgcggaacca
     8041 cgcctcgatt ttggcgtgat tggacaggat ttttgcctca aacgcctgaa gttgcgccga
     8101 atgttcgggc gacataaccg gtaatttcat ctttcgtctg cctctgtgtg ttttttgaca
     8161 aggtacagat aataatgctt ttgaaagaat gacgacaagt attctttcgt atcgaatcat
     8221 tctttagata taacgaaatg aacaatatgt ctaatttttt cgttaaaatt gtttacaaaa
     8281 taacaccgac tcaaaaatta gacaaaatct gttgcgcagt ataaagaata cgtctaaaat
     8341 ccgcccaatc cgcatcacca tttatccaaa agaacaacat catgacggca caaaccctct
     8401 acgacaaact ctggaacagc cacgtcgtcc gcgaagaaga agacggcacc gtcctgcttt
     8461 acatcgaccg ccatctggtt cacgaagtaa ccagcccgca ggcgtttgag ggtctgaaaa
     8521 tggcggggcg caagctgtgg cgcatcgaca gcgtggtctc caccgccgac cacaacaccc
     8581 cgaccggcga ttgggacaaa ggcatccaag acccgatttc caagctgcaa gtcgatacgt
     8641 tggatcaaaa catcaaagag tttggcgcac tcgcctactt cccgtttatg gacaaaggcc
     8701 agggcatcgt acacgttatg gggcccgaac aaggcgcgac cctgcccggg atgaccgtcg
     8761 tctgcggcga ttcgcacact tccacccacg gcgcattcgg cgcactggca cacggcatcg
     8821 gcacttccga agtcgaacac acgatggcga cccagtgcat taccgcgaaa aaatccaaat
     8881 ctatgctgat tgccgttgac ggcaaattaa aagcgggcgt taccgccaaa gacgtggcgc
     8941 tctacatcat cgggcaaatc ggcacggcgg gcggcacggg ttacgccgtc gagttcggcg
     9001 gcgaagccat ccgcagcctt tcgatggaag gcaggatgac cctgtgcaat atggcgattg
     9061 aggcaggcgc gcgttccggt atggttgccg tcgatcaaac caccatcgac tatgtcaaag
     9121 gcaagccctt cgcacccgaa ggcgaagctt gggacaaagc cgtcgagtac tggcgcacgc
     9181 tggtgtctga cgaaggcgcg gtttttgata aagaataccg tttcaacgcc gaagacatcg
     9241 aaccgcaagt tacttggggc acgtcgcccg aaatggtttt aaacatcggc ggcaaagtgc
     9301 cgaatcccgc cgaagaaacc gatccggtca aacgcagcgg catagagcgc gcactcgaat
     9361 atatgggttt gaaggccggt acgccgctga acgaaatccc tgtcgatatc gtctttatcg
     9421 gctcttgcac caacagccgc atcgaagact tgcgcgaagc cgctgctatc gccaaaggcc
     9481 ataaaaaagc cggcaacgta cagcgcgtgt taatcgtccc cggctccggt ttggttaaag
     9541 aacaagccga aaaagaaggc ttggacaaaa ttttcatcga agccggtttt gaatggcgcg
     9601 aaccgggctg ttcgatgtgc cttgcgatga atgccgaccg cctcgcgccg aggcaacgct
     9661 gcgcctccac gtccaaccgc aattttgaag gccgccaagg caacggcggg cgcacccacc
     9721 tcgtcagccc cgctatggcc gccgccgccg ccgttaccgg acactttacc gacatccgca
     9781 cgatggcgta agtattttca ggcagtcttt aagaatttga cgaggccgtc tgaaatatgt
     9841 cccgtaaggc agaaacacct aatattcaaa ccaaggagtt taaccatgaa caaacttttc
     9901 gttaccgccc tgtccgccct cgccttgtcc gcctgcgccg gcacttggca gggcgcgaaa
     9961 caagacaccg cccgcaacct tgacaaaaca caggccgccg ccgaacgcgc cgccgaacaa
    10021 acaggcaacg ccgtcgaaaa aggttgggac aaaaccaaag aagccgtcaa aaaaggcggc
    10081 aatgccgtcg gacgcggcat ttcccatctc ggcaaaaaaa tcgaaaacgc caccgaataa
    10141 ccgatttgcg atgccgtctg aaaccgtttc agacggcatc gtcagcacaa gacgcaaacc
    10201 catgaaagcc tttaccaaaa tcaccgccat cgtcgccccg ctcgaccgca gcaacgtcga
    10261 taccgatgcc atcatcccca aacaatttct gaaatccatc aaacgcagcg gcttcggccc
    10321 caacgccttt gacgaatggc gttacctcga ccacggcgaa ccgggcatgg acaacggcaa
    10381 acgcccgttg aaccccgatt tttccctgaa ccagccgcgt taccaaggcg cgcaaatcct
    10441 gttgacgcgt aaaaacttcg gttgcggctc ttcacgcgaa catgcccctt gggcattgga
    10501 cgactacggc ttccgcgcca ttatcgcccc cagcttcgcc gacatcttct ttaacaactg
    10561 ctacaaaaac ggccttttgc ccatcgtgtt gaccgaagaa caagtcgacc ggcttttcaa
    10621 agaagtcgaa gccaacgaag gctatcggct ctccatcgac cttgccgagc aaaccctgac
    10681 caccccgggc ggcgaaacat tcacattcga cattaccgaa caccgcaaac actgcctctt
    10741 aaacggcttg gacgaaatcg gactgaccct gcaacacgcc gacaaaatta aagcctttga
    10801 agaaaaacgc cgccaaagcc agccttggct gtttaacggt taaaacctat gccgtctgaa
    10861 ggctgttcag acggcattcc tgataacata taattgctgc ggctaatgta aacagagggg
    10921 cgataaattg ttttcatctt ttaagcgggc ttagcaacac tctaaattaa tgcaactctc
    10981 catttcaaat aaatttttag atttttaata tgcaacaaat taaatttatt gacttatttt
    11041 ccggaatgag tggcatcagg aaaggattcg aacaagcctg tcggaaacag tcggttgctt
    11101 gcgaatgtgt ttttacttca gaaatcaaac cggcagcttt ggaagtattg aagcaaaact
    11161 accctgatga agtgccgtat ggagatataa cgaaaattga aacaggggat attcccgatt
    11221 ttgacatcct gttggcagga ttcccttgtc aggctttttc tttcgccgga aaaagattag
    11281 gctttgaaga tacacgggga acgcttttct ttgatgtggc aaggatttta aaggcaaaaa
    11341 aaccaaaagg ttttattttg gaaaatgtgg aaggattggt gacacacgat agaaaagatt
    11401 cgacacaaaa aatagggcgc accctgaccg ttattttgga aaccttggaa gcattgggct
    11461 actatgtttc ttggaaagtt ttaaatgcaa aagatttcgg cattccccaa aacaggaagc
    11521 gcatttatct gacaggcagt ttgaaatcca aacccgactt atctttcgaa acaagcccaa
    11581 gtccgaaatt aaaaaatatt ttggaatcgg gactgcctac tgaaagcagc cctttcatca
    11641 aaaaattgct aaaaaaattt cccccgtccg aactgtacgg aaaatcagta aaagacaaac
    11701 ggggagggaa aaacaatatt cacagttggg atattgaatt aaaaggcgca gtaaccgaag
    11761 aagagaagca attgttaaat atccttctaa aagaacggag gaaaaaaaaa tgggcttcag
    11821 aaatcggcat agattggatg gatgggatgc ctttgacaaa agcgcaaatt tcaactttct
    11881 ataaacaccc cgatctccaa aatattttgg acagcctgac agacaaaggc tatttggttt
    11941 tagagcatcc gaaacaaaaa attggcgggc aaagaatcaa agatgaatcc ctgcccaaag
    12001 gctacaatat tgtttcaggt aaaaaatctt ttgaaatcaa taaaatatta gatccaaacg
    12061 atgttgcgcc aaccttggtt gcaatggata tggagcacct tttcgtcgtt gacaacggcg
    12121 gtttgcgtac acttaccgga aaagaagggt tacgcttatt cggctatccg gacgattatt
    12181 cgtttgatat tcccaaaaaa gacagatgcg atttattggg taataccgtt gccgtccctg
    12241 tgattaaggc ggtatctgaa agacttctgc atactttata aaccgacagg gataaaatga
    12301 taaaacttac tgcacaacaa atatttgata agttgctgga tgaagaaaaa atcttatcgg
    12361 ccaatggtca aattagattt ttcttaggag atgtggatat tatcgtcaaa caaaaagatg
    12421 ttgtcggcaa catcattcag gaatggctcg gcggatggtt gagaaaaagg gaaattgaat
    12481 ttgatgtttc aaccaatacc caaatgcctc ccgatttctt tttaaataaa aaagaccgca
    12541 gcagagaatt gttggaagta aaggcgttca accgaaatgc ctgcccgggt tttgatattg
    12601 cagattttaa aatgtattct aatgaaatca ttcataagcc ctatatgctg gatgtagatt
    12661 atttaatatt cggttacgat atggacgaca acggcaatgt aaccatcaag gatttatggc
    12721 ttaaaaaagt atggcaaatt accagaagca tggatgggtg ggcaattaat cttcaagtca
    12781 aaaaaggcgt ggtgcataaa atccgcccgg gtgtttggta cagcataaat aaaaagaata
    12841 tgcctatgtt tgaatgcttg gaagattttg tttccgcaat tgaagaaacc gtttatcaaa
    12901 acccggcaac acggcataac gcatccttat ggaaaaagaa atttgaggaa gcttataaaa
    12961 aacactacaa ccgatcgatt tccatacccc gttggcacga aattgcacac aaatacaaaa
    13021 agaaataacc cttcaaccat caacccataa ggaaacttga aatgaccaaa catatcgcca
    13081 tcctccgagg cgacggcatc ggtcccgaaa tcgtcgccga aaccgtccgc gtactcgaca
    13141 aatttatcgc ccaaggcttg gatgccgact acgaatacgc gcctttgggc ggcgaagcct
    13201 acgacgaata cggccatcct tatccagaat ttacgcaaaa cctctgccgc aaagccgatg
    13261 ccgtcctgct tggtgcagtc ggttcgcccc aatacgacaa tctcgaccgt ccgttgcgcc
    13321 ccgagcgcgg cttgttagca attcgtaagg atttgaacct gtttgccaat ttgcgtcctg
    13381 ccgttttata tcccgaatta gccaacgcct ccacgctcaa gcctgaaatc gttgccggtt
    13441 tggatatttt gattgtgcgc gaacttaccg gcgatattta tttcggcgaa ccgcgcggca
    13501 tccgtgtttt ggaaaacggc gaacacgaag gctacaacac catgaaatac agcgaaagcg
    13561 aaatccgccg catcgcccac gtggccttcc aatccgccca aaaacgcagc aaaaaagtct
    13621 gctccgtagg caaagccaac gttttggaaa ccaccgaact gtggcgcgaa atctttgaag
    13681 aaatcggcaa acaatatccc gatgtcgagc tttcccatat gtatgtggac aatgccgcca
    13741 tgcaactcgt gcgcgcgccc aaacagtttg acgtgattgc caccggcaac atcttcggcg
    13801 acatcctctc cgacgaagcc tccatgctga ccggctccat cggtatgctg ccttccgctt
    13861 ctttggacga aaacggcaaa ggcctgtacg aaccgtctca cggctccgcc cccgacatcg
    13921 ccggacaaaa caaagccaac ccgctggcca ccatcctctc gcttgccatg ctgctgcgtt
    13981 acagcctgaa cgacgaagcg cgcgcgcaac aagtcgaaaa cgccgtccaa aaagtgctgc
    14041 aacaaggctt gcgtaccggc gatatttacg aagaaggcac aaaactcgtt tcctgctccg
    14101 aaatgggcga cgcggtactc gccgccttgt aaaaaacaag gggctgtact agattatccc
    14161 taaattccac accaatcccg caggattttt agctgccggg acggtgtgcc gaagttaagt
    14221 cgaaattcgc attccctcaa caacggcggg aaaggtttac gatcgattcc gttgtatttt
    14281 cgcaaggcgc gttttgcctg attc
//
LOCUS       DAXGCP010000060        13772 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.060, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000060 DAXGCP010000000
VERSION     DAXGCP010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13772)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13772)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13772
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.060"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            9..491
                     /locus_tag="ACFJCW_001490"
     CDS             9..491
                     /locus_tag="ACFJCW_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009119391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HFC4151607.1"
                     /translation="MFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTVLAAVHTLYY
                     LACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYILPNHQINRS
                     WLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQEEQAMATLF
                     "
     gene            complement(721..1302)
                     /locus_tag="ACFJCW_001491"
     CDS             complement(721..1302)
                     /locus_tag="ACFJCW_001491"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019957326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HFC4151608.1"
                     /translation="MEHKLPQLPYGPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPAGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPVGGLDLISTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAA"
     gene            1465..2871
                     /gene="dnaB"
                     /locus_tag="ACFJCW_001492"
     CDS             1465..2871
                     /gene="dnaB"
                     /locus_tag="ACFJCW_001492"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HFC4151609.1"
                     /translation="MNDYAAMPPEGREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINEGRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGRLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEYVAIEKHLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPMFIDETPNLTALELRARARRLARRFDGRLGLI
                     VIDYLQLMAASGRSDNRAFELGEISRSLKALAKELQVPIIALSQLSRTVEQRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYVPEEAKIED"
     gene            3026..3691
                     /locus_tag="ACFJCW_001493"
     CDS             3026..3691
                     /locus_tag="ACFJCW_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HFC4151610.1"
                     /translation="MCTRKQQGFTLTELLIVMAIAAIMATIALPNMSGWIASRRIASH
                     AEQVANLLRFSRGEAVRLNLPVYICPTQVKKDGTGNNQCDLGKKEQGMLAFGDKNDNK
                     AYDGDAADVFLRSVVLNDDIKDKRIDYTFNHITFGQTRSTADRVVWTFNQNGTFGYLS
                     DQNLKNDSKFVYSDGYIQIVLTDAKAVSVDEKKFRSAVVLINSSGRVEVCRKNDTRAV
                     CKH"
     gene            3723..4331
                     /gene="pilV"
                     /locus_tag="ACFJCW_001494"
     CDS             3723..4331
                     /gene="pilV"
                     /locus_tag="ACFJCW_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HFC4151611.1"
                     /translation="MKNNDCLRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLINPTIDSDSNKKNYNLYTEPYTPTSSDVDFKFNNL
                     ISKTDLAKAQLDRFGYELKQALPDAVAIHYAVCKDSSGGAPTLSGNTFSSNCDKKANG
                     DTLIKVLWVNDSAGDSDISRTNLEVSGDNIVYTYQARVGGRE"
     gene            4328..5269
                     /locus_tag="ACFJCW_001495"
     CDS             4328..5269
                     /locus_tag="ACFJCW_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HFC4151612.1"
                     /translation="MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSIIVLIAVVSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHIEKDVVFDVAQKNRP
                     FSLKGSSANKLIPIAESLNIGYQGFAQVRPALIFQYGIDDVNASAETTVVSSCGVISK
                     PGKQIPTLEDAKKELKIQNSGKEQNGNIARQRHVVNAYAVGRIAGEEGLFRFQLDDKG
                     KWGNPQLLVKKVKRMDVRYIYVFGCPEDEDAGKEEQFKYTDKFDKSRDAVTPAGVEVL
                     LDSGLDAKIAASSDNSIYAYRINATIRGGNVCANRTL"
     gene            5248..5856
                     /locus_tag="ACFJCW_001496"
     CDS             5248..5856
                     /locus_tag="ACFJCW_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HFC4151613.1"
                     /translation="MRKQNTLTGIPTSDGQRGSALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGEFQVLDLEYTADSKVTFSENCENGLCTAVNVRT
                     NDANEETFDNIVVKGKPTVEAVKRPCSAKSGKNSTGLCIDNQGVEYKKGTGNVSKMPR
                     YIIEYLGVKNGQNVYRVTAKAWGKNANTVVVLQSYVGNNDEQ"
     gene            5858..6331
                     /locus_tag="ACFJCW_001497"
     CDS             5858..6331
                     /locus_tag="ACFJCW_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HFC4151614.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTE
                     MVGINNVLKQFILKNPQDNNQIIKSKLEAFVLGYKMNPKIAKKYSVSVAFANTEKPRA
                     YRLVGVPNAGTGYTLSVWMNSVGDGYKCRNAASAQAYSETLSANTGCEAFSNRKK"
     gene            complement(6401..6709)
                     /locus_tag="ACFJCW_001498"
     CDS             complement(6401..6709)
                     /locus_tag="ACFJCW_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD family protein"
                     /protein_id="HFC4151615.1"
                     /translation="MKNLLSFPSFLLFSCMLAVTCPTRLIGFFALRNRTLSRRAQTIM
                     EAVPGCVLISVIAPYFVSDKPHELIAIALTAFAACRFSMLFTVLIGVGSSGISGWLMA
                     "
     gene            complement(6706..7416)
                     /locus_tag="ACFJCW_001499"
                     /pseudo
     CDS             complement(6706..7416)
                     /locus_tag="ACFJCW_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686491.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
     gene            7582..8034
                     /gene="dut"
                     /locus_tag="ACFJCW_001500"
     CDS             7582..8034
                     /gene="dut"
                     /locus_tag="ACFJCW_001500"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HFC4151616.1"
                     /translation="MNIEVEMKVLDERMADFIPAYATEGSAGLDLRACLDEEVVLQPG
                     GTLLVPTGLAIYLANPAYTAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     GSEPFTVKPFERIAQMVIVPVVQASFKRVEEFVGSSRGEGGFGSTGSH"
     gene            8112..9299
                     /gene="dapC"
                     /locus_tag="ACFJCW_001501"
     CDS             8112..9299
                     /gene="dapC"
                     /locus_tag="ACFJCW_001501"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HFC4151617.1"
                     /translation="MNTLLKQLKPYPFARLREAMQGISAPEGMEAVPLHIGEPKHPTP
                     KVITDALTASLRELEKYPLTAGLPELRQACANWLKRRYDGLTVNPDNEILPVLGSREA
                     LFSFVQTVLNPVSDGLKPVIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWERTKLVFVCSPGNPSGSVPDLDGWREVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQSGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWNDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            9455..10234
                     /gene="yaaA"
                     /locus_tag="ACFJCW_001502"
     CDS             9455..10234
                     /gene="yaaA"
                     /locus_tag="ACFJCW_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HFC4151618.1"
                     /translation="MFFVLSPAKNLNEKDPCPVSEFTQPDLLAESEILMRQLRELAPQ
                     QIAELMRVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLNTNQIQ
                     YLQNHVRLLSGLYGLMRPLDLMQPYRLEMGTSFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AAEHNITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            10317..10407
                     /locus_tag="ACFJCW_001503"
     tRNA            10317..10407
                     /locus_tag="ACFJCW_001503"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10351..10353,aa:Ser,seq:tga)
     gene            10484..10570
                     /locus_tag="ACFJCW_001504"
     tRNA            10484..10570
                     /locus_tag="ACFJCW_001504"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10518..10520,aa:Ser,seq:cga)
     gene            10764..11957
                     /locus_tag="ACFJCW_001505"
     CDS             10764..11957
                     /locus_tag="ACFJCW_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC4151619.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGLALWVYPTGGRSWKL
                     SFVQDGRQQTISLGRYPDFSLTDAREWREEVRRKRAHGENVVNKKVRADFAFEKVARD
                     WFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDTL
                     RKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERVKTKNMTALSPSELPRLIDFLEQ
                     RNEFAVYAGRVHIHPVTRFCIYWLLLTMTRIREAALMEWSELDGEVWRIPAERKKERR
                     GHDVPLSRAMRWVLDQARGLNVNGRFVFESVNFQGHINKESPRVAMRRSGLDTTAHGL
                     RSLARTYLREVLKVYNDVAEKLLAHSLGTRTQTAYNRSELWEERKDAPERWGNDVLRL
                     ADNGK"
     gene            complement(12313..12582)
                     /locus_tag="ACFJCW_001506"
     CDS             complement(12313..12582)
                     /locus_tag="ACFJCW_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151620.1"
                     /translation="MESSDVQGRMETLAFATAPKKGGIRKSGFGRVILIKSGHIVIHN
                     ADGDSFATGYGVIAADIVSPDLKTDFDIFFPPESLLRYKKIGKKK"
     gene            complement(12777..13460)
                     /locus_tag="ACFJCW_001507"
     CDS             complement(12777..13460)
                     /locus_tag="ACFJCW_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2786 domain-containing protein"
                     /protein_id="HFC4151621.1"
                     /translation="MDKEKVLDKIKKCLALGRSANEHEAAQALRQAQALMEKYKVNAE
                     DIALSKVSEQKADRKMAFKLAGWQWGVANMIADIFGCKSYQRGKTMMFYGIGNRAETS
                     AYAFDVVYRQISADRRKFLKTCRAGKPSHRTYLADRFCGGWIASAWETVKKFEMSDEE
                     KAIMDGYKKKEYPDMAEARTRDAKSSILQGSKMEYEALTRGMESGKQVKLHYAVNGTG
                     FVKQIGGQT"
     gene            13585..>13772
                     /locus_tag="ACFJCW_001508"
     CDS             13585..>13772
                     /locus_tag="ACFJCW_001508"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151622.1"
                     /translation="MFPPAEITGRGRVVLQQGFAGFGLYFHGVKFRRLNIPFKLPASC
                     RAVKYARMFAAVSADFGG"
BASE COUNT         3427 a         3126 c         3584 g         3635 t
ORIGIN      
        1 ttttaagcct gttttttatc attagactgt tatttttagc cgtctccatt aaacatgaaa
       61 aagccttgat tgccaaaggg gcgaaacaat acggaaaaac caattccacg gtgcttgcgg
      121 cagttcatac gctttattat ttggcgtgtt ttgtttgggt atggctttct gacactgctt
      181 ttaatggcat atccttgatt ggtacactga cggtgatggc ttcatttgtg atattatcat
      241 tgattattaa gcagttgggg gagatttgga cggttaaaat ctatattttg ccaaatcatc
      301 aaattaatcg ttcgtggttg tttaaaacat tccgccaccc gaattatttt ttaaacatca
      361 tacccgaact gattggcatc gccttattat gtcaagcgtg gtatgtttta ttgattggcc
      421 tgcccattta tttgctggtc ttatttaagc gtatccgaca agaagaacag gcgatggcaa
      481 cactttttta acccgtttca tcaattaaaa atatatcgac aaagagaacc gtctatcaat
      541 taaatccatt cttatcattg gggcaggctt attgtcattg ggcaagccgt gacaaaagcc
      601 cgaacctgca aaacttatct ataaggctgc atcagtgtgt attgaaaccc cgcctttttg
      661 acaacaaatg ccgtctgaag ccttcagacg gcatttgttc ggtttggcaa agccggcggc
      721 ttatgcggca aaacgtttgg cgacttcgtc ccagttgacg atttcccaaa aacctttcag
      781 gtagttgggg cggctgttgc ggtagtcgat gtagtaggcg tgttcccaca cgtcgcaagt
      841 caagagcggc gtgttttcag tggtcagcgg cgtagcggcg ttggaagtgg aaatcaaatc
      901 caatccgccg acaggggttt tcaccagcca cgcccaaccg gagccgaacg taccggccgc
      961 gcaggcattg aacgcttctt ggaatttttc gaagctgccc catttcgcgt cgatggcggc
     1021 ggccagttcg ccggcaggct tgccttggcc tttgggcgtg aaacccagcc agtagaaggt
     1081 gtggttccaa gtttgggccg cgttgttgaa cacgccgccc gaagattttt tcacaatctc
     1141 ttccaaaggc aggttttcaa attcggtgcc tttgatttga ttgttcaggt tggtgatgta
     1201 ggtttgatgg tgtttgccgt agtggaattc caaagtttct ttactcagat gcggggacaa
     1261 tgcgtccggc ccataaggca gttgcggcag cttatgttcc attttgtgct cctaatattg
     1321 ttttaaatgt tgtattttgg cagtgttgct gcaaacgaat cggcagctca cgcattctac
     1381 ctgttttgag tgatggaaac caattaaacc tgctttgcgt tataatagaa gattgcaatt
     1441 tcggcacgac agattggatg taccatgaac gattacgcag ctatgccgcc tgaaggccgt
     1501 gaggtcggcg cattgtcgct gcctccgcat tcgatggagg cggaacaatc cgttttgggc
     1561 ggtttgatgc tggaaaatcc ggcttgggac aggattgccg atgtggtttc gggagaggat
     1621 ttctaccgcc acgaacaccg cctgattttc cgatccattg ccaaattaat caatgagggc
     1681 cgtcccgcag atgtgattac ggttcaggaa gatttgcagc ggaacgaaga attggaagcg
     1741 gcaggcggat ttgaatatct gattacactg gcgcaaaaca ccccgtctgc cgcaaacatc
     1801 cgccgctacg ccgaaatcgt acgcgagcgt tccattatgc gccaactcgc cgaagtgggg
     1861 acggaaatcg cccgcagcgc atacaatccg caaggcaggg acgcggggcg gcttttggat
     1921 gaggcggaaa acaaagtgtt tcaaatcgcc gaaagcaccg ccaaatccaa gcagggcttt
     1981 ttggagatgc ccgatttgct gaaagaagtc gtacagcgca tcgatatgct ttattcgcgc
     2041 gacaatcccg atgaagttac cggcgtaccg acagggttca tcgaccttga taaaaaaacc
     2101 tcgggtctgc agcccggcga cctgattatc gtcgccggcc gcccgtctat gggtaaaacc
     2161 gcgttctcca tcaatattgc cgagtatgtc gccattgaaa aacatttgcc cgtcgccgtt
     2221 ttctcgatgg aaatgggcgg ggcgcaattg gtcatgcgta tgctcggttc ggtcggacgc
     2281 ttggatcaga gcgtcctgaa aacaggcagg ctggaagatg aacattgggg gcgtttgaac
     2341 gaggcagtcg tcaaactttc cgacgcgcct atgtttattg acgaaactcc gaatctgacc
     2401 gccctcgaat tgcgcgcccg cgcccgccgc ctcgcccgcc ggtttgacgg cagattaggc
     2461 ttgatcgtca tcgactacct gcaactgatg gcggcatccg gccgttcgga caaccgcgct
     2521 ttcgagcttg gggaaatttc ccgttccctc aaagccctgg caaaagagtt gcaagtcccc
     2581 atcatcgccc tgtcgcaatt gagccgcact gtcgaacagc gcaccgacaa acgcccgatg
     2641 atgtccgacc tccgcgaatc cggtgctatc gagcaggatg ccgacctgat tatgtttatg
     2701 taccgcgacg aatactacaa ccaggactca cccatgaaag gccttgccga atgtatcatc
     2761 ggcaaacacc gcaacggtcc cgtcggtaaa atcttcctca catggacggg acaattcacc
     2821 aaattcgaca atgctgccta tgttcccgag gaggcaaaga tagaagatta aatggctata
     2881 taaaaattta ttaggcggaa tcaggcaaaa tcgtttaaaa tcatgcttag agattgccct
     2941 aaaaaataaa acgcggtctt gaggcatttt tgcattcagc ccgcagataa ttgaaaaata
     3001 cattacagtt gacgtcctat tgcttatgtg tacacgaaaa caacaaggtt tcacgctaac
     3061 agagctgctc atcgtgatgg ccattgcagc cattatggcg acgatagccc tccccaatat
     3121 gagtgggtgg attgcatcac gccgcattgc cagtcacgcg gagcaggttg ccaacctttt
     3181 gcgtttctcc aggggcgaag ccgtccggct caatctccct gtctatatct gtcctaccca
     3241 agttaaaaaa gacggtacgg gcaacaacca atgcgacctc ggtaagaagg aacaggggat
     3301 gttggctttc ggcgacaaaa acgacaataa ggcatatgac ggcgatgctg cggatgtttt
     3361 tctccgcagc gtggtattga atgatgatat caaggataag cggattgatt acactttcaa
     3421 tcatatcact ttcggtcaaa cacggtcgac tgccgatcgt gttgtttgga cttttaacca
     3481 aaacgggaca ttcggctatt tgtccgatca gaatctcaag aatgattcca aatttgttta
     3541 ttctgacggt tatatccaaa tcgtgttgac agatgcgaag gcggtttctg tcgatgaaaa
     3601 aaaattccgt tcggcggtgg ttttgattaa cagcagcggc agggttgaag tttgtcgtaa
     3661 aaacgatacg cgcgccgtat gcaaacatta atgactgttt tagtcggttt gggaaataaa
     3721 aaatgaagaa taatgattgc ttgcgcctga aaaatcccca gtccggtatg gcgttgatag
     3781 aagtcttggt cgctatgctc gttctgacca tcggtatttt ggcattgctg tccgtacagt
     3841 tgcggacagt cgcttccgtc agggaggcgg aaacgcaaac catcgtcagc caaatcacgc
     3901 aaaacctgat ggaaggaatg ttgatcaatc cgaccattga ttcggacagc aacaagaaaa
     3961 actataatct ttacacggag ccgtacaccc ccacttcctc tgacgtcgat ttcaagttta
     4021 ataatttgat aagtaagacg gatttggcaa aagcccagtt ggacaggttc ggttatgaat
     4081 tgaaacaagc cttgccggat gcggtagcta ttcattacgc cgtctgcaag gattcgtcgg
     4141 gtggcgcgcc gacattgtcc ggcaatactt tttcttcaaa ttgcgacaag aaggcaaacg
     4201 gggatacttt gattaaagta ttgtgggtaa atgattcggc aggggattcg gatatttccc
     4261 gtacgaatct tgaagtgagc ggcgacaata tcgtatatac ctatcaggca agggtcggag
     4321 gtcgtgaatg aaacgtaaaa tgctaaacgt accaaagggc ggttatgatg gtatgaaggg
     4381 ttttaccatt gttgaatttc tggttgcggg cctgctcagt ataattgtcc tgatagcggt
     4441 cgtatcgagt tactttacat cccggaaatt aaatgatgcg gcaaacgagc gtcttgccat
     4501 tcaacaggat ttgcggaatg cggcaacatt aattgtccgc gatgcaagaa tggcggggag
     4561 cttcggttgt ttcaatatgt ctgagcatat cgaaaaggat gttgttttcg atgtggcgca
     4621 aaaaaaccgt cccttttcct taaaagggag cagtgcaaat aaacttatcc ccatagcgga
     4681 atctttaaat atcggatatc agggttttgc ccaggttcgt ccggcattga ttttccaata
     4741 cggaatcgat gatgttaatg caagcgccga gactaccgtc gtcagcagct gtggcgtaat
     4801 atcgaaaccg ggcaagcaaa tccctacttt agaagatgca aaaaaagaat tgaagattca
     4861 gaattctggt aaggagcaaa atggcaatat agcgcgtcaa aggcatgtgg tcaatgccta
     4921 tgcggtcggc aggattgccg gtgaggaagg tttgttccgc ttccaattgg atgataaggg
     4981 caagtggggt aatcctcagt tgctcgtgaa aaaggttaaa cgtatggatg tgcggtatat
     5041 ttatgttttc ggttgtcctg aagatgaaga tgccggcaaa gaggaacaat tcaaatatac
     5101 ggataaattc gacaaatcca gagatgctgt tacgcctgcc ggggtggagg ttttattgga
     5161 tagcggcctt gatgccaaga ttgccgcttc ttcagacaat agtatttatg cttaccgtat
     5221 caatgcgaca atacgcgggg gaaatgtatg cgcaaacaga acactttgac gggaatcccg
     5281 acttctgacg gacagagggg gtccgcactg tttatcgtgc tgatggtgat gatagtcgtg
     5341 gcctttttgg ttgtaactgc cgcccagtcc tacaataccg agcagcggat cagtgccaac
     5401 gaatcagaca ggaaattggc tttgtcttta gccgaggcgg ctttgcggga gggcgaattt
     5461 caggttttgg atttggaata tactgcggat agtaaggtta catttagcga aaactgtgaa
     5521 aacggcctgt gtaccgcagt gaatgtacgg acaaatgatg ctaatgaaga gacttttgac
     5581 aatatcgtgg tgaaaggcaa gcctaccgtt gaggccgtga agcgtccttg ctctgcaaag
     5641 tctggcaaaa attctaccgg cctgtgcatt gacaatcagg gagtggaata taagaaaggt
     5701 acgggaaacg tcagcaaaat gccgcgctat attatcgaat atttaggcgt gaagaacgga
     5761 caaaatgttt atcgggttac tgccaaggct tggggtaaga atgccaatac cgtggtcgtc
     5821 cttcaatctt atgtaggcaa taatgatgag caataaaatg gaacaaaaag ggtttacatt
     5881 gattgagatg atgatagttg tcgcgatact cggcatcatc agcgtcattg ccataccttc
     5941 ttatcaaagt tatattgaaa aaggctatca gtcccagctt tatacggaga tggtcggtat
     6001 caacaatgtt ctcaaacagt ttattttgaa aaatccccag gacaataatc agatcatcaa
     6061 gagcaaactg gaagcatttg tcttaggcta taagatgaat ccgaaaattg ccaaaaaata
     6121 tagtgtttcg gtggcatttg ccaatacgga aaaaccaagg gcatacaggt tggtcggtgt
     6181 tccgaacgcg gggacgggtt atactctgtc ggtatggatg aacagcgtgg gcgacggata
     6241 caaatgccgt aatgccgctt ctgcccaggc ctattcggag accttgtccg caaataccgg
     6301 ctgtgaagct ttctctaatc gtaaaaaata gggttgtttt gccaatgccg tctgaagatc
     6361 aattttcaga cggtattttt tatgggcatt ttgaaatgaa ttatgccatc aaccatcccg
     6421 agatgcctga cgagccgacc cctatcaata cggtaaacaa catagaaaaa cggcaggccg
     6481 caaaggcggt taatgcgatg gcaataagtt cgtgcggctt gtcggataca aaataggggg
     6541 caataacgga aatgaggacg cagcccggca cggcttccat aatggtttgg gcgcggcggc
     6601 ttaaggttcg gttacgcagt gcgaaaaagc cgattaaccg ggtagggcag gtaacggcaa
     6661 gcatacagga aaacagcagg aatgatggga acgacaataa atttttcatt tccgcccact
     6721 ccaaaaataa gcggacaaca ggtcggacag cgtgccggcg ggaacatacc acgcgccgtc
     6781 aacggtcagg taaacggcgg atgcgacaaa caggctgaca aaccaaagtc ttgatacgga
     6841 aaaacttttt cacattcccc tcagtaaaac cagaaatacg gcaggaaacg ccataccgaa
     6901 ccctcaagcg gccacacatt gccgaacacg ggccctactg ccgcgccgag ggcggcaaac
     6961 cctatcaggt aatgtagagg ataaagcatg cgcccatata agaaggcata ttgaatgcag
     7021 gcaaaccggc tgctttccgt ttttggattt cggagaatgc catggcccgg ctttcatcac
     7081 acataaaaag cagcgcgggt acggtttttt tcagcggtat ttctttcatg tgcgtggcaa
     7141 gcgccgcccc catcaggata tgccgcgaat taatcataaa ggttatggtg gcgataagca
     7201 gtatcggcag aggttccgcc cacaggttga ccgtggcaaa ttcggagccg ccggcgaagt
     7261 tcatccccgt catcagcagc atttccagcc gggccatacc tttttgcccg cctgcattcc
     7321 gagtattaat gcccaaggca aaagcccaat cagcatgggc gaactttctt tgatgccgcg
     7381 tatgaattca tcacgtggag aggctgtgtg cgtcatgtta atgtttatat atgaagagac
     7441 ggggcggtat catacacagg cagaatgttt ttgacagtcg aggatggttt caaaacaaaa
     7501 gcagtttgtt gtgtttcagc gtaaacacgg cttgtgtata atctccaatc tttgaaaccg
     7561 gccgtatgca ggagcaggac gatgaatatt gaagtagaaa tgaaagtgtt ggacgagagg
     7621 atggcggatt ttatccctgc ctatgcgacg gagggttctg caggtttgga tttgcgcgcc
     7681 tgtttggatg aggaagtcgt tttgcagccg ggcggaacgt tgcttgtgcc gacaggtttg
     7741 gcaatttatt tggcgaatcc cgcatatacc gccgttttgc tgccccgttc cggcttgggg
     7801 cataaacacg gcattgtttt gggcaatttg gtcggcttaa tcgactccga ttatcaggga
     7861 gagttgaagg tgtcgttatg gaataggggt agcgaaccgt ttactgtcaa gccgttcgag
     7921 cgtatcgcac aaatggttat cgtgccggtc gtacaggcga gcttcaaacg tgtcgaggaa
     7981 tttgtcggaa gcagccgggg tgagggcggc ttcggcagta cgggttctca ctaaagatat
     8041 agaatgccgt ctgaagggca cgtcagcttc agacggcata tcttccgata taccgataac
     8101 cggagaaaat catgaatacc ttactcaagc agctcaaacc atatcccttt gcccgactgc
     8161 gtgaagcgat gcagggcatt tccgcgcctg aaggcatgga agccgtccca ctgcatatcg
     8221 gcgaaccgaa acacccgaca ccgaaagtca ttacggatgc gctgaccgcc tcattgcgcg
     8281 agttggaaaa atatccgctg actgcgggtc tgcctgaatt gcgtcaggcg tgtgcgaact
     8341 ggttaaaacg ccgttatgac ggcttgacgg tcaatccgga taatgaaatt ctgccggttt
     8401 tgggcagtag ggaggcgttg ttttcttttg ttcaaaccgt gttgaaccct gtttcagacg
     8461 gcctaaaacc cgtaatcgtc agcccgaatc ccttttatca gatttatgaa ggtgcgacac
     8521 ttttgggcgg cggtgaaatc cattttgcca attgccccgc gccgtctttc aaccccgatt
     8581 ggcgcagtat ttccgaagag gtttgggaac gcaccaaact ggtgttcgtc tgctcgcccg
     8641 gcaaccccag cggcagcgtg ccggatttgg acggatggag agaagttttt gatttacagg
     8701 ataaatatgg tttcattatt gcctcggatg aatgctattc cgaaatctat ttcgacggca
     8761 acaaaccttt gggctgcctg caggccgccg cacagtcggg gcgaagcagg caaaaactgc
     8821 ttatgtttac cagtttgtcc aagcggtcca atgttccggg cctgcgttcc ggttttgtcg
     8881 ccggcgatgc ggagctgctt aaaaactttc tgctttaccg aacttatcac ggcagcgcaa
     8941 tgagcattcc cgtgcagcgt gccagtattg ccgcctggaa tgacgaacaa cacgttatcg
     9001 acaaccgccg cctgtatcag gaaaaatttg agcgcgttat tcccattttg caacaggtat
     9061 ttgacgtcaa attaccggat gcctcgtttt acatctggtt gaaagtcccc gatggcgacg
     9121 atttggcatt tgcacgaaat ttatggcaaa aagcggctat ccaagtattg cccggacgct
     9181 ttttggcgcg ggataccgaa cagggcaatc ccggggaagg ttatgtccgt atcgctttgg
     9241 ttgccgatgt cgcaacttgt gtcaaagctg cggaaaccat tgtttcccta tatcggtaaa
     9301 gaataaaaaa taccgtccgg acttttcctg acggcttttt ttaatactat caagatgtat
     9361 ttattataac ggtatttaca tcacaatcaa tcggcttgcc tgaggatgct tttaaatcta
     9421 aaattccgac gtttgacact ataccgagcg gattatgttt tttgtccttt cccctgcgaa
     9481 aaaccttaac gaaaaagacc cttgccctgt cagcgagttt acccaacccg atcttttggc
     9541 ggaatctgaa atcctgatgc gccaactgag ggagcttgcg ccgcaacaga tcgccgaatt
     9601 gatgcgcgtt tccgacaaaa tcgcactctt aaacgcgcag cgtaatgcag aatggcacac
     9661 gccgtttacg ccggaaaacg ccaaacaggc ggtctttatg ttcaacggcg atgtttacga
     9721 aggtatggat gcaaacacat tgaataccaa tcaaatacaa tatctgcaaa accatgtccg
     9781 cctgctgtcc ggcttgtacg gtcttatgcg tccactggat ttgatgcagc cctaccgcct
     9841 ggaaatggga acgtccttcg ccaatttgcg cggcaagaat ttgtatgagt tttggggcga
     9901 catcattacc aaccttttaa atgacacgct tgcccaagca ggcagcaata cgcttgtcaa
     9961 ccttgcctca caggaatatt tcaagtccgt caacacgaaa aaacttcggg cgcggctgat
    10021 taccccgata tttaaagacg aaaaaaacgg caaatataaa attatcagtt tctatgccaa
    10081 gcgcgcgcga ggattaatgg tgcgctatgc ggcagaacac aatattaccg atcctgaaat
    10141 gctgaaaaat tttaattacg aaggctacgc atttaatgac gcggcttcca atgaaagcga
    10201 atgggtgttt atgcgttcgg aacaaataaa gtgaaaacaa taaattaagt atttcccaaa
    10261 aaaagtgctt ggcaaaatgt ataaacttca ttattattcc tactcgtcaa gaagacggaa
    10321 gcgtggcaga gcggtttaat gcaacggtct tgaaaaccgt cgagggttga tagccctccg
    10381 tgagttcgaa tctcaccgct tccgccaatt tttgagcgta aaaccaaata aaaatgcaat
    10441 agccgcgaat attgttattt ttatttggtt ttactgcatt atcggaaacg tggcagagag
    10501 gctgaatgca gcggactcga aatccgctga gggtgcaaat cctccgtggg ttcgaatcct
    10561 gccgtttccg ccgcaaagca aaaccgccct gattcagggc ggttcttttt tgttcaggtt
    10621 gtgttaatta ctatataaaa atcatcggtt taccctatca taacgcatca aggcaaatca
    10681 tttgcaatct tgcggcatct tcttattgca tttttttatg gtaatgtata tggtaatttt
    10741 tggataagtg ggaaattacc ataatggcga aaatcattac gccgctgtcg gcaaatcagg
    10801 ttaaaaatgc gaagccgcgc gataagctgt ataagttgtc ggacgggggg ctggctttgt
    10861 gggtctaccc gacgggcgga cggagttgga agctgtcgtt tgtgcaggac ggaaggcagc
    10921 agacaatttc gctggggcgg tatcctgatt tttcgctgac cgatgcgcgg gaatggcggg
    10981 aggaggtgcg ccgaaaacgg gcacacgggg aaaatgtcgt caataagaag gtgcgggcgg
    11041 attttgcttt tgagaaggtg gcgcgtgatt ggtttgtgcg ttggtcgaag gggcggtctg
    11101 aaaagtatgc cggacaggtt atgcggaatt ttgaacggtg ggtttttccg gctatcggca
    11161 atcttgatat ccgtcaagtc aggacggcgg acgtggtcgg ctgcctgcgt gtgatggagg
    11221 cgcgcggtat cgttgatacg ttgcgcaaaa cgaaaaacag tctgaagatg gtgtttgcgt
    11281 ttgcggtcgg ttcgggaatg atggaaatca accctgtcgc gcaaatcggt tcgggtgtgt
    11341 ttgaacgggt gaaaaccaaa aacatgacgg cgttgagtcc gtccgaattg ccgcgcctga
    11401 ttgatttttt ggagcagcgc aatgaatttg cggtttatgc gggcagggtg catatccatc
    11461 ctgtaacgcg gttttgtatc tattggctgc tgttgacgat gacgcggatt cgggaggcgg
    11521 cgttgatgga gtggtcggag ttggacgggg aggtttggcg tatccccgcc gaacggaaaa
    11581 aggagcggcg ggggcatgat gtgccgctgt cgcgggcgat gcggtgggtg ttggatcagg
    11641 cgcgggggct gaatgtgaac gggcggtttg tgtttgaaag tgtgaatttt caagggcata
    11701 tcaataagga aagtccgcgc gtggcgatgc ggcggtcggg gctggatacg acggcgcacg
    11761 gtttgcgctc gcttgcgcgt acttatttgc gcgaggttct gaaggtgtat aatgatgtgg
    11821 cggaaaagct gcttgcccat tcgttgggga cgaggacgca aacggcttac aaccgctcgg
    11881 agctttggga ggagcgtaag gatgcgccgg aacggtgggg gaatgatgtt ttgaggcttg
    11941 ccgacaacgg aaaatgattt ttttgtgtgt tttgcgttat gtggaaatgt agataagaaa
    12001 gctgtttccg cattatgtga aaacgcccta atcgggcgtt tttttattgc tgcaacccta
    12061 atgcttccaa aacttcgcgg gtgtcccata cgggggatgc gagggaggtt cagacggcac
    12121 ggtatccgtc cgtctttttc catacgcagc agtgtcgagt ttgaaatggg gtggttgcgg
    12181 caggttgcgt aggcaatcag ttcgcggatg gtcgggcggt ctatccttgc gcccggtttg
    12241 gtgatgttca tttttttact ctcctgttcg gtttaatctt gcgccgtttt tacggctctg
    12301 tcgtttgtct gcctatttct tcttcccgat ttttttatat cgcaacaagc tttccggcgg
    12361 gaagaatatg tcaaagtctg ttttcaaatc gggactgacg atgtcggcgg caatcacgcc
    12421 gtagccggtg gcaaagctgt cgccatcagc gttatgaata actatatgcc cgcttttgat
    12481 tagaataacg cggccgaatc cggatttccg gattccgcct tttttcgggg cggttgcaaa
    12541 tgccagtgtt tccatccgcc cttgtacgtc ggaagactcc attgcttcgc cgaccgcttt
    12601 tttgacgggc gtttattgaa tacttcgtat tccatgtctt caatcctctt tccgttgatt
    12661 ccgatttgtc cgggtttccg cttttttacg gcttggcatg cggcaattgc gtctttcata
    12721 ttcggcatat cctttcccca atccgccgaa gtttccgcat ccgccgccgt atcgattcat
    12781 gtttgccctc cgatttgttt tacgaagccc gtaccgttca cggcatagtg taacttcact
    12841 tgcttacccg attccattcc tcgggttaat gcctcatatt ccatttttga cccttgtagg
    12901 attgacgatt tcgcatctct tgtccttgct tcggccatat ccggatattc tttctttttg
    12961 tatccgtcca taatggcttt ttcttcatct gacatctcaa attttttgac tgtttcccaa
    13021 gcgctcgcaa tccaaccgcc gcaaaatcgg tcggcaagat aagttctgtg cgagggcttt
    13081 cccgcccggc aggttttcaa aaatttgcgg cggtcggcgg aaatctgacg atagactaca
    13141 tcaaaggcat aggctgaggt ttccgctcga tttccaatgc cgtaaaacat cattgttttc
    13201 ccgcgttggt aagatttgca cccgaatata tcggcaatca tatttgcaac gccccattgc
    13261 cagcctgcca atttaaaagc cattttccga tcggctttct gttcggagac ttttgataag
    13321 gcgatatcct cggcatttac tttgtacttt tccattaaag cctgcgcctg ccttaacgcc
    13381 tgtgcggctt catgttcatt tgccgaccga cccaaagcca aacatttctt gattttgtct
    13441 aagactttct ctttatccat attaaaccct ttaatttgtc cggtatttta atttcgcacc
    13501 cttgcccatt cgtctttcgc tttgctttcg attcggtcgg gccattcggc tagggctgat
    13561 acgcttacga actcggggct ttttttgttt ccgcctgccg agattaccgg ccgcggcagg
    13621 gtagttttgc aacaaggctt tgcaggcttc gggctgtatt tccacggcgt gaaattcaga
    13681 cggcttaata taccgttcaa gctgcctgct tcctgccgcg ccgtcaaata cgcccggatg
    13741 ttcgccgcag tatcggcgga ctttggcggc aa
//
LOCUS       DAXGCP010000061        13760 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.061, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000061 DAXGCP010000000
VERSION     DAXGCP010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13760
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.061"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            96..3296
                     /gene="nalP"
                     /locus_tag="ACFJCW_001509"
                     /pseudo
     CDS             96..3296
                     /gene="nalP"
                     /locus_tag="ACFJCW_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
     gene            3753..4532
                     /locus_tag="ACFJCW_001510"
                     /pseudo
     CDS             3753..4532
                     /locus_tag="ACFJCW_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360927.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
     gene            4895..5385
                     /locus_tag="ACFJCW_001511"
                     /pseudo
     CDS             4895..5385
                     /locus_tag="ACFJCW_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            5422..5688
                     /locus_tag="ACFJCW_001512"
                     /pseudo
     CDS             5422..5688
                     /locus_tag="ACFJCW_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            6190..6813
                     /locus_tag="ACFJCW_001513"
     CDS             6190..6813
                     /locus_tag="ACFJCW_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HFC4151623.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLISPLAHAGAQREETLADDV
                     ASVMRSSVGSVNPPRLVFDNPKEGERWLSAMSARLARFVPDEGERRRLLVNIQYESSR
                     AGLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRY
                     GCTILRHYRNLEKGDIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            6925..8307
                     /locus_tag="ACFJCW_001514"
     CDS             6925..8307
                     /locus_tag="ACFJCW_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HFC4151624.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAIYAAS
                     LPGAEDNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLVVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PMIADVAGVRGLFMLTGILTAISIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTRLGLEKIQHWKVYLPSTITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMHSIWLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFAGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALLQLEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            8311..8835
                     /gene="ssb"
                     /locus_tag="ACFJCW_001515"
     CDS             8311..8835
                     /gene="ssb"
                     /locus_tag="ACFJCW_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HFC4151625.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYDEGYGQNQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
     gene            9208..10131
                     /locus_tag="ACFJCW_001516"
     CDS             9208..10131
                     /locus_tag="ACFJCW_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HFC4151626.1"
                     /translation="MENQRPLLGFALALLAAMTWGMLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWHSFRLLLLGVTGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLVGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRPFKRR"
     gene            complement(10196..11584)
                     /gene="fumC"
                     /locus_tag="ACFJCW_001517"
     CDS             complement(10196..11584)
                     /gene="fumC"
                     /locus_tag="ACFJCW_001517"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HFC4151627.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYRPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHSLGRLNDAL
                     KGLYELALGGTAVGTGLNSHPEYAEIATAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNENCAAGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVGLGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(11728..13707)
                     /gene="tkt"
                     /locus_tag="ACFJCW_001518"
     CDS             complement(11728..13707)
                     /gene="tkt"
                     /locus_tag="ACFJCW_001518"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HFC4151628.1"
                     /translation="MSQLANVIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQTAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     AYPAFEIPQEIYDAWNAKEKGAKLEAGWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DEYVQTALKEVCAKAETVATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLVLHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAAKAED
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGAYVISEAQGNAQAVIIATGSEVGLAVEAQK
                     VLAGQGIAVRVVSMPSTSVFDRQDAAYQAAVLPEGLPRIAVEAGHTNGWYKYVGLNGA
                     VVGINRFGESAPADLLFKAFGFTVDNVVDTVKSVL"
BASE COUNT         3088 a         3615 c         3936 g         3121 t
ORIGIN      
        1 tataattcaa aatataaaaa tgggttacat ctggacatta cgaaattttt attccttcgc
       61 ctgaattcta ttgtcagatt caaagagacc tcatcatgcg aaccacctca accttcccta
      121 caaaaacttt caaaccggct gccatggcgt tagctgttgc aacaacactt tctgcctgct
      181 taggcggcgg cggaggcggc acttctgctc ccgacttcaa tgcaggcggc accggtatcg
      241 gcagcaacag cagggcaacg atagcggaat cagcagcagt atcttacgcc ggtataaaaa
      301 acgaaatgtg caaagacaga agcatgctct gtgccgatcg ggatgacgtt gcggttacag
      361 acagggatgc caaaatcaaa gccccccgaa tctgcatacc ggagactttt caaacccaaa
      421 tgaccaatat taagaatatg atcaacctca aacctgcaat tgaagcaggc tatacaggac
      481 gcggggtaga ggtaggtatc gtcgatacag gcgaatccgt cggcagcata tcctttcccg
      541 aactgtatgg cagaaaagaa cacggctata acgaaaatta caaaaacaaa ttacaaaaac
      601 tatacggcgt atatgcggaa ggaagcgcct gaagacagag gcggtaaaga cattgaagct
      661 tctttggaca atgaggccgt tatagagact gaagcaaagc cgacggatat ccgccatgta
      721 aaagaaatcg gacacatcga tgtggtctcc catattattg gcgggcgttc cgtggacggc
      781 agacctgcag gcggtattgc gcccgatgcg acgctacaca taatgaatac gcatgatgga
      841 accaagaacg agaaataatg tctgcagcca tccgcaatgc atgggtcaag ctgggcgaac
      901 gtggcgtgcg catcgtcaat aacagttttg gaacaacatc gagggcaggc actgccgacc
      961 atttccaaat agccaattcg gaggagcagt accgccaaac gttgctcgac tattccggcg
     1021 gtgataaaac agatgagggt atccgcctga tgcaacagag cgattagggc aacctgtcct
     1081 accacatccg taataaaaac atccttttca tcttttcgac aggcaatgac acacaagctc
     1141 agcccaacac actgacccta ttgccatttt atgaaaagac gctcaaaaag gcattatcac
     1201 agtcgcaggc gtagaccgca gtggagaaaa gttcaatggc tccaaccatt gcggaattac
     1261 tgccatgtgg tgcctgtcgg catcctatga agcaaccgtc catttcaccc gtacaagacc
     1321 gattcaagtt gccggaacat ccttttccgc acccatcgta accggcacgg cggctctgct
     1381 gcagagatac ccgtggatga gcaacgacaa cctgcgtacc acgctgctga cgacggctca
     1441 ggacatcggt gcagtcggag tggacagcaa gttcggctgg gggctgctgg atgcgggtaa
     1501 ggccatgaac ggacccgcgt cctttccgtt cggcgacttt accgccgata cgaaaggtac
     1561 atccgatatt gcctactcct tccgtaacga catttcaggc acgggcggtc tgatcaaaaa
     1621 aggcggcagc caactgcaac tgcacggcaa caacacctat acgggcaaaa ccgttatcga
     1681 aggcggttcg ctggtgttat cggatatgca cgtcaaaacc aaaggtgcac tgatttataa
     1741 cggggcggca tccggcggca gcctgaacag ccacggcatt gtctatctgg cagataccga
     1801 ccaatccggc gcaaacgaaa ccgtacacat caaaaggcgg tctgcagctg ggcgacaaag
     1861 gtacgctgta cacacgtttg ggcaaactgc tgaaagtgga cggtacggcg attaccgacg
     1921 gcaagctgta catgtcggca cgcggcaagg gggcaggcta tctcaacagt accggacgac
     1981 atgttccctt cctgagtgcc gccaaaatcg ggcaggatta ttctttcttc aaaaatatcg
     2041 aaaccgacgg cggtctgctg gcttccctcg acagcgtcga aaaaacagcg ggcagtgaag
     2101 gcgacacgcc gtcctattat gtccgtcgcg gcaatgcggc acggactgct tcggcagcgg
     2161 cacattccgc gcccgccggt ctgaaacacg ccgtagaaca gggcggcagc aatctggaaa
     2221 acctgatggt cgagctggat gcctccgaat catccgcaac acccgagacg gttgaaactg
     2281 cggtcgccga ccgcacagat atgccgggca tccgcctacg gcgcacaact ttccgcgcag
     2341 cggcagccgt acagcatgcg aataccgccg acggcgtacg catcttcaac agtctcgccg
     2401 ctaccgtcta tgccgacagt gccgccgccc atgccgatat gcagggacgc cgcctgaaag
     2461 ccgtatcgga cgggttggac cacaacggta cgggtctgcg cgtcatcgcg caaacccaac
     2521 aggacggtgg aacgtgggaa cagggcggtg tcgaaggcaa aatgcgcggc agtacccaaa
     2581 ctatcggcat tgccgcgaaa accggcgaaa atacgacagc agccgccaca ctgggcatag
     2641 gacgcagcac atggagcgaa aacagtgcaa atgcaaaaac cgacagcatt agtctgtttg
     2701 caggcatacg gcacgatgtg ggcgatatcg gctatctcaa aggcctgttc tcctacggac
     2761 gctacaaaaa cagcatcagc cgcagcaccg gtgcggatga atatgcggaa ggcagcgtca
     2821 acggcacgct gatgcagctg ggcgcactgg gtggtgtcaa cgttccgttt gccgcaacgg
     2881 gagatttgac ggttgaaggc ggtctgcgcc acgacctgct caaacaggat gcattcgccg
     2941 aaaaaggcag tgctttgggc tggagcggca acagcctcac tgaaggcaca ctggtcggac
     3001 tcgcgggtct gaagctgtcg caacccttga gcgataaagc cgtcctgtct gcgacggcgg
     3061 gcgtggaacg cgacctgaac ggacgcgact acgcggtaac gggcggcttt accggcgcgg
     3121 ctgcagcaac cggcaagacg ggtgcacgca atatgccgca cacccgccgg gttgccggtc
     3181 tgggggtgga tgtcgaattc ggcaacggct ggaacggctt ggcacgttac agctacaccg
     3241 gttccaaaca gtacggcaac cacagcggac aaatcggcgt aggctaccgg ttctgacgga
     3301 cagaaaacag acagccgcaa agatcacggt ctttgcggct gtttcttatg aaaagaaaac
     3361 cctattccaa ttgcctgctt ctattgtttc aagacttctt ccaaagattc ggcatcaatc
     3421 agacgtatag cggattaaca aaaatcagga caaggcggcg ggccgcaggc agtacaaata
     3481 gtacggaacc gatccgcccg gtgcttcagc accttaggga accgttccct ttgagccggg
     3541 gcggggcaac gccgtaccgg tttttgttaa tccgccatat tgtgttgaaa caccgcccgg
     3601 aacccgatat aatccgcctt tgaaccatca gtgaaaatct ttttttaacc ggttaaaccg
     3661 aataaggagc cgaaaatgaa tccagcccgc aaaaaacctt ctcttctctt ctcttctctt
     3721 ctcttctctt ctcttctctt ctcttctctt ctcttctctt ctcttccgca gcgcaggcgg
     3781 caagtgaagg caatggccgc ggcccgtatg tgcaggcgga tttagcctac gcctacgaac
     3841 acattaccca cgattatccg aaaccaaccg gtgcaaaaaa aggcacaaca agcacaacaa
     3901 taagcacggt aagcgattat ttcagaaaca tccgtacgca ttccatccac cccagggtgt
     3961 cggtcggcta cgacttcggc ggctggagga tagcggcaga ttatgcccgt tacagaaaat
     4021 ggaacaacaa taaatattct gtgagcataa aagagttgct aagaaacgat aatgccagtc
     4081 ttcctagcgg aaaaggacat cttaacataa aaacccaaaa gacggaacat caagaaaacg
     4141 gcacattcca cgccgtttct tctctcggct tgtcaaccat ttacgatttc gataccggtt
     4201 cccgcttcaa accctatatc ggcgcacgcg tcgcctacgg acacgtcaga catcaggttc
     4261 gttcggttca acaagaaacc acgactgtta ccacttaccc aagtggcggt ggtgcgaaaa
     4321 cttctgttcc atcaaaaatg ccccccaaac ctgcctatca cgaaaaccgc agcagccgcc
     4381 gcttgggctt cggcgcgatg gcgggcgtag gcatagacgt cgcgcccggc ctgaccttgg
     4441 acgccggcta ccgctaccac tattggggac gcctggaaaa cacccgcttc aaaacccacg
     4501 aagcctcatt gggcgtgcgc taccgcttct gattccccga ttccgatgcc gtctgaacct
     4561 tcagacggca tttttaatcg cccgccgttt acaggcacgg ggcaggtgcg gggaaatacc
     4621 cgtaccgcca ttgccgatac accgtaaccc taaaacccgt cattcccgcg caggcgggaa
     4681 tccggacccc cgacgcggcg ggaatctatc ggaaatgact gaaaccccgc gtcctagatt
     4741 cccacttccg tgggaatgac ggttcagcaa gcgtaggtcg gatacttgta tccgacaaaa
     4801 cctttaacat tcccatcatt gcaatccatt gcagcaatgt ccaaaatgtc gaattcaaga
     4861 atccggccta caaaatcatt ccgagcataa tactatgaaa taccgtcgtt tttaccgcaa
     4921 tggcggcact tactttttta cggttgtaac caataaacgg cagaagattt tgaccgatga
     4981 tgcggtgcgt ttggctttac ggcaggcggt aatggcggtg cgcgaacgga atccgtttga
     5041 aattttggca tgggtgttga tgcccgatca tctgcatacc atatggcggc tgccggacaa
     5101 tgattctgct tattcggaac gctggcggca aatcaagcgg cacagccaat atttaatcgg
     5161 cggcaatctc aggctttggc aaaacgcttt tgggaacata ctattcgcgg taaggccgat
     5221 tttgcctgcc attttgatta tctgcatttc aatccggtca aacatggcta tgtaggacaa
     5281 atttccgatt ggcggttttc tacgtttcac cgttatgtca aacagggtat ttatccgcat
     5341 aattggggtg gcggcaatgc ggacttttct attgaatacg attgaagtaa tgtcggattc
     5401 gagaatccga cctacggaaa actgaaagag catcggctgc tggacggcat tatgcgcaaa
     5461 gcccgccgca accgcccgct gacggaggcg caaaccaaac gcaaccgata tttgtcgaag
     5521 acccgttatg tggtcgaaca aagcttcggt acgctgcacc gtaagttccg ctatgcgcgg
     5581 gcagcctatt tcggactgat taaagtgagt gcgcaaagcc acctgaaggc gatgtgtttg
     5641 aacctgttga aagcggccaa caggctaagt gtgcccgctg ccgcctaaaa ggcggcccgg
     5701 atgcctgatt atcgggtatt caagggggat taagggggta tttgggtaga gttaggagtg
     5761 attggtggcg gaaacagccg aaaatctgtg tcagggtttc agctgtcggg agggaaggga
     5821 attttgcaaa ggtctcaaga tatagtggat taaatttaaa ccggtacggc aaggcgaggc
     5881 aacgccgtac cggtttaaat ttaatccact atatttccgc ctgctgccgc ccgaaaagcg
     5941 taatgcgctg atggtgctgc tgcacaatcc ggacgacgga taaccggtga aaacgggaaa
     6001 tgcccgggcg gtgtcgtctg tgcctgtttg gacaagcgtt cttgagggcg gtaaaatcaa
     6061 ggtttgcccg aaaagggcag ggcgatatgc cgcgcttgga ttttgcgcgc ggtttttcgc
     6121 gttggaagca atcatgtctg tttgaatatt taatgccgtc tgaaacgtcc ggacgcaccc
     6181 ccgttcctta tgaaaaaacc gaccgatacc ctacccgtca atctgcaacg ccgccgcctg
     6241 ctgtgtgccg ccggcgcgct gttgatcagc ccgctggcgc acgccggcgc gcaacgtgaa
     6301 gaaacgcttg ccgacgatgt ggcttccgtg atgaggagtt ctgtcggcag cgtcaatccg
     6361 ccgaggctgg tgttcgacaa tccgaaagag ggcgaacgtt ggttgtccgc gatgtcggca
     6421 cgtttggcaa gattcgtccc cgacgagggg gagcggcgca ggctgctggt caatatccaa
     6481 tacgaaagca gccgggccgg tttggatacg cagattgtgt tggggctgat tgaagtggaa
     6541 agcgcgttcc ggcagtatgc gataagcggg gtcggcgcgc gcggcctgat gcaggttatg
     6601 ccgttttgga aaaactacat cggcaaaccg gcgcacaacc tgttcgatat ccgtaccaac
     6661 ctgcgttacg gctgcaccat cctgcgccat taccgaaacc ttgaaaaggg cgacatcgtc
     6721 cgcgcacttg cccgcttcaa cggcagcctc ggcagcaata aatatccgaa cgccgttttg
     6781 ggcgcgtggc gcaaccgctg gcagtggcgt tgattttgaa cccgcgccgc aaccgaaata
     6841 cggcgaatcc tgtataatcc gaaaatctgt tcactggaag ttcagacggc attgcaactg
     6901 ttgatgccgt ctgaaaaatt atttatggca agagacaacc gcatccaaat gtttccgcac
     6961 gaatggcgcg ccagtacgac gctttccggc gtgtacgcgc tgcgtatgct gggtatgttc
     7021 ctcgtgctgc ccgttttggc aatatatgcc gcctcgctgc ccggtgcgga agacaataaa
     7081 acgctggtcg ggctggcaat gggcatttac gggctgacgc aggcattgct gcaactgcct
     7141 ttgggtatcg cttccgacaa gttcgggcgc aagaaaacca tttatgtcgg gctggtcgtg
     7201 tttgccgccg gcagcttcct tgccgccgcc gccgatacgc tgcccatgct ggttgccgcg
     7261 cgcgccatac agggcgcggg ggcggtcagt gctgccgtaa ccgcgctgct tgccgacttg
     7321 acgcgcgacg gcgtgcgtac ccgcgcgatg gcgatgatcg gtttgagtat cggtctgacg
     7381 ttttcggtca gcctggtggt tgcgccgatg attgccgatg tggccggcgt tcgcggactg
     7441 tttatgctga ccggcattct gaccgccatc agcatcggcg tagtggcgtg gatgactcct
     7501 gatcccgaag tttccaagct gcatgaggac acgcaggcgc agccttcgcg cataggagaa
     7561 gttttgaaaa accgtaggct gctgacgctc gatttcggca ttttcgccct gcacgccgcg
     7621 caaatggcat tgtttaccgc gctgcctttc gcgatgaccc ggctcggttt ggaaaaaatc
     7681 cagcattgga aagtatatct gccctcgacc attacgggct tggtggtgat ggttccgctg
     7741 attatcgtcg gcgaaacgcg caacaagctc aaacaggttt ttgttttggg catcgtctgc
     7801 atcgcggcgg cgcagcttgg tttgctgtcc ggaatgcact cgatttggct gattaccgct
     7861 tatctggttg tttactttat cggttttaat gtgttggaag cgagcctgcc gtctatggtt
     7921 tccaaaatcg cgccgtccga cctgaagggt acggcgatgg gcgtgtacaa cacgatgcag
     7981 tcgctcggac tgtttgccgg cggcgcggca ggaggcttgc tgtttcaaaa atacggcttt
     8041 gccggcgtgt ttgccttttg cagcatattg atgctgctgt ggctggtgat tgccgtttta
     8101 tcgcccgcgc ccaagcccgt caaaaacctc agttaccctg tcggcggcgt gtggcagggc
     8161 aatcgggacg gtttgcaacg cgccctgttg cagttggaag gcgtggaaga catcggtttc
     8221 agtttcgacg ggcagaccgt ctatcttaaa gtgttgcaga agggtttcga tcaggctgcc
     8281 gctgaaaaaa tcattacagg agtttaaaaa atgtcattga acaaagtcat ccttatcggc
     8341 cgcctcggac gcgatcccga agtgcgctat atgcccaacg gcgaggcagt gtgtaatttc
     8401 agcgtcgcca ccagcgaaac ttggaacgac cgcaacggcc agcgcgtaga gcgcaccgaa
     8461 tggcacaaca tcacgatgta ccgcaaactg gcggaaattg ccgggcaata cctcaaaaaa
     8521 ggcgggctgg tttatctgga aggcagaatc caaagccgca aataccaagg caaagacggc
     8581 atcgaacgca ccgcttacga tattgtcgcc aatgaaatga aaatgttggg cgggcgcaat
     8641 gaaaacagcg gcggcgcgcc ttacgatgaa ggttacggtc agaatcagga ggcttaccaa
     8701 cgccccgctc agcaaagccg gcagcccgct cccgacgcgc cgtcccatcc ccaagaagca
     8761 cccgccgcgc cgcgccgcca acccgtgccg gccgccgccc cggtcgagga cattgacgac
     8821 gacatcccgt tctgaatttt acggccggac atcctcgcgg agggaagtca taaaggacgg
     8881 aaaaacctta aaccttacgg ggcaaggttt ctcttttttg catttgggcc ggcttgttgc
     8941 cgccccctgc gttgggcgta acgttgcgat tgcgccgttc gggcgttttg aggcaagcga
     9001 tgcctgccgc actcccccgc tgttttcaga cggcatttta aaattgaggc ggtgttttca
     9061 aatagtgcga agcaatagtc gggcttcagc cagtttgttt gaaatcaaag ggttggaatc
     9121 aaacgccaaa cgcttgaacc atcattgccc gatgcggcaa accggcatcg tccggcaata
     9181 cggttgttta aaaataggga aatcaggatg gaaaaccaaa ggccgctcct aggcttcgcg
     9241 ttggcacttt tggcggcgat gacgtggggg atgctgccga ttgccgtgcg gcaggtattg
     9301 aagtttgtcg atgcgccgac gctggtgtgg gtgcgtttta cagtggcggc ggcggtattg
     9361 tttgttttgc tggcattggg cgggcggctg ccgaagcggc gggatttttc ttggcattca
     9421 ttcaggctgc tgctgctcgg cgtgacgggc atttcggcaa actttgtgct gattgcccaa
     9481 gggctgcatt atatttcgcc gaccacgacg caggttttgt ggcagatttc gccgtttacg
     9541 atgattgttg tcggcgtgtt ggtgtttaaa gaccggatga ctgccgcgca gaaaatcggt
     9601 ttggttttgc tgcttgtcgg tttgcttatg ttttttaacg acaaattcgg cgagttgtcg
     9661 ggtttgggcg cgtatgcgaa gggcgtgttg ctgtgtgcgg caggcagtat ggcctgggtg
     9721 tgttatgccg tggcgcaaaa gctgctgtcg gcgcaattcg gtccgcaaca gattctgctg
     9781 ttgatttatg cggcaagtgc cgccgtgttc ctgccgtttg ccgaaccggc acacatcgga
     9841 agtttggacg gtacgttggc gtgggtttgt tttgcgtatt gctgcttgaa tacgttaatc
     9901 ggttacggct cgttcggcga ggcgttgaaa cattgggagg cttccaaagt cagcgcggta
     9961 acaaccttgc tccccgtgtt taccgtaata ttttctttgc tcgggcatta tgtgatgcct
    10021 gatacttttg ccgcgccgga tatgaacggt ttgggttatg tcggcgcact cgtcgtggtc
    10081 gggggtgcgg ttacggcggc ggtgggggac aggccgttca aacgccgcta gttcgcaggc
    10141 aacggaaaat gccgtctgaa cgaggcttca gacggcattt tatttgaggg aaggattagc
    10201 gcggatgaac catatcggca gggacgacca gttcgtcaaa ctcttcgccc gtcagcaagc
    10261 ccaacccaac ggcagtttcg cgcagcgatt tatcgttttt gtaggcggtt ttggcgactt
    10321 tggcggcgtt ttcgtagccg attttgcggt ttaacgcagt aaccagcatc agggaatggt
    10381 gcaggaaata gtcgattttt tccggtacgg gttcgatgcc ggcggcgcag ttttcgttga
    10441 agctgttgca cgcgtcgccc aagaggcgga tggattgcaa gaggttgtaa gcgataacgg
    10501 gcatatagac gttcagctcg aaattgcccg acgcgcccgc cataccgatg gtaacgtcgt
    10561 tgccgaacac ttggcagcac accatcgtca tcgcttcgca ttgggtcggg ttgactttgc
    10621 ccggcataat ggacgaaccc ggttcgtttt cggggatttt gatttcgccc aagccgcagc
    10681 gcgggccgct tgccagccag cggatgtcgt tggcgatttt gttcaggctt gccgccagcg
    10741 ttttcaatgc gcccgaagcg gcaacggcgg catcgcgtcc gcccaaggct tcaaatttgt
    10801 tcggcgcgct gacaaacggc aggccggaca gttcggcgag tttggcggtg gctatttcag
    10861 cgtattcggg atggctgttc aaacccgtac cgaccgccgt tccacccaag gcgagttcgt
    10921 acaaaccttt gagcgcgtcg ttcagacggc ctaagctgtg gtcgagttgg gaaacgtagc
    10981 cggaaaattc ttgtcccaaa gtcagcggcg tcgcatcctg caagtgggta cggccgattt
    11041 tgacgatggg ggcgaaggct tgggcttttt tgtccaatgt atcgcgcaag gcttttaccg
    11101 ccggaataag gtggcggttg atttcaatcg cggcggcgac gtggatggcg gtcgggaacg
    11161 cgtcgttggt cgattgcgcg tggttcacat ggtcgttggg gtggacgggc cggtacgccg
    11221 ccaaacccgt acctgcaatt tcgttggcgc ggtttgccag cacttcgttc atgttcatat
    11281 tggactgcgt accggagccg gtctgccaaa ccactaaggg gaactgcccg tcgagcctgc
    11341 cgttcagtac atcatccgcc gcctgcgtaa tcaaatccgc ctgttcgggc ttaatcctgc
    11401 cgagggaaac attggtcgcg gcggcggctt ttttcaccaa cgccaaagcg taaatcagcg
    11461 gctgcggcag ggtttcgccg ccgattttga aattgttgcg gctgcgctgg gtctgcgcgc
    11521 cccaataggc ttcggacggg acttcgacat tgcccatcgt gtcgtgttcg gtgcgggtgt
    11581 tcatacgttt ctccttttga aatgtgaata agagtgattc gcaaatatta taatggagat
    11641 tggcggaatg aggaagcatc aaggcgggag ggcaaaaaaa tgccgtctga aaagcattca
    11701 gacggcattt gatgcggcgg ctgaggttta cagcacggat ttcaccgtat caaccacatt
    11761 gtccacggta aagccgaatg ctttgaacag cagatcggca ggggcggatt cgccgaagcg
    11821 gttgatgccg acgactgcgc cgttcagtcc gacatatttg taccagccgt tggtgtgtcc
    11881 ggcttctacg gcgatgcgcg gcaggccttc cggtaggacg gcggcttgat aggcggcgtc
    11941 ttggcggtcg aagacgctgg tggacggcat ggaaacgacg cgcacggcaa taccttgtcc
    12001 tgccaatact ttttgcgctt ctacagccaa tcctacctcg gaaccggtgg caatgatgac
    12061 ggcttgggcg ttgccttggg cttcactgat tacgtaagca ccgcgtttga tgtcgttcag
    12121 ttgttgctcg ctgcgtgctt ggaatttcag gttttgacgg ctgaaaatca ggcaggacgg
    12181 gtggtcttcg gcttttgccg cttctgccca agcgaccaga gattctgcgg tgtcgcacgg
    12241 ccgccatacg tccatattcg gaatcaggcg cagggtggcg gtttgctcga taggctggtg
    12301 ggttgggccg tcctcgccca aaccgatgga atcgtgggtg aatacgaaga cggggttgat
    12361 tttcatcagt gccgccatgc gtaaggcgtt gcgttcgtat tcgctgaaca tcaggaaagt
    12421 cgcgccgaag ggttttacac cgccgtgcaa taccaaaccg ttcataatcg cacccatacc
    12481 gaactcgcgc acgccgtagt ggatgtagtt gccgcctttg tcgcgggtaa cggagacgct
    12541 gtttgaccag tcggtcaggt tggacggggt caggtcggca gaaccgccca ccagttcggg
    12601 cagctctttt gccaagattt cgatgctgtt ttggctggct ttgcgggtgg cgacggtttc
    12661 cgctttggcg cacacttctt tcaatgccgt ctgaacgtac tcgtcaaagt tttccggcag
    12721 ctttttatcc atgcggcgca cgaattctgc ggcttcggca ggatatttgg cttgatattg
    12781 cgcgaacagt tcgttccatc cggcttccag tttcgcgcct ttttctttgg cattccacgc
    12841 atcgtaaatt tcttgcggga tttcaaacgc aggataagcc caacccaaat gtttgcgcgt
    12901 ggcttcgatt tcgtccgcac ccaaaggcgc gccgtgggtt ttgtggctgc cttctttgtt
    12961 ggcgctgcct ttgccgatta aggttttgca gcagatgatg gacggcttgc cggtttcggc
    13021 gcgggcggct tcgatggccg tctgaatggc ggcggtgtcg tggccgttta cgttgggaac
    13081 gacgtgccag ccgtagcttt caaagcgttg cgggatgttt tcggtaaacc agccgtccac
    13141 tttgccgtcg atggagatat tgttatcgtc atacaaaaca atcagtttgc ccaagcccaa
    13201 ggtgccggcg agtgagcagg cttcgtgcga tacgccttcc atcaggcagc cgtcgcccat
    13261 aaagacgtaa gtgtagtgat cgacgatgtt caaaccgtct ttattaaatt cggcggcaag
    13321 gattttttct gccaatgcca tgcccactgc gttggcaata ccttgcccca acgggccggt
    13381 cgtggtttcc acgccgtcgg tgtagccgta ttcgggatgg ccgggggttt tgctgtgcag
    13441 ctggcggaag tttttcagat cttcaatgct caggttgtag ccggtcaggt gcagcaggct
    13501 gtacaacagc atagacgcat gaccgttgga gaggacgaag cggtcgcggt tgtagaattt
    13561 gggattggcg ggattgtgat tgaggaattt cgtccacaat gtttccgcca tttccgccat
    13621 acccataggc gcgccggggt ggccggaatt ggctttttga acggcatcgg ccgagaggaa
    13681 gcggattacg tttgccagtt gagacatttt gtattttcct tgctggtgtt tcggataagt
    13741 ggataatcgg aaggcgttga
//
LOCUS       DAXGCP010000062        13605 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.062, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000062 DAXGCP010000000
VERSION     DAXGCP010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13605)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13605)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13605
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.062"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(188..397)
                     /locus_tag="ACFJCW_001519"
     CDS             complement(188..397)
                     /locus_tag="ACFJCW_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraR/DksA family transcriptional regulator"
                     /protein_id="HFC4151629.1"
                     /translation="MTDFADRASEREAEFLVEALAKHQPPSENTAGFSHCEDCGDPIP
                     EAKRKAVRGCTRCVVCHEYIQLKTK"
     gene            complement(390..611)
                     /locus_tag="ACFJCW_001520"
     CDS             complement(390..611)
                     /locus_tag="ACFJCW_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151630.1"
                     /translation="MPSDTPIKTVAVAEIPPVPSGLLVEYERPERPAGGSPEQLLNHA
                     VRYGGYYRKLEIQIEGWQNWHTKGRLKHD"
     gene            complement(685..972)
                     /locus_tag="ACFJCW_001521"
     CDS             complement(685..972)
                     /locus_tag="ACFJCW_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151631.1"
                     /translation="MIEFVRAKKRLLWAFVLLLAWACGYRYAADKAEAEQTALIAAYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQSTDLAAALSELDKTRNTLQE"
     gene            complement(1092..1730)
                     /locus_tag="ACFJCW_001522"
     CDS             complement(1092..1730)
                     /locus_tag="ACFJCW_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151632.1"
                     /translation="MTIQSKHYEIRPKQAFITPENVSIPADLCCEVQVRSLLQHAYAE
                     LVHDNIYKPDGNVPKQAEREVAKSMALMETTDDLFSRTLAILKEANQPQEELLPQLSQ
                     LYQKEIGLVPEVDKKTNMIFLETFQSSISQSSILSDIRSLLNEKKYIAKRIKENAEEM
                     YFFSQPAALLVYWLIEKVGADEVWKKWPLPAYNKNLKFICTDLDKQPSHELF"
     gene            complement(1727..2101)
                     /locus_tag="ACFJCW_001523"
     CDS             complement(1727..2101)
                     /locus_tag="ACFJCW_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151633.1"
                     /translation="MSDIDDFKSYLESHQAAFSAWGRFVAEEIQNQLSNVISPVPVAN
                     FLKIEAKPGVKEISSALAKIGRKNYTSPQTQMTDLVGVRFVALLAEHIQIVCEIIESS
                     SQWNAKVSKDFADEIQQNPKAI"
     gene            complement(2098..3138)
                     /locus_tag="ACFJCW_001524"
     CDS             complement(2098..3138)
                     /locus_tag="ACFJCW_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009295 - nucleoid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HFC4151634.1"
                     /translation="MKKIITHRIYPKNENRERVEPKISTHLIDLPITARRTLETRLTK
                     ALGNKSHGIEMSVVNTAENSFFQIAAAIQLKEEAEFIEDSAQFAHMLTDAQLNTNAPG
                     GILLVLKGRVGDTGKPFLCVIKAEPQDGFRTKEEDDFITIEFLEELLLTDSARLFKIG
                     FLVAETVRPLEQIQSGNYRAFLYDHLMTQTETRPAASYFYQVFLGMSIAASSRKLTQD
                     FFEWARNFIDNSDLSDDAKLDAHEALRVTLKSAEATISVNNFAQNHLPQEKRTAYTEF
                     MVEKDFPQNAVSKDIEYIKTRLRKRRSYGFSNGVVILTPPEHTQDYMEIAPTEDGEYT
                     VVLIKGQLQQQK"
     gene            complement(3372..3752)
                     /locus_tag="ACFJCW_001525"
     CDS             complement(3372..3752)
                     /locus_tag="ACFJCW_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4151635.1"
                     /translation="MEKTSLFGKRLKEERIKLGLNQAEAAEKCGFSREMWGKWERGEN
                     RPSSEKLFSFSKIGIDIDYVMHGRRGETAAMPSESLSAEEKELLALFRQLGSGSRKEL
                     ADYAAFKLVVEKKAQTALGKVSNG"
     gene            3961..4254
                     /locus_tag="ACFJCW_001526"
     CDS             3961..4254
                     /locus_tag="ACFJCW_001526"
                     /inference="COORDINATES: protein motif:HMM:TIGR04111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HFC4151636.1"
                     /translation="MFIVQRGLKLNTLYHTKGINNIEKPLNFKPIPYLQTRGSTAVWF
                     KRNGVCKTHRAKHFNLERTAVEHPLRGKLKGNFGKSHEAAVKLGLKEDADGDE"
     gene            4241..4525
                     /locus_tag="ACFJCW_001527"
     CDS             4241..4525
                     /locus_tag="ACFJCW_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HFC4151637.1"
                     /translation="MATSKKAQRLLRVFLAMDAHPVIGISNKELSDGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRKQQERLNARLQELENRIY"
     gene            4562..4744
                     /locus_tag="ACFJCW_001528"
     CDS             4562..4744
                     /locus_tag="ACFJCW_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151638.1"
                     /translation="MATEILGHTVGVTANELAIHSMEVMDKFSGGEAYNETVWIERGR
                     FADAKRWKGCLSRDAR"
     gene            5436..7202
                     /locus_tag="ACFJCW_001529"
     CDS             5436..7202
                     /locus_tag="ACFJCW_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HFC4151639.1"
                     /translation="MIERLKAVENQAEAMGRGARSAYLKQQAQELGISLATLYRKLEA
                     VSVKPTRKRRSDAGKTELKPEEAKLISAVLAEAMRRNGKRLMPVRQAVEMLRANGKIE
                     AARIDGETGEVIPLSENTITRALREYKLHSDQLLQPDPVSRMKSEHPNHCWQIDPSLC
                     VLYFLPRQGKDTGLRVMKEEEFYKNKPKNVVKIENDRVWRYTGTDHASGTISVRYYFG
                     GETSANLCDFFIYMMQAKKDIGKDPFRTVPRMVMLDPGSANTSAAFKNLCKPLDVHVQ
                     INKPGNPRAKGQVEKANDIVETAFESGLRFTEVHDIDQLNALSERWMRYYNGTQKHSR
                     HGMTRYQAWNKIKPEQLILPPPAEYCRELAVSAPKEAKVSADLEIRFGGRVYSVKGIK
                     GILVGQKVLVGKNPWEANGARVATYDAEGNEVWVSVPEVVFDEMGFKADAAVIGAEYK
                     APADTDAQRHRKELDKLAMGAETLEPAAAKRKGKAVPFGGKIDPYKHQEDTLAASNTL
                     FMPKQGQQMDYNKMEVAEQVLSKVEIAKRLKPRVEADGGDWKQAVSVILKHYPEGVTE
                     GRLEEAFERTRTRCRLKLLKTG"
     gene            complement(7243..7431)
                     /locus_tag="ACFJCW_001530"
     CDS             complement(7243..7431)
                     /locus_tag="ACFJCW_001530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151640.1"
                     /translation="MPSEFFQTAFLPTRFACRVGLPVRPEASDKQGGFYSGLNLNRYG
                     VASPCRTICTVCGFAALS"
     gene            complement(7541..8929)
                     /locus_tag="ACFJCW_001531"
                     /pseudo
     CDS             complement(7541..8929)
                     /locus_tag="ACFJCW_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
     gene            9047..9123
                     /locus_tag="ACFJCW_001532"
     tRNA            9047..9123
                     /locus_tag="ACFJCW_001532"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9081..9083,aa:Arg,seq:acg)
     gene            9141..9215
                     /locus_tag="ACFJCW_001533"
     tRNA            9141..9215
                     /locus_tag="ACFJCW_001533"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9174..9176,aa:Glu,seq:ttc)
     gene            9378..9494
                     /locus_tag="ACFJCW_001534"
                     /pseudo
     CDS             9378..9494
                     /locus_tag="ACFJCW_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9652..10827
                     /locus_tag="ACFJCW_001535"
     CDS             9652..10827
                     /locus_tag="ACFJCW_001535"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HFC4151641.1"
                     /translation="MQNIFDPLIIRGKSLIPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKDVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKNLGLEGEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLASAETEKVV
                     EFMSVAGLPARGIRTKFLDSYIRREGKLQANAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKNQLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(11169..11717)
                     /locus_tag="ACFJCW_001536"
     CDS             complement(11169..11717)
                     /locus_tag="ACFJCW_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HFC4151642.1"
                     /translation="MSQNNPIKPWYKHVWPWVLMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLPPANHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(11720..13216)
                     /gene="ccoG"
                     /locus_tag="ACFJCW_001537"
     CDS             complement(11720..13216)
                     /gene="ccoG"
                     /locus_tag="ACFJCW_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HFC4151643.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKVKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     AAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPSGLI
                     RYTTESALEHEYAEKDIKKRLLRPRVAGYGAVLAVVVAAFLVGLSTRKMVEVDILKDR
                     GVMVRENAKGWLENAYSLRIINNSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETI
                     TLPVQVSTIPEYADKGSHPIEFIFQYRESGASDGKPVVLEEDATFIGE"
BASE COUNT         3589 a         3415 c         3276 g         3325 t
ORIGIN      
        1 cccgccccgg ctcaaaggga acggttccct aaggtgccca agcaccgggc gaaccggttc
       61 cgtaccattt gtactgcctg cggcccgccg ccttgtcctg atttttgtta atccgctatg
      121 gtttaaggct ttgtttctta agtccgcaga gtatgccatg gttagacctt caacgtcgag
      181 tgttgtacta ttttgttttt aattgaatat attcgtggca gacaacacag cgcgtacagc
      241 ctcggacggc ttttcgcttt gcttccggta tcgggtcgcc gcagtcttcg caatggctga
      301 agccggcggt gttttcagac ggcggttggt gtttcgccaa ggcttccacc agaaattcgg
      361 cttcgcgttc ggatgcgcgg tcggcaaaat cagtcatgtt tcagacggcc tttcgtgtgc
      421 cagttctgcc agccctcaat ttggatttcg agctttcggt agtatccgcc atagcggacg
      481 gcgtggttta aaagttgttc gggagagccg ccggccggac gctcggggcg ttcgtattcg
      541 accagcagtc cggaaggaac gggcggaatt tccgcgacgg caacggtttt aatcggggta
      601 tccgaaggca cggttgtaga ggtgcaggct gttcgtgcca aggccgttaa aacggttgcc
      661 gtctttgtct gccgcttcac gggtttactc ctgtaaggtg ttgcgcgttt tgtccaattc
      721 gctcagggcg gccgccaaat ccgtgctttg tttttgggaa aagtcgtacc accgctgcct
      781 ttcgtcctgc gcttttttaa gctgcaaggc gtattgttcc gccgcaacca tagaagaatg
      841 ccgataggcg gcaatcaggg cggtttgttc cgcttcggcc ttgtcggcag cgtaccggta
      901 gccgcacgcc cacgcaagca aaagtacaaa tgcccaaagc agccgttttt tggctcggac
      961 aaattcaatc attgccgccc ccttcctgat ttgcggattt tttgatttcc gccagctgcg
     1021 gaactgccgc tatgccgcgt ttgattaagg cataattagg aaaggccgtc tgaatgggct
     1081 tttaaagggg gttaaaagag ttcatgggat ggttgcttat ccaaatcagt acaaatgaat
     1141 ttcaggtttt tgttgtatgc aggcaaaggc cattttttcc atacttcatc tgcaccaact
     1201 ttctcaatca gccaatagac caacaaagct gctggctgac tgaaaaaata catttcttca
     1261 gcattttctt ttatccgctt ggcaatatat ttcttctcat tcaaaagtga acggatgtca
     1321 gaaagaatac ttgattggga aatgctggat tgaaatgttt ctagaaaaat catattggtt
     1381 tttttatcaa cttcaggaac aagccctatt tccttttgat aaagctgtga taattgggga
     1441 agaagctctt cttgtggttg atttgcttct ttcaaaattg ccagagtacg actaaataag
     1501 tcatctgtag tttccatcaa agccatgctc ttcgcgactt cgcgctctgc ttgctttgga
     1561 acattgccgt caggcttgta tatattgtca tgaaccagct ctgcataagc atgttggagt
     1621 aaagaacgca cctgaacttc acagcacaaa tcagcaggga tgctgacatt ttcgggtgta
     1681 atgaatgctt gtttaggacg aatctcgtaa tgtttggatt gtatagtcaa attgctttgg
     1741 gattttgctg aatttcatct gcaaaatctt tcgaaacttt agcattccac tgagatgagg
     1801 attcaatgat ttcacaaact atttgaatat gttccgcaag caatgccaca aaacgtacgc
     1861 cgaccaagtc agtcatttga gtttgaggtg aagtgtaatt ttttcggcca atcttggcta
     1921 gagctgaaga aatctctttg actccaggct ttgcttcaat ttttagaaaa ttggcaaccg
     1981 gaacaggaga aatgacattg gataattgat tttgaatttc ttcagccaca aatctacccc
     2041 aagcggaaaa tgccgcttgg tggctttcta aatagctttt gaaatcatca atatcactca
     2101 tttttgttgt tgtaactgtc ctttaattag gacaacagta tattccccat cttccgttgg
     2161 cgcaatttcc atatagtcct gagtatgctc gggaggagtc aagataacta caccgttact
     2221 aaatccgtaa gacctccgtt tgcgtaaacg agttttaata tattcaatat ctttacttac
     2281 ggcattttga ggaaaatcct tttccaccat aaattctgta taagctgttc gtttttcttg
     2341 aggtaaatga ttttgggcaa aattatttac actaatggtt gcttccgcac ttttcaatgt
     2401 aacgcgcaat gcttcatgcg catctaattt tgcatcatca cttaaatcag agttatcgat
     2461 aaaattgcgt gcccactcaa aaaaatcctg cgtcaattta cgggaagaag cagctatact
     2521 catacccaag aatacttgat agaaatagga agctgccggt ctagtttccg tttgtgtcat
     2581 cagatggtca tacaaaaaag ctcgataatt cccagattgt atttgctcta gcggccttac
     2641 tgtttcagcc accaaaaaac ctatcttgaa taatcttgct gaatcggtca gtaataattc
     2701 ttctaagaat tcaatcgtga taaagtcatc ctcttctttg gttcggaacc catcttgagg
     2761 ttcagcctta attacacata aaaacggctt accggtatct ccaaccctac cttttaaaac
     2821 caacaaaata ccacccggtg catttgtatt cagttgtgca tcggtcaaca tgtgggcaaa
     2881 ttgtgcggaa tcctcaataa actctgcttc ctctttgagt tgtatggctg ccgctatctg
     2941 aaaaaaacta ttttcagccg tattgacaac agacatttca atgccatgag atttattacc
     3001 caaagctttg gtcagcctgg tttccaatgt tcttcttgcc gtaataggca aatcaatcaa
     3061 atgtgtactg attttaggtt ctacacgctc tctattttca tttttcggat aaatacgatg
     3121 ggtaataatt tttttcaatt accagccctt caaaagagta attcgtttct gtcatcattt
     3181 ttcctattgt aagttaatta aggtcttttg aaatctgaac cacttggccg atgacctgaa
     3241 tatcggggtg gtttttaata cgctttaaaa tgcacggccg ctcctattgc ttaatatctg
     3301 tttcagaaca ccggagcagc ccgactgtca gagtgtccca aatgccgtct gaaatcttca
     3361 gacggcattt tttatccgtt gctcacttta ccaagcgcag tttgggcttt tttctctacc
     3421 accagcttaa aggcggcgta gtcagcaagc tctttgcggc tgccgctgcc gagctgacgg
     3481 aacagggcaa gcagttcttt ttcttcagca ctcaaggatt cagacggcat ggcggctgtt
     3541 tcgccgcgtc tgccgtgcat gacgtaatca atatcgatgc cgattttaga aaaagagaat
     3601 aatttttcac ttgatgggcg attttcacca cgctcccact ttccccacat ctcacgagaa
     3661 aaaccacatt tttcagcagc ttctgcttgg ttcaagccta atttaattct ttcttctttc
     3721 aatcgcttac caaaaagaga agttttttcc acttaaattt ccttgaaaag agaaatattt
     3781 ttctcataat tcacacatca agacatgaaa caccctaaat catcacgaaa aaggacgaaa
     3841 aaatgaacac tttgaaggct catgcgcgac agctcatgat ggatcacata cacccggcta
     3901 cgggaaaaag cttgtttatt ttaaaacaag ccaagaccct gctgctgcac aacagaccgg
     3961 atgtttatcg tgcaaagagg cctaaaacta aacacattat accacacgaa aggcataaat
     4021 aatattgaaa aacctttaaa tttcaagcct attccctatc tgcaaacgcg cggcagcacg
     4081 gccgtgtggt ttaagcgcaa cggcgtgtgc aagacgcacc gggcgaaaca tttcaatttg
     4141 gagcgcaccg cggtggaaca ccccttgcgc ggcaagctga aaggcaattt cggcaaaagc
     4201 cacgaagcgg cggtaaaact tgggctgaag gaggatgcgg atggcgacga gtaaaaaggc
     4261 gcagcggctg ttgcgggtgt ttttggcgat ggacgcgcat ccggtaatcg gcatcagcaa
     4321 taaggagctt tcagacggcc tggggctgac gccatcacaa gtcagcaggg atattgatga
     4381 tttggttgca tcgggattgg tcatcaagct tgaaaacggc aactacgcct acggcatcaa
     4441 aaccctacaa atcgcagagc ggttcagaaa acagcaagag cggctgaatg cgcgcttgca
     4501 agaattggaa aaccgaattt actaaatgcg acgacgtcgt cgcatttgag gagcaaaaga
     4561 aatggcaaca gaaattttag gacatacggt cggcgtaacg gcaaacgaat tggctatcca
     4621 cagtatggag gttatggaca agttttcagg cggcgaggcc tacaacgaga cggtatggat
     4681 tgagcgcgga cgatttgcgg acgccaaacg atggaaggga tgtttgagcc gggacgcgcg
     4741 ctgatcatca tcaaagagca tacgccgcat gggcggtttg ccgaaatcgc tgaaaaagag
     4801 ttggcctcgg acggcgggaa tcccaaagac tgatgaatgc caccctccgt tttatcgacc
     4861 cgaaaatgaa acaagcgcag cctaagctga tgacgttggg caaatccaaa ctgctcgagc
     4921 tgctggtcga agacgacgac actttgttgg agcttgccga aggcggtgag gtcaacggca
     4981 acacttttga cgatgtcgac cgtatgacta ttaaggagct gcgcgtcgcc ctgcgcgaaa
     5041 gccgtgaaac ggcggaagcg aaagataagg tgattgccga taaaaataaa aaggtcgatg
     5101 agctggcgga aaagctgtcg aaaaagcaga cgggtgtcaa agagcctaaa cctgcggatg
     5161 tgggcatcga gctgacgatg cagcttggca gcttgacagc ttggaagtcg gtatccgctc
     5221 gcaaatcagc cgattgcgcg atatgttcga gcagatggcg gcgcacggcg aggcgcatgg
     5281 atttgaccac cgcgcgaaga tggtcggcat gctcaatcaa attattttgg actgcgagca
     5341 actgcgcgaa agctatgccc taccgaccga agcaccggca gacaatgtgc cggaatggtt
     5401 gggcggtgaa acgggagaag gcgatgaatc cggcaatgat tgagcgtctt aaagcagtcg
     5461 aaaatcaggc ggaagcaatg gggcgcggcg cacgctctgc atatcttaag cagcaggcgc
     5521 aggaattggg catcagcctt gccacgctat accgcaagct ggaggcggtc agcgtcaagc
     5581 cgacgcgcaa acggcgcagc gatgcgggca agacggagct taaaccggaa gaagccaaat
     5641 tgatttcggc ggttttggcg gaggcgatga ggcgcaacgg caagcggttg atgccggtgc
     5701 ggcaggcggt ggaaatgctg cgcgccaacg ggaaaatcga ggcggcgcgg attgacgggg
     5761 aaaccgggga agtcatcccc ctttctgaaa acaccattac ccgggcttta cgggaataca
     5821 agctgcattc cgaccagctt ttgcagcccg accccgtcag ccgcatgaaa tcggaacacc
     5881 cgaaccattg ttggcaaatc gacccgagtt tgtgcgtttt gtatttcctg ccgcgtcagg
     5941 gcaaggatac ggggctgcgg gtgatgaagg aagaggagtt ttataaaaac aagccgaaaa
     6001 acgtcgtcaa aatcgaaaac gaccgcgttt ggcggtacac ggggacagac catgcctccg
     6061 gcacgatttc ggtgcgttat tacttcggcg gcgaaaccag cgcgaacctc tgtgattttt
     6121 tcatctacat gatgcaggcg aaaaaagaca tcggcaaaga cccgttccgg accgtaccgc
     6181 gcatggtcat gcttgacccg ggcagcgcga atacttcggc ggcgtttaaa aatttgtgca
     6241 agcccttgga tgtgcatgtg caaatcaaca agccgggcaa tccgcgtgcc aaagggcaag
     6301 tggaaaaagc caacgatatt gtggaaacgg catttgagag cgggttgcgc tttaccgagg
     6361 tacacgacat cgaccagctc aatgctttat cggaacgctg gatgcgttac tacaacggta
     6421 cgcaaaaaca cagccgccac ggcatgaccc gctatcaggc gtggaacaaa atcaaacccg
     6481 agcagctcat cctgccgccg cctgccgaat attgccgaga gcttgccgtc agcgcgccga
     6541 aagaggcgaa agtctcggcg gatttggaaa tccgctttgg cggacgggta tatagcgtaa
     6601 aaggcatcaa ggggattttg gtcggtcaga aagttttggt cggtaagaat ccttgggagg
     6661 caaacggggc gcgggtcgcc acttatgacg cggagggtaa cgaggtttgg gtatccgtac
     6721 ccgaagtagt ttttgacgag atgggcttca aggctgatgc cgcggtcatc ggggcggaat
     6781 acaaagcccc ggccgataca gacgcgcaac ggcatcgcaa agagctggac aagctggcga
     6841 tgggtgcgga aacgctggag ccggcagccg ccaaacgcaa aggcaaggca gtcccgttcg
     6901 gcggcaaaat cgacccgtac aaacatcaag aagatacgct tgccgcaagc aatacgctct
     6961 ttatgcccaa acaggggcaa cagatggatt acaacaagat ggaggtcgcc gagcaggtat
     7021 tgagcaaggt cgaaatcgcc aaacgcttaa aaccccgcgt cgaggcagac ggcggcgact
     7081 ggaaacaggc agtgtcggtc atcctcaaac actacccgga aggtgtgacc gagggcaggc
     7141 tggaagaggc gtttgaacgc acccggacaa gatgccgtct gaaacttttg aaaaccggtt
     7201 aggtttcaac cgaaaacagc ttttatagtg gattaacaaa aatcaggaca aggcggcgaa
     7261 gccgcagaca gtacaaatag tacggcaagg cgaggcaacg ccgtaccggt ttaaatttaa
     7321 tccactataa aaaccaccct gcttgtccga tgcctcggga cggacgggca aaccgacacg
     7381 gcacgcaaac cgcgtcggca aaaatgccgt ctgaaaaaat tcagacggca tcttcagaca
     7441 cattacctgc aaacggcaac acattccaat ccaaaccgat caggcaatca atacgaacgg
     7501 ctgtttacat acttaccagc tttcaccaac cggtatcgat ttaaccgatt tccttaatat
     7561 ttttcctgtc cgttttaaac ttcgccttaa acacatccgg taaatcttta tcgaaatacc
     7621 aaagcccgtc atccatttcc aatgcgccgc ccattccatg cagaacgact tttcccccgt
     7681 taaaggatcg gtttcggtaa tttccacctc atgcattttt ccccaatcca aaacaggcaa
     7741 cttgtgtgca aacgccaaaa cttgttcgtc agaacggccg cacgccttat cgcatcggcc
     7801 tgaaacatat acgggacaag gctcatcctc tgcataaccg tccggaagga taccggctga
     7861 ggcaggacac aatccgtatg tttccgccca cgacgacaaa gcccgtctcg ccgccttttt
     7921 attggcaaat aatccggtag gcggattatc cgtcacaccg tttttcaaag ccgctgtttt
     7981 cgcattcaac atgccgtctg aacctttttc aaacctgacg gtcgtaaatg ttttaagcag
     8041 atttttggca gatacataac aacccgaatg ataacgtccg accaattccg ctttaatctt
     8101 atatgcatgc aggctgccca atgcggaaaa aaaaaaacgg acttcctccg tattgcacca
     8161 atcaaacggg ggcttttccg gaatccaaca aagccgcaac ctcgccatat gcccgttcaa
     8221 acgtaccgat ataatttact tttcccccgc cgtcgaaaca ggcaagcaca cctgtaccgt
     8281 cgggcaaacc gtacagccgt tccctcaacc gttcgggaag cgcggcagga aaaagtttcg
     8341 gattcgtcaa acggaaacac tgcctgctcc actcctcaag cccgtgtgcc gacaggctgt
     8401 attccaaata atcacacaac gccgatacat ccgccatcgc acgatgcctg tcttccacaa
     8461 caatccccaa cctttcgatg ataccgtcca ggctgtgctt gtaaaactgc ggatacagcc
     8521 gacgcgaaag ctgcacactg cacaaagcag gcgatgaaaa tccgataccc gcacgatgaa
     8581 actcatgctt taaaaacgta tagtcgaaac ggctgttgtg cgccaccagc acgcacccct
     8641 tcaataccga aaacaacccg ccggcaattt cagcaaacac cggcgcgtcg gcaaccatgc
     8701 cgtctgaaat ccccgtcagt tccgccacaa acttcggaat cggtttttga ggattgacca
     8761 gccattcata cctctccgcc cttccctgcc caaacttgac caaagccact tcggttaccc
     8821 tgtcttcata cagattgccg cccgtcgatt ccaaatcaac cacggcaaca ggcattccaa
     8881 accgtaaaaa cgccttttcc agcaagggcc agcgggaaac aacaatcatt ttattctctt
     8941 taaattcaaa caacaaaccg atattttaca cttttaaggc atttcatcca acaaaataat
     9001 tgacagaatc cgatgattac cataaaattc aaaaatttat tgcagcgcac ccgtagctca
     9061 gttggataga gtatctggct acgaaccaga gggtcgggcg ttcgaatcgc tccgggtgcg
     9121 ccagtaagaa aatacaatac gcgcccatcg tctagcggtt aggacatcgc cctttcacgg
     9181 cggtaaccgg ggttcgattc cccgtgggcg tgccagattc caaatccccg aaataatccc
     9241 tcggggattt ttattgcctc ggcaattcgt taccatatct ttacctaccc acttcatcag
     9301 aatctcagac gtaatcgaat catattcaaa cttttgccat gcaaaccgat atcccgtaac
     9361 cggatgcggt gtccgttcaa tatagtggat taaatttaaa tcaggacaat gcgacgaagc
     9421 cccagacagt acaaatagta cggcaaggcg aggcaacgcc gtaccggttt aaatttaatc
     9481 cactatattt tgtccgattg gtacagatat aacagcatat tccaaagctc cttctgcttt
     9541 tctgtttacc actgcaatat ttagagtata ataccaaatt tgagtaatgg ttctaaaaca
     9601 attaaaacca tttttcatga gcctgactga ttcgtatatt cggagaaact gatgcagaat
     9661 atttttgacc ctttgattat tcgtggaaaa tcccttattc ccatcgtgca aggcggtatg
     9721 ggggtcggtg tttccgcatc gggtttatcc agcgcggtgg cgcgtgaaaa cggcatcgga
     9781 acgattgcca gtgtagattt gcgccacctt cacgaagacc tgctcgccga atcccaaatc
     9841 aatccgagtg aagagaaata tacgtctttg aactgtaccg cattagacag ggaaatccaa
     9901 aaagccaaaa gtgcttcaga gggaaaagga ctgattgcgg tcaacgtgat gaaggcggtc
     9961 aaagaccacg ccgcgtatgt ccgccaggct tgcgaatcag gggcggatgc ggtcgtgatg
    10021 ggtgccggcc tgcctttaga cctgccggaa atgaccgagg gctatcataa ggatgtcgcg
    10081 ctgctgccga ttctgtccga atcgcgcggt attaatatcg tcttgaaacg ttggatgaaa
    10141 aaaggcatat tgcccgatgc gattgtagtc gaacatcctg cccatgcggc cggacatttg
    10201 ggtgcatcaa ccgttgaagg cgtaaacgat gccaaattcg acttcaaacg cgtgattgag
    10261 gaaacgtttg aagtgtttaa aaatttgggg ctggagggag aaaaaatccc gcttattctt
    10321 gcgggaggca tggcaaattt tgaaaaagtc aaaaccgccc taaagaactg gggagcctcc
    10381 gccgttcaaa tcggtacggc ttttgccgtt accgaagaag gagatgcaca cctcaacttt
    10441 aaaaaaacgc tcgccagtgc ggaaactgaa aaagtagtcg aatttatgtc tgttgccggt
    10501 ttgccggcgc gcggtatccg caccaaattc ctagacagct atatcaggcg cgaaggcaaa
    10561 cttcaggcaa acgccaaagc cgacccgcgc cgctgtaccc aaggtttaaa ctgcctgacc
    10621 agctgcggtc tgcgcgacgg gctttccaaa gcagggcaat tctgtattga tatccagctt
    10681 gctgccgcat tccgtggaga agttgataag gggttgtttt tcaggggaaa aaaccagctt
    10741 cccttcggta atgccatccg caccgtccgg gaaacgatac aatatctgct gacggggagc
    10801 gaacctgttg caacgctcgg acgctgacat caggtaggat ttgatttgca aacaaaatgc
    10861 cgtccgaagg gctttcagac ggcgtttttc aggttgtgtt ccggaacagt gtcgaaaaaa
    10921 cggagagaaa taaaaacgtt tttatatgaa caaaatgcct tccgcattat gtcggacata
    10981 caacacaaat gccgtctgaa gcctttcaga cggcattttt caggctgcct ttcggaatga
    11041 tgttaaaaaa taaacgggat gagatacatt tattttcgtc cgacaaatca gaccatcacg
    11101 ccgaataatc aaacaatgcc tgcccgacat tgcatataac aaaccaatgc aatgaaaaca
    11161 cggctttttt atttgcttcc tgcattattg aaaagtttgt ccatcggggt caaatcgacc
    11221 gcattgccct ggctggtaat ccatttgttc tcgacgcgcc acacgcctgc cgcgtcctcc
    11281 acgcgcacat accagtggtt ggccggcgga agggttttga acaccgcctc atattccgcc
    11341 ctgccgttct gcgcgctgcc gacgggcttg agggcgacgg tttgatcgtc cgccttgcgg
    11401 gtcgggtgca tcagcagcag gttcaaaggc tgtttgccgt caaactcgcc gccgacaaac
    11461 acttttgccg cattcatatc gggagaaatg aggacctgca ccccgatatg ccgtctgacg
    11521 gcttcttcat cccgatgaag ctggatgtcg atatgcttgc catccttata ataatcgtcc
    11581 gtaaccaaat ccgtcgcgtg ctgctgcgcg acaaaaaaca tagcgacgct ggcgatgacg
    11641 acaaaaatcg gccccgccat caagacccac ggccagacgt gtttgtacca aggcttgatt
    11701 ggattgtttt gagacacggt tattctccga taaaggttgc gtcttcttcc aaaacaaccg
    11761 gcttgccgtc tgatgcaccg ctttcccggt attggaagat aaactcgata ggatgactgc
    11821 ctttgtccgc gtattccgga atggtggaca cttggacggg aagggttatt gtttcgcgcg
    11881 gagccacttt tataccgcct tcaggcagcc cggtcagggc gatttcgtca aatcctttga
    11941 cacttgcggt aatcagctgt tctttttcgc tgttgttgat gatacgcagg ctatatgcgt
    12001 tttccagcca acctttggcg ttttcgcgca ccattacgcc acggtctttc agaatatcga
    12061 cttcgaccat tttgcgcgtg gacaaaccga ccaggaaggc ggcgacaacc actgccaaca
    12121 ccgcgccgta acctgccacg cgcggtctga gcagccgttt tttaatgtct ttttcggcat
    12181 attcgtgttc cagcgcgctt tcggtcgtat agcgtatcaa accgctcgga taacccattt
    12241 tgtccataat ctcatcgcac gcgtcgatac aggcggcgca gccgatacat tggtattgca
    12301 ggccgttgcg gatgtcgatg ccgacggggc agacttggac gcacatcgca cagttgatgc
    12361 agtcgcccaa acccgcctct tccttgttga ccgttttctt gcgggcgccg cgcggttcgc
    12421 cgcgctccgc gtcataagaa acaatcagcg tgtccttatc gaacatcgcg ctttggaaac
    12481 gtgcgtacgg acacatatgc aggcacactt tttcgcgcat aatatgggcg aagaagaagg
    12541 tcataaagcc gtaaaacgct gcggcaaaca tcgcgccgcc gcctgctgct ccggtgaata
    12601 aatcgggaac aaactggcgg atggggacaa accagccggc aaacgtgatg cccgtccacg
    12661 cgcagacaag gaaaatcaac aagtatttgg tggctttgat gcggattttg gtgaaattcc
    12721 acggcgattt ttccagcttc aggcgtttgt ttctatcgcc ttcgaccagg ttgtcgatcc
    12781 acagcataat ttcggtgtaa accgtttgcg ggcaggaata gccgcaccac aaacggccgg
    12841 caatcgtcgt ccaccaaaac agcccgaagg cgcaaatcat cagcagcagg gcaaggtaaa
    12901 tcaaatcgcc cacccccaac gacaatccga aaatgaagaa atgccgttcg gggatattga
    12961 aaacgacggc ctgccttccg ctccaattga accacggaat gacgtaaaac acaaactggg
    13021 tcgccaatac ggcggcgata cgcagtttgg cgaaccgtcc ttccgccttt ttgggatgga
    13081 tgcgttcgcc ttcgggatgg atttgaatca cgctggcacg cggatcgaac gtttttttca
    13141 ctttcggcgc ggcttttgtt tgttcggacg tgccgattcc ggatgccgga ctgccggctt
    13201 ggttttccgt ggtcattctg cattccttag atttttgatt gatggtttgc ccgttaccgc
    13261 cgccgttttg cttttcagac gtcatttttc ttgttttttt aaggcattgt gtttcaagtt
    13321 ttgagaaaat ccgcttttcc caaaatatat tcccgctatt gtacaacttt atgcgccgtc
    13381 cggatgtatt gggcgaatac atttcccatc cgcatcaaaa cgccctgatt ttaccgcacc
    13441 gcccgaacaa aattaaaata ctcttaaaaa acaaagacta aaaaaaacag acaccccctt
    13501 atcggcagaa ccgccggcgc aagctcataa acaaacgcta tcaacaatcc ggcacacaat
    13561 ctataacgtt ttatttcaaa aggaataatg gcaggcttcg cccgc
//
LOCUS       DAXGCP010000063        13495 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.063, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000063 DAXGCP010000000
VERSION     DAXGCP010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13495
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.063"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..359)
                     /locus_tag="ACFJCW_001538"
     CDS             complement(<1..359)
                     /locus_tag="ACFJCW_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4151644.1"
                     /translation="MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFY
                     RKIRTVTNHRLALAADEVFEGPAGPGASCFGGRRKGRRGRGAAGKAVVFGIPKRNGRA
                     YTVAADDAEPETLPPAV"
     gene            597..1940
                     /locus_tag="ACFJCW_001539"
     CDS             597..1940
                     /locus_tag="ACFJCW_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HFC4151645.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPAITEVALLGEEYVGMRPSMK
                     IKEGEAVKKGQVLFEDKKNPGVVFTAPASGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYVPEALAKLSSEKVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPTVIIKEAAEDFKRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFVTGRLNTERVVALGGLQVNKPRLL
                     RTVLGAKVSQLTAGELVDADNRVISGSVLNGAIAQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            1943..3175
                     /locus_tag="ACFJCW_001540"
     CDS             1943..3175
                     /locus_tag="ACFJCW_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HFC4151646.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSPEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFASVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVANPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            3168..3944
                     /locus_tag="ACFJCW_001541"
     CDS             3168..3944
                     /locus_tag="ACFJCW_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HFC4151647.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKDTDIGKTFAERIEQRVVDLATGEYVKDAPKDFSARIAGKDPA
                     QSIRIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIRPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGVQ"
     gene            3944..4570
                     /locus_tag="ACFJCW_001542"
     CDS             3944..4570
                     /locus_tag="ACFJCW_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HFC4151648.1"
                     /translation="MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            4574..5167
                     /gene="nqrE"
                     /locus_tag="ACFJCW_001543"
     CDS             4574..5167
                     /gene="nqrE"
                     /locus_tag="ACFJCW_001543"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HFC4151649.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPANQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYDFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            5181..6398
                     /gene="nqrF"
                     /locus_tag="ACFJCW_001544"
     CDS             5181..6398
                     /gene="nqrF"
                     /locus_tag="ACFJCW_001544"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HFC4151650.1"
                     /translation="MEIILGIVMFTVIVLALALMILFAKSKLVSEGDITIKVNDEKEL
                     TMPAGGKLLGALASQGIFVPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPPHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLHSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            6915..7970
                     /locus_tag="ACFJCW_001545"
     CDS             6915..7970
                     /locus_tag="ACFJCW_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HFC4151651.1"
                     /translation="MPSETRLPNLIRALIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRDKLPSPAKIQKRIDDALKEVNRQMSTYQTDSEISRFNQHTAGKPLRIS
                     SDFAHVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILQQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNAHGEPWRIGIEQPNIIQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVSDSAMTADGLSTGLFVLGETEALRLAEQEKLAVFLIVRD
                     KDGYRTAMSSEFAKLLR"
     gene            7996..8211
                     /gene="nqrM"
                     /locus_tag="ACFJCW_001546"
     CDS             7996..8211
                     /gene="nqrM"
                     /locus_tag="ACFJCW_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HFC4151652.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRTIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(8335..8913)
                     /gene="grpE"
                     /locus_tag="ACFJCW_001547"
     CDS             complement(8335..8913)
                     /gene="grpE"
                     /locus_tag="ACFJCW_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HFC4151653.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVARKEA"
     gene            9096..9914
                     /gene="cysE"
                     /locus_tag="ACFJCW_001548"
     CDS             9096..9914
                     /gene="cysE"
                     /locus_tag="ACFJCW_001548"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HFC4151654.1"
                     /translation="MKKNHLNTTGFDLWHTIREETAAAAAAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQISKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARLGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFAEIDFMI"
     gene            complement(10118..11629)
                     /gene="ubiB"
                     /locus_tag="ACFJCW_001549"
     CDS             complement(10118..11629)
                     /gene="ubiB"
                     /locus_tag="ACFJCW_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HFC4151655.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCVSLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQPIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAAWVERLFSDGKRLKPREVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVSDIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HVESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKINALVDEARRQEMRDAYIHLVKVQQRQSLWLAAIAVVLLLILLLK"
     gene            complement(11664..12124)
                     /locus_tag="ACFJCW_001550"
                     /pseudo
     CDS             complement(11664..12124)
                     /locus_tag="ACFJCW_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
     gene            complement(12121..12267)
                     /locus_tag="ACFJCW_001551"
     CDS             complement(12121..12267)
                     /locus_tag="ACFJCW_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151656.1"
                     /translation="MPSERSDGIFTFGKYIIGMNLHIIRLLEDESGFPKGTGGTVSGV
                     FVPL"
     gene            complement(12284..12622)
                     /gene="erpA"
                     /locus_tag="ACFJCW_001552"
     CDS             complement(12284..12622)
                     /gene="erpA"
                     /locus_tag="ACFJCW_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HFC4151657.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            complement(12755..13441)
                     /locus_tag="ACFJCW_001553"
     CDS             complement(12755..13441)
                     /locus_tag="ACFJCW_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4151658.1"
                     /translation="METFKDRLVFLWKSEARQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVGHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTV"
BASE COUNT         3332 a         3782 c         3239 g         3142 t
ORIGIN      
        1 ttgacggcag ggggcaacgt ttcaggctcg gcatcgtccg cggcaacggt ataggcccgc
       61 ccgttgcgtt tcggaatgcc gaagacaacc gcttttcctg ccgcgccgcg accgcgtctg
      121 cctttacgcc gtccgccgaa acagcttgcg cccggcccgg cggggccctc gaaaacctca
      181 tcggcagcca aggccaaacg atggttggta accgtgcgga ttttacggta aaacagtgcc
      241 gccgaatcgg gatggatacc caaaatatcg gcggcagaac gggcggtaac ttccggtaca
      301 aaagaacgga gcggttcttt ctgtacttct ttctttaatt tgcagtgtgt tatcttcata
      361 tttcgagggt aacatatctg ctaatctagt acagaccctt atcaaatcaa tatccccctt
      421 ccgacaatta aaaacggctt ccgcaaggaa aaaagcggca aatctgacaa acaggtacaa
      481 ttcctgataa aatctaacac tttgctacat taatttattc aatgcttttg atgccacgcg
      541 acacggtatc aaaaacacgc cgtttttacc ttaaccatca caagtaatgc aaatctatga
      601 ttaaaatcaa aaaaggtcta aatctgccca tcgcgggcag accggagcaa gtcatttatg
      661 acggcccggc cattaccgaa gtcgcgttgc ttggcgaaga atatgtcggc atgcgcccct
      721 cgatgaaaat caaggaaggt gaagccgtca aaaaaggcca agtgctgttt gaagacaaaa
      781 agaatccggg cgtagtattt actgcgccgg cttcaggcaa aatcgccgct attcaccgtg
      841 gcgaaaagcg cgtacttcag tcagtcgtga ttgccgttga aggcaacgac gaaatcgagt
      901 tcgaacgcta cgtacctgaa gcgctggcaa aattgagcag cgaaaaagtg cgccgcaacc
      961 tgattcaatc aggcttatgg actgcgcttc gcacccgtcc gttcagcaaa atccctgccg
     1021 tagatgccga gccgttcgcc atcttcgtca atgcgatgga caccaatccg ctggctgccg
     1081 accctacggt catcatcaaa gaagccgccg aagacttcaa acgcggcctg ttggtattga
     1141 gccgcctgac cgaacgtaaa atccatgtgt gtaaagcagc aggcgcagac gtgccgtctg
     1201 aaaatgctgc caatatcgaa acacatgaat ttggcggccc gcatcctgcc ggcttgagtg
     1261 gcacgcacat tcatttcatc gagccagtcg gcgcgaataa aaccgtgtgg accatcaatt
     1321 atcaagacgt gattgccatc ggacgtttgt tcgtaacagg ccgtctgaat accgagcgcg
     1381 tggttgcctt gggcggcctg caagtcaaca aaccgcgcct cttgcgtacc gttttgggtg
     1441 cgaaggtgtc tcaacttacc gccggcgaat tggttgacgc ggacaaccgc gtgatttccg
     1501 gttcggtatt gaacggtgcg attgcacaag gcgcgcatga ttatttggga cgctaccaca
     1561 atcagatttc cgttatcgaa gaaggccgca gcaaagagct gttcggctgg gttgcgccgc
     1621 agccggacaa atactccatc acgcgcacca ctctcggcca tttcctaaaa aacaaactct
     1681 tcaagttcac gacagccgtc aacggcggcg accgcgccat ggtaccgatc ggcacttatg
     1741 agcgcgtaat gccgttggac atcctgccta ccttgctttt gcgcgattta atcgtcggcg
     1801 ataccgacag cgcgcaggct ttgggttgct tggaattgga cgaagaagac ctcgctttgt
     1861 gcagcttcgt ctgcccgggc aaatacgaat acggcccgct gttgcgcaaa gtgctggaaa
     1921 ccattgagaa ggaaggctga ttatgggctt aaaacatttt ctggaaaaaa tcgaaccgca
     1981 cttcctgccg ggcggcaaac atgaaaaatg gtatgccctc tatgaagctg cggcgacgat
     2041 tttctataca tccggcgcgg taacgcgcaa agcggcgcac gtccgcgacg cgctcgactc
     2101 caaacgcatg atgattttgg tgtggctggc tttgttcccc gccatgtttt acggcatgta
     2161 caacgtcggc gcacaggcat tcggtgcctt aacgcccgat ttgctgcaac aaagcatcgc
     2221 caacgactgg cattacgccc ttgccaacgc tttgggcatc aatatgtcgc ctgaagcggg
     2281 cgtgttgggc aaaatgctgt tcggcgcgat ttacttcctg ccgatttacg cgaccgtatt
     2341 tattgtgggc ggcttctggg aagtcttgtt cgcatccgta cgcaaacacg aaatcaacga
     2401 aggtttcttc gttacttcga ttctgtttgc cttaatcgtt ccgcccacgc tgccgctgtg
     2461 gcaggcggct ttgggtattt ctttcggcgt tgtggttgcg aaagaagtat tcggcggtac
     2521 aggtaaaaac ttcatgaacc ctgcgctggc aggccgcgcc ttcctgttct tcgcctaccc
     2581 cgccaacttg agcggcgatg cggtttggac ggcggttgac ggctattccg gcgcaaccgc
     2641 gctggcgcaa tgggcggcac acggtgcaga cggcctgaaa aacgccgtaa ccggtcaaac
     2701 catcacttgg atggacgcgt ttatcggcaa actgcccggc tccatcggcg aagtctccac
     2761 tttggcactc ttaatcggcg gcgcgtttat cgtgtttgcc cgcatcgctt cttggcgcat
     2821 tattgccggc gtgatgatcg gtatgattgc gatgtcttcg ctgtttaact tcatcggttc
     2881 tgacaccaac gctatgtttg ctatgccttg gtactggcac ttggtggtcg gcggcttcgc
     2941 catcggtatg ctgtttatgg cgaccgaccc cgtttccgct tcctttacca atgtcggcaa
     3001 atggtggtac ggcgcgctta tcggcgtaat gtgcgtgtta atccgcgtgg ccaatccggc
     3061 ttaccccgaa ggcatgatgt tggcgattct gtttgccaac ctgtttgccc cgattttcga
     3121 ctatttcgtc gcacaagcga acatcaaacg cagaaaggcg cgcagcaatg gctaagaaat
     3181 tcgataaaga cagcttcagc ggcacgctga ttgtcgtgtt ggcggtcagc ctgatttgct
     3241 cggtcatcgt tgccggtgcg gtcgtcggct tgaaacccat ccaagaaaaa caaaaactcc
     3301 aagacaaaca aggctatatt ttgagcgtgg ccggtttgat ggataaggac accgacatcg
     3361 gtaaaacctt tgccgagcgt atcgagcaac gcgtggtcga tttggcgacc ggcgaatatg
     3421 tgaaagacgc gccgaaagac ttcagcgcgc gcatcgcagg caaagacccc gcgcaaagca
     3481 tccgcatcaa acctgaagac gatttggcag gcatcaaaag ccgcgccaaa tacaccgagg
     3541 tttatttggt aaaaggcgaa gacggcaaaa tcgggcaaat catcctgccg atgcacggca
     3601 acggtttgtg gtcggtgatg tacggcttcg tcgccatccg acccgacggc aacaccatca
     3661 acggcattac ctactacgaa caaggcgaaa ccccgggctt gggcggcgaa atcggcaatc
     3721 ctttgtggca gcaaaaattc gtcggcaaaa aattgtttga cggacaaggc aaactcgccc
     3781 tgcacgtggg caaaggcgcg ggttcggaca aagaacacgg cgtagacgcc ctctccggcg
     3841 cgtcgctgac ttccaaaggc gtgcaaggtt cgttcgccta ctggttcggc gaaaacggct
     3901 atatccccta cctgaacaaa ttgaaatcag caggagtgca ataatggctg atatgaaacg
     3961 cttgaaacat ttgatgttct caccctttat cgacaacaac ccgattgcct tgcaggtttt
     4021 gggtatttgt tcggctttgg cggttaccac caaacttcag acggccatcg taatgggtat
     4081 ttccgtagct ttggtaaccg gtttttccag cttcttcatt tcgctggtgc gcaactacat
     4141 ccccaacagc atccgcatca tcgtgcaaat ggcgattatc gcgtcgctgg ttacgctggt
     4201 cgaccaactg cttcaggcat ttgcctacga attgtccaag cagctttccg tattcgtcgg
     4261 cctgattatt accaactgta tagtgatggg ccgtgccgaa gcatttgcga tgaaagagcc
     4321 gccgctggaa agcctgatcg acggcatcgg caacggtgcg ggctacggga tgatgctgct
     4381 tgtcgtcgcc accgtccgcg aactgatcgg ctcaggcaaa cttttaggtt ataccgtctt
     4441 tcaaaccgta caggacggcg gctggtatca gaccaacggc ctcttcctac tcgcccccag
     4501 cgcgttcttc atcatcggct ttttgatttg gggactgcgt acttggaaac ccgaacaggc
     4561 ggaggaataa gctatggaac actatttgag cctcttcatc aaatccgtct tcattgaaaa
     4621 tatggcgcta tccttctttt tgggtatgtg tacgtttttg gcggtatcca aaaaagtatc
     4681 caccgcattc ggtttgggtg tggcggtaat tttcgtactc gggctgtccg tccccgccaa
     4741 ccaattggtt tactcgctgc tcaaagacgg cgcgattgtc gaaggcgtgg atttgacctt
     4801 tttgaaattc atcaccttta tcggcgtgat tgccgctttg gtgcagattt tggaaatgtt
     4861 cttggacaaa ttcgtccccg ccctctataa cgcgctgggc atctacctgc ctctgattac
     4921 cgtaaactgc gcgattttcg gcgccgtatc gtttatggcg caacgcgaat acgacttcgg
     4981 cgagtccgtc gtgtacggct tcggcgcggg tttgggctgg atgttggcga ttgtcgcttt
     5041 ggcgggcatt accgaaaaaa tgaaatattc ggacgctccc aaaggcctca aaggcttggg
     5101 cattaccttt atcgccgccg gcctgatggc aatggcgttt atgtcgttct ccggcatcca
     5161 gttataagaa agggaccggt atggagatta ttttaggtat cgtgatgttt accgtcatcg
     5221 tcttagcttt ggcactgatg attctgtttg ccaaatccaa gttggtcagc gaaggcgaca
     5281 tcaccatcaa agtcaatgat gaaaaagaac tgactatgcc cgccggcggc aaactcttgg
     5341 gcgcgcttgc cagccaaggc atctttgtcc cctccgcctg cggtggcggc ggttcgtgcg
     5401 gacaatgccg cgttgtcgtg aaaagcggcg gcggcgacat tctgccgacc gagctgtccc
     5461 acatcagcaa acgcgaagca cgcgaaggct gccgtttgtc ctgccaagtc aatgtcaaaa
     5521 ccgacatgga catcgaagta cccgaagaag tgttcggcgt gaaaaaatgg gaatgcaccg
     5581 tcatttccaa cgacaacaaa gcaacgttca ttaaagaact caagcttgcc attcccgaag
     5641 gcgaagaagt tcctttccgc gccggcggct acattcaaat cgaagccccg ccgcacaccg
     5701 ttgcctacaa agacttcgac attcccaagg aatatcacga agactgggac aaatacaatc
     5761 tgtggcaata cgtttccaaa gtggacgagc cgattttgcg cgcctactct atggcttcgt
     5821 atcctgaaga aaaaggcatc attatgctga acgtgcgtat cgccacgcct cccccgcgcg
     5881 tacccgatgc gcctccggga caaatgtcgt cctacatctg gtcgctcaaa cccggcgaca
     5941 aagttacgat ttccggcccg ttcggcgaat ttttcgccaa agacaccgat gccgaaatgg
     6001 tatttatcgg cggcggtgcg ggtatggccc cgatgcgttc ccacattttc gaccagttga
     6061 aacgtttgca ctccaaacgc aaaatcacct tctggtacgg cgcacgctcc aaacgcgaaa
     6121 tgttctatgt cgaagacttc gaccaactcg cggcagaatt cccgaacttc acttggcacg
     6181 tcgccctgtc cgacccattg cctgaagaca actgggacgg ctacacgggc ttcatccaca
     6241 acgtggttta cgaaaaccac ctgaaaaacc acgaagcacc ggaagactgc gaattttata
     6301 tgtgcggccc gccgattatg aaccagtccg tcatcaaaat gctcaaagac ttgggcgtgg
     6361 aagacgaaaa catcctcttg gacgatttcg gcggttaaat attcggcttc aaacacaaaa
     6421 ggaagaaacc ccggtttctt ccttttttat ccgatgccgt ccgaacaccc ttcagacggc
     6481 atccgcccat acccgtatca atatcgtttt tttaccctgc ggcggatgtg cggctaaata
     6541 ttttgacgaa aaaacaaaga agtatacttc tttttagtta tggttgattc cataactaaa
     6601 aaagtatcga tcaacccatt ttacgaggta cggataatgt ctgacagctt tgaaaacagc
     6661 cccgaatacg atgattggat tgaatcgggc ggtcgtgatg aagattacga atactactac
     6721 aacaaatggc aacgcaggac gcgctgacca ttaaaccctg acaaaccggt ttgtaaaaca
     6781 ccggtttgtt ttttattacc gccacccaaa cgacgggcga tgccgcccga acgcccttca
     6841 aacggcatcg gcatagaaac ataccggccg ttttgcgata taattcaagc catttgccaa
     6901 aactgtcaaa cactatgccg tctgaaacac gcctgccgaa ccttatccgc gccttgatat
     6961 ttgccctggg tttcatcttc ctgaacgcct gttcggaaca aaccgcgcaa accgttaccc
     7021 tgcaaggcga aacgatgggt acgacctata ccgtcaaata cctttcaaat aatcgggaca
     7081 aactcccctc ccctgccaaa atacaaaagc gcattgatga tgcgcttaaa gaagtcaacc
     7141 ggcagatgtc cacctaccag accgattccg aaatcagccg gttcaaccaa cacacagccg
     7201 gcaagcccct ccgcatttca agcgatttcg cacacgttac cgccgaagcc gtccgcctga
     7261 accgcctgac tcacggcgcg ctggacgtaa ccgtcggccc tttggtcaac ctttgggggt
     7321 tcggccccga caaatccgtt acccgggaac cgtcgccgga acaaatcaaa caggcggcat
     7381 cttatacggg catagacaaa atcattttgc aacaaggcaa agattacgct tccttgagca
     7441 aaacccaccc caaagcctat ttggatttat cttcgattgc caaaggcttc ggcgttgata
     7501 aagttgcggg cgaactggaa aaatacggca ttcaaaatta tctggtcgaa atcggcggcg
     7561 agttgcacgg caaaggcaaa aatgcgcacg gcgaaccgtg gcgcatcggt atagagcaac
     7621 ccaatatcat ccaaggcggc aatacgcaga ttatcgtccc gctgaacaac cgttcgcttg
     7681 ccacttccgg cgattaccgt attttccacg tcgataaaaa cggcaaacgc ctctcccaca
     7741 tcatcaatcc caacaacaaa cgacccatca gccacaacct cgcctccatc agcgtggtct
     7801 cagacagtgc aatgacggcg gacggtttat ccacaggatt atttgtttta ggcgaaaccg
     7861 aagccttaag gctggcagaa caagaaaaac tcgctgtttt cctaattgtc cgggataagg
     7921 acggctaccg caccgccatg tcttccgaat ttgccaagct gctccgctaa acatacaaac
     7981 cgattaggaa acaccatgaa aaccctgctc ctcaccttcg gcatcttcct gaccgtcatc
     8041 atcggtatgg cggtcggcta tattttctcc aaacgcacca tcaaaggcag ttgcggcggc
     8101 attaccgctt taggtatgaa aaaaatgtgc gactgcgaca caccttgcga caccctgcaa
     8161 aaaaagctgg atgaagaaaa acaggcaggc ggcatacggg ttgaccgtta acgccgaaac
     8221 aaaatgccgc ctgaagcccg gccggcgggt tcagacggca ttgccgcttt acttcgatcg
     8281 gtttatacgc aagacacgct tcaggaaata aatcagatta ttccccagac gccttcaggc
     8341 ttccttccgt gccaccgtaa ccatagccgg gcgcaacaca cggtcggaca gggtataacc
     8401 cttcttcatc acaccaacca cggtattggg ttcctgctca ctggccaccg cctgcatcgc
     8461 ctgatggata ttcggatcga gcttatcgcc cgctttagga ttgatttcct tgatttgcgt
     8521 ggcatcaaac gccttctgca actcattcaa agtcatctgc acacccattt tcagcgcatc
     8581 gaaattaccg ctctgatcca aaagcgccat ttccagataa tccttgaccg gcaacatttc
     8641 cacggcaaac ttctgtccgg cgaacttgtg cgtatcggca atttcctgct ggtggcggcg
     8701 gcgcaggttt tgctcgtttg ccaaagcgcg cagttgttcg tctttcaact gcgcttccaa
     8761 ctcggcaatc cgcgcctgca aatcctcata agccggctcg gcggcagcct gttcctgtac
     8821 accgtccgca tttcctactg tctcgacggt ttccaccgcc tccacatttt caaccgcttc
     8881 ttcactgttt tgctgctgtg tctgttcgct catatcgtat ccctcaaaac aaattggaaa
     8941 tcaaaatccg gttattaccc gagcaagata aggacatttt caagaaactt caagcaaagg
     9001 caggaaattc cacatccgcc gccgaatacc ctaccgcaaa aaccatataa acggtaagat
     9061 accgccgacc ttatgctttt cagacggcat ccattatgaa aaaaaaccat ttgaacacaa
     9121 ccggtttcga cctctggcac accatccgcg aagaaaccgc ggccgctgcc gccgccgaac
     9181 cgatgctggc aagttttttg caccaaaccg tgttgcgcca cgagtccctc ggctccgtcc
     9241 ttgcctacca cctttccagc aaactcggca gcccgattat ggacgtgcgc gcgctgtttg
     9301 aaatttacca gcaggcattg ggcagcgaca cccaaatcag caaatgtgtc gaagcagact
     9361 taaaagccat ctacgaacgc gatcccgcct gcgacgaata ttcgctgccg cttttatatt
     9421 tcaaaggctt ccacgcgatt caggcacacc gcatcaacca ccggctgtat ctcgacggac
     9481 gcaaaacgct ggcgtatttc ctacaaaacc gtatgtccga agtattcggc gtggacatcc
     9541 atcccgccgc ccgtttagga tacgggctga tgctcgacca cgccaccggc tttgttgccg
     9601 gagaaaccgc cgtgttgggc aacaatattt cgattttgca cggcgtaacg ctcggcggtt
     9661 cgggcaaaga aggcggcgac cgccacccca aaatcggcga cggcgtgatg atcggcgcaa
     9721 acgcctcgat attgggcaat atccgcatcg gcagcaatgc caaaatcggc gcgggcagcg
     9781 tcgtggtttc agacgtgccg ccgtccatca cggttgtcgg cgtacccgcc aaacccgtgg
     9841 cgcgatcgct caaaaccccg tcggcggata tggatcaaaa tatccagttt gccgaaatcg
     9901 actttatgat ttgaatatcc gcaccaatgc cgtctgaaac gccaaacggg cttcagacgg
     9961 cattgcccgc ttcaagcctg cgccttaata tgccgccgat gccggcactt atcagtcgga
    10021 caaaatgcct tttattcgat acgcccgatt cccacgcaac cggaaataac cggtttcctt
    10081 gtaaacgggc ggagtcgggc gatgattcgg acaaagccta tttcaaaagc aaaatcagca
    10141 gcaaaacaac cgctatcgct gccagccaca ggctttgccg ctgctgcact ttgaccaaat
    10201 ggatataggc atcgcgcatt tcctgccggc gcgcctcatc gaccaaggca ttgattttgc
    10261 gcggcaggga agggatgatt tgcgcccagt ctggggcttc gtttttgagg ttgcgccaaa
    10321 gggctttggg accgacctgc ccgttcatcc attttaccaa aaacggtttg gcggttttcc
    10381 acaagtccaa atcgggatcg agttggcggc ccaagccttc gatgttgagc agcgtttttt
    10441 gcagcaatac cagctgcggc tggatttcga cattgaagcg gcggctgact tcaaacaggc
    10501 gcatcagtac caagccgaag gaaatctgcg aaatcggttt gttgaacaca ggctcgcaca
    10561 cggcgcgaac cgccgcttcc aactcttccg cacgcgtgtc ggcaggcacc cagcccgatt
    10621 cgacgtgggc ggtggcgaca cgtcggtaat cgcggttgaa aaaggcgagg aaattgatgg
    10681 cgagatagcg tttgtcgtaa tcggtcagcg taccgacgat gccgaaatca agggcgatat
    10741 agcggttgtc ggcggcaacc aaaatattgc cggggtgcat atccgcgtgg aaaaagccgt
    10801 cgcggaaaac ttgcgtgaaa aagatttcca cgccgtaatc ggcaagtttg tgcaaatcga
    10861 tgccgtctgc tttgagtttg gcgatgtcgg aaaccggcgt gccgtccatc cattcaatcg
    10921 tcagcacgtc gcttgtgcag tagtcgtaaa acaccttggg cacaatcagc atattgctgt
    10981 tttggaaatt gcgcccgagt tgtcctgcat tggcggcttc gcgcatcaaa tccaattcgt
    11041 cgtgcaggta tttgtcgaac tccgccacca cttcgcgcgg cttcagacgc ttgccgtctg
    11101 aaaacaagcg ttcgacccaa gccgcgccga aacgcatcag cgacaagtct tgttcgataa
    11161 ggggcaagag gttggggcgc aaaactttga ccgccactcg ttcgcccgaa tgcaggcggg
    11221 ctttgtgtac ttgggcgatg gacgcgctgg cgacgggctc ggtttcaaat tccgcataca
    11281 gcttttcgat gggctgaccc agcgattttt cgatttgttc acgcgaaagc cgcgcgtcaa
    11341 aaggcggcac tttgtcttgc agctttgcca gttcgacggc gtaatcgtgc ggaatcaaat
    11401 cggggcgtgt ggacaaaacc tgcccgaact tgatgaaaat cggccccagg ctttccaagg
    11461 caaggcgcag acggacggca ggcggttcgt ttttcaattt ggacgactgc ggcatcattt
    11521 tcagcagagc gcatatccaa ccgctaccca tcagcgaaac gcacagacct gccagccgat
    11581 agcggtaaaa agtcccgaca atgaccgtca ggcgtttcaa ccatttcata tataaaatcc
    11641 cgaatacagc atttatcgga caatcaaaaa atcttaccga gcagatagcc caaaaaggca
    11701 atcagcaacc cgaaaaccag cggtttgata ttgcggggcg gcggctcggg ttgcgaagat
    11761 gcggaaatat catcttcccg cccgccgtga agttcaagat attcgggcat ttccccatcc
    11821 gcgcctcctc cttcgccctc cccctcctcc ggcggcacga ccgtttccaa ctccatatac
    11881 gggtaataat atccaaaccc aaatagctga aataatcatg caactcttcc cgtttcgccc
    11941 aagtgcattt ttcctcaacc agcacttgcg gtttggaatc gagcgattcg atcaatcctt
    12001 ccgccttttc ttcgccgaga ttctccttaa ggcactcccg gataagcccg cgatccactt
    12061 ggggcgggta ggaaacatat acatcgtaca aatcgtttcg gtaatcttta ctcatctcaa
    12121 tcataaggga acaaatacgc ctgataccgt tccgcccgtt cctttcggga aacccgattc
    12181 atcttcaagc aatcggatta tatgtaaatt catcccgata atatattttc caaaagtaaa
    12241 aatgccgtcc gaacgttcag acggcataac acaaaccagc cggtcacacg gaaaacgacg
    12301 atccgcaacc gcaggttgtt tccgcattcg gattgcggat gacgaactgc gaaccctgca
    12361 gactttccgt atagtcgatt tccgcaccga ccagatattg atagctcatc ggatcgacca
    12421 aaaagaccaa accgtttttc tcaatttcaa aatcgtcgtc gtttttgatt tcgtcaaaag
    12481 taaatccgta ctggaaaccc gaacagccgc cgccgttgac aaaaacccgc aatttcaaat
    12541 cgggattgtt ttcttcggca atcaaatcgg caactttggc acagcagctg tcagtaaaaa
    12601 taatagggct ttcgtccgac atggtgttat tccttaatat aatattttct gcattctctc
    12661 tcaacccccc ttcaaaggca agcagggctt cgcctttgaa aaaggaattg tcccaataga
    12721 taagtttgac cgcctgcaat ttcaagcccc aaactcaaac cgtcctgccg aaccactcga
    12781 cacgcccgat aatctccaca tcatcggtca agtcgttcaa attgatttca aaagcaggat
    12841 aagcctcgtt ggcggaaatg acattgataa tcccgccggg gacgatttgc aggcgtttga
    12901 ccaacagatt ttcattaatc cgcaacacat acagtccgtc tctcggcgta ttttccccat
    12961 gattgaccaa aatcgaatct ccgtcattca aaaccccctc catcgaatcg cccttgacgg
    13021 aaattacaga caggtttttc gtatctcggg taacataatt ctcaatccaa tgccgtctga
    13081 acgccattgt aaataccggt tcctcatgac cgacaaactg cccgtatccc gcagccgccc
    13141 gaatatcata tctcggcaca aagacaaact cgtccgtatc aacttcattt cccaaggtat
    13201 cgtaagcaag ggattttttt ggggcttcat ccggaaacgg attaccctcc cctgtcagca
    13261 gccaatcgat actacacccc ttcaactgct taattttttt caatgtttca gacttcggca
    13321 gaccgccttc attccatatt ctgctgaagc ccgcaatcgt catttcaata tcggatgcga
    13381 tttttgcctg cctcgcttca cttttccata aaaaaaccag tctgtcttta aaggtttcca
    13441 taaatatcct tccgctcccc ttcattcaat catctaaagt aaacatgaaa tatat
//
LOCUS       DAXGCP010000064        13417 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.064, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000064 DAXGCP010000000
VERSION     DAXGCP010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13417
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.064"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(353..1708)
                     /gene="xseA"
                     /locus_tag="ACFJCW_001554"
     CDS             complement(353..1708)
                     /gene="xseA"
                     /locus_tag="ACFJCW_001554"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HFC4151659.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAQPLKEGDHIEVAGKISIYEARGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPAAVQGAGSGFQIAQAIKTASQRAECDVLIVCRGGGSIEDLRAFNE
                     EPVVRAIEACTIPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLVQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNLRA
                     HTARFERQTQALQHCRPDVSVYRQDIVRLQTALPAAFSRLLARRRQSLTAQAALLEAV
                     SPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHITFSDGETDVRVSKEQGQQDLFDC
                     I"
     gene            1905..2726
                     /gene="nadE"
                     /locus_tag="ACFJCW_001555"
     CDS             1905..2726
                     /gene="nadE"
                     /locus_tag="ACFJCW_001555"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HFC4151660.1"
                     /translation="MMRIFSTGGKMDTQAVITHIVRWLDEYAAQANAKGFVVGVSGGI
                     DSAVVSTLAARTGRTTLLLDMPIRQHPGQLERARRHIRNLQGQYANVSAQTANLTDTF
                     QTFEQTVGVHQTAFANQPLSLANARSRLRMLTLYYYGQIHGLLVTGTGNKVEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRRREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(2797..3270)
                     /gene="dnrN"
                     /locus_tag="ACFJCW_001556"
     CDS             complement(2797..3270)
                     /gene="dnrN"
                     /locus_tag="ACFJCW_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HFC4151661.1"
                     /translation="MTDFSVWEAAPFGATVDHILQRYHNVHRAQFEELVPLAQKVAQV
                     HADTFPAEIAGLLADMRDELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTGNFHAPEGACGSWTRLYALAKEMADDLNDHIHLENDILFARVLDS"
     gene            3568..3900
                     /gene="trxA"
                     /locus_tag="ACFJCW_001557"
     CDS             3568..3900
                     /gene="trxA"
                     /locus_tag="ACFJCW_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HFC4151662.1"
                     /translation="MSSELIVHTGDAAFEQDVLKSDLPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(3952..4899)
                     /locus_tag="ACFJCW_001558"
     CDS             complement(3952..4899)
                     /locus_tag="ACFJCW_001558"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC4151663.1"
                     /translation="MTDITPFANRLGKNIKHLMKWAKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFEPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVIAENGRKFWVNLDKYLDTGFFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWARRNFELNGIDMERHKIVRADVFQYLQTAY
                     GEGRQFDLIVMDPPSFSNSKKMPGILDIQRDHQKLIDGAVNLLASDGILYFSNNLRSF
                     VLDDSVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            5227..6615
                     /locus_tag="ACFJCW_001559"
     CDS             5227..6615
                     /locus_tag="ACFJCW_001559"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC4151664.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGCDIM
                     ASAQTGSGKTAAFLLPTLQRLTKRSEKPGKGPRALVLAPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGTSFGYQTRALSKPVDLIVATPGRLTDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPADRQTLLFSATWDGAVGKLARKLTKDSEIIEVERVDGQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLTDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSASGKPKG
                     KGGWGDRKSGGRRGDHKPGKEGFGGKTRGEGFKKEGFKKDSFKKTGEGFKGKRKVGDS
                     FAGKSERRYKDR"
     gene            complement(6729..6835)
                     /locus_tag="ACFJCW_001560"
                     /pseudo
     CDS             complement(6729..6835)
                     /locus_tag="ACFJCW_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(6966..7166)
                     /locus_tag="ACFJCW_001561"
     CDS             complement(6966..7166)
                     /locus_tag="ACFJCW_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009348581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151665.1"
                     /translation="MPSEGLSDGIFVFVRGIVMLPFDFQTAFCFQAFDVGMAILIYVR
                     WQGGIVIPPLGFQTASYRTVKP"
     gene            complement(7180..7734)
                     /locus_tag="ACFJCW_001562"
     CDS             complement(7180..7734)
                     /locus_tag="ACFJCW_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151666.1"
                     /translation="MKKIIASALIATFALTACQDDTQARLERQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAQAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLIGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPVNYRRPAMRGFGRRR"
     gene            complement(7819..8320)
                     /locus_tag="ACFJCW_001563"
                     /pseudo
     CDS             complement(7819..8320)
                     /locus_tag="ACFJCW_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8417..8626
                     /locus_tag="ACFJCW_001564"
     CDS             8417..8626
                     /locus_tag="ACFJCW_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151667.1"
                     /translation="MGWISSKRKKAPHVCVVPIAVSGCKRFALHDEMPSEDKNIGEIL
                     NQNAAAPQALYRNFFVFFSYPVENI"
     gene            8725..9918
                     /locus_tag="ACFJCW_001565"
     CDS             8725..9918
                     /locus_tag="ACFJCW_001565"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HFC4151668.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVKHSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQAARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGTMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINAPETLHNVRSQGQKLQTALLDLGRKTGLFSQVRGMGLLLGCAL
                     DTPYRGRSSEIAATSLKHGVMILVAGADVLRFAPSLLLNDEDIAEGLRRLEHVLTEFA
                     AANRP"
     gene            complement(10025..11269)
                     /gene="clpX"
                     /locus_tag="ACFJCW_001566"
     CDS             complement(10025..11269)
                     /gene="clpX"
                     /locus_tag="ACFJCW_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HFC4151669.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEG
                     DNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIGQGQAKKALAVAVYNHYKRLRHP
                     KADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            11452..11823
                     /gene="rbfA"
                     /locus_tag="ACFJCW_001567"
     CDS             11452..11823
                     /gene="rbfA"
                     /locus_tag="ACFJCW_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HFC4151670.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITINEVE
                     ITRDYSHATVFYTVLNQDTREITEEVLEHARGHLRSELSKRIKLFKIPELHFKYDESL
                     ERGMSLSALIDQVAAEKPVED"
     gene            11834..12358
                     /locus_tag="ACFJCW_001568"
     CDS             11834..12358
                     /locus_tag="ACFJCW_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151671.1"
                     /translation="MNNLIPEHLAAYAHSDNLQIEGGHRCFSLSCQGRDTFHIRYYGE
                     PFDGLITDTDKAPVKIVAVEAVSGDEIVLFDGAEHGYNAMFCDKYSQNQKQNRTLTDL
                     DEYTYRVPIHLYYNIDYEDEYEDFVNSEGQVPLIDGRIISFDSLKRNGFDAISIDLID
                     EKHSVRELLNEELS"
     gene            12416..13336
                     /gene="truB"
                     /locus_tag="ACFJCW_001569"
     CDS             12416..13336
                     /gene="truB"
                     /locus_tag="ACFJCW_001569"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HFC4151672.1"
                     /translation="MTNKPAKRPVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHTG
                     VLDPLATGLLPVCFGEAAKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIAAARADI
                     SLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKPRDITVYSIDIA
                     EFDAPKAVISVRCSKGTYIRTLSEGIAKHIGTFAHLTALRRTETAGFTIAQSHTLEAL
                     ANLDETERDNLLLPCDVLVSHFPQTVLNDYAVHMLQCGQRPRFEEDLPSDTPVRVYTE
                     NGRFVGLAEYQKEICRMKALRLMNTAASAA"
BASE COUNT         3114 a         3606 c         3570 g         3127 t
ORIGIN      
        1 ttccgacaaa ttcctgcggc tttccgcttc cggattcccg ctttttaggg actggattcc
       61 cgttttcgcg ggaatgacgg cggcaggttg ctgttttttt gtttataaat ttctgtaact
      121 ttgaatttca gccatcttca ataaattatc gaaacgtatc aatcgtcatt cccgcgcagg
      181 cgggaatccg ttttttgagt ttcagtcatt tctgataaac cccggcggct ttccgcttcc
      241 ggattcccgc ttttgcagga atgacgaatt aaagattatc ttaaggtcaa gggactgggt
      301 tcccgctttc gcgggaatga cggcggaggg ggagcggttt ttccgattgg gtttaaatgc
      361 aatcgaacaa atcctgctgc ccttgttctt tgcttacgcg cacgtcggtt tcgccgtcgg
      421 agaaggtaat gtgcagcttc tgcccctgct tcaaaacatc ggcgttacgg atgacttgtc
      481 cgcgtgtatt tttgacaacg gagaagccgc gttccagaat gtgctgcggc gaaacggctt
      541 cgagcaatgc ggcttgggcg gtcaggcttt gacggcgacg ggcgagcagc cggctgaagg
      601 cggcgggcaa tgccgtctga aggcggacga tatcttgccg gtaaacggaa acatcaggac
      661 ggcaatgttg cagggcttgg gtttggcgtt caaaacgggc ggtgtgggcg cggaggtttt
      721 gcgtcatcga gtaagacagc gtttgcgcca gcttgccgat tgaagcgcgc tgctcgtcaa
      781 gtttttggcg cgggtggcgg atttgccgcg cgagccagtc gagtttttgg ctggcatcga
      841 aatagcgttg ctccaaaacg gttttcagac ggccttgggc ttggacgagg cggtgcagtg
      901 attcttggcg gttggggctg accagttccg ccgcgccggt cggcgtgggc gcgcgcacgt
      961 cggcaacgaa atcggcgagc gtgaaatcgg tttcgtgtcc cacgccgctg acgacgggaa
     1021 tcgtgcaggc ttcgatggcg cgcacgaccg gttcttcgtt aaacgcccgc aagtcttcga
     1081 tgctgccgcc gccgcgacag acaatcagca catcgcattc ggcgcgttgc gatgcggttt
     1141 taatcgcttg ggcaatctga aacccgctgc ccgcgccctg aacggcggcc ggataaacga
     1201 tgacggggat ttcgggcgcg cggcgtttca aggtggttac gacatcgcgc aaagccgccg
     1261 ccgccagact ggtaacgatg ccgatacatt gcggacggac gggcaaaggt tttttgcgtt
     1321 ccgccgcaaa cgcgccttcc gcctgcaact gcgccttcaa ccgctcgtag gcttcgtaaa
     1381 gctgccccaa acctttgagc cgtacttcgt ttacggtaat ctgaaattcg ccccgcgcct
     1441 cgtaaatact gattttgccc gccacttcga tatggtcgcc ttctttcaaa ggttgcgcca
     1501 aacgcgccgc cgcacccttg aacatcgcgc aacgcacctg cgcgcggctg tctttgagtg
     1561 agaaataata atgcccgctg gcggcgcggg tcagattgga cacttcgccc gcaatccaca
     1621 ggccggcaag gtggttttcc aaaatacttt tggcaaatgc gttcaactcg gaaacggaca
     1681 acacgtcaga atgaaaaaaa tcagacatcg aatcaatcaa ataataaaaa atatgaatat
     1741 gttttgaagc ccaaggcggc atcgtgccgt ctaaattgtc aacaatatta taacacgcgc
     1801 catcttgccg ccagcctttt cctatatgac ttttttaagc ggggaatggg aaaaatattc
     1861 atcaacccgc cctcaatcta ttcaaattgc accgccggca ggctatgatg cggatatttt
     1921 cgacaggagg aaaaatggat acgcaggcag ttatcacaca tattgtccga tggttggacg
     1981 aatacgccgc tcaggcaaat gcaaaaggat tcgtcgtagg cgtttccggc ggcatcgatt
     2041 ccgccgtcgt ctccacgctc gccgcccgca ccggccgcac cacgctgctt ctggatatgc
     2101 cgatacgcca acaccccggc cagcttgagc gggcaaggcg gcacatccgc aatctgcaag
     2161 ggcaatatgc caatgtaagc gcgcaaacgg ccaatctgac cgacaccttc cagacctttg
     2221 aacaaaccgt cggcgttcat cagacggcat ttgccaatca gccgctttcg ctcgccaacg
     2281 ccagaagccg cctgcgtatg ctgaccctgt actactacgg gcagatacac ggactgctgg
     2341 ttacggggac aggtaataag gttgaagatt tcggcgtggg tttttttacc aaatacggcg
     2401 acggcggcgt ggacatcagc ccgattgccg acctgaccaa aacgcaggtt taccggcttg
     2461 ccgaagcatt gggcgtggac gaggcgattc aaaaagcccc gccgaccgac ggcctgtggg
     2521 atacggaacg caccgacgag gaacagatgg gcgcaagcta tcccgaactg gagtgggcaa
     2581 tgggcgtgta cggcacgcgc aaacccgaag attttgaagg acggcggcgc gaagttctgg
     2641 aaatctatac gcggcttcac cgcgcgatgc agcacaaaat caacccgatt cctgtgtgcc
     2701 gcattccgcc cgaattgctg ggctgaaaca tgaaaatgcc gtctgaaacg gaaaaaccgt
     2761 atttcagacg gcattgaaat atccgactcc tatcccttaa gaatcgagta cgcgggcaaa
     2821 cagaatatcg ttttccaaat gaatgtggtc gttcaaatcg tccgccattt cttttgccag
     2881 cgcgtaaagg cgcgtccaac ttccgcaagc cccttcgggt gcgtggaaat taccggtcag
     2941 ctctttgagc cgtgcgatgg cgcggtcgtg ttcttcatgt tcgtgcatca tcacgctgat
     3001 gggcatcgcc gcaccgcgtc cgacaccctg attaatcatc ggaaacagca tccgctcttc
     3061 cttcatcata tgcatcagca gctcgtcccg catatcggca agcagcccgg caatttccgc
     3121 cggaaaggta tcggcatgga cttgggccac tttctgcgcc agcggcacca attcttcaaa
     3181 ttgtgcgcgg tggacattgt ggtagcgttg caggatatga tcaacggttg cgccaaaggg
     3241 agcagcttcc caaacggaaa aatcagtcat tgcagtgttc cttttatagg gtttcgggtt
     3301 tggttttgaa cattcatact ttaagaatct atttaaacgg agcatacacc gcccgcgcgt
     3361 ttctgtacag cctcaaaaac attccttata ctttgataat aaaagtaatt ttcaaaaata
     3421 aaatactgtc cgaaccgttt tttagaattt gcaaaggcga ttggggcggt acagaaaaac
     3481 tattatcccg cccgcccact tgaaattttt atgcccaagc cctatcctgc acgctatcgt
     3541 gcgaatccca accgaaaagg aaaaataatg agcagcgaat taatcgtaca caccggcgat
     3601 gccgccttcg agcaagatgt tttgaaatcc gacctccccg tcctgctgga cttttgggct
     3661 ccgtggtgcg gcccctgcaa aatgattgcc ccgattttgg acgacattgc cgccgaattt
     3721 gaaggccgtc tgaaagtagt caaaatcaac atcgacgaca acgaagccac cccgtcccgt
     3781 ttcggcgtgc gcggcattcc gaccctgatg gtgttcaaaa acggcgaagt cgtcgccacc
     3841 aaagtcggcg cattggcaaa aggtcagctg accgcctttg tcgaagcctc catcgcctga
     3901 taaagcgcaa tcgaaaagcc gccggaagat tccggcggct ttttcgcacc cttaagattt
     3961 gtggcggatt tcccaacacc ggtggatttt tttgttgcgg aaatcttcgg gaacggattg
     4021 tttggaaatg tctttcacgg cgtattgttc cgataccgaa tcgtccaaaa cgaagctgcg
     4081 caggttgttg gaaaaataca aaatgccgtc tgaagcgagc aggttcaccg cgccgtctat
     4141 gagtttttga tggtcgcgct ggatgtcgag gatgccgggc attttcttgc tgttggaaaa
     4201 actgggcggg tccatcacaa tgaggtcgaa ctgcctgcct tccccatatg ccgtctgaag
     4261 gtattggaac acgtcggcgc ggacgatttt gtgccgttcc atatcgatgc cgttcaattc
     4321 aaaattgcgc ctcgcccaat cgagataagt gttggacaaa tcgacggttt cgctggatgc
     4381 cgcgccgccg gtggcggcat agacggtgaa gctgccggtg taggaaaaca ggttcaaaaa
     4441 acgtttgccc gccgccgttt cgccgacttt tttgcgcgtg ttgcggtgat cgaggaagaa
     4501 gccggtgtcg aggtatttgt cgaggttgac ccaaaacttg cggccgtttt cggcaatgac
     4561 gaaatcgtcg cccgccttgc cggttttctc gtactgctgc aaaccttttt ggcgttcgcg
     4621 gcgtttgaga cggatttgtt cgggttcaaa accggtaacg aaagcgacgg cttccaatac
     4681 ttcggcaagc cacgcttcgt attcttcggg ccgcatcagc cagccggtat cgtattcctg
     4741 aaggtggatt cgatcgccgt aaacatcggc ggcaaaaggg aattggggga tgtcgcggtc
     4801 gtaaatgcgc caagcttcga tgccgttgcg tttcgcccat ttcataaggt gtttgatgtt
     4861 tttgcccaag cggttggcaa acggtgtgat gtcggtcatt gatttcaggc ggaataaagt
     4921 ggaaaacgga aattttactg taattaacgc ccgattgctt gaccttttcg ggcaaaccct
     4981 ataccattct ccgtttatat cgtcatacga agccatcgcc ttccaaccta aaccaccctt
     5041 acgggcgcgt ttcttttgtt gctttgatct tgcaaagcgt atctgtgcag gttgccgtcg
     5101 atgtaaacca caagcaagcc gcttgcgaca accctgtaac ttcacattcc ccgtatcgtt
     5161 acccttccct gcttcaggcc gtctgaacct ttcggacgcg ggcgttgttg tcttccaagg
     5221 atagccatgt ctattaaatt tgccgatttg aaccttgata aaaacatttt gtccgccgtc
     5281 agcagcgagg gttacgaaag cccgacgccg attcaggcgc aagctattcc gtttgctttg
     5341 gaaggctgcg acatcatggc ttcggcgcaa accggctccg gaaaaaccgc agcctttctg
     5401 ttaccgactt tgcagcgact gaccaaacgc agcgaaaaac cgggcaaagg cccgcgcgcg
     5461 ctggtgttgg caccgacccg cgaactggcg gcgcaagtcg agaaaaacgc gctggcgtat
     5521 gccaaaaata tgcgctggtt ccgcaccgtc agcatcgtcg gcggcacatc gttcggctac
     5581 caaacccgcg ccctgagcaa accggtcgat ttgattgtcg ccactccggg ccgtctgacg
     5641 gacctgatgc aaagcggcaa agttgatttt gaacgtttgg aagtgctgat tttggacgaa
     5701 gccgaccgta tgttggatat gggctttatc gacgacatcg aaaccatcgt ggaagccacc
     5761 ccggccgacc gtcagacttt attgttctcc gccacttggg acggcgcagt cggcaaactg
     5821 gcgcgcaaac tgaccaaaga ctctgaaatt atcgaagtcg aacgcgtgga cggccaaggc
     5881 aaaatcgaag agcagttgtt gtactgcgac gatatgcgcc acaaaaaccg cctgctcgac
     5941 cacatcctgc gcgatgccaa catcgaccaa tgtgtgattt tcacgtccac caaagcgatg
     6001 accgaagtca tcgcggatga attgtacgaa aaaggtttcg ccgccaactg cctgcacggc
     6061 gatatgccgc agggctggcg caaccgcacg ctgacggatt tgcgtaaagg ccgctgcaaa
     6121 attttggttg ccaccgacgt tgccgcacgc ggtattgacg taccgaccat tacccacgtc
     6181 ataaactacg acctgccgaa acaggcggaa gactacgtcc accgcatcgg gcgcaccggc
     6241 cgcgcaggcc gcacgggtat tgcgattacg tttgccgaag tgaacgaata cgtcaaagtc
     6301 cacaaaatcg aaaaatacat taaccgcaaa ctgcccgaac tgaccatcga aggcatggag
     6361 ccgacccgca aacgcaaatc cgcaagcggc aagccgaaag gcaaaggcgg ctggggcgat
     6421 aggaaatccg gcggccggcg cggcgatcat aaaccgggca aagaaggctt cggcggcaaa
     6481 acgcgcggcg aaggtttcaa gaaagaaggc tttaagaaag acagtttcaa aaaaaccggc
     6541 gaaggcttca aaggcaaacg caaagtcggc gattcttttg caggcaaaag cgaacgccgt
     6601 tacaaagacc gctaagcccc aacctgccgc gtaaaccaat gccgtctgaa accgatttcg
     6661 agtttcagac ggcatttttg taatgtttca gcaccgcccg gctttgatac ccaaaggatt
     6721 aatctgcaat atagtggatt aaatttaaac cggtaccgcg ttgcctcgcc ttgccgtact
     6781 atctgtactg tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctataaaaac
     6841 ccttttccgc tttggcaacg attgaaaatt tccgtaaatt caaatatcta gattccttcc
     6901 tgcgtgggaa tgacgcagaa gggtttcaga tgcaggatgg gcattcctgc ctacccaatc
     6961 tcgccctacg gcttgacggt tcgatatgat gccgtctgaa aacccaacgg cggtatgaca
     7021 atgccgccct gccaacgcac gtagatcaga attgccatcc cgacatcaaa cgcttggaaa
     7081 caaaatgccg tctgaaaatc aaacggcaac ataacaatgc ccctaacaaa tacaaaaatg
     7141 ccgtctgaaa gcccttcaga cggcattggc gcgccgggtt taccgccttc tgccgaaacc
     7201 gcgcatagcg ggacggcggt aattgacggg cgggcgcgtt gtcgggcggt aacgctgcgc
     7261 ctgcgccgcc tgttgttttg cacggaggct gcgcgtgttc aaatccctgc tggtgcgcgc
     7321 attagggcgt gcggactgat ggtaggcagc acgcgcgcga cgggcgacgg ggctgtcttg
     7381 gttgcccgcc cgtgtgaatt tgtttgccag cgcgttgccg ataaacgcgc ctgccgccgc
     7441 gccaatcagg ctttgcagca gccagcttcc tgtcgattgg tcgtaaatat actgctgccc
     7501 gtctttgccg gtaacgggct gaccgttgtt gccgtttgcc tgcgcctggg caggaatggt
     7561 gtctttgact gcttcgggag tcagttggta aaccgtatcg tctgcctgct gtgcgagctg
     7621 ctgttgcagg gcttcaatct gtttctgctg ccgttcgagc cgcgcctgcg tgtcgtcttg
     7681 gcaggcggtg agtgcgaatg ttgcgataag cgcggaggcg atgatttttt tcatgtgtgt
     7741 cctgttcggg tggaaaatcg gttgtattgt atcgccgtcg ggaattttgg caagcattct
     7801 gccggcaaat cgtgatgttt acaggggtag ggtgtgcagt ttgcggacaa atgcgaggct
     7861 gttggcgaca gggttgcctt tgttttcgac ttcgtgttcg gtttctatgg tcagcaggcg
     7921 gcggtttttg tgtttgttca ggctcaattc ggcttgtgcg ggtgtgaaaa acaggcggtg
     7981 tttttcggca aagcggcagg cgcgcttgtt tgcggttttc aaaatctgaa gcagcgatac
     8041 gtccagatgg aagcgtcgca cgcccaatac gagaatccgt gcggcaaaaa aaatcggcgg
     8101 catcggtaaa ctcggcgggg ctgctgcggc tgaagtcgtg ccgttcggcg gctatcaggg
     8161 cggcaacggt gcggatttgc ggaatcatcg attcgctgat gagcgtgtcg tcccgccctg
     8221 catcgagaag catgggggaa aaatcctgcg catcatcgac aataatgctg caagtgtgca
     8281 ggttttcgtt ttgtacggcg gtttggggca ttgcatccat ggtcattttc ctgattctgt
     8341 cgtgtgttgc cgaatcgggc gacctgtgtg aaggtaacaa aaaagccgcc ccgttttcga
     8401 gcggcctgtt ttgcgtatgg gatggatttc aagcaagcgc aaaaaagcac cgcacgtctg
     8461 tgtggtacca atagcagtaa gcggttgtaa acgttttgcc ttgcatgatg aaatgccgtc
     8521 cgaagataaa aatattgggg agattctaaa tcaaaacgct gccgcgcctc aagcattata
     8581 tcgaaatttt tttgtttttt tcagctatcc ggttgaaaat atttaggttt atttttacca
     8641 ctgcccgata ttgtcggcaa tttcccttta tccgccttga aaaacggtgc ataatcccga
     8701 acaaaaccgc aatcaggagc aattatgcaa aactatctga cccccaattt cgcctttgcc
     8761 ccgatgattc ccgaacgcgc ttcaggcagc cgcgtttggg atacggaagg gcgtgaatat
     8821 attgattttt caggcggcat cgccgttaac gctctggggc actgccaccc tgcccttgtc
     8881 gatgctttaa acgcgcagat gcacaagctg tggcacattt ccaatatcta tacgacgcgg
     8941 ccggcgcagg aattggcgca aaaattggtg aaacacagtt ttgccgacaa ggtttttttc
     9001 tgcaactcgg gcgcggaagc gaatgaggcg gcgttaaagc tggcaaggaa atatgcgcgc
     9061 gaccgtttcg gcggaggcaa aagcgaaatc gtcgcctgta tcaacagttt ccacggacgc
     9121 acgctgttta ccgtgtccgt cggcggacag ccgaaataca gtaaggatta tgcaccgctg
     9181 ccgcaaggca ttacgcacgt tccgttcaac gatattgccg cactggaagc tgccgtcggc
     9241 gaacagacct gcgcggtcat catcgagccg atacagggcg aaagcggcat cctgcccgcc
     9301 actgcggaat atttgcaggc ggcgcgccgt ctgtgcgacc ggcacaatgc gttgttgatt
     9361 ttggacgaag ttcaaaccgg gatggggcat acgggcaggc tgtttgccta tgaacattac
     9421 ggcgttgttc ccgatatttt gagttcggca aaagccttgg gctgcggctt tccgatcggc
     9481 acgatgctgg cgacagaaaa gattgccgcc gccttccaac cgggcacgca cggctcgact
     9541 ttcggcggca acccgatggc gtgtgcggtc ggcagccgcg ccttcgacat catcaacgcg
     9601 ccggaaacct tgcacaacgt ccgcagtcag gggcagaaac ttcagacggc attgctggat
     9661 ttgggcagga aaacaggctt gttctcacag gttcgcggga tggggctgct gctcggctgc
     9721 gcgttggaca cgccttatcg cggacgctca tccgaaatcg ccgctacctc cttgaaacac
     9781 ggcgtgatga tcttagttgc gggtgcggac gtattgcgtt tcgcgccttc gctgctgttg
     9841 aacgatgagg atattgcgga aggtttgcgg cgtttggaac acgtgctgac ggaatttgcc
     9901 gccgcaaacc gcccctaggc agaaagcaga tgccgtctga agacgggaag gcctcagacg
     9961 gcatcagaaa caaaaaaccg cttcggaaac gtgatccaac gttccgaagc ggttttgttt
    10021 gccatcagga ctcgaacacc aattccggtt ccctgccctc ttcgatgact gccttgccga
    10081 ccaccacttt tttcaagcct tgcaaatcgg gcaggcggta catcgtatcg agcaggcagc
    10141 gttcgacgat ggaacgcagg ccgcgcgcgc cggttttgcg ttccattgcc tgccgcgcga
    10201 tggaacgcaa tgcgccttct tcaaattcca acccgacgtt ttctatgccg aacaaggctt
    10261 gatactgctt gaccaaagcg tttttcggct cggttaaaat attaatcagc gcgtcctcat
    10321 ccagttcttc taaagttgca atcacgggca aacgtccgat taattccgga atcaggccga
    10381 atttgattaa atcttccggt tcgacgatgc cgaacagctt ggtaatgccg gcattttcgt
    10441 ccttgctgtg aacggacgcg ccgaaaccga taccaccttt ctcggtgcgc tggcgaatca
    10501 ctttttccaa gcctgcaaac gcgccgccgc agataaacag gatgttggcg gtatcaacgt
    10561 tgataaattc ctgattcgga tgcttgcgtc cgccttgggg cggaacgctt gccaccgtac
    10621 cttcaatcag tttcagcaag gcttgctgca cgccttcgcc ggacacgtcg cgcgtgatgg
    10681 acgggttgtc gcttttacgc gaaattttgt caatttcgtc aatatagaca atgccgtgct
    10741 gggctttttc gacatcgaaa tcgcatttgc ccaacagttt ggtaatgatt tgttcgacat
    10801 cttcgccgac atagccggct tcggtcagcg tggtcgcatc cgccatcacg aacggcacgt
    10861 ccagtttgcg tgccaaagat tgcgccaaca gcgttttacc cgatccggtc gggccgataa
    10921 gcaggatgtt ggatttcgac aattcgacac cgccgtcggc tttcgggtgg cgcaggcgtt
    10981 tgtaatggtt gtaaaccgca accgccagcg cctttttcgc ctgcccctgc ccgatgacat
    11041 aatcgtcgag gttggcaacg atttcggcgg gcgtgggcag tttgccggat tcttccggct
    11101 cccctccggc attttccgga ggcgtgccgc cgttgtcgcc ttcgtacaat atttcgaggc
    11161 agtttgagac gcattcgtcg cagataaagg cgttttcgcc ctcaatcaaa tgtttgacgt
    11221 gtgatttgga ttttccgcaa aaggaacagg tacggttttc gttggacatg gctttcttta
    11281 caatgtgtgc gttgcagaaa cggcatgcgc cgttcgggtt gccaagtata ataactatat
    11341 ccgtgcttat caacgtatta ccttaaaatc ccgccgattc ggctataata cgcccctttg
    11401 caaccgcccc ggcggcagaa atgccgtctg aaaccaaatc tgaggatatt catgagaaaa
    11461 ccccaacgcg gctacgcccg ccaagaccgt gtcaaagaac aaattatgcg cgagcttgcc
    11521 gaactcgtcc gtaccggact gaaagacccg cgcgccggct tcatcactat caacgaagtc
    11581 gaaattaccc gcgattacag ccacgccacc gtgttctaca ccgttttgaa ccaagatacg
    11641 cgcgaaatta cggaagaagt gctggaacac gcgcgcggac acctccgcag cgaattgtcc
    11701 aaacgcatca agctgttcaa aatccccgaa ctgcatttca aatacgacga atctttggaa
    11761 cgcggtatga gcctgtccgc ccttatcgat caagtggcgg cggaaaaacc ggttgaagac
    11821 tgatactgcc agaatgaaca atctgattcc cgaacattta gccgcctatg cacatagtga
    11881 taacctgcaa attgaaggcg ggcatcgttg cttttcatta tcctgccaag gtagagatac
    11941 tttccacatc cgttactatg gagagccttt tgatggattg attaccgata ctgataaggc
    12001 gccggtaaaa attgtggcgg tagaagctgt aagcggcgat gaaatcgtat tgtttgatgg
    12061 ggcggaacat ggctataacg ctatgttctg cgacaaatat agccaaaatc aaaagcaaaa
    12121 cagaacgtta actgatttgg atgaatatac ttaccgagtt ccgattcatc tttattacaa
    12181 tatagactac gaagatgaat atgaagattt cgtcaattct gaaggacaag tccccttaat
    12241 tgatggccgc atcattagtt ttgactcatt aaaacgaaat ggctttgatg caatcagcat
    12301 tgatctaatt gatgaaaaac actctgttcg tgaattattg aatgaagaat taagctgaca
    12361 cgcaggccgt ccgaaccctt tcagacggtc tgaacattaa tattccctaa ttaatatgac
    12421 caataaaccc gccaaacgcc cggtcaacgg cgttcttctt ctcgacaaac ccgaaggcct
    12481 ttccagcaac accgccctgc aaaaagcgcg gcgtttgttt catgccgaaa aagcagggca
    12541 taccggcgtg ctcgatcctt tggcaaccgg acttttgccc gtctgcttcg gcgaagcggc
    12601 caagttcgcc caatacctgc tggatgccga taaagcctac accgccacgc tgaaactcgg
    12661 cgaagccagc agcacgggcg atgccgaagg agaaatcatc gccgccgccc gcgccgatat
    12721 ttccttagcc gaatttcaga cggcctgcca agcactgaca ggcaacatcc gccaagtgcc
    12781 gccgatgttt tccgccctca agcacgaagg caaaccgttg tacgaatacg cgcgcaaagg
    12841 cattgttatc gaacgcaaac cgcgcgacat taccgtttac tctatcgata ttgccgagtt
    12901 tgacgcgccc aaagccgtga taagcgtgcg ttgcagcaaa ggcacctaca tccgcaccct
    12961 cagcgaaggc atcgccaaac acatcggcac attcgcccac ctgaccgccc tacgccgcac
    13021 cgaaaccgcc ggctttacca tcgcccaaag ccacacgctc gaagccttgg caaacttgga
    13081 cgaaacagaa cgcgacaacc tgctgctgcc ctgcgacgta ttggtttcac actttcccca
    13141 aaccgtttta aacgattatg ccgtccatat gctccaatgc gggcaacggc cgcgtttcga
    13201 ggaagacctg ccttccgata cgccggtacg cgtttacacg gaaaacggcc gctttgtcgg
    13261 tttggcggaa tatcaaaagg aaatatgccg tatgaaagcc ttgcgcctga tgaacacggc
    13321 ggcatccgcc gcctgagcgg cggttaaaaa tacgggctgt gtttgaataa tatgttgata
    13381 tttccgcaaa atcccgatgc attcggacac ccgcccc
//
LOCUS       DAXGCP010000065        13017 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.065, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000065 DAXGCP010000000
VERSION     DAXGCP010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13017
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.065"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(205..690)
                     /gene="purE"
                     /locus_tag="ACFJCW_001570"
     CDS             complement(205..690)
                     /gene="purE"
                     /locus_tag="ACFJCW_001570"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HFC4151673.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFEYAETARARGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAISMLANENPELAQKLADFRAKQEQTVLNMELEQ
                     I"
     gene            complement(738..1451)
                     /locus_tag="ACFJCW_001571"
     CDS             complement(738..1451)
                     /locus_tag="ACFJCW_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HFC4151674.1"
                     /translation="MKTKLPLFIIWLSVSASCASVLPVPEGSRTEMPTQENASDGIPY
                     PVPTLQDRLDYLEGKIVRLSNEVEMLNGKVKALEHTKIHPSGRTYVQKLDDRKLKEHY
                     LNTEGGSASAHTVETAQNLYNQALKHYQNGRFSAAAALLKGADGGDGGSIAQRSMYLL
                     LQSRARMGNCESVIEIGGRYANRFKDSPTAPEVIFKIGECQYRLQQKDIARATWRSLI
                     QTYPGSPAAKRAAAAVRKR"
     gene            complement(1451..2119)
                     /locus_tag="ACFJCW_001572"
     CDS             complement(1451..2119)
                     /locus_tag="ACFJCW_001572"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC4151675.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKAGHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEIGVFTGYSSTALALALPEHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAAFDAPPSVKILKDFNQNLPNDTRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(2130..2315)
                     /locus_tag="ACFJCW_001573"
     CDS             complement(2130..2315)
                     /locus_tag="ACFJCW_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HFC4151676.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELAQERLKNRGLLWDVELNPEEQK
                     NFESAKVAKKPYTYYQD"
     gene            2459..4423
                     /gene="mutL"
                     /locus_tag="ACFJCW_001574"
     CDS             2459..4423
                     /gene="mutL"
                     /locus_tag="ACFJCW_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HFC4151677.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAVD
                     VELEGGGIRLIRVGDNGGGIHPDDIELALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCATMLERLALAHPHIAFSLKRDGKQVFKLPAQSLHERIAAIVGDDFQT
                     ASLEIDSGNSALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLELPPKAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRANLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFDSASNHPTGNKPDTRNAFGSSGKTAPMP
                     YQAARAPQQHSLSLRESRAAMDTYAELYKKTDDIDLELSQFEQARFGNMPSESSTNNV
                     SDGIGQASELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENG
                     NLQSQHLLIPVTFAASHEECAALADHAETLAGFGLELSDMGGNTLAVRAAPVMLGKSD
                     VVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMEN
                     TPRSNQCNHGRPTWVKLTLKELDTLFLRGQ"
     gene            4518..6641
                     /gene="dnaX"
                     /locus_tag="ACFJCW_001575"
     CDS             4518..6641
                     /gene="dnaX"
                     /locus_tag="ACFJCW_001575"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HFC4151678.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYDPPALQLLGRAAAGSMRDAL
                     SLLDQAIALGSGKVAENDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNTLGELAILLQQLALIQAVPSALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLGLAPDEYAGFMMTLLRMLAFAPLAAASCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPEADAAQTPVQTASAAAMPSEGKTAGPVSHQENNDVPPWEDAPDKTETAAGTA
                     RTSAKSIQTASEAETPPENQVSKNKAADNETEASLSEVPSENPIQATPNDEAVETETF
                     AHEAPAEPFYGFPDNDCPPEDGVEIPPPDWANVLPADTAGGGTDEEAEAGGIGGNNTP
                     SAPPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYRSDTGLMVLAMTAEARATAD
                     KKRLDKIRDTLAQAYGLQLTLQTEDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADP
                     AAQKILQAFGAQWQPESLELAANRP"
     misc_feature    5707..5746
                     /gene="dnaX"
                     /locus_tag="ACFJCW_001575"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            6722..7057
                     /locus_tag="ACFJCW_001576"
     CDS             6722..7057
                     /locus_tag="ACFJCW_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HFC4151679.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQDL
                     PPGVGDFFR"
     gene            complement(7710..8756)
                     /gene="recA"
                     /locus_tag="ACFJCW_001577"
     CDS             complement(7710..8756)
                     /gene="recA"
                     /locus_tag="ACFJCW_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HFC4151680.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            8956..9720
                     /gene="aroD"
                     /locus_tag="ACFJCW_001578"
     CDS             8956..9720
                     /gene="aroD"
                     /locus_tag="ACFJCW_001578"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HFC4151681.1"
                     /translation="MHTSLTVKNTVIGSGRTKIAVPLVARDAADLSSVLSQIKNLPFD
                     IVEFRADFLECAGSIGEVLRHTQAVRDALPDKPLLFTFRRHCEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSSEDVLTLLSATLEAKRLVAKPVITMSMGQTGAVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            9740..11755
                     /gene="rep"
                     /locus_tag="ACFJCW_001579"
     CDS             9740..11755
                     /gene="rep"
                     /locus_tag="ACFJCW_001579"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HFC4151682.1"
                     /translation="MMKLNAQQLEAVRYLGGPLFVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAKMLPKPQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNVREQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVIKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIVKQKL
                     IGGDKTRYADFAVLYRGKHQARIFEEALRGARIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQNEEALATLNNTNR
                     QHLQAFMDMFGNYRAKAEIDEAGEFINSLLEEIDYENHLMQNEEGKAGEIKWRNVGEL
                     VSWFARKGERDGKNVIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRIDNLKKSGPAD"
     gene            complement(11825..12883)
                     /gene="dinB"
                     /locus_tag="ACFJCW_001580"
     CDS             complement(11825..12883)
                     /gene="dinB"
                     /locus_tag="ACFJCW_001580"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HFC4151683.1"
                     /translation="MSLRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYDARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     PDEAYLDVTRNFKNIPYAGEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGAGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDEHPVKAERERLQISTEITLPEDLPLGQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCAALLQAAQMLMARVPPQTEDAFRLI
                     GIGVGRLVPKNQQQDLWA"
BASE COUNT         3146 a         3808 c         3399 g         2664 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgccttgtcc tgatttaaat ttaatccact atatatttca
       61 aaaattgaaa cccgcacaga ttgttaaacc ccaaaacagg ggcgggcgaa attcttccgg
      121 caatgggttc atgcaaacaa aatgccatct gaaccccgaa aacagggctt cagacggcat
      181 ttgtgtattc gcggacggcg ggttttaaat ctgttccaat tccatgttta aaacggtttg
      241 ttcctgtttg gctcggaagt ctgccagttt ttgcgccagt tcggggtttt cgttggcgag
      301 catggagatg gcgaacaatg cggcatttgc cgcgcctgcc tcgccgatgg cgaatgtggc
      361 gacgggtacg cctttgggca tttgtacaat cgataaaagc gaatcttcgc cgcgcaggta
      421 tttgcttggg acgggtacgc ccaaaacggg gacggtggtc ttggcggcaa ccatgccggg
      481 taaatgcgcc gcgccgcccg cacccgcgat gatggctttg atgccgcgcg cccgtgcggt
      541 ttcggcgtat tcaaacatca aatccggagt gcggtgtgcg gaaacgacgc gcgcctcata
      601 ttctacgccg aactcttcaa gaaactgcgc tgcctgccgc ataacgggcc aatcgctgtt
      661 gctgcccatg atgatgccga tttgtatcat aaatccttct tggtgcggat ggggtaaaaa
      721 gcggaaaaat ggaaaaacta tcgtttgcgt acggctgcgg cggcgcgttt tgccgccggg
      781 ctgccgggat aggtctgtat caggctgcgc caagtcgccc ttgcaatgtc tttttgctga
      841 agcctgtatt ggcattcgcc gattttgaat atgacttcgg gcgcggttgg gctgtctttg
      901 aaacggttgg cgtaacgccc tccgatttcg atgacagatt cacagttccc catacgcgcc
      961 ctgctttgca gcaacaggta catactgcgt tgcgcgatgc tgccgccgtc tccgccgtcc
     1021 gcccccttca acaaggcggc tgcggcagaa aacctgccgt tttgatagtg tttgagtgcc
     1081 tgattgtaga ggttttgtgc ggtttcgacg gtatgtgcgg atgcgctgcc gccttcggta
     1141 ttgaggtaat gctctttcaa tttgcggtcg tcgagttttt ggacgtatgt cctgccggaa
     1201 gggtgtattt tcgtatgctc caatgctttg actttcccgt ttaacatttc cacttcgttc
     1261 gacagccgga cgattttgcc ttccagatag tccaaacggt cttgcagagt gggaacggga
     1321 tagggaatgc cgtctgaagc attttcctgt gtcggcattt cggttcggct gccctccgga
     1381 acgggtaaaa cggaagcaca ggaggcagac acagacagcc aaatgataaa aagcggtaat
     1441 ttggtcttca ttattttttc agaagcaggg tcaaaccgtc gccgacgggc agggtgatgg
     1501 ggacaatccg cgtatcgttc ggcaggtttt gattgaaatc tttgagaatt ttgacactgg
     1561 gcggcgcatc aaaagccgct tcgcgcatca cccttccgtt caacaaaata ttgtcgatgg
     1621 cgatgatgcc gccttgccgg acgagtttga ggcaacgctc gaaatattgc ggcgtgggcg
     1681 gtttgtctgc gtctatcagt gccaaatcgt agcttccggc ttcaccctgt gcaatcaaat
     1741 catccaatgt cagcaatgcg ggttgcaggt gcaggctgat tttatgcgcc acaccggcct
     1801 cgttccaaac ctgacgcgcc gtatcggtaa aggttacatt gatgtcgcag gcggtaatcc
     1861 gcccgtgttc gggcagcgcc aatgcaagcg cggtgctgct gtatccggta aatacgccga
     1921 tttccagata tttttccgcg cgaatcagct ttgccagcca aaccaaaacc gccgcctgtt
     1981 cgcgcgcaat cgccattttg cccatacggt gatgcccggc cttctcacgc agccgcgtca
     2041 aaacgggatg ttcgggttcg ccgatggcat tcaaatagtt ttgcaggtcc ggtgcgacat
     2101 tggacagatg ggtcgtcatt tcggcgggtt cagtcttggt aataggtata aggttttttc
     2161 gccacttttg ccgattcaaa gtttttttgc tcttcgggat tgagttcgac atcccacaaa
     2221 agccctcgat ttttcaaacg ttcttgcgcc aattcaggtt tttcttcgat caggcggttg
     2281 aggaattgtg tggcttcgga ttggtagtgg tacatctttg cgctccaatt ttacgggata
     2341 cggcgtgatt atactggtat tttccaaacg ggataaacgg cttttatcaa gaatacgggc
     2401 agaaagataa ggggttttat tatagaataa ggcgtttttt gcaacggaag accgccttat
     2461 gccacgcatt gccgccctgc ccgaccacct cgtcaaccaa attgccgccg gcgaagtggt
     2521 cgaacgccct gccaacgccc tgaaagaaat cgttgaaaac agcatagacg cgggcgcaac
     2581 ggcggttgat gtggaactgg aaggcggcgg catccgcctc atccgcgtcg gcgacaacgg
     2641 cggcggcatc caccccgacg acatcgaact cgcgctccac cgccacgcca ccagcaaaat
     2701 caaaaccctg aacgatttgg aacacgttgc cagcatgggc tttcgcggcg aaggcttggc
     2761 cagtatcgcc tccgtcagcc gcctgaccct gaccagccgc caagaagaca gttcgcatgc
     2821 gacccaagtc aaagccgaag acggcaaact cagcagcccc accgccgccg cccaccccgt
     2881 cggcaccacc atcgaagccg ccgaactctt cttcaacacc cccgcgcggc gcaagttcct
     2941 caaatccgaa aacaccgaat acgctcactg cgccaccatg ctcgaacgcc tcgcgctggc
     3001 gcatccgcac attgccttct cactcaaacg cgacggcaaa caagtgttca aacttcctgc
     3061 ccaaagcctg catgaacgta tcgccgccat tgtcggcgat gattttcaga cggcatcttt
     3121 ggaaattgac agcggcaata gcgcgctgcg gctctatggc gcgattgcca agccgacttt
     3181 cgccaaaggc aaaaccgata aacaatattg cttcgtcaac catcgttttg tccgcgacaa
     3241 agtcatgctc catgccgtca agcaggcata ccgcgacgta ttgcacaacg ccctcacccc
     3301 tgctttcgtc cttttcctcg agctgccgcc caaagccgtg gatgtcaacg tccacccgac
     3361 caaaaccgaa atccgcttcc gcgacagccg gcaagtacac caactcgtgt tccacacgct
     3421 caacaaagcc cttgccgaca cacgcgccaa cctgaccgaa agcgtcagca acgcaggcga
     3481 agtgttgcat gacattaccg gcgttacgcc tgccccaatg ccgtctgaaa acgacagcga
     3541 aaatctgttt gatagcgcat ccaaccaccc gacaggcaac aaacccgata cacgcaatgc
     3601 ctttggttca tcaggtaaaa ccgcgcccat gccttaccag gccgcgcgtg cgccgcaaca
     3661 acacagcctg tccctgcgcg aaagccgcgc ggcaatggac acctatgccg aactctacaa
     3721 aaaaaccgac gacatcgacc ttgagttgag ccaattcgaa caggcacgtt tcggcaatat
     3781 gccgtctgaa agcagcacga acaacgtttc agacggcatc ggacaggctt cagaactgcc
     3841 gccgctcggt ttcgccattg cccaattact tggcatctac attcttgccc aagccgaaga
     3901 cagcctgttg ctcatcgata tgcacgccgc tgccgaacgc gtcaactacg agaaaatgaa
     3961 acgccaacgt caggaaaacg gcaacctgca aagccagcac ctgcttattc ccgtaacctt
     4021 tgccgcgtcc cacgaagaat gcgccgccct cgccgatcat gccgaaacgc tggcaggctt
     4081 cggcctggaa ctgtccgaca tgggcggcaa caccctcgcc gtccgcgccg cgcccgtaat
     4141 gttgggcaaa tccgatgtcg tctccctcgc acgcgacgta ttgggcgaac tcgcccaagt
     4201 cggcagcagc caaaccatcg catcacacga aaaccgcatc ctcgccacaa tgtcctgcca
     4261 cggctcaatc cgcgccggcc gcaggctcac cctgcccgaa atgaacgcgc tgctgcgcga
     4321 tatggaaaat acgccgcgca gcaaccagtg caaccacggc aggccgacgt gggtcaaact
     4381 gactttgaaa gaattggaca cactgttctt gcgcggacag taagccgaaa atgctagaat
     4441 acgccgcccg aagccgccgt tcagacggca ttccgacgca ccgacagaaa catcacgacc
     4501 gaaaccaaga gaaaaacatg gcctatcaag ttctcgcccg aaaatggcgg cccaaaacct
     4561 tttccgactt agtcggtcag gaacacgtcg tcaaagccct gcaaaatgcc ttggacgaag
     4621 gcaggctgca ccacgcctac ctgctgaccg ggacgcgcgg cgtgggcaaa accaccatcg
     4681 cccgcatcct tgccaaaagc ctcaactgcg aaaatgcgca acacggcgaa ccttgcggcg
     4741 tgtgccaaag ctgcacccaa atcgatgccg gacgctatgt cgacctgctc gaaatcgacg
     4801 ccgcctccaa cacaggcatc gacaacatcc gcgaagtctt ggaaaacgcc caatacgcgc
     4861 cgaccgccgg caaatacaaa gtctatatca tcgacgaagt gcatatgctt tccaaaagcg
     4921 cgttcaacgc catgctcaaa acgctggaag agccgcccga acacgtcaaa ttcatcctcg
     4981 ccaccaccga tccgcacaaa gtccccgtta ccgtattaag ccgctgcctg caattcgtct
     5041 tacgcaatat gaccgcgcaa caggttgccg accaccttgc ccacgtcctc gacagcgaaa
     5101 aaatcgccta cgaccccccc gccctgcaac ttttgggacg tgccgccgcc ggatcgatgc
     5161 gcgatgcctt aagcctgctc gaccaagcca tcgccctagg ttcgggcaaa gttgccgaaa
     5221 acgatgtccg ccaaatgatc ggcgcggttg acaaacaata cctgtacgaa ctgctgacag
     5281 gcatcgtcaa ccaagacggc gaagccctgc tggcaaaagc gcaggaaatg gcggcgtgtg
     5341 ccgtcggctt tgacaacacc ttgggcgaac tggccatact gctgcaacaa ctcgccctga
     5401 tacaggcagt cccctccgcc ttggcgcacg acgaccccga ttccgatatt ttgcaccgcc
     5461 tcgcccaaac cataagcggc gaacaaatcc agctttacta ccaaatcgcc gtccacggca
     5521 aacgcgacct gggcctcgcc cccgacgaat acgccggctt tatgatgacc ctgctgcgta
     5581 tgctggcgtt cgcccccttg gcggcggctt cgtgtgatgc aaacgccgtg attgaaaata
     5641 ccgaacttca atccccgtcg gcacaaaccg ccgaaaagga aaccgccgca aaaaagccac
     5701 aaccgcgccc tgaagcggat gccgcccaaa cgcccgttca gacggcatcc gcagcagcaa
     5761 tgccgtctga aggcaaaact gccggccccg tttcccatca agaaaacaac gatgttccgc
     5821 cttgggaaga cgcgccggac aaaaccgaaa ccgcagccgg cacggcgcga acgtcggcaa
     5881 aaagcattca gacggcatcc gaagccgaaa cgccgcccga aaatcaagtt tccaagaaca
     5941 aggcagccga caacgaaacc gaggcttcct tgtccgaagt gccgtctgaa aaccccattc
     6001 aggcaacacc gaatgatgaa gccgttgaaa cggaaacatt tgcacacgaa gcccctgcag
     6061 aacctttcta cggttttccg gataatgact gccccccgga agacggcgtg gaaatcccgc
     6121 cgcccgattg ggcaaatgtc ctccctgccg ataccgcagg cggagggacg gacgaagaag
     6181 cagaagcggg cggcatcggc ggaaacaaca cgccgtccgc cccgccgccc gaattttcca
     6241 ccgaaaactg ggcagccatc gtccggcact tcgcccgcaa actcggcgcg gcgcaaatgc
     6301 cggcgcaaca ctccgcgtgg acggaatacc gttccgacac cggactgatg gttttggcaa
     6361 tgaccgccga agcccgcgcc accgccgaca aaaagcggct cgacaaaatc cgcgacaccc
     6421 tcgcccaagc ctacgggctg caactcaccc tgcaaaccga agactggcgc gacgaagccg
     6481 gccgggaaac ccccgcgatg caggacaagc gtgtccaagc cgaagacagg caaaaagcac
     6541 aagcattgct cgaagccgac cccgccgcac aaaaaatcct ccaagcattc ggcgcgcaat
     6601 ggcagcccga atcactggaa ttggcggcaa accggccata aacagatata atgccgcccg
     6661 aacccttcgg acggcattgc cgcttccctc attcattcaa acacaaacag gagtattcag
     6721 tatgttcgga aaagccggat taggcggtct gatgaaacag gcgcagcaaa tgcaggaaaa
     6781 catgaaaaag gcacaagcca aacttgccga aaccgaaatc gaaggcgaag caggcaacgg
     6841 cttggtcaaa atcacaatga cctgcgcgca cgaagtacgc aaaatcgaca tcagccccga
     6901 tttgattcaa gaagccgccg atgacaaaga aatgctcgaa gacctcatcc tcgccgccct
     6961 caaatccgcc cggggcaaag ccgaagaaac cgcaaacaaa acaatgggcg cattcaccca
     7021 agatctgccc cccggcgtgg gcgacttctt ccgctgaccc cgaccgtcat tcccgcgaac
     7081 gcgggaatcc ggtaaccgaa aaaccacagg aatctatcgg aaaaaaacag aaacccccgc
     7141 cgccgtcatt cccgcgcagg cgggaatcta gaacgtagaa tctgaaaaac cgttttactc
     7201 gataaatttc cgtgccgaca ggtctggatt cccgccttcg cgggaatgac ggcatatttt
     7261 ttgcatttga tataaagggt cgtttgaatt ttgttcagca agtgcaaagt attgcacata
     7321 aaagggcgca ggcttcatcc gtaaagtcgg cgcaggatag aggcaaagcg ggcgtaggtc
     7381 gggctgtagc aactgtattt ttcaccccgt cgggtaaaaa tatagtggat taacaaaaac
     7441 cggtacggcg ttgcctcgcc ttagatcaaa gagaacgatt ctctaagatg ctgaagcacc
     7501 aagtgaatcg gttccgtact atagtggatt aaatttaaac cagtacggcg ttgcctcgcc
     7561 ttgccgtact atttgtactg tctgcggctc tccgccttgt cctgattttt gttaatccgc
     7621 tataccaaaa ctcaaatcaa gccgtccgga ggcggctcaa aaaaaacggt acttcgcagc
     7681 agaagtaccg tttatcggga tttcaggttt tattcttcgg gtcgttcgcc gtcggtttcg
     7741 tcctgcgtcc cttcggtgat gtgcatttct acgccgttga gggcgcggat ttttgcgtcg
     7801 atttcgtcgg aaatttcggg gttttctttc agccagacgc ggacgttgtc tttgccctga
     7861 ccgattttcg cgccgttgta gctgtaccac gcgccggatt tgttgatgat gtcgtttttc
     7921 acgccgatgt cgatcaattc gccttcccaa ctgatgcctt ctccgtagag gatgtcaaac
     7981 tctgcctgac ggaacggggg ggcgactttg tttttgatga ctttgacgcg ggtttcgttg
     8041 cccaatactt cttcgccttt tttgatggat ccggtgcggc ggatgtcgag gcggacggaa
     8101 gaatagaatt tcagcgcgtt gccgccggtc gtggtctcgg ggctgccgaa cattacgccg
     8161 atcttcattc ggatttggtt gatgaacaca accagcgtat tggttttttt gatgtgtccg
     8221 gtcagtttgc gcaaagcctg actcatcagg cgcgcctgca gtccgacgtg gctgtccccc
     8281 atatcgcctt cgatttcggc tttggggacg agtgcggcta cggaatcgac gactaccata
     8341 tctatgccgc ccgaacggac gagcgtgtcg cagatttcca aagcctgttc gccggtatcg
     8401 ggctgggaca ggtaaagctc ttcgactttt acgccgagtt tgcgggcgta aacgggatcg
     8461 aaggcgtgtt cggcatcgac aaaggcgcac acgccgccgt ttttctggca ttgggcgacg
     8521 gcttcgaggc agagtgtggt tttgccggag gattcggggc cgaagatttc gacgatgcgc
     8581 ccgcgcggca ggccgccgac tccgagggcg aggtctaatc cgagcgatcc ggtggaaatg
     8641 acttcgaggt tttcttcctg ctggctgccg tccattttca tgatggcgcc tttgccgaaa
     8701 cttttttcga tttgcgccag tgcggcggca agggctttgc ttttgtcgtc tgacatgggg
     8761 gttactccgg aacaaatgcg gtatgtgggc tgcggcgcaa cacgggctgc ggcgcggaat
     8821 atgaatcggt cggtcattat cgcatgtttg cctttcgggg gctaccatcc gcttcagacc
     8881 gaatgccgtc tgaaacattg tccctccttt gctataatgg cgcccttact tttcccgcca
     8941 gccgcttgaa ccgccatgca caccagcctg accgtcaaaa ataccgttat cggaagcggg
     9001 cgcaccaaaa tcgccgtgcc gcttgtcgcc cgagatgccg ccgatttatc ctccgtgctg
     9061 tcccaaatca aaaacctgcc cttcgatatc gtcgagttcc gcgccgactt tttggaatgc
     9121 gcgggcagca tcggcgaagt attgcgccac acgcaggccg tccgcgacgc gctgcccgac
     9181 aaaccgctgc tgtttacgtt cagacggcat tgcgaaggcg gctcgttccc gtgttcggac
     9241 gattattatt ttgaactgct cgacgcgctg atcgaaagcc gcctgcccga cattatcgat
     9301 atcgagctgt tttccggcga aaccgccgtc cgccgcgccg tggcaaatgc tcaaaaaaac
     9361 ggcatcgccg ccctgctctg caatcatgag tttcaccgca cgccgccgca agaagaaatc
     9421 gtatgccgtc tgaaacagat ggaggactgc ggcgcggaca tctgcaaaat tgcggtgatg
     9481 ccgcaaagct cggaagatgt gctgactttg ctttccgcca cgctcgaagc gaaacggctt
     9541 gtcgccaaac cggttattac gatgtcgatg gggcagacgg gtgcggtcag ccggcttgcc
     9601 ggacaggtgt tcggctcaag catcacgttc ggttcgggaa cgcaaaactc cgcgccgggg
     9661 caaatcggcg tatccgccct ccgtgcggca ctcgactgcc tcgaaagcgg cgcagactga
     9721 tttcagacgg catcaaaaca tgatgaaact caatgcccaa cagctcgaag ccgtccgcta
     9781 cctcggcggc cccctgttcg tccttgccgg cgcaggcagc ggcaaaaccg gcgtgattac
     9841 gcaaaaaatc aagcatttga ttgtcaatgt cggctatctg ccgcataccg tcgccgcgat
     9901 tacctttacc aacaaagccg ctgcggaaat gcaggagcgc gtcgccaaaa tgctgcccaa
     9961 accgcaaacg cgcgggctga cgatttgcac gttccattct ttgggcatga agattctgcg
    10021 cgaagaggcg aaccatatcg gttacaaaaa aaacttctcc attctcgact ctaccgacag
    10081 cgccaaaatc atcggcgaac tcttaggcgg cacgggaaaa gaagccgtat tcaaggcgca
    10141 gcaccagatt tccctttgga aaaacgattt aaaaacgcct gaagatgtcg ttcagacggc
    10201 ctctaatgtg cgggaacaac aaaccgcgcg cgtgtatgca agttatcagg aaaccctgca
    10261 aagctatcag gcagtagatt ttgacgactt aatccgcctg cctgccgtgc tgttgcagca
    10321 aaacagtgaa gtgcgcaaca aatggcagcg gcggctgcgt tatctgttgg ttgacgaatg
    10381 ccaagatacg aatacctgcc aatttgcgct gatgaaactc ttgacaggcg cggaagggat
    10441 gtttaccgcc gtcggcgacg acgaccagtc catctacgca tggcgcggcg cgaacatgga
    10501 aaacctgcgc aaaatgcagg aaaactatcc gcagatgaag gtcatcaaac tggagcaaaa
    10561 ctaccgctcc accgcgcgga ttctcaaaat tgccaacaaa gtcatcgaaa acaaccccaa
    10621 gctgtttacc aaaaaacttt ggtcgcaatt gggcgaaggc gagccggtta aagtcgttgc
    10681 ctgccaaaac gagcagcacg aagccgattg ggtcgtcagc caaatcgtca aacaaaaact
    10741 catcggcggc gacaaaaccc gatacgccga ttttgccgtg ttataccgcg gcaagcatca
    10801 ggcacggatt ttcgaggaag cattgcgcgg cgcgcgcatc ccctaccgtc tctccggcgg
    10861 acaaagcttt ttcgacaaag ccgaaatcaa agacgtgttg tcttatgtgc ggctgcttgc
    10921 caaccccaac gacgatcccg cctttctgcg cgccgttacc acgccaaaac gcggcatcgg
    10981 cgatgtaacg ctgggcaaac tcaacgccta cgcgcacgaa cacgaatgca gcctgtatga
    11041 agccgcacaa aacgaagaag cccttgccac actgaacaat accaaccgcc aacacctgca
    11101 agcctttatg gatatgttcg gcaactaccg cgccaaagcc gaaatcgacg aagcgggcga
    11161 gttcatcaac agcctgctcg aagaaatcga ctatgaaaac catttgatgc aaaacgaaga
    11221 aggcaaagcc ggcgaaatca aatggcgcaa cgtcggcgag ttggtatcgt ggttcgcacg
    11281 aaaaggcgaa cgggacggca aaaacgtcat cgaactcgcc caaaccgtcg ccttgatgac
    11341 gcttttggaa ggaaaagacg aagaagaaac cgatgccgtc tcgctatcca cgctgcacgc
    11401 cgccaaaggt ttggagtatc cgtatgtttt ccttgtcggt tgcgaagaag gtgttttgcc
    11461 gcacaacgac agcatcgaag aaggcaacgt cgaagaagaa cgccgcctga tgtacgtcgg
    11521 catcacccgt gccaaacgcc aactcacgct gacccactgt gtcaaacgca aaaaacaagg
    11581 catatggcaa ttccccgaac ccagccgatt catagacgaa atgccgcagg aagatttgaa
    11641 aatcctgggg cgcaaaggcg gcgaaccgat tgtcagcaaa gaagaaggca gacgtaacct
    11701 tgccgatata atcggaagga tcgacaacct aaaaaaaagc ggcccggcgg attaaaccgg
    11761 agccgcaatg ccgtctgaaa gacgttcaga cggcatattt tttgaacggc gcgcgtcaag
    11821 cggtttacgc ccacaaatcc tgctgctgat ttttcggtac aagcctgccg acaccgatac
    11881 cgatgaggcg gaacgcgtct tccgtctgcg gcgggacgcg cgccatcaac atttgcgcag
    11941 cctgcagcag agctgcgcag tcgggcaata cggaggaata agtcagcgtg cgcgtgatga
    12001 tgcggaaatc gtaggtcttc agcttgagcg ttacgctttg ggcttcgacg tttttgcgcg
    12061 tgatttgccg ccacaggtct tcggcaagat ggggcaggtg tccggcagcc tgcccgagcg
    12121 gcaggtcttc gggcagggtg atttctgtgg aaatttggag gcgttcgcgt tcggctttga
    12181 cggggtgttc gtccgtaccg cgcgccaaat catagaggcg gtagccgtag cgtccgaaat
    12241 gatttaagag ctcgccgcgc tcgaaacggc gcaaatcgcc cgccgtccgc atacccagcg
    12301 actgcatttt tttcagcgtt accttgcccg ctccggggat tttgcccaaa ggcagggttt
    12361 ccaaaaatgc cataactttg tgcggcggca acacaaactg cccgttcggc ttgcgccagt
    12421 cggaagcaat tttcgccaga aatttgttcg gcgcgatgcc tgcggatgcg gtcaaacccg
    12481 tttccgcaaa aatggcggca cggatttctt tggcaacttc gccggcgtaa gggatatttt
    12541 tgaaattacg ggtaacgtca agataggctt cgtccggcga caggggttcg attaaatcgg
    12601 tataacgtct gaatacggcg tgaatctgcg cagaaacctg acggtacaaa tcgaaatgcg
    12661 gcggcacata caccgcttgc ggacacagcc ttttcgccgt tgccaccgac atcgcggaat
    12721 gcagcccgaa ctgccgtgca tcatacgatg cggcacaaat caccgaacgc gcgccctccc
    12781 acgcgacgac caccggccgc cctttcaaat gcggctgttc gcgcagttct accgatgcgt
    12841 agaacgcgtc catatcgatg tggatgattt tgcgtaaaga catcggctct gccgaggata
    12901 aaagggatat tttactgcgg gcatcggaca aaatccaaat atactaacag gttaaataca
    12961 aaagagttgg ctggattaat tttgaaactc gataaaaata atggttttta tcaagca
//
LOCUS       DAXGCP010000066        12813 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.066, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000066 DAXGCP010000000
VERSION     DAXGCP010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12813
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.066"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..714)
                     /locus_tag="ACFJCW_001581"
     CDS             complement(<1..714)
                     /locus_tag="ACFJCW_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HFC4151684.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGVNPFSDIKSTFLIFKALKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRITLPMLESLIVLNPDD
                     KDELLHQYGIKIKNIHILGGIGLDLRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKGKYPDTVFTAL"
     gene            complement(941..1063)
                     /locus_tag="ACFJCW_001582"
     CDS             complement(941..1063)
                     /locus_tag="ACFJCW_001582"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151685.1"
                     /translation="MPSETFRRHFPNTPPVAGLHGTQISLIKPQITAAIKPPFK"
     gene            complement(1068..2297)
                     /locus_tag="ACFJCW_001583"
                     /pseudo
     CDS             complement(1068..2297)
                     /locus_tag="ACFJCW_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259190.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(2691..3938)
                     /gene="fabF"
                     /locus_tag="ACFJCW_001584"
     CDS             complement(2691..3938)
                     /gene="fabF"
                     /locus_tag="ACFJCW_001584"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HFC4151686.1"
                     /translation="MSQRRVVITGLGQVSPVGNTAAEAWDNLLAGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPSIEATGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSARLIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHACKTVISST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(4095..4331)
                     /gene="acpP"
                     /locus_tag="ACFJCW_001585"
     CDS             complement(4095..4331)
                     /gene="acpP"
                     /locus_tag="ACFJCW_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HFC4151687.1"
                     /translation="MSNIEQQVKKIIAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            4563..5570
                     /locus_tag="ACFJCW_001586"
     CDS             4563..5570
                     /locus_tag="ACFJCW_001586"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HFC4151688.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALNTVYKLGLIPVTDNRTKPI
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFLEIGTVTRNPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDAMIRNIEKSKYQGVLGINIGKNAVTPIQNVADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGGELGALLEALKNKQAQLAAAHGKYIPLAVKIAPD
                     LDEAQIEDIARVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGFPVREKSNRVL
                     KKLAEHIDGALPIIGVGGIMEGGDAAEKIRLGTTAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            5794..6267
                     /locus_tag="ACFJCW_001587"
     CDS             5794..6267
                     /locus_tag="ACFJCW_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HFC4151689.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYENKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLTNKSNIFELKPVLEDLASETRGYSPKNWLYILLNDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSNHSYEENIARLYSHWEHYLNNGGGQG"
     gene            6281..6616
                     /locus_tag="ACFJCW_001588"
     CDS             6281..6616
                     /locus_tag="ACFJCW_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151690.1"
                     /translation="MPSEALSGVQTAFCFPTVYKLSLFLDRNNDLIYLKRLEDMIMGF
                     WGSVGKAAKAVGEGLIEAGNQHKALKMEYAEKSSEELHEIVKSDGFFKNSTREKGAAY
                     AVLKERGEV"
     gene            6810..9500
                     /gene="glnE"
                     /locus_tag="ACFJCW_001589"
     CDS             6810..9500
                     /gene="glnE"
                     /locus_tag="ACFJCW_001589"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HFC4151691.1"
                     /translation="MSDHRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKALTDEDFQ
                     AFADWDKIRAEESEEELARQLRELRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFAYAYYRDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFVYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNGITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRNLHRQIRS
                     EVSKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTQETLKKIAEMGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPISPEQRQLLAESMGFDSYAAFSDGL
                     NVHRNKVNQLFNEILSEPEEQAQSNSEWQWAWQEKPDEEERLGRLKEHGFDAEAVTAR
                     LEQICHGHKYRRLSAHAQPRFDTIVPLFVQAAAEQNNPTDTLMRLLDFLENISLRSAY
                     LAFLNEHPQTLAQLAQIMSQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DGIEACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTVIAAAL
                     SCAWADMPKKHRDTPQFAVIGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNRLSAATGAGSLYETDLRLRPNGDAGFLAHSIAAFGKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEMLTAERDQTALAGEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARQYPQLLDNYGNIALLNIAADCGLIDKTLAGQSRTAYRLYRRQ
                     QHNTKLRDAAKTEVSDELLSHYGNVRKLWREVFGEEAATA"
     gene            9924..12131
                     /gene="uvrD"
                     /locus_tag="ACFJCW_001590"
     CDS             9924..12131
                     /gene="uvrD"
                     /locus_tag="ACFJCW_001590"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HFC4151692.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQSGQASVHSIMAVTFTNKAAKEMQTRLGAMIPINVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDSGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLGAPDPHTSRMIGCYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRRHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKVVAFVRLIEALRNQVGQMHLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIASRFVEEIPPEVLHYLSVKKPAFDSYGNTRQTTVQRDKIIDDFKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
BASE COUNT         3048 a         3561 c         3476 g         2728 t
ORIGIN      
        1 caaagcggta aaaaccgtat cggggtattt gcccttaacc tgttccgccg cccgaataaa
       61 atcatcaatc cctttttctt tcagaaatct gccgataaag agaaatttta cgggttcttt
      121 ttcatcggga atatccgcct cggaataagg atattgccgc aaatccagac cgattccgcc
      181 caaaatatgg atgtttttta ttttgatgcc gtattgatgc agcaactcgt ctttgtcgtc
      241 ggggtttaat acaatcaggc tttccaacat cggcagggta atgcggtaca aggcgattaa
      301 aatccccttt atgatttttg tttttaacgg tatgccttcc ggctgcgggg taaatgcgaa
      361 tcccaaacct tccagcatcc cgacgattct gggcacgcct gccaattttg cggcaaaagt
      421 gccgaaaatc acgggttttg cgaaataagg gaaaaccaaa tccggcgata tttttttgag
      481 tgctttaaat atgaggaagg tggattttat atcggaaaac gggtttaccc cgctgcggtt
      541 tgaccggtag gtaacgggtg taacccccat ttccctgata atgtccaact cattgtcgga
      601 aaactccgat acaaatgcat acacctgatg gtttttgccg attaattttt taatgacggg
      661 ggcgcggaaa ccgtaaatgc tggatgcgac tgttgtgata aaaacgattt tcataaggcg
      721 gacaccttga atataggatt ggaaatgcgg tctgcattga tgaaatgccg gatacggggc
      781 gcggcgggca aacctttgcc aagcgcgccg catccgacgc ttcgcccgcc cgggcagggg
      841 cggcttcaga cggcatttta tcctgaaatc cgctgcataa cgcccagcga tatacagtat
      901 cgcgttttgt gatgatttta cacccgaagg gaaaacgggc ttatttgaat ggcggtttaa
      961 tcgcggcggt tatttgcggt ttgataaggc tgatttgcgt gccgtgcagt ccggcaacgg
     1021 gcggggtgtt tggaaaatgc cgtctgaagg tttcagacgg cattctgtca tgcggcggtt
     1081 cggggttcgc ggacgggcag gacaagcagg gctgccgtgc cggcgagtac ggcatcggcg
     1141 taccacatcc agccgtagtc accgaattgt gtaatcacga tgccgccgat gtacgagccg
     1201 aggaatccgc cgatttggtg ggtgagcatc accagtccga acagggtggc gaggtagcgc
     1261 gtgccgaaga gtttgccggt aacggcggcg gtcggggcga cggtggcgag ccatgtgaat
     1321 ccgagtgcgg cggcgaaaat gtaaaagttg aggtcggttt tgggtgagaa gatgtaaatc
     1381 agcaccatgg cgacgcgtga ggcgtagagt ccgaacagga tgtgttttcc tttgaagcgt
     1441 ccggtgcatc agcctgagaa cacgcaaccg gcgatgtttg ccagtccgat gatggcgatg
     1501 gatgtcgagg cgacggtggc gggcagtccg cacagggcga cttccgtggg taggtgggtt
     1561 acgagaaagg cgatgtggaa gccgtaggcg aaaaagctca ggtgcagcag gatgtagctt
     1621 ggggttttga aggcggtttt gactgcttct ccgaggcttt gtccgtgtgt ggcttgggtg
     1681 tgttgggtgt gggcggcgtt gttgccgccg ttgttgccgc cggcaagcca ccatgagacg
     1741 ggcagaatca gcagggcgat tgcgccccaa acgtaaaatg tacccgtcca gccgacttcg
     1801 ggcaggacga agagtccttg aaccagcggt gcgaacagga attgtcctgc cgaaccgcct
     1861 gcgttgacca gtccggatgc caagccgcgt ttgtgtgtgg ggacttgggc ggcgacttgt
     1921 cccataatga tggaaaaccc gccggaaccg gtgccgaatg cgagcagcag cccgacggca
     1981 atcatcagcc cccaataagt cgggatgttg gaggcaatca ggcaggcgca gacgagcagg
     2041 agggcaccgc cgcttaatac cctgaacgcg ccgaaacggt cggcaagcgc gccggacaat
     2101 ggttgcaata cgccccacat cagttggaaa acggtgatga tgaggctgaa ctgggcaatg
     2161 ctcaattcgg tggtgttgac gacgggttgg acgaacagtc cgagcgtcat cctcatgccg
     2221 atggtaatca gcaggatgaa tgcggcggcg gcaatgaccg cccagagttt gggtgttttc
     2281 gatgcggtgt gcgtcataat atgtattttg agtcggttaa gtttgcgaat tttaacaaac
     2341 cggatgattc gggctaaata attcctgatt ctttggatat agccaacggt atgtctgccg
     2401 atgccgtctg aaagggcttg atgggcgttt gcggttcggg ttaatatttg tgccgtattt
     2461 gttaattcca gttagtatag tggattaact ttaaaccggt acggcgttgc cccgccttag
     2521 ctcaaaagag aacgattccc taaggtgctg aagcaccggg cgaaccggtt ccgtaccatt
     2581 tgtaccgtct gcggcccgcc gccttgtcct gatttttgtt aatccactat aaaaatgccg
     2641 tctgaaacgg tttcagacgg catttcgatg tcggcggcgg ctttgcggaa tcagcctttg
     2701 aagcgtttga agaccagcgt accgttggtg ccgccgaagc cgaaggagtt ggaaatggca
     2761 acgtcgattt ccgcgtcgcg cgcttcgttg gcgcagtagt ccaaatcgca gccggcttca
     2821 acgtcttgtt caaaaatgtt gatggtcggc gggattttgc cgtcgtgtat cgccaaaatg
     2881 ctgtacacgg cctccacgcc gcccgccgcg ccgagcaggt ggccggtcat ggatttggtc
     2941 gagctgatga cggttttgca ggcgtgttcg ccgaacgcgc gtttgagggc tttggtttcg
     3001 ttggcatcgc ccaagggggt ggacgtgccg tgcgcgttga cgtaatccac gtcttcggga
     3061 ttgatgccgg catctttcag cgcgcgggta acggcaaggg cggggccttc ttcgttcggc
     3121 gcggtgatat ggtaagcatc ggaactcatg ccgaagccga cgatttcggc gtagattttc
     3181 gcgccgcgtt ttttggcgtg ttctaattct tccaacacca atatgcccgc gccttcgccg
     3241 atgacgaagc cgtcgcggcc tttgtcccac ggacgggaag cggtggcggg gtcgtcgttg
     3301 cgggtggaga gggctttcat cgcagcaaaa ccgcccacgc ccaaggtgct gattgcgcct
     3361 tccgcgccgc cggcaaccat tatgtccgcg tcgccgtatt tgatcagtcg ggcggaatcg
     3421 ccgatggcgt gcgcgccggt ggtacaggcg gaaaccatgc cgtagctcgg gccgcggtag
     3481 cctttgagga tggtaacgtg tccggaaatc aggttgatca gcgaaccggg gataaagaaa
     3541 gggttgattt tgcgcgcgcc gccttcgatt acggctttgc cggtggcctc gatgctgggc
     3601 agtccgccga tgccggaacc gatgttcacg ccgatgcggt ctttgtcgag gttttccaca
     3661 tcgtccaaac ccgaatcggc aatcgcctgc aatgcggcgg cgatgccgta gtggatgaac
     3721 acgtccatcc ggcgcgcttc tttcgcgctg atgtattgtc cgatgtcgaa accgcgcact
     3781 tcgccggcga cacggctgtt gatgtcggat gcgtcaaagc gggtaatcgc gccgatgccg
     3841 cttttgccgg cgagcaggtt gtcccaagcc tctgcggcag tgttgccgac aggggaaacc
     3901 tgacctaagc ctgtaatgac tactcttctc tgactcatga taacctcgct gttggttgtc
     3961 ggaatggggg gcatatgcgg ctgtcgtgca gatgccgtct gtaatttgcg gcaggggttc
     4021 aaacagtttg ccatataagg gaaaagcctc tattgcgcgg tgcagcagag gctgttgtgt
     4081 cgggcgacga ccggttagcc gttgtgggca ttgatgtagt cgatagccag ttggacggtg
     4141 gtgatttttt cggcatcttc gtcggggatt tcgcagccga aggcttcttc caaagccata
     4201 accagctcca cggtatccaa agaatccgcg cccaagtcgt cttggaagga agattcgttt
     4261 ttcacgtcgg cttcgtttac gcccagttgt tcagcaataa ttttcttaac ttgttgttcg
     4321 atgtttgaca tatcagtcgt tcctttatgc cttgcggcag gttgtttaag ggaaataaat
     4381 cggtggtatt gtaccgattt ttaatagagt tttctatcta atgcctatta tatcaatatt
     4441 tgcggatttg tacatttttg ggtgcggcgg gttttgtcgt tcaagtttga cctgtgtgcc
     4501 gcatgtttgg cgggatttcg gttaaaatgg cggcatttcc atctgaagca gaaagccctg
     4561 tcatgtatcc acttgcccgc cgcatcctgt ttgcactcga tgccgaaaaa gcccaccact
     4621 tcacgctcga cgcgctcaac acggtttata aattgggcct gattcccgta accgacaacc
     4681 gtaccaaacc tataaaactg atgggtatgg atttgcccaa ccctgtcggg cttgccgcag
     4741 gtctcgacaa aaacggtgaa tacatcgacg ctttgggcgc gctcggtttc ggcttcctcg
     4801 aaatcggcac ggttacgcgc aacccgcagc ccggcaaccc gcagccgcgc ctcttccgcg
     4861 ttcccgaaca ccaaggcatc atcaaccgaa tgggttttaa caaccacggc atcgacgcga
     4921 tgatacgcaa tattgaaaaa agcaaatatc aaggcgtatt gggcatcaac atcggcaaaa
     4981 acgcggttac gcccatccaa aacgtcgccg atgattattt aatctgcctc gaaaaagcct
     5041 acgcgcacgc aagctacatt accgtcaaca tttcctcgcc caacaccaaa aacctccgcg
     5101 cgctgcaagg cggcggcgaa ttgggcgcat tgctcgaagc cctgaaaaac aaacaggcgc
     5161 agcttgccgc cgcccacggc aaatacatcc cgctagccgt caaaatcgcc cccgatttgg
     5221 atgaagcaca aatcgaagac atcgcccgcg tcgtcaaatc cgtcgaaatg gacggcatca
     5281 tcgctaccaa caccaccatc gacaaatcaa gcctcggcag ccatccgctc gcaggcgagc
     5341 agggcggttt gagcggtttt cccgtgcgcg aaaaaagcaa ccgggtgctg aaaaaactgg
     5401 cggaacacat agacggcgca ttgccgatta tcggcgtagg cggcattatg gaaggcgggg
     5461 acgcggcaga gaaaatccgc ttgggcacga ccgccgtcca agtgtacagc ggattgatat
     5521 acaaaggccc ggcgttggtc aaagaatgtt tgaaggcatt ggcgcgatga cgcgccccac
     5581 ccaaaatgcc gtctgaacgc acgttttgcc gttcagacgg cattttcata gattggtatc
     5641 cgactgttga agaggcaatc agccgtcatt tggaagactt ttcgtaacag gcgtcaatcg
     5701 aaaggggcgg aatgacgggg caggcaaacc gatgcgtgaa cacggggcag gcaaaccgat
     5761 gcgtgaacac ggggcaggca accggagtaa aaaatgaacc ttgatttaac cgctcaaaaa
     5821 gtccgccttt cttggaagga tattctgtgg gggtatgaga ataaatactt gggttgggct
     5881 gatgtggcag cttatgcccg aaaaatgacg ctttcagatc atgatgaacg cgtgttcaag
     5941 ctatctttaa ccaacaaatc caatattttt gaattaaagc ctgttctaga agatttggct
     6001 tcggaaacga ggggttattc ccctaaaaat tggctgtaca tcctcctaaa tgacgtattc
     6061 catagaaaag aagaatttga ggatcctctg ggggaagttg aaaaaattta tgcggatttc
     6121 gattatccgg aagaaataga atcatttgtc aggtatatgc cgcccaaaga cggctatatc
     6181 ccttctaatc atagttatga agaaaatatt gcccggttat attctcactg ggaacactat
     6241 ttgaacaacg gcggcgggca gggttaaaac cggcaatcct atgccgtctg aagcgttatc
     6301 cggcgttcag acggcatttt gttttccgac agtttataaa ctgtcgttgt ttcttgacag
     6361 aaacaacgac cttatttatt tgaaacgatt ggaggacatg attatgggtt tttggggtag
     6421 tgtgggaaaa gcagcaaaag cagtaggcga gggattgatt gaagccggca atcagcataa
     6481 ggcgttgaaa atggaatatg cggagaaatc aagtgaggag ctgcatgaaa tcgtaaagag
     6541 tgatggtttt tttaaaaatt ccacacggga gaaaggtgcg gcttatgctg ttttaaaaga
     6601 gcgtggcgag gtttgaacgg gaaacggcgg catttgccgc tgttttttta tcggcaggca
     6661 tccgtccgaa tatcggggca aggtttcaga cggcatcgaa ggttgctatg atatagtggc
     6721 ttgactttaa accggtacgg ctccgccttg ccccgatttg aagttcatcc gctatcacat
     6781 tcccgccatc ctttcaaacg gaatccgaaa tgtccgacca ccgcctcgac accgcccgcc
     6841 gccattccct gttcctcgcc cgccagctcg acaacggcaa actcaagccc gaaattttcc
     6901 tgcccatgtt ggacaaggcg ttgacggatg aggatttcca agcctttgcc gactgggaca
     6961 aaatccgcgc ggaagaaagc gaggaagaat tggcgcggca gttgcgcgag ttgcgccgtt
     7021 atgtggtgtc gcagattatc gtgcgcgata taaaccgtat cagcgatttg aacgaagtta
     7081 cccgcacgat tacgctgttt gccgattttg ccgtcaatac cgcgctggat ttcgcctacg
     7141 cctattatcg ggacatgtac ggcacgccga tcgggcgtta taccaaatcg ccgcagcatt
     7201 tgagcgtggt ggcgatgggc aaggcgggcg gctatgagct gaacgtgtct tccgacatcg
     7261 atttgatttt cgtctatccc gaatcgggcg acaccgacgg caggcgcgaa cgggggaatc
     7321 aggagttttt taccaaagtc gggcagaaac tgattgcatt gttgaacggc attactgccg
     7381 acgggcaggt gttccgcgtc gatatgcggc tgcggccgga cggtgattcg ggcgcgctgg
     7441 tgttgagcga aaccgcgctg gagcaatatc tgattacgca ggggcgcgaa tgggaacgct
     7501 atgcgtggtg caaaggccgc gtagtcacgc cgtatccgaa cgacatcaaa tcgctggtgc
     7561 gccccttcgt gttccgcaaa tatctggatt acggcgcgta tgaggcgatg cgcaacctgc
     7621 accgccaaat ccgcagcgaa gtcagcaaaa aaggcatggc ggacaacatc aaactcggcg
     7681 cgggcggcat ccgcgaggtt gaatttatcg cccagatttt ccagatgata cgcggcggcc
     7741 aaatgcgcgc gctgcaactg aaaggcacgc aggaaacgct gaagaaaatt gccgagatgg
     7801 gcattatgcc gtctgaaaac gtcgaaaccc tgcttgccgc ctaccgcttc ctgcgcgatg
     7861 tcgaacaccg cctgcaatac tgggacgacc ggcaaaccca aaccctgccg atctcgcccg
     7921 aacagcggca actgctcgcc gaaagcatgg gtttcgacag ttatgccgct ttttcagacg
     7981 gcctcaatgt tcatcggaac aaagtcaatc agttgttcaa cgaaattttg agcgaacctg
     8041 aagaacaagc gcaaagcaat agcgaatggc aatgggcatg gcaggaaaaa cccgacgaag
     8101 aagaacggct aggccgtctg aaagaacacg ggttcgatgc cgaagccgtc accgcaaggc
     8161 tcgaacaaat ctgccacgga cataaatacc gccgcctttc cgcacacgcc cagccgcgct
     8221 ttgacaccat tgtgccgctg ttcgtacagg cggcggcaga gcaaaacaac ccgacagata
     8281 cgctgatgcg gctgttggat tttctcgaaa acatcagcct ccgctccgcc tatctcgcct
     8341 tcctcaacga acatccgcaa accttggcac aactggcgca gattatgagc caaagctcgt
     8401 gggtggcggc gtatctgaac aaatatccga ttttgttgga cgaactcatc agcgcgcagc
     8461 ttttggatac cgcgtttgat tggcaggcac tcgccgccgc cctttcagac ggcatcgaag
     8521 cctgcggcgg cgataccgaa gcgcaaatgg acacgctgcg ccatttccaa cacgcccaag
     8581 tcttccgcct cgccgtccaa gacctcgccg gattgtggac ggtagaatcc ctctctgacc
     8641 aactctccgc cctcgccgac accgtcattg ccgccgccct ttcgtgcgcg tgggcggata
     8701 tgcccaaaaa acaccgcgac accccgcaat tcgccgtcat cggctacggc aagctcggcg
     8761 gcaaagaact cggctacgcc tccgacctcg acttagtcta tctttacgac gatccccatc
     8821 ccgaagcagg cgacgtgtac agccgcctcg cccgccgcct gaccaaccgg ctttccgccg
     8881 ccaccggcgc gggcagcctc tacgaaaccg acctgcgcct gcgccctaat ggcgacgccg
     8941 gtttcctcgc gcacagcatc gccgcctttg gaaaatacca gcgtgaaaac gcatggacat
     9001 gggaacacca gtccctcacc cgcgcccgct tcatctgcgg cacacccgaa attcagacgg
     9061 cattcgaccg catccgcacc gaaatgctga ctgccgaacg cgaccaaacc gccttggcag
     9121 gcgaaatcat cgaaatgcgc gaaaaaatgt tccccaccca tccgcctgcc gacagcaacg
     9181 tcaaatacgc gcgcggcggc gtggtcgacg tcgaatttat cgtccaatat ctgatacttg
     9241 cccatgcccg ccagtatccg caactcttgg acaactacgg caacatcgcc ctattgaaca
     9301 tcgccgccga ctgcggtttg attgacaaaa ccctcgccgg acaaagccgc accgcctacc
     9361 gcctctaccg ccggcagcag cacaacacca aactgcgcga cgcggcaaaa accgaagtaa
     9421 gcgacgaatt gctgtcccat tacggcaatg tcaggaaatt gtggcgggaa gtgttcgggg
     9481 aggaagcggc aaccgcctga acaaaaaatg ccgtctgaag cctgacgatt cgggtttcag
     9541 acggcatttg tttttggctg tgtctgaaca atcggtacga tttcggttgt ttgcaaattg
     9601 aaaggcggtt attcctatgt tcaggcggca aaccgaaata ttttccccaa ccgatagggc
     9661 gatatcaaag cctattcgaa taccgccttt acggggaagg ggctttccga gcttgaccat
     9721 ggtcaggctc ggcaaatcag cccgcatcct gtcgatgcgt ccgtccaaat cggtttggaa
     9781 cgccgcaatg tgatatccgc ctatcaaggt tttgcgtgcg tgtgtcggcg agggctttgc
     9841 caaaaccgaa atcaaaatca agttgtcagg catccttccg tttctattaa aatagcgcat
     9901 tccatttttc agacggcatc cttatgtttc ccgaccaatc cgcccccaat ctgctgcaag
     9961 gcttgaaccc cgaacaactc tccgccgtaa cctggccgcc gcaatccgcc ctcgttttgg
    10021 caggcgcagg cagcggcaaa acgcgcgtgc tgaccacgcg tatcgcatgg cttttgcaaa
    10081 gcggacaagc cagcgtacac agcattatgg cggtaacgtt taccaacaag gccgccaaag
    10141 agatgcaaac ccgactcggc gcaatgattc ccatcaacgt ccgcgctatg tggctcggca
    10201 cgttccacgg tttgtgccac cgctttttgc gcctgcacca ccgcgacgca ggcctgccgt
    10261 cttcctttca aatcctcgac agcggcgacc agctttccct catcaaacgc ctgctcaaaa
    10321 gcctcaacat cgccgaagaa atcatcgcgc cgcgttcgct gcaaggcttt atcaacgcgc
    10381 aaaaagaatc cggtttgcgc gcttccgtct tgggcgcgcc cgatccgcac acaagccgca
    10441 tgattgggtg ctacgccgaa tacgacaaaa tctgccaacg cgaaggcgtg gtcgatttcg
    10501 ccgaactcat gctccgcagc tacgaaatgc tgcaaagtaa cgaaatcctg cgccggcact
    10561 accaaaaccg cttcaaccac attctggtcg acgagtttca agacaccaac aaactgcaat
    10621 acgcctggct caaactcatg gcgggcggta acgcagcggt atttgccgtc ggcgacgacg
    10681 accaaagcat ttaccgcttc cgcggcgcaa acgtcggcaa catgaccgca ctgatggaag
    10741 aattccacat cgacgcgccc gtcaaactcg aacaaaacta ccgctccgtc ggcaacatcc
    10801 tcgccgccgc caacgccgtt atcgaaaaca acgacgaacg tctcggcaaa aacctgcgca
    10861 ccgacgccga agcaggcgac aaaatccgct attactccgc ctttaccgac ctcgaagaag
    10921 cccggttcat cgtggacgaa accaaagccc tcgaacgcga aggctgggat ttggacgaaa
    10981 tcgccgtcct ctaccgcagc aacgcccaat cgcgcgtcat cgaacaaagc ctgttccgca
    11041 gcggcatccc ctacaaaatc tacggcggcc tgcgctttta cgaacgccaa gaaatcaaac
    11101 acgccctcgc ctacctgcgc ctcgccgtca atcccgacga cgacaacgcc ctcttgcgtg
    11161 tcatcaactt cccaccgcgc ggcatcggcg cgcgcaccgt cgaaaacctt cagacggcct
    11221 caaacgaaca aggcatcacc ctctggcagg cagcctgcaa cgccggcgcg aaagccgcca
    11281 aagtcgtcgc cttcgtccgc ctgattgaag ccctgcgcaa ccaagtcgga caaatgcacc
    11341 tgtccgaaat catcgtcggc atcctcaaag acagcggtct gaccgagcac taccgaaccc
    11401 aaaaaggcga caaccaagac cgcctcgaca accttgacga actcgtcaac gccgccatcg
    11461 agttcaaacc cgaagacagc aactttgaaa ccctgcccga aaacatttca gacgatcccg
    11521 ccttccccat cctcgccttc ttgagcaacg ccgccctcga atccggcgaa aaccaagcag
    11581 gggcaggcga aaaagccgtc caactgatga ccgtccacgc cgccaaaggc ttggaattca
    11641 acgccgtctt cctcaccggt atggaagagg ggcgtttccc cagcgaaatg agccttgccg
    11701 agcgcggcgg cctcgaagaa gaacgccgcc tcatgtacgt cgccatcacc cgcgcccgca
    11761 aacgcctcta catcaccatg gcacagcaac gcatgctgca cggacaaacc caattcggca
    11821 tcgcatcccg cttcgtcgaa gaaatcccgc cagaagtatt gcactacctg tccgtcaaaa
    11881 aacccgcctt cgacagctac ggcaacacgc gccaaaccac cgtacaacgg gacaaaatca
    11941 tcgatgactt caaacagccg caaacctacg caggcttccg catcggacaa aacgtccgtc
    12001 acgccaaatt cggcaccggc gtgattatcg atgccgcaga caaaggcgaa tccgcccgac
    12061 tgaccatcaa cttcggcaaa cagggcgtga aagagctgga taccaagttt gcgaaattgg
    12121 aagcgatgta aatttgaaat gcaggccgga tattcgtatc cgacaaaaaa acatttgacg
    12181 cgtttatcgt ttccgaaaaa ccgctgttgg aaatgtcgga ttcgagaatc cgacctacgg
    12241 caaaaaaccg tagcaaggac aaggcaaata gtcgtctgaa aacgggaagg gcaattttgc
    12301 cgcagccgcc gccgtcattc ccgcgaacct acattccgtc attcccacga aagtgggaat
    12361 ccggaacgca aaatctaaag aaaccgtttt atccgataag tttccgcacc gacaggtctg
    12421 gattcccgct tatgcgggaa tgacggcggc gggaatcggc ggattcggcg gagttggtgg
    12481 atttggcggg ctgaagcccg cccttgtata tcggaacttc cgtatcatag cgacaaaccg
    12541 cccggccgcc acccgcgccc gcccaaggca gacaaccgtt gcgtagctca gggagcggca
    12601 gggcaaccca tcggcacaac cggacagttg ccaactgtat atggctgccg cggcagcgac
    12661 acgttttgaa ccgcttattc gggatttcca ccaacgcctg ctgtatagcg gattaacaaa
    12721 aaccggtacg gcgttgcccc gccccggctc aaagggaacg gttccctaag gcgcccaagc
    12781 accaggcgga tcggttccgt accattcgta ctg
//
LOCUS       DAXGCP010000067        12449 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.067, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000067 DAXGCP010000000
VERSION     DAXGCP010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12449
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.067"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            5..1252
                     /locus_tag="ACFJCW_001591"
     CDS             5..1252
                     /locus_tag="ACFJCW_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC4151693.1"
                     /translation="MTAPVPTCNMSGNPINLHKLTFIMLLPSPEARQSSLNLQTLIAE
                     EIGKHGNWIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTPLFAQTLARQL
                     QELLPQTAGNIYEFGAGTGQLAADLLGSVSDSINCYYIIEISPELAARQKNLIQARAP
                     EASQKVVHLTALPEAFDGIIIGNELLDAIPVEIVRKNEGGLLEHIGVCTDNGRFAYSA
                     RPLHDPSLSTSASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQ
                     YYHPQRNQGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQ
                     SHFLLNLGITELLAQTGKTDSAAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGIDWA
                     GFRFGDICHKLQPSCRLNPLQTA"
     gene            1348..1424
                     /locus_tag="ACFJCW_001592"
     tRNA            1348..1424
                     /locus_tag="ACFJCW_001592"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1382..1384,aa:Met,seq:cat)
     gene            1432..1507
                     /locus_tag="ACFJCW_001593"
     tRNA            1432..1507
                     /locus_tag="ACFJCW_001593"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1465..1467,aa:Ala,seq:ggc)
     gene            complement(1693..2514)
                     /locus_tag="ACFJCW_001594"
     CDS             complement(1693..2514)
                     /locus_tag="ACFJCW_001594"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HFC4151694.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIGFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFDK
                     QIKEYLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTVMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(2547..3191)
                     /locus_tag="ACFJCW_001595"
     CDS             complement(2547..3191)
                     /locus_tag="ACFJCW_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HFC4151695.1"
                     /translation="MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEHVVWRPEMLGLARMAAAVKLSGL
                     KYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
                     LTEQYGIDGTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(3194..4057)
                     /gene="ftsN"
                     /locus_tag="ACFJCW_001596"
     CDS             complement(3194..4057)
                     /gene="ftsN"
                     /locus_tag="ACFJCW_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HFC4151696.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILLYLNQGGQNAFKIPA
                     PSKQPAETEILKLKNQPKEDIQPEPADQNALSEPDVAKEAEQSDAEKAADKQPVADKA
                     DEVEEKAGEPEREEPDGQAVRKKALTEEREQTVREKAQKKDAETVKKQAVKPSKETEK
                     KASKEEKKAAKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTFGKAEATHYLQMG
                     AYADRRSAEGQRAKLAILGISSEVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHG
                     VASLIRAIEGK"
     gene            complement(4163..5659)
                     /locus_tag="ACFJCW_001597"
     CDS             complement(4163..5659)
                     /locus_tag="ACFJCW_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HFC4151697.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLAQTECSVPQMPSEHGGQPDLCDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLAEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHGAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSASVLERVIAARGKQYARQGKVNAALSVSELDSQARIQKEAQEAL
                     GSLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(5673..5993)
                     /locus_tag="ACFJCW_001598"
     CDS             complement(5673..5993)
                     /locus_tag="ACFJCW_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HFC4151698.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            6481..8007
                     /gene="putP"
                     /locus_tag="ACFJCW_001599"
     CDS             6481..8007
                     /gene="putP"
                     /locus_tag="ACFJCW_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HFC4151699.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGASTVVVWAEWV
                     KKPARAAGESGLLTMYEIVPGFIVCLIVAVLVSLFNKEPSREIQERFEKADADYRAAR
                     "
     gene            8259..11864
                     /gene="putA"
                     /locus_tag="ACFJCW_001600"
     CDS             8259..11864
                     /gene="putA"
                     /locus_tag="ACFJCW_001600"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HFC4151700.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDKQMSSALGRLIGKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHGDVVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLILGAGD
                     TGAALTNDASIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKAAADVDSEKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDSVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRIPEWVAPTLSQIGQADEAALKRL
                     EALIHKLPFNAEEKKAAAAALGHARIRTLRRAESVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTGLAASGVQAVVEPDSPLASYTADLDGLLQISGKPENTGVNHVAALSP
                     LDSSRKQELANRDGALIRILPSGQGLDILQVFEEISCSINTTAAGGNAGLMAVAD"
     gene            12119..>12449
                     /locus_tag="ACFJCW_001601"
     CDS             12119..>12449
                     /locus_tag="ACFJCW_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4151701.1"
                     /translation="MSESKNESSLKKLLFSSAAQAASEGNGRGPYVQADLAYAYEHIT
                     RDYPDAAGANKGKISTVSDYFRNIRTHSIHPRVSVGYDFGGWRIAADYARYRKWNNNK
                     YSVSIKEL"
BASE COUNT         2930 a         3611 c         3063 g         2845 t
ORIGIN      
        1 agccatgaca gcacccgtac caacgtgtaa tatgtcggga aatccaataa atttacacaa
       61 gctaacattt atcatgctcc tcccctcccc cgaagcacgg caatcctcgc tcaatctgca
      121 aaccctcatt gccgaagaaa tcggcaaaca cggcaattgg attccatttt cacgttttat
      181 ggaattggtt ttatacgctc cgcaatacgg ctactacacc ggcggcagcc ataaaatcgg
      241 caataccggg gattttatta ccgcaccgac cctcacccct ctgtttgcac agacactggc
      301 acgccaactt caagaactcc tgccccaaac ggcgggcaat atctatgaat tcggcgcggg
      361 aaccggacag cttgccgccg atttgttggg cagcgtttca gacagcatca actgttacta
      421 tattattgaa atatcgccgg agctggcagc acgtcagaaa aacctgattc aagcccgtgc
      481 accggaagca tctcaaaaag ttgtccactt gaccgcactt cccgaagcgt ttgacggcat
      541 catcatcggc aacgaattac tcgatgccat acctgtcgaa atcgtccgta aaaatgaagg
      601 aggattactc gagcacatcg gcgtttgcac ggataacggc cgtttcgcct attctgcaag
      661 acccttgcac gacccgtcgc tttccacctc ggcttccctc tattttcctc aaacagatta
      721 tccctatacc agcgaactgc acccgcaaca atatgccttt atccgcaccc ttgcctcaag
      781 gcttgaacgc gggggtatga tattcatcga ctacggtttt gatgcggcgc agtattacca
      841 cccgcaacgc aatcaaggca cattgatcgg acactaccga caccacgtta tccacaatcc
      901 tttcgacttc atcgggttgg cagatctgac cgcccacgtc aattttaccg acattgccca
      961 agccggtacg gatgcaggac tggatttgac aggctatctg ccccagtccc attttctgct
     1021 gaatctgggc ataaccgaac tgttggcaca gacgggtaaa acagattcgg cagcctatat
     1081 ccgtgaagcc gccgctgttc aaaaactgat tgaccagcat gaaatgggcg aactgtttaa
     1141 agtcatcgca ttcggaaaaa atatcggcat cgactgggca ggattccgct tcggcgacat
     1201 ctgccacaaa ctccaaccct cgtgccgtct gaatccgctt cagacggcat aaacttttta
     1261 acatttaaaa acaagaaact aattcaaaat taaaaaatac ggcttgtcaa aaaaacaaaa
     1321 aaacatataa tagctaattc acgaaacggc gaattagctc agtcggttag agcagaggaa
     1381 tcataatcct tgtgtccggg gttcgagtcc ctgattcgct accagatttt cgggggtata
     1441 gctcagttgg tagagcgctt gcatggcatg caagaggtca gcggttcgat cccgcttacc
     1501 tccaccagat aaaaaagcac agaccgtaaa aggtatgtgc ttttttattg cctgattgcc
     1561 ggaaaataaa gaataaacca ctgccttcaa aacaggcaat cgactttaaa cctattgccc
     1621 cgcctgtcct gattttatca gcccgccaga caaacccgac ctgaataatg tcttcaggtc
     1681 gggtttatgg tttcattccc aacttatcca gcccgacaac cacaatatta tgatgacaat
     1741 gccgaaaaca atgcggtaat aggcaaacgg gatatagttt ttcttggaaa caaacttcag
     1801 cagtgcttta accgctacca aaccggaaac aaaagcggca ataaagccta tcaaaatcaa
     1861 accgacatca tgcagggtga aaaatcggta atgtttcagg acatcataag ccgttgctgc
     1921 aaccatcatc ggaacggcca agaaaaatga aaactccgtt gccgttttcc gctcgattcc
     1981 ccaaagcatc ccgcccataa ccgtactgcc cgaacgggac gtacccggaa ccagtgcaaa
     2041 cacttgggca acaccgatca tcaacgcatc aatcggacgc aatgcatcaa catcggcaat
     2101 tttaggctct gctcggcttt ggcgtttctc cacccacaaa ataaaaaaac cgcccaaaac
     2161 cagcatgact gcaacactca aggggttaaa cagatactct ttgatttgtt tgtcgaacaa
     2221 cagccccatc acggcggcag gtataaaagc aatggcaaga ttgaggacga aacggttggc
     2281 tttccggtct tttcccacgc catgcaacac attgctgaaa cgctgccggt attcaaacac
     2341 taccgccaaa accgcaccga gctggatggc aatttcaaaa accttgtgat tgctgtgaaa
     2401 accaatcaga ttgccgaaca caatcaaatg tccggtgctg gaaatcggta aaaattcggt
     2461 aaaaccttct accaagccca tcatcagggc tttcaggaca atcagaaaat ccattgcttg
     2521 cgcttctttc ggatacggga gttcggctat ttctgtacag caggggtctg acgcttgcgt
     2581 tcttccctga ctttggcaac caattcttta atcgtatgaa cgccgccatc aaagccatta
     2641 ttgaagataa cgcggtattt tccgccgaca ataacggtcg gcgtgccgtc aataccgtat
     2701 tgttccgtca gtttctgcat ttttaatgcg acggcggcag cttcggggga atcataggcg
     2761 cgcatcagtt ttttgccgtc aaaacctttt tgagataaag cccattttcc ggcaacagcc
     2821 ctgttttcca aacggatttt ttgttcgtaa actgctttaa acacagcaga gtttgcctga
     2881 tatttcaaac ccgacagctt gaccgcagca gccattcttg ccagaccgag catttcaggc
     2941 cgccagacca cgtgctccgt ccgcagataa gtatcagacg gcaatgcctt gcccagtttc
     3001 aataacaaag gatcgaaatg atggcaatgt acgcaaaaat agccgaaaaa ttccaaaacc
     3061 tcaatttttc ccggctgttc ttgaggaatg ggtttatcca acacaagata gtcttcccct
     3121 tccgtcaggg catatgcctg cgcggacaac actgccgaca gcagcagcgg caacagatgt
     3181 ttaaacttca taattatttg ccttcaatcg cacggatcag gctggcaacc ccatgctttt
     3241 tcaactcgtc ctgcattttt ttcaccgcat cggcagacat attgccgctt tgcacgcggt
     3301 aaagcgtttt atgtcccgcc tgatagccga ccacttcgga agatatgccc aagattgcca
     3361 gtttggcacg ctgcccttcc gcgctccggc ggtcggcata cgcgcccatt tgcagataat
     3421 gcgttgcttc cgccttgcca aacgttttca ttttctgcac ttctttggca gcggcactgc
     3481 gcgctttttc gatgctgccg ctgttgagga tttgttccgg ggtcggtttg ggtgcaactt
     3541 tttccttcgc cgcctttttc tcttcttttg aagctttttt ctctgtttct ttagacggtt
     3601 ttaccgcttg ttttttaacc gtttcggcat ctttcttctg cgctttttcc ctgacggttt
     3661 gttcacgctc ttccgtcagt gctttcttgc gcactgcctg tccgtccggc tcttcccgtt
     3721 ccggctcgcc cgccttttct tcaacctcgt cggctttgtc ggcaacgggc tgcttgtcgg
     3781 cagctttttc cgcatccgac tgctctgcct ctttcgcaac atccggttcg gacaaggcgt
     3841 tttgatcggc cggttcaggt tggatgtctt ccttaggctg gtttttcagt ttcaggattt
     3901 ccgtttctgc aggctgcttc gacggagccg ggattttgaa cgcattttga ccgccctggt
     3961 tcagataaag caaaataccg gcaataatga ccgttgccag tatcaaaccg aagaagaaac
     4021 cggacagacc ttttccggat tgggaaaatt tgttcataaa cataccttaa tgtgtttcag
     4081 acggcattaa cgccgtttgc ttacgggcgg atattctaac aatatcgcca tatttgggca
     4141 aaacctgctt ccattcccgt tcctataaag cacgacggaa gcctatggct ttcatgacgt
     4201 ggcttctgcc gacttcttca tcgcccgcca aatccgccaa tgtacgcgcc acgcgcataa
     4261 tgcggtggaa gctgcgggcg gaaagagaca atttttccag caggctaccc aaggcttcct
     4321 gcgcttcttt ttggatgcgg gcttgggaat cgagttcgct gacgctcaaa gcggcgttga
     4381 ctttgccctg ccgtgcgtat tgtttgccgc gggcggcgat gacgcgttcc aaaacggacg
     4441 cactgctttc gcccgcttcc tgctgcatca gttcggcggc ggacaggctg gggacttcga
     4501 tggtcaaatc gatgcggtcg agcagcggac cggaaatttt gcttcggtaa cgcgcgacac
     4561 tttcgggcgt gcagcggcag ggtttgacgg gatgcccgag ataaccgcac ggacacgggt
     4621 tcatggcagc gacaagctgg aatttggcgg gatagacggc ttggcgcgcc gcgcgggaaa
     4681 tgtggatttc gccgttttcc aacggttcgc gcaaaacctc caaaactttg cggtcgaact
     4741 cgggcaattc gtccaaaaat aaaacgccgt gatgcgccaa tgaaatctcg cccggacgcg
     4801 gatccgagcc gccgccgacc atagccgccg cgctggcgcc gtgatgcgga ctgcggaaag
     4861 gacggttgct gtcgagttgt tgttggtggt tgggcaggag cgaacgcaat gcccaaactt
     4921 ctaccaattc gtcttcggcc agcggcggca ggatgccggg cagccgttgg gagagcatag
     4981 acttgcctgt tcccggcggg cccatcatca agaggctgtg tccgcctgcg gcggcgattt
     5041 ccaaagcaag gcgggcagtg tgctgacctt tcacatcaca caaatcaggt tgtccgccat
     5101 gttcagacgg catttgcggt acggaacatt cggtttgcgc caaaggttcg ataccgttca
     5161 aatgagcggc gacttcgccc aaagagcgcg cgccgtaaac ggtaatgccg cgcatcacgg
     5221 cggcttgtcc tgcgttttct tcaggcaaaa caaatgcacg ttttgcctgc ataccctgcc
     5281 acgccatcgc caacgcgccg cgcacggggc gcaacaaccc cgacagtgcc aattcccccg
     5341 caaactcgta ttccgccagc ttttcgggtg caacctgccc cgatgcggca aggatgccga
     5401 ttgcaatcgg caaatcgaaa cgccccgact ctttgggcag gtcggcaggg gcgaggttga
     5461 cggtgatttt tttggcgggg aattcaaaac cgctttgaat aatggcggca cggacgcggt
     5521 cgcggctttc ctttacttcc gtatcgggca gtccgacgat gttgaaatgc ggcaggccgt
     5581 tggcaaggtg ggcttccact tcgaccaacg gcgcattcat accgctcaag gcgcggctgt
     5641 aaaccaaggc aagcgacata tttcagacgg ccttattcgc cggcttcggt ttgctgcctg
     5701 atttcggcga cggcttcttc ggcagcggct tcagccgctt ccaatgctgc ccgttcggga
     5761 ttttgcgcgg cttcgagttt cgccagacgt gcttccaaag ccgccagttt ggtacgggtt
     5821 ttaatcaaaa cctgctgctg gatgtcgaat tcttcgcgcg taaccaaatc catacggttg
     5881 aacgcgccgc ccagcatcgc cttaatattt ttttccacat ctttggcagg gctgttggcg
     5941 atggtttcgc tgattttcga gccgacttct tcaaaaagct gcttgccgaa cataatctgc
     6001 atccttcctg aacatatcaa attcaagcgg ctattgtata aggaaaaatg ccgtctgaaa
     6061 acgggcggcg gataatcgtc aaaacatacc gcgccccctt tgcggttgct aaaattacac
     6121 ttcgagacac ctgccgcctg aaaacggatt tcatattccg cgcaacgccc gattacatta
     6181 caagacacta caaaacaata tgctgtttta aatgattttt ccgatgcgca tcgtttcaaa
     6241 ctcggctttt taagccatta agtgctttgc aaacaacaga aattgggtta tgctgaaacg
     6301 gattatttac aatttcatat agtttcatta catatcttat tgtaattgaa gataatttat
     6361 ccgaatcccc tttcgggtat ccggattttc cgttgtactt tcattagaaa aacatttcag
     6421 gcgcaagttg cttgcaattt caaagcctgt aattctgaag ttttagacga ggaatagcac
     6481 atgaatccca tgtacatcac ttttgcaatc tatttggttg cagtccttct catcgggctt
     6541 gccgcttatt tttccacgcg caatttcgat gattatattt tgggcgggcg cagcctgggc
     6601 ccgtttgtta cggcgatgtc ggcaggcgcg tccgatatgt ccggctggct tttgatgggt
     6661 ctgccgggcg cgatttattt gagcggtttg aatgaggctt ggattgccat cggcctcttg
     6721 gtcggcgcgt atttcaactg gctcttggtg gcgggccgcc tgcgcgtgca taccgaatat
     6781 gccaacaatg cgctgacgct gccggattat ttcttccacc gcttcggcgc gggcggacac
     6841 ttgatgaaag tggtttccgc actgattatc ctgtttttct tcacgattta ttgcgcctcg
     6901 ggcattgtgg cgggcgcaac cctgttccaa agcctgtttg aaggtatgac ttacaatcag
     6961 gcaatgtggc tgggcgcggg cgcgaccatc gcctatacct tcttgggcgg cttcttggcg
     7021 gtcagctgga cggatacgct gcaggcttct ttgatgattt tcgccctgat tttaacgccg
     7081 gtgatggtct atctgggctt gggcggcgcg gaacagatgt ctgccgcgat tcaaagcgtc
     7141 gccgcaggca cgggcaaaga atacggcagc ctgtttgccg gtacgaccgt catcggcatc
     7201 atttccaccg ccgcctgggg cttgggctat ttcggacagc cgcacatttt ggcgcgcttt
     7261 atggccgccg aaagcgcgaa atcgctggta tccgcacgcc gcatcggcat gacttggatg
     7321 gcgttgtgcc ttgcgggcgc ggtagcggtc ggttatttcg gcattgcgta tttcggtgca
     7381 aaccccgaca aagtttcttc tatgagcggc aaccacgaac gcatcttcat cgcgctttcc
     7441 accctgctgt tcaacccttg gatcgccggc atcattttga gcgcgatttt ggcggcggtg
     7501 atgtccaccc tgtcctgcca gcttttggtt tgctccagcg cgattaccga agacttctac
     7561 aaaggctttt tgcgtaaaaa cgcgcaacag tcggaattgg tatgggtcgg ccgcctgatg
     7621 gtattggcga ttgccgtgat ttccatcctg attgcttccg atccgaacag caaagtattg
     7681 ggactggtgt cttacgcgtg ggcaggtttc ggtgcggcat tcggcccgat tgtgattctg
     7741 tccgtattgt ggaaacgcat cactgcctac ggcgcgttgt caggcatggt tgcaggtgcg
     7801 tcaaccgttg ttgtgtgggc ggaatgggta aaaaaaccgg ctcgagcggc aggcgaaagc
     7861 ggcttgttga cgatgtacga aatcgtcccg ggctttattg tttgcttgat cgttgccgtg
     7921 ttggtttccc tgttcaacaa agaaccttcg cgcgaaatcc aagaacgctt tgaaaaagcc
     7981 gacgcagatt accgcgccgc ccgataaacc cctttcagac ggcacggcat cccggttcgt
     8041 gccgtctgaa cccgcttccg ggccaaacac aaataaacct tgcctgcata caggccttat
     8101 ttgtgtttta cccgtttcat tttcaaagaa acggaagcac cgattctgcc cgcatttgaa
     8161 gccttgtatt tcatctgcgg atttattacg atattaccgt attcaggccg caccgatgcc
     8221 gtctgaaccc cccgaaaaaa ctttggagga tccaaaaaat gtttcatttt gcatttccgg
     8281 cacaaactgc cctgcgccaa gcgataaccg atgcctaccg ccgtaatgaa atcgaagccg
     8341 tacaggatat gttgcaacgt gcacagatga gtgacgaaga gcgcaacgcc gcctccgagc
     8401 ttgcccgccg tttggttacc caagtccgcg ccggccgcac caaagccggc ggcgtggatg
     8461 cgctgatgca cgagttttca ctctccagcg aagaaggcat cgcgctgatg tgtctggcag
     8521 aagccctgct gcgtatcccc gacaacgcca cgcgcgaccg cctgattgcc gacaagattt
     8581 cagacggcaa ctggaaaagc catttgaaca acagcccttc cctcttcgtc aatgctgccg
     8641 cctggggtct gctgattacc ggcaagctga ccgccacaaa cgacaaacaa atgagttccg
     8701 cactcggccg cctgatcggc aaaggcggcg caccgctcat ccgccaaggc gtaaattacg
     8761 ccatgcggct tctgggcaaa cagttcgtca ccggacagac cattgaagaa gccctgcaaa
     8821 acggcaaaga acgcgaaaaa atgggctacc gcttctcctt cgatatgttg ggcgaagccg
     8881 cctacaccca agccgatgcc gaccgctact accgcgacta tgtcgaagcc atccacgcca
     8941 tcggcaaaga tgcggcagga caaggcgttt acgaaggcaa cggcatttcc gtcaaactct
     9001 ccgccatcca tccgcgctac tcgcgcgccc aacacggccg cgtgatgggc gaactgttgc
     9061 ctcgcctgaa agaattgttc cttttgggta aaaaatacga tatcggtatc aacatcgatg
     9121 ccgaagaagc caaccgtctg gagctgtctt tggatttgat ggaggcactc gtttccgacc
     9181 ccgatttggc cggctacaaa ggcatcggtt tcgttgttca agcctaccaa aaacgctgcc
     9241 cgttcgtcat cgactatctg attgacctgg cccgccgcaa caaccaaaaa ctgatgatcc
     9301 gcctcgtcaa aggcgcgtat tgggacagcg aaatcaaatg ggcgcaagtg gacggcttga
     9361 acggctatcc gacctacacc cgcaaagtgc ataccgacat ctcctacctc gcctgcgcgc
     9421 gcaaactgct ttccgcgcaa gacgcggtat tcccgcaatt cgccacccac aacgcctaca
     9481 ccttgggcgc aatctaccaa atgggcaaag gcaaagattt tgaacaccaa tgcctgcacg
     9541 gtatgggcga aaccttgtac gaccaagtcg tcggtccgca aaacttaggc cgccgcgtgc
     9601 gcgtgtacgc cccggtcggc acacacgaaa ccctgctcgc ctacttggtg cgccgcctgt
     9661 tggaaaacgg cgcgaactcg tctttcgtca accaaatcgt tgatgaaaac atcagcatcg
     9721 accgcctgat taagagcccg ttcgacacca tcgccgaaca aggcatccac ctgcacaacg
     9781 ccctgccgct gccgcgcgat ttgtacggca aatgccgtct gaactcgcaa ggcgtggact
     9841 tgagcaacga aaacgtattg cagcagcttc aagaacagat gaacaaagcc gccgcacaag
     9901 acttccacgc cgcatccatc gtcaacggca aagcccgcga tgtcggcgaa gcgcaaccga
     9961 ttaaaaaccc tgccgaccac ggcgatgttg tcggtacggt cagctttgcc gatgccgcgc
    10021 ttgcccaaga agcggttggc gcagccgttg ccgcgttccc cgaatggagt gcgacacctg
    10081 ccgccgaacg cgccgcctgc ctgcgccgtt tcgccgacct gctcgaacag cacacccccg
    10141 cgctgatgat gcttgccgtg cgcgaagcgg gcaaaacgct gaacaacgcc attgccgaag
    10201 tgcgcgaagc cgtcgatttc tgccgctact acgcaaacga agccgaacac accctgcctc
    10261 aagacgcaaa agccgtcggc gcgattgtcg ccatcagccc gtggaacttc ccgctcgcca
    10321 tctttaccgg cgaagtcgtg tccgccctgg cggcaggcaa caccgtcatc gccaaacctg
    10381 ccgaacaaac cagcctgatt gccggttatg ccgtttccct catgcacgaa gccggcatcc
    10441 cgacttccgc cctgcaactc atcctcggcg caggcgacac gggtgcggca ttgaccaacg
    10501 atgccagcat cggcggcgtg attttcacag gctcgaccga agtggcgcgc ctgatcaaca
    10561 aagcccttgc caaacgcggc gacaatcccg tcctgattgc cgaaaccggc ggacaaaacg
    10621 ccatgattgt cgattccacc gcacttgccg aacaagtctg cgccgacgta ttgaactccg
    10681 ccttcgacag cgcgggacaa cgctgctccg ccctgcgtat cttatgcgtc caagaagacg
    10741 ttgccgaccg tatgctcgac atgatcaaag gcgcgatgga cgaactcgtc gtcggcaaac
    10801 cgattcagct cactaccgat gtcggccccg tcatcgatgc cgaagcgcag caaaacctgt
    10861 tgaaccacat caacaaaatg aaaggcgttg ccaagtctta ccacgaagtc aaagccgccg
    10921 ccgatgtcga ttccgaaaaa tccacgttcg ttcgccccat cctgtttgaa ttgaacaacc
    10981 tcaacgaact gcaacgcgaa gtcttcggcc ccgtcctgca cgtcgtccgc taccgcgccg
    11041 acgaactcga cagcgtcatc gaccaaatca acagcaaagg ctacgccctg acccacggcg
    11101 tacacagccg catcgaaggc acggtacgcc acatccgcag ccgcatcgaa gccggcaacg
    11161 tttacgtcaa ccgcaacatc gtcggtgcag tcgtcggcgt acagcccttc ggcggacacg
    11221 gtctgtccgg cacaggcccc aaagcaggag gttcgttcta cctgcaaaaa ctgacccgca
    11281 tccccgaatg ggttgccccg accctgagcc aaatcggaca ggcagacgaa gccgcgctca
    11341 aacgcctcga agccctgatt cacaaactgc cgttcaacgc cgaagagaaa aaagccgcag
    11401 cggccgcttt gggacacgcc cgcatccgca ccctgcgccg ggcagaatcc gtccttaccg
    11461 gcccgaccgg cgagcgcaac agcatctcat ggcacgcgcc aaaacgcgtt tggatacacg
    11521 gcggcagcac ggttcaagcc tttgccgcac tgaccggact tgccgcctcc ggcgtacagg
    11581 cagtggtcga acccgacagc ccgctggctt cctacaccgc cgacttggac ggtttgctgc
    11641 aaatcagcgg caaacccgaa aacaccggtg tgaaccacgt cgccgcccta agcccactgg
    11701 acagcagccg caagcaggaa ctggcaaacc gcgacggcgc actcatccgc atcctcccgt
    11761 ccggacaagg cttggacatc ctgcaagtgt ttgaagaaat ttcttgcagc atcaacacca
    11821 cagccgccgg cggcaacgcc ggcctgatgg cggttgccga ctgattttgc caaaccgccc
    11881 gggcgcggcc cgtgaacaaa tgccgtctga aaacctttca ggcggcattt tatagtggat
    11941 taacaaaaat caggacaagg cggcgagccg cagacagtac aaatagtacg gcaaggcggg
    12001 ccaacgctgt actggtttaa attcaattca ctatatgtgt tggcacatcg ctccaaacct
    12061 gatataatcc gcctttcaac atcagtgaaa atcgttcttt ttagtcagtt aacattaaat
    12121 ttcggagtcg aaaaatgaat ccagcctcaa aaaacttctc ttctcttccg cagcgcaggc
    12181 ggcaagtgaa ggcaatggcc gcggcccgta tgtgcaggcg gatctggctt acgcctacga
    12241 acacattacc cgcgattatc ccgatgcagc cggcgcaaac aaaggcaaaa taagcacggt
    12301 aagcgattat ttcagaaaca tccgtacgca ttccatccac cccagggtgt cggtcggcta
    12361 cgacttcggc ggctggagga tagcggcaga ttatgcccgt tacagaaagt ggaacaacaa
    12421 taaatattcc gtgagcataa aagagttgc
//
LOCUS       DAXGCP010000068        12058 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.068, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000068 DAXGCP010000000
VERSION     DAXGCP010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12058
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.068"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(79..495)
                     /gene="dksA"
                     /locus_tag="ACFJCW_001602"
     CDS             complement(79..495)
                     /gene="dksA"
                     /locus_tag="ACFJCW_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HFC4151702.1"
                     /translation="MVKLTEQDILNWIGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     VTTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVEAQERRERMKKQFAD"
     gene            complement(643..1452)
                     /gene="proC"
                     /locus_tag="ACFJCW_001603"
     CDS             complement(643..1452)
                     /gene="proC"
                     /locus_tag="ACFJCW_001603"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HFC4151703.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIHIANRGAEKRE
                     RLEKELGVETSATLPELHSDDVLILAVKPQDMEAACKNIRTNGALVLSVAAGLSVGTL
                     SRYLGGSRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVALAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVCRSQEMERQYQ"
     gene            complement(1483..1890)
                     /locus_tag="ACFJCW_001604"
     CDS             complement(1483..1890)
                     /locus_tag="ACFJCW_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HFC4151704.1"
                     /translation="MEIRVIKYTATAALFAFTVAGCRLAGWYECSSLSGWCKPRKPAA
                     IDFWDIGGESPLSLEDYEIPLSDGNRSVRANEYESAQKSYFYRKIGKFEACGLDWRTR
                     DGKPLVERFKQEGFDCLEKQGLRRNGLSERVRW"
     gene            complement(1890..2576)
                     /locus_tag="ACFJCW_001605"
     CDS             complement(1890..2576)
                     /locus_tag="ACFJCW_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HFC4151705.1"
                     /translation="MTVLQERYREVSDRIGKLVLQAGREPHSVGLIAVSKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSRQRRSLMPPLQVCVEVNIAGEAAKHGVAPEEAVALAVEVAKLPNLVVRG
                     LMCVAKANSSETELKTQFQTMQKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2696..3739
                     /gene="pilT"
                     /locus_tag="ACFJCW_001606"
     CDS             2696..3739
                     /gene="pilT"
                     /locus_tag="ACFJCW_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HFC4151706.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNTGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALSSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEA
                     ARRRAQNSESMSF"
     gene            3903..5129
                     /locus_tag="ACFJCW_001607"
     CDS             3903..5129
                     /locus_tag="ACFJCW_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HFC4151707.1"
                     /translation="MNTDNLHDILDETVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYYSQGSAGLVLRRINHVIPQMRELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPGHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKKDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
     gene            5246..7396
                     /gene="yccS"
                     /locus_tag="ACFJCW_001608"
     CDS             5246..7396
                     /gene="yccS"
                     /locus_tag="ACFJCW_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HFC4151708.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYEALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLSDGNDSPDIRHLSRLLDNLGS
                     VDQQFRQLRHSDSPAENDRMGDTRIAALETGSFKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVYQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIAGTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSSGTYLQKIAERLKTGETGDDIE
                     YRITRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPDMGPDDFQTALDTLRGELGTLRTRSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
     gene            complement(8022..8306)
                     /locus_tag="ACFJCW_001609"
     CDS             complement(8022..8306)
                     /locus_tag="ACFJCW_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HFC4151709.1"
                     /translation="MQPAVYILASQRNGTLYIGVTSDLVQRIYQHREHLIEGFTSRYN
                     VTMPVWYELHPTMESAITREKQLKKWNRAWKLQLIEENNVSWRDLWFDII"
     gene            complement(9084..12056)
                     /gene="pilC"
                     /locus_tag="ACFJCW_001610"
     CDS             complement(9084..12056)
                     /gene="pilC"
                     /locus_tag="ACFJCW_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HFC4151710.1"
                     /translation="MVMNGQNQPEVKSNVPSSIRDKDRKREYTHHGYNTGGGSVSFDN
                     SDELVSQQSGTAVFGTATYLPPYGKVSGFDTDSLKGRANAAGWIRTTRIALAGYSYAD
                     VVCRDITGCPKLVYETKFAFGQQGLQRKGSKLDIYEDKSRDNSPIYKLKDHPWLGVSF
                     NLGSENTVKNSKSLNKLISSFSEGNNNQNIVSTTRDHPISLGDSQREHTAVAYYLNAK
                     LHLLDKKGIEDIAQGKIVDLGILKPHVETTGRSFLNFWAKWDIKDNGQIPVKLGLPTV
                     KAGRCINKPNPNPKSALSPALTAPALWFGPAQNGKVQMYSASVSTYPDSSSSKIFLQN
                     LSRNDDKNKPGRYSLKSLNDGEIQSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAF
                     VNLNGNNTGKNDTFGIVKEANVNLDADEWKKVLLPWTVRGPGNDDKFKSINRESDKYS
                     QRYRIRENGNRDLGDIVNSPIVAVGGYLATAANDGMVHIFKKNGGSDERSYNLKLSYI
                     PGTMPRQYFDNDTSALKGSTLAQELRTFAEKGYVGDRYGVDGGFVLRQVEDRVFMFGA
                     MGFGGRGAYALDLSKINGNYPAAAPLFDVKDGDNNGKNRVKVKLGYTVGTPQIGKTQN
                     GKYAAFLASGYAAKDIVSSDNTTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDK
                     DLDGTVDIAYAGDRGGNMYRFDLSDSNPSKWSVRTIFEGTKPITSAPAVSRLADKRVV
                     IFGTGSDLSEQDVLDTKEQYIYGIFDDDTANVSVKVKDHMGGGLLEQVLSEENKTLFL
                     SNNKASGGSTDKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGAQTAILGINT
                     ADGGALTPRSARPIVPEANKDVAQYSGHKTAGGKSVPIGCMWKNSKTVCPNGYVYDKP
                     VNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLD
                     ITGPMCGIKRLSWREVFF"
BASE COUNT         2839 a         3706 c         2740 g         2773 t
ORIGIN      
        1 cttctcctcc ggctgatgcg cctttgtgaa tatgccgcct gaaactcggg gcttcagacg
       61 gcattttgtt tgcctccatc agtcggcaaa ctgtttcttc atcctctctc ggcgttcttg
      121 ggcctcaacg gataaagtgg ctgtcgggcg tgccagcagc cgcttcagac cgataggttc
      181 tcccgtatcg gcacagaatc catagtcccc ttcatcaata ttgcggatgg tcgcctgtat
      241 tttactgaga agttttcgtt cccgatcccg ggtacggagt tccaatgcgt actcttcttc
      301 ctgtgtggca cggtcggcag gatcgggggc tgattcgtgt tcttggagat gccctgttgt
      361 aacggaggcg ttttcgatga gttcgtcttg catttttacc agcaattcgc ggaaaaaagc
      421 caaatggtcg tcattcatat aatcgtcttc cggcccaatc caattcaaaa tatcttgttc
      481 tgtcagcttt accataatgt atgccctctc ggttcaccgc aaaaaaacaa agcactacaa
      541 agtggcttta ttcctttgat ttttataagg cttattgcct aaggcgtttt tgaaaacgcg
      601 catcataaca cgttttggat tggttttttt attttcttta cattattgat attgccgttc
      661 catttcctgc gaacggcaca cacaggcaca aacgccctca cttatggctt cggcgacacg
      721 atgccgtctg aaggcttcca cggcttcgtg ggttgtcccg ccttttgacg ttacattttt
      781 ttgaagcttc tcgaaatctt cacccgtctg ctcggcaagg gcaaccgctc ctttaaacgt
      841 tgccagactg agcgcgcgtg cttctgccat atcaaaccct tgtcggatgg cggcattttg
      901 caatgcgtcc agcagataaa acacataagc cggcccgctg ccgctgatgc cggtaatgct
      961 gtgcatttgc gcttcatctt ccaaccaaac ggtcaaaccg actgatttca tgattcgatc
     1021 ggcaatcctg cggtctgttt ccgatacttc cgcttcggca tacataccgg atacgcccag
     1081 cccgattttt ccaggtgtat taggcataac ccggacaatg cggcggcttc ccccgaggta
     1141 acggctgagc gtaccgaccg acaatccggc tgcgacagaa agcaccaatg cgccgttggt
     1201 gcggatattt ttgcacgcgg cttccatatc ctgcggtttg acggcaagga ttaaaacatc
     1261 gtcggaatga agctccggca gggttgccga agtttcgacc cccaactctt tttccaaacg
     1321 ttcgcgcttt tccgcaccac ggttggctat atggatgcgg tatccccctt gtttgaccaa
     1381 tccgcccgca acggcagccg ccatatttcc gccgccgaga aaataaacat tcattatttc
     1441 taccctattc aaaattacct tactaaattc attcccattt ttttaccatc ggacgcgctc
     1501 ggacaggccg ttgcgccgca acccctgctt ttccaaacag tcgaaacctt cctgtttgaa
     1561 cctctcaacc aaaggtttgc cgtcacgcgt acgccaatcc aacccgcagg cttcaaactt
     1621 ccctattttc ctataaaagt aagatttttg cgcggattca tattcgtttg ccctgacgga
     1681 acgattgccg tctgaaagcg gtatctcgta gtcctctaaa gacagcggac tctcgccgcc
     1741 aatatcccaa aaatcgatgg cggcaggttt tctcggctta caccagccgg acaaggacga
     1801 acactcatac caccccgcca gccggcagcc tgcaaccgta aatgcaaaca acgcagccgt
     1861 tgccgtatat tttattaccc gaatttccat cagccccttt tcccgaaaat cgcgctgccg
     1921 atacggacgt gtgtcgcacc gcactcaatg gcggcaggca tatcgtccga catccccata
     1981 gacagcacgt ccgccttaac gccagccgca ttgaggtcgg caagcagctt ttgcatggtc
     2041 tgaaactgag ttttcaactc cgtttcactg ctgttggctt tggcaacgca catcagtccg
     2101 cgcacgacaa ggttgggcag cttcgccacc tccacggcaa gcgcgaccgc ttcttcgggc
     2161 gcgacaccgt gttttgccgc ctcgcccgca atgttcacct cgacacacac ctgcaagggc
     2221 ggcattaagg agcgacgctg cctgctcagc cggacggcgg tcttcagacg gcatacggta
     2281 tgcacccaat gcgcgcgttc ggcgacaaat ttggttttgt tggactgcac atcgccgatg
     2341 acgtgccaca cgatgtcggt caaatccgcc aattcctccg ttttgccgta ccactcctga
     2401 atatagttct cgccgaaatc acgctgtccg gcagcgtaaa cttcgcggat gccgtctgaa
     2461 gggaaggtct tgctgacggc aatcaggccg acggaatgcg gctccctgcc cgcctgcaga
     2521 accaattttc cgatacggtc ggacacctca cgataacgtt cttgcaacac cgtcatagat
     2581 catcccctaa ttaaaaatga ttaaacagtt gaaacccctc cagtcagggc ggtataatca
     2641 aggttgttag aatcattcca accaatcgaa acattatact aaacagagcc gcattatgca
     2701 gattaccgac ttactcgcct tcggcgctaa aaacaaagca tccgaccttc acctgagttc
     2761 gggcatatcc cctatgattc gggttcacgg cgacatgcgg cgcatcaacc ttcccgaaat
     2821 gagcgcggaa gaggtcggca atatggtaac ttcggtgatg aacgaccacc agcggaaaat
     2881 ctaccagcaa aacttggaag tcgacttctc gttcgaactg cccaacgtcg cccgattccg
     2941 cgtcaacgcc ttcaacaccg gccgcggccc cgccgccgta ttccgcacca ttcccagcac
     3001 cgtcttatcg ctggaagaat tgaaagcccc gagcattttc caaaaaatcg cagaatcgcc
     3061 gcgcggcatg gtattggtta ccggccctac cggttcgggc aaatcgacca cgcttgccgc
     3121 gatgatcaac tacatcaacg aaacccagcc ggcacacatc ctgaccatcg aagacccgat
     3181 cgaattcgtc caccaaagca aaaaatccct gattaaccaa cgcgagctgc accagcacac
     3241 cctcagcttc gccaacgcgc tgagttccgc attgcgcgaa gaccccgacg ttatccttgt
     3301 cggcgagatg cgcgaccccg aaaccatcgg cttggcactg accgccgccg aaaccggaca
     3361 cttggttttc ggcacgctgc acacgaccgg cgcggcaaaa accgtcgacc gtatcgtgga
     3421 cgtattcccc gccggagaga aagaaatggt gcgttccatg ctgtccgaat cgctgaccgc
     3481 cgtcatctcc caaaacctgc tgaaaacgca cgacggcaac ggccgtgtcg cctcgcacga
     3541 aatcctgatt gccaaccccg ccgtccgcaa cctcatccgc gaaaacaaaa tcacgcagat
     3601 taactccgtc ctgcaaaccg ggcaggcgag cggtatgcag acgatggacc aatcgctgca
     3661 atcgctggtg cgccaagggc tgatcgcacc ggaagccgca cgcagacgcg cgcaaaacag
     3721 cgaaagtatg agtttctgac acacaaccgc cttccggcca taccggcggg aaaacaaggc
     3781 gcaaacacgc cgggcgggac gcggcatccc gcccggcata cccttccgaa caggaagcgt
     3841 ccgccttcct gttgaaacct gccgccgcaa actgcaaggc ttaaaccgaa aagaagctaa
     3901 cgatgaatac cgataacctg cacgacatct tggacgaaac ggttcaagtg tattctcaaa
     3961 aaaaacaaag ccgatccgaa accccggccg aaatcggcgc acacttccac ccgctgctcg
     4021 accgcctgtg cgaaaccgca gaagcacaaa acgcgtccga catccttatc agcaaaggat
     4081 tcccgccctc gttgaaaatc aacagcgcat taaccccgca gccgcaaaag gctctgacgg
     4141 gcgaggaaac cgccgccatc gccgcatcga cgatgaacgc cgaacaatcg gaaatattcc
     4201 ggcgcgacgg cgaaatcaac tactccgtcc aatcgcgcag cggcacgcgc taccgcgcca
     4261 acgcctacta cagccaaggc agcgcaggtt tggttttgcg gcgcatcaac cacgtcatcc
     4321 cgcaaatgcg ggaattgggc ttgcccgaaa aactcaaaga cctcgccgtc gcaccgcgcg
     4381 ggctgctgat tatcgtcggg cctaccggtt cgggcaaatc caccacgatg gcgactatgc
     4441 tcgaacaccg caacaaaacc ctgcccggcc atatcgttac catcgaagac ccgattgagt
     4501 ttatctacaa accgcgccgc tgcatcttta cccagcgcga aatcggcgtc gacaccataa
     4561 actggcagac ggcggtacaa aacgctatgc gccaatcccc agacgtggtc tgtatcggcg
     4621 aagtccgcag cagggaaagt atggaatacg cgatgcagct cgcccaaacc ggccacctgt
     4681 gcatttttac gctccacgcc aacaccgcgc cgcagtcgct cgaacgcata ctcaacttct
     4741 accccaaaga acagcacaac caaatactga ttgacatcgc cctcaatctg accggcatca
     4801 tctgccaacg cctcgccctc aaaaaagaca aaacgggcag gacggcggtt gtcgacttgc
     4861 tcatcaacac gcccgccatc caagacttca tcctgaaggg cgacctgatg aacatcagta
     4921 aaatcatgga aaccgccaaa accgacggaa tgcagacgat ggaccaaaac cttttcgaac
     4981 tgtaccgtca cggcatcatc agttacgaag aagccctgcg ccagtccgtt tccgccaaca
     5041 acctgcgatt gcacatccaa ctgcacaaag aaggcaaaac gcccgaactc ctttacgaca
     5101 gggtcaacgg tctcaacctc atttcctgat ccgcaaaacc caatgccgtc tgaaaaccgc
     5161 atccccgttt tcagacggca tgattttatc cgccccattc atgtgccaca ctttattcac
     5221 ttcataacaa taaaccggta aaaccatgaa aaccccactc ctcaagcctc tgctcattac
     5281 ctcgcttccc gttttcgcca gtgtctttac cgccgcctcc atcgtctggc agctaggcga
     5341 acccaagctc gccatgccct tcgtactcgg catcatcgcc ggcggcctgg tcgatttgga
     5401 caaccgcctg accggacggc tgaaaaacat catcgccacc gtcgccctgt ttaccctctc
     5461 ctcgctcacg gcgcaaagca ccctcggcac agggctgccc ttcatcctcg ccatgaccct
     5521 gatgaccttc ggctttacca ttttaggcgc ggtcgggctg aaataccgca ccttcgcctt
     5581 cggcgcactc gccgtcgcca cctacaccac gcttacctac acccccgaaa cctactggct
     5641 gaccaacccc ttcatgattt tatgcggcac cgtactgtac agcaccgcca tcatcctgtt
     5701 ccaaatcatc ctgccccacc gccccgtcca agaaagcgtc gccaacgcct acgaagcact
     5761 cggcggctac ctcgaagcca aagccgactt cttcgacccc gatgaggcag cctggatagg
     5821 caaccgccac atcgacctcg ccatgagcaa caccggcgtc atcaccgcct tcaaccaatg
     5881 ccgttccgcc ctgttttacc gtttgcgcgg caaacaccgc cacccgcgca ccgccaaaat
     5941 gctgcgctac tacttcgccg cccaagacat ccacgaacgc atcagctccg cccacgtcga
     6001 ctaccaagag atgtccgaaa aattcaaaaa caccgacatc atcttccgca tccaccgcct
     6061 gctcgaaatg cagggacaag cctgccgcaa caccgcacaa gccctgcgcg caagcaaaga
     6121 ctacgtttac agcaaacgcc tcggacgcgc catcgaaggc tgccgccaat cgctgcgcct
     6181 cctttcagac ggcaacgaca gtcccgacat ccgccacctg agccgccttc tcgacaacct
     6241 cggcagcgtc gaccagcagt tccgccaact ccgacacagc gactcccccg ccgaaaacga
     6301 ccgcatgggc gacacccgca tcgccgccct cgaaaccggc agcttcaaaa acacctggca
     6361 ggcaatccgt ccgcagctga acctcgaatc aggcgtattc cgccatgccg tccgcctgtc
     6421 cctcgtcgtt gccgccgcct gcaccatcgt cgaagccctc aacctcaacc tcggctactg
     6481 gatactgctg accgcccttt tcgtctgcca acccaactac accgccacca aaagccgcgt
     6541 gtaccaacgc atcgccggca ccgtactcgg cgtaatcgtc ggctcgctcg tcccctactt
     6601 caccccctcc gtcgaaacca aactctggat cgtcatcgcc ggtaccaccc tctttttcat
     6661 gacccgcacc tacaaataca gtttttccac cttcttcatc accattcagg cactgaccag
     6721 cctctccctc gcaggtttgg acgtatacgc cgccatgccc gtgcgcatca tcgacaccat
     6781 tatcggcgca tcccttgcct gggcggcggt cagctacctg tggccagact ggaaatacct
     6841 cacgctcgaa cgcaccgccg cccttgccgt atgcagcagc ggcacatacc tccaaaaaat
     6901 tgccgaacgc ctcaaaaccg gcgaaaccgg cgacgacata gaataccgca tcacccgccg
     6961 ccgcgcccac gaacacaccg ccgccctcag cagcaccctt tccgacatga gcagcgaacc
     7021 cgcaaaattc gccgacagcc tgcaacccgg ctttaccctg ctcaaaaccg gctacgccct
     7081 gaccggctac atctccgccc tcggcgcata ccgcagcgaa atgcacgaag aatgcagccc
     7141 cgactttacc gcacagttcc accttgccgc cgaacacacc gcccacatct tccaacacct
     7201 gcccgacatg ggacccgacg actttcagac ggcattggat acactgcgcg gcgaactcgg
     7261 caccctccgc acccgcagca gcggaacaca aagccacatc ctcctccaac agctccaact
     7321 catcgcccgg caactcgaac cctactaccg cgcctaccga caaattccgc acaggcagcc
     7381 ccaaaacgca gcctgaaaaa atttcggcat tttgtaaagg ggggcggatt gtcaggcagg
     7441 ttgcaagata gtggataagg ctttgcgcag ggtaaatgcg tagcaactga accgtcattc
     7501 cctcaaaaac agaaaaccaa aatcagaaac ctaaaatccc gtcattccca cgaaagtggg
     7561 aatccggttc gttcggtttc gcttgtttta agtttcgggt aacttccact tcgtcattcc
     7621 cgcgcaggcg ggaatccggt gcgttgagtt tcagctattt agaataaatt ttgaaactct
     7681 aatcccgtca ttcccacgaa agtgggaatc cggttttttg agtttcagtc attcccgata
     7741 aattgcctta gtattgaatg tctagattcc cgcctgcgcg ggaatgacgg cggagcggtt
     7801 tctgtttttt ccgataaatg ccgcaatctc aaatcccgtc attcccacga aagtgggaat
     7861 ctaggtctgt cggcacagaa acttatcggg taaaacggtt tctttagatt ttacgttcta
     7921 gattcccgcc tgcgcgggaa tgacggttta gaagttgccc gaaacctcaa aaaaaaccga
     7981 aaccgaacaa gccggattcc cgcctgcgcg ggaatgacgg gctaaataat atcaaaccat
     8041 aaatcccgcc aagaaacatt attttcttca atcagttgca acttccaagc cctgttccat
     8101 ttcttcaact gtttttcccg agtaattgcg ctctccatcg taggatgcag ttcataccaa
     8161 accggcatag taacgttgta ccgtgatgta aatccttcaa tcaaatgctc cctatgttgg
     8221 taaatacgtt gcaccaaatc agatgtaacg ccaatgtata acgtgccatt acgttggctt
     8281 gctaaaatat aaaccgcagg ctgcatataa tacccttttg aattatttaa atttatattc
     8341 ccgcgaacac catccagtga ttactttaac ccttcgttat ccccatagct ttccatcatt
     8401 cccgcaactc ttcgtcattc ccgcgaaagc gggaatccag aatctctaaa gcttcagcta
     8461 acctttgaat attgctgttg ttctaaggtc cggattcccg cctgcgcggg aatgacggcg
     8521 gagcggtttc tgttttttcc gataaattcc taaaactcaa aatttcatca ttcctacaaa
     8581 aacagaaaac caaaatcaga aacctaaaat cccgtcattc ccacgaaagt gggaatccgg
     8641 ttcgttcggt ttcgcttgct ttaagtttcg ggtaacttcc acttcgtcat tcccgcgcag
     8701 gcgggaatcc agaatctcta aagcttcagc taacctttga atattgctgt tgtcccacgt
     8761 tctagattcc cgcctgcgcg ggaatgacgg cggagcggtt tctgtttttt ccgataaatt
     8821 cctaaaactc aaaatttcat cattccctca aaaacagaaa accaaaaaca gaaacctaaa
     8881 attccgtcat tcccacgaaa gtgggaatcc ggttttttga gtttcagtca ttcccgataa
     8941 attgccttag tattgaatgt ctagattccc gcctgcgcgg gaatgacgcg tttcatttgc
     9001 cgccccctcc cgaaaaacgc aaaaaaatgc cgtccgaagg cctttcggac ggcatttgcg
     9061 gaaaaaccgg ccgcgcaggc gggtcagaag aagacttcgc gccagcttaa gcgtttgata
     9121 ccgcacatcg gaccggtaat atccaagctg tccaaatcgt tcatcagcag ggtgcgcacc
     9181 ccttttttgg agaagcagcg gttgtttttg ccgggacgcc tgccggcggg gtctataccg
     9241 ctgccgcccg catcgccgtc cgccgtcgtt gaaaatccgt ctgtttccgt ttcatccaga
     9301 taacgcacat taaccggctt gtcgtaaaca tatccgttcg ggcagacggt tttgctgttt
     9361 ttccacatgc agcctatggg gacggacttg ccgccggctg tcttatggcc ggaatattgt
     9421 gcgacatcct tattggcttc cggcacaatc gggcgcgcgc ttctcggagt caatgcgccg
     9481 ccgtcggcgg tattgatgcc caaaatggcg gtttgcgcgc cgcagccgtc gtctttatat
     9541 ttgcggatgg tcacgaaggc ggtacgcaat accacggtcg gtttgacggt aacgcgctgt
     9601 ccttccttca atttcactac ccagccttta tcggtcgatc cgccggatgc cttattattg
     9661 ctcaggaata aggttttatt ttcctcgcta agcacttgct cgagcagccc gccgcccatg
     9721 tggtctttta cctttacact aacattcgcc gtatcgtcgt caaagatacc gtaaatatat
     9781 tgttctttcg tatcgagtac atcctgttca ctcaaatcgc tgcccgtacc gaagatgacg
     9841 acgcgtttgt ctgccagtcg ggaaacggcg ggcgcggagg taatcggttt tgtgccttcg
     9901 aaaatagtcc ttacagacca tttactagga ttggaatcgc tcaaatcaaa gcggtacata
     9961 ttgccgcccc ggtcgccggc ataggcgata tcgaccgtgc cgtccaaatc tttatccacc
    10021 agcgtggggg acgaaagccc gcctttgccg tccttcactt cgatttttgc aatcggcgta
    10081 cctaaggtgt ctttcaaatc atacacatac agcgcggttg tattatcgct gctgacaata
    10141 tctttagccg cataaccgga ggcgaggaag gcggcgtatt tgccgttttg ggttttgccg
    10201 atttgcggcg taccgacggt gtagcctaat ttcactttca cgcgattttt gccgttatta
    10261 tcgccatctt tgacatcaaa caggggagcg gcggccggat aatttccgtt gattttgctt
    10321 aaatccaagg catacgcgcc tctgccgcca aaacccatcg cgccgaacat aaacacgcgg
    10381 tcttcaactt gacgcaagac aaagccgccg tccacgccgt agcggtcgcc cacatagcct
    10441 ttttcggcaa aggtgcgcag ctcttgggcg agggtggagc ctttgagagc ggaagtgtcg
    10501 ttatcaaaat attggcgcgg catcgtgccg gggatgtagc tgagcttcag attgtagctg
    10561 cgttcatcac tgccgccgtt ttttttgaag atatgcacca tcccgtcgtt cgcggcggtt
    10621 gccaaatacc cgccgaccgc cacgatgggg ctgttgacga tgtcgcccaa atcgcgattg
    10681 ccgttttcgc ggatgcggta tctttggctg tatttgtctg attctcggtt aattgattta
    10741 aatttatcgt cattaccggg accccgaacc gtccaaggca gcagcacttt tttccactcg
    10801 tcggcgtcaa gattgacgtt cgcttcctta acaatgccga aagtgtcgtt tttgccggtg
    10861 ttgtttccat ttaaattgac aaaagcggcg acctcatcct tgcttccatt cagtttgatc
    10921 aaatgtacgc cgtcatccaa tcggatgatt gtttgccgcc cgttgaaact cggctgtcga
    10981 ctttgaatct caccatcatt caaagatttg agggaatagc ggcccggttt gtttttgtca
    11041 tcattgcggg aaaggttttg caggaaaatt ttgctgctcg aactgtcggg gtaggtagaa
    11101 accgaagcgg aatacatctg caccttgcca ttttgcgcag ggccgaacca cagcgcgggg
    11161 gcggtcagtg ccggcgaaag ggctgatttg ggattggggt tcggtttgtt gatgcagcgg
    11221 cctgctttga ctgtcggcag gccgagcttg accggaatct gcccgttatc tttaatgtcc
    11281 cacttagccc aaaaatttag aaagcttcgt cctgtcgtct cgacgtgcgg tttcaagata
    11341 cccaaatcca ctattttgcc ttgggcgata tcttcaatcc cttttttgtc cagcaggtgc
    11401 agtttggcgt tcagataata ggccacggcg gtatgttcgc gctgcgagtc gccaagggaa
    11461 atagggtggt ctcgtgtcgt agagacgatg ttttgattat tattgccttc actaaaagaa
    11521 gatatcaatt tgttgagtga tttgctattt ttgacggtat tctcgctgcc caaattgaaa
    11581 gacacgccca accagggatg atccttcaat ttgtaaatgg gcgaattgtc gcggcttttg
    11641 tcttcgtata tatccagctt gctgcccttt ctttgcaacc cttgttgacc gaaggcaaat
    11701 ttggtctcat agacaagttt gggacagcct gtgatgtctc tgcatacgac atcggcgtag
    11761 ctgtagcctg ccagcgcgat gcgggtggta cgaatccaac cggcggcatt ggcgcgccct
    11821 ttcagactat cggtatcaaa accggaaacc ttgccgtagg gcggcaggta ggtggctgtg
    11881 ccaaaaacgg cagtaccgct ttgttgagaa acaagctcat cgctattgtc gaatgagaca
    11941 gagcctcctc ctgtgttgta cccatgatga gtatattcgc gcttcctgtc tttgtccctt
    12001 attgaagatg gcacattcga ctttacctcg ggctggtttt gcccgttcat gacaatag
//
LOCUS       DAXGCP010000069        11903 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.069, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000069 DAXGCP010000000
VERSION     DAXGCP010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11903
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.069"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            15..1158
                     /locus_tag="ACFJCW_001611"
                     /pseudo
     CDS             15..1158
                     /locus_tag="ACFJCW_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247001.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
     gene            1417..1548
                     /locus_tag="ACFJCW_001612"
     CDS             1417..1548
                     /locus_tag="ACFJCW_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151711.1"
                     /translation="MSETAKIKLNDRPENAEKPNEKVELPIVDNDKKGGHGEGGCCG"
     gene            1721..1903
                     /locus_tag="ACFJCW_001613"
     CDS             1721..1903
                     /locus_tag="ACFJCW_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151712.1"
                     /translation="MFWYVIGFCAFVVALLSLWVNAGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPKAGEKRQ"
     gene            complement(1964..2965)
                     /locus_tag="ACFJCW_001614"
     CDS             complement(1964..2965)
                     /locus_tag="ACFJCW_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HFC4151713.1"
                     /translation="MIDGQTTEPKQKTRIIPAPMRGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAD
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTGKMRLGYEDKS
                     PALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIHDTVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSTWIGQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEMDV"
     gene            complement(3042..6875)
                     /locus_tag="ACFJCW_001615"
     CDS             complement(3042..6875)
                     /locus_tag="ACFJCW_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HFC4151714.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWHILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     QQADVLIAAAEKGVELFDGSFDETRQKRRQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAVPLDANSAVIN
                     TEKLDKHRSVEYVELAGLYGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWNMVNPQGEWLRIERVRHNFGKIHDEETAVFD
                     VHTLDSDGINIVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITGVAF
                     VLHKMPKYTRTVCMEFFGTAATATPSIVEIRDFLLAHDSVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAVSPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVAAVKARWDWLLAHLDAPLADYKSRYGTA
                     VHAAPEAKDDESCFTAFRDFRLRVSVKADVMKPLAEIFSGKTDTKIIQGLGKIHAKTV
                     RSRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLGGVISGEHGI
                     GITKLEFLTDEDLQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     SMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIHNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVKGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYSDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            7136..7232
                     /gene="ffs"
                     /locus_tag="ACFJCW_001616"
     ncRNA           7136..7232
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACFJCW_001616"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            7407..9098
                     /gene="dld"
                     /locus_tag="ACFJCW_001617"
     CDS             7407..9098
                     /gene="dld"
                     /locus_tag="ACFJCW_001617"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HFC4151715.1"
                     /translation="MSASQLLSSLTQITGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQKKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKVSFLPKHFSDKAMQFVSKFLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFSHHGGAFFECNAEETQAAMLHRFAVASAAIRYRSVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNGCMALEHEM
                     LHLLEQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGIGKTSKKKNWAE"
     gene            9283..9654
                     /locus_tag="ACFJCW_001618"
     CDS             9283..9654
                     /locus_tag="ACFJCW_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HFC4151716.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     MTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVEAANPQAALAQYFGRGGG"
     gene            9794..10342
                     /locus_tag="ACFJCW_001619"
     CDS             9794..10342
                     /locus_tag="ACFJCW_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HFC4151717.1"
                     /translation="MARLTVHTLETAPEAAKPRVAAVLQNNGFIPNLIGVLANAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIRIIAARTNQCGFCVAGHTKLATLKKLLSEQSLNAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDDELKAFFDAGYNRQQAVEVVMGVALA
                     TLCNYANNLAQTEINPELQAYA"
     gene            10478..11560
                     /locus_tag="ACFJCW_001620"
     CDS             10478..11560
                     /locus_tag="ACFJCW_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HFC4151718.1"
                     /translation="MNAQTLLANVAELVKTKLKPLVDDIGRKGYYPEAFMRELGAIGA
                     VGIEAEGGNGLGLATRIAVLREIGKECGATSFSAWCQAACAWYLHQTPNQAVKDKYLA
                     DILQGKVLAGTGMSNTVKHLAGIEKHNLQAECVEGGYTVNGALPWVSNIGEDHIWANT
                     AQIGGGYVMFITGGQREGVSLQNCPEFCALEGTHTFSLNFKDVFIPDEDIIAAPEQFA
                     GYIQSIKAGFILLQIGIGAGVIDGSLGIIRLVNVVNAEVNSYLDDGYDSLKARLDGAW
                     AETERLAGLAWDNTPDNLATLKLREAAAVLALAAAQSAALHSGAKGYLMRSPAQRRVG
                     EAMFVAIVTPAIKHLCKEIAAIEAAK"
     gene            11693..11863
                     /locus_tag="ACFJCW_001621"
     CDS             11693..11863
                     /locus_tag="ACFJCW_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HFC4151719.1"
                     /translation="MAQYMCGPCGWIYDEELGDPEHGIAPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT         2717 a         3252 c         3275 g         2659 t
ORIGIN      
        1 aaaaggaagc cgatatgcga aaaaaactta ccgccctcgt attgtccgca ctgccgtttg
       61 cggcagttgc cgatgtcagc ctgtacggcg aagtcaaagc tggtgtggaa ggcaggaaca
      121 tccggctgca gttgaccgag ccaccctcag aaggtcaaac gggcaataca gttactaagg
      181 ccaaaagccg catcaggacg aaagtcagtg atttcggctc gtttatcggc tttaaggggg
      241 tggggatttg ggcggcgggc tgaaggctgt ttggcagctc gagcaagacg tatccgttgc
      301 cggcggcggc gcgacccgtt ggggtaacag ggaatccttt atcggcttgg caggcgaatt
      361 cggcacggcg ctcgccggtc gcgttgcgaa tccgtttggc gatgccagca aagccattga
      421 tccttgggac agcaataata atgtggcttc gcaattgggt attttcaaac gccacgacgg
      481 tatgccggtt tccgtgcgtt acgattcccc cggattttcc ggtttcagcg gcagcattca
      541 atttgttccg agtcaaaaca gcaagtccgc ctatacgcct gctactttca cgctggaaag
      601 taatcagatg aaaccagttc cggctgttgt cggcaagccg gggtcggatg tgtattatgc
      661 cggtctgaat tacaaaaatg gcggcttttt cggaaattat gcccttaaat atgcgaaaca
      721 cgccaatgag gggcatgatg ctttcttttt gttcttgctc ggcagagcga gtgataccga
      781 tccattgaaa aaccatcagg tacaccgcct gacgggcggc tatgaggaag cggcttgaat
      841 ctcgccttgg cggctcagtt ggatttgtct gaaaatgccg acaaaaccaa aaacagtacg
      901 accgaaattg ccgccactgc ttcctaccgc ttcggtaata cagtcccgcg catcagctat
      961 gcccatggtt tcgactttgt cgaacgcagt cagaaacgcg aacataccag ctatgatcaa
     1021 atcatcgccg gtgtcgatta cgatttttcc aagcgcactt ccgccatcat gtctgccgct
     1081 tggctgaaac gaaataccgg catcggcaac tacactcaaa ttaatgccgc ctccgttggt
     1141 ctgcgccaca aattctaaat atcggggcgg tgaagcggat agctttgttt ttgatggctt
     1201 gccttcattc ttcgattgca atctgactgc caatctgctt cagccccaaa caaaaatccg
     1261 gatacggaag aaaagcggca ataaagatag caaatcccgt ctgaagccct gattgggctt
     1321 cagacgggat ttcgcatacg gcttcccttt tcagattcgg attaaacatg ctatattaat
     1381 gaatctttca aaccgttttc caaatgaggt aaggaaatga gcgaaaccgc gaaaatcaaa
     1441 ctcaacgacc ggcccgaaaa tgcagaaaaa ccaaacgaaa aagtcgaact gcccattgtc
     1501 gataacgaca aaaaaggcgg acacggcgaa ggcggttgct gcggctgata cgtttttcgg
     1561 caaagcaggg catctgaaaa gtttcgcaaa attttcaggt gccctttttt gttttcaagg
     1621 taaatgaatg aaatactgcg gtcagaagat ttatttgctc gtgcgcttgt gataaattcg
     1681 gcactgtatt tgatatgatt ttaacaaatt tggaggggca atgttttggt atgtaatcgg
     1741 cttttgcgcc tttgtcgtcg cgctgctgtc gctgtgggtc aatgccggcg cgttcggtat
     1801 gcaggaagac gataccccgc aatcggatta tgaaaaacgt ttgggtttgg gggcgaaact
     1861 gaaaaacaaa aatacaccga aagcagggga aaaacggcaa taaagataac aaatgccgtc
     1921 tgaaaggttt tcagacggca tttgctttga agcgcgggag acatcaaaca tccatctcat
     1981 gctcaaatgc gttcaggatt cggcgcactt catccgcatc tttaaccgtt cggacgcggt
     2041 cgaacagcgt ttgcgccggg tcgaacgttt ttttcatcat gcccagccat tgcttaagac
     2101 gggcgatcgg gtatttgttg tttgcctctt ttgtcaggca cagctcgaaa aactgcccta
     2161 tccatgtgga aacttcggca aaatccgtgt ctttgaccgg tccgccgttc tcgtattgct
     2221 tgatttggcg cgccaaatcg gggcggatga ccgcaccgcg accgagcatc acgctgttgc
     2281 agccgctgat tgttttgatg ccgatatagt cctgcaggct gaaaacgtcg ccgttggcgg
     2341 taacgggaat attgacggta tcgtggattt tccttatcca ttcccaatgc gccgggggtt
     2401 cgtagccctc ggctttggtg cgcgcgtgca cggtcagtcc gcacgcgccc ccttcggcaa
     2461 tcgcacaggc gcattccaaa gcagggcttt tgtcttcata gcctagccgc attttccccg
     2521 tcagcggaat atgtgcaggc aaacgtccgc gcagcgtttt gacgatgtgg aatatcagtt
     2581 ccggctcttt cagaagaatt gcgccgcctt tgtgtttgtt gacggtgggc gcggggcagc
     2641 cgaagttcaa atcgattttg tccgcgccga atcggacggc ttccaatgcg tttgccgcca
     2701 tattgtccgc atcgctgccc agaagttgga cggtgcaggg cgtgccggaa aacgttttgt
     2761 ttccgttggc gatttcgggg acatatttta accatatgga tcgtgaatgc acggtatggg
     2821 taatgcgtac aaattcgctg acgcattcgt cgtagccgcc gatacgtgtc agcaggtcgc
     2881 gcatcacatc gtctaccagc ccccgcatgg gggctggtat gattctggtt ttttgtttgg
     2941 gttcggttgt ttgtccgtca atcatgattc gggtaggtat ttgattcaaa caatgccgtc
     3001 tgaaggcttt cggcgttcag acggcatttc cgtgtccgtt gttatagcaa cactttctct
     3061 acgccgccgt tgttggcttt ttttacaaac tcatccagcc agttttcgcc gaggatgtgt
     3121 ttcgccattt caatgacgat gtagtcggca ggcatattgt tgtcgtcgga atagcggctc
     3181 agtccttgca ggcaggcggg gcaggaggtc agcattttga cgggttcgcc ctgcggcagc
     3241 tctttgaggt ttttctcgat ttcctcttgt ttgcggaact tgacctgtgt ggcgatgtcg
     3301 gggcgtttga cggcgaacat accggattcg ccgcagcagc ggtcgcttaa aacgactttc
     3361 tgccccatca ggctgctggc catttgggtg gcgttcatgg ttttaatcgg ggtgtggcag
     3421 gggtcgtggt agaggtattg ctgacctttc acgccgtcga gtttcacgcc tttttcgagc
     3481 aggtattcgt ggatgtcgat gatgcggcag ccggggaaga tttcctcgaa gcggtatttt
     3541 tcaagctggt cgtaacaagt gccgcaactg acgacgacgg ttttgatgtc gaggtagttg
     3601 agggtgttcg ccatacggtg gaaggcgacg cggttgttgg tgctcatttc ttcggctttt
     3661 gccttgttgc cgccagcgtc ttgcggatag ccgcaacaca tatagccggg cggcaggacg
     3721 gtttgtacgc cgacgtgcca gagcatggct tggacggcga gtccgatttg gctgaacaaa
     3781 cgctccgaac cgcagccggg gaagtagaac acggcttcgg catcttcggg cgcggcgggg
     3841 ttgtggatga tggggatgct tttgccgtct tcgatgccca ataaggagcg cggtgttttg
     3901 gcgggtacgc ttttgggcag tgggcggttg atgaaatgga taacctgttc tttaatcggg
     3961 gctttgccga cggttgcctt gggttcggct ttttgctttt tcgtgccgat cggaagaagc
     4021 ttgccgattt tgtaggcaaa gttctgcgcg gggaagccgg tctgtatcat cgcggcgcgc
     4081 agggctttga tggttttcgg accggtggcg ttcaaaaacg ccatacccat tgaagccgca
     4141 ggcgcaaagc gtttgtggcc ggaatcggca aggtagttgc ggacggctac ggtaacgtcg
     4201 ccgaagtcga tgttgacggg gcagggtttg acgcagcggt ggcacacggt gcagtggtcg
     4261 ccgatgtcca tcagttcttc aaaatgtttg acggaaacgc cgcgccgggt ttgttcttcg
     4321 tataagaagg cctcggtcag caaacccacg ccgaggattt tgttgcgcgg gctgtacagc
     4381 aggttggcgc gcggaacgtg ggtggagcag acgggtttac atttgccgca gcgcaggcag
     4441 tctttgacgg aatcggcaat cgtgccgagg tctgattttt ccataatcag cgattccgcg
     4501 cccaacagct cgaaagacgg cgtgtaggcg ttgcgtaagt ccgaaccttt catcagtttg
     4561 tggcggttga aggtgtgctt ggggtcgact tggtttttgt agttccaaaa cggttgcaaa
     4621 tcttcatcgg tgaggaattc gagcttggtg atgccgatgc cgtgttcgcc ggaaatcacg
     4681 ccgccgagcg aacgggcgat tttcataatg cgttccacag aacggtaggc cgtctgaagc
     4741 atttcggcat cgtctgagtt gaccggaata ttggtgtgga cgttaccgtc gccggcatgc
     4801 atatgcaggg cgacaaagac gcggctgcgt acggttttgg cgtggatttt gcccaagcct
     4861 tggataattt tggtatcggt tttgccgctg aagatttcgg caagcggctt cattacgtct
     4921 gctttgacag acacgcgcag gcggaaatcg cggaaggcgg tgaagcagct ttcatcgtct
     4981 ttggcttcgg gcgcggcgtg gacggctgta ccgtagcgtg atttgtagtc ggcaagcggc
     5041 gcatccaaat gggcgagcag ccagtcccaa cgcgctttga cggcggcaac gtgggcgagg
     5101 gcgtgtttgc cgcgttcgcc caacagttcg gcggtcggca ggtcggtgcc cattttgtcg
     5161 atggggagtt tgcccgaaag atattgctcc aaagcggcac agagtttgag tttgttttgg
     5221 atggaaagct cgatgttgat gcgttcgatg ccgtccgaat actcgcccag ccgctccagc
     5281 ggaatcacca cgtcttcgtt gattttaaag gcgttggtgt gtttggcgat ggcggcggtg
     5341 cggctgcggt cgagccaaaa ggttttgcgc gcttcgggcg atacggcgat aaagccttcg
     5401 ccgtcacggg cgcgggcaag ttcgcagatg tgttcggcgg ctgcctctac ggcggcttcg
     5461 tcgtctgaaa ccacgtccgc cagcaagacc attttcggtc gtcctttgcc cgccgctttg
     5521 gtggcgtagc cgacggcgcg gacataacgc cagtccaaat gctccaaacc cgccagccgc
     5581 acgctgtcgt gtgcgagcag aaaatcgcgg atttcgacga tagaaggcgt ggcggtggcg
     5641 gccgtgccga aaaactccat acacacggtg cgcgtgtatt tcggcatttt gtgcaatacg
     5701 aaggcaacgc cggtaatgat gccgtccgta ccttctttct gcacgccggg cagtccgctc
     5761 aaaaatttgt cggtaacgtc tttgcccaaa ccgactttgc ggaatttgtg tccggggatt
     5821 tccaagcgtt cggttttaac gatgttgatg ccgtctgaat ccagcgtgtg cacgtcgaac
     5881 acggcagttt cttcgtcgtg gattttgccg aaattgtggc gcacgcgttc gatacgcagc
     5941 cattcgcctt gagggttaac catgttccag taggcgaggt tgtccaaggc agtaccccac
     6001 aatacggctt ttttaccgcc cgcattcatc gccacattac cacccacgca ggacgcgtcg
     6061 gcggaagtcg gatcgacggc gaacaccaag cccgcctgat gcgcggtttc ttccacccgc
     6121 cgcgtaacca cgcccgcgcc gcaccggata atcggatgtc tgccgtacaa gcctgccagc
     6181 tcaacgtatt cgacgctgcg atgcttgtcg agtttttcgg tattgatgac tgcgctgttt
     6241 gcgtccaaag gtaccgcgcc gccggtataa cccgtaccgc cgccgcgcgg gataataact
     6301 aagtccagct cgattaaggc gcgcaccaaa ggcgcgactt ccgcctccgt gtcgggattg
     6361 acgacgacaa acggatattc gacgcgccag tcggtcgcat cggtaacgtg tgttacccgc
     6421 gccagcccgt caaacataat attgtgcggc ttggtgattt tgctcaaacg ctccaaaatc
     6481 tgccgccgct tttggcgcgt ttcgtcaaag ctgccgtcaa aaagctccac tcccttttcc
     6541 gccgccgcaa tcaacacatc cgcttgctga ttatcgtcgc ggcgtttgcg gatttcgttc
     6601 aacctgtggc gcatttcccg caccagcgcg gcgcggcgtt tcggatgctc cagcaaatca
     6661 tcgaccagat acggattgcg tacgaccacc caaatatcgc ccaacacttc aaacagcatc
     6721 cgtgccgaac gcccggtttt gcgctgtccg cgcaagtcct gtagaatgtg ccacgcctcg
     6781 tcgcccagca ggcggatgac gatttcgcgg tcggtgtagg aagtatagtt gtaggggatt
     6841 tcccgaatac gctgcggggc ggtagtcgtg gtcatagtgt gtccgtgttt ggcagttttt
     6901 atttgaatgc cgtttgaaaa gtcggtttca gccgggtttg aaaaggcgat aatgtagttc
     6961 aatttttgat atttttcaat gccgaaacag gcaataccct tatagaaaca aaataacgct
     7021 ttgagaaatt gttgacaata ttatcaaata taaattttag gcggtgtttc cggcgtatga
     7081 ccgtatcaaa acggttgagt ttttcagaaa acccgttata atgccgtttc tccgaggcgg
     7141 gtctccccgc atggcaaatc ggaacaccgg gtcaggggcg gaagccagca gcccactccg
     7201 atgcgccagt gccgggggtt tggtccgccg ccctatttga aacgccggaa ttctgaaaat
     7261 tccggcgttt tcctttatgt cgccgcagcg tatacgataa cgccctttca gacggcattt
     7321 tctttacttt gccataacgt ataactacaa tgtgaaaaca attccaatgt gcatatgcac
     7381 ctgccgacaa ttttaaggaa actgccatga gcgcatcaca attactgtca agcctgaccc
     7441 aaatcacagg cgaaaaatac atcatcaccg accccgcgaa aaccgaacaa taccgccaag
     7501 gctaccgttt cggcgaaggc aaggcgttgg cggtggtgcg cccgggaagc attttggaaa
     7561 tgtggaaaat tctgcaggcc tgcgtcgaag cggacgtgat tgtgattacg caggcggcga
     7621 ataccggact gaccggcggt tcgacccccg acggcaacga ttacgaccgc gacatcgtga
     7681 ttgtgaacac catgcggatg aacatcatcc aaaccatcaa caacaacgaa caagtcgtct
     7741 gcctgcccgg ctcgaccctg aaccagcttg aactgctgct gaaacctttg ggacgagaac
     7801 cgcattcggt catcggctct tcttgcatcg gcgcgtccgt tttaggcggc gtgtgcaaca
     7861 actccggcgg cgcgttggta cagcgcggcc cggcctacac cgaaatggcg ttgttcgccc
     7921 aaatcaacga agagggcagg ttggaactgg tcaaccactt gggcatagac ttgggcgaca
     7981 cgcccgaaga aatcctgacc aacctgcaag gtcatcatta tcagaaaaaa gacatcaaac
     8041 aagacgcggg caaaggacat gaccacgcct attgcgaaca cgtccgccaa gtggacgaac
     8101 cgaccgccgc gcgtttcaat gccgaccccg cccgccatta cgaagcctcg ggctgcgcgg
     8161 gcaagctgat ggtttttgcc gtccgtttgg acaccttccc gcaagaaaaa caaaccgccg
     8221 tgttctacat cggcacgaac gacatcaacg agctgaccga catccgccgc gccgccttgg
     8281 gcgaatttga aagcctgccc gtttccggcg aatacatcca ccgccacgct ttcgacattg
     8341 ccgacgtgta cggcaaagac acgttctacg tcatcaaaaa attcggtacg caccaactgc
     8401 cgaaattatt tgacttgaag gcgcgcgtgg acaggttcgg caaaaaagtc agcttcctgc
     8461 ccaaacattt ttccgacaag gcaatgcagt tcgtcagcaa attcctgccc gaccacctgc
     8521 ccaaatccat gcgcgattac cgcgacaaat acgaacacca cctgattctg aaaatgggcg
     8581 gaaaaggcgt ggatgaggcg cgcgcgttct taaaagaata tttttcacac cacggcggcg
     8641 cgtttttcga gtgcaacgcc gaagaaaccc aagccgcgat gctgcaccgt ttcgccgtcg
     8701 cttccgccgc catccgctac cgttccgtgc acgacgacga agtggaggac ttggtcgcgc
     8761 tggatatcgc cctgcgccgc gacgaccgcg actggtttga aaaactgccg ccggaaatcg
     8821 acaataaaat catccataaa ttgtattacg ggcattttat gtgccacgtt ttccatcagg
     8881 attacatcat caaaaaaggc aacggctgta tggcgttgga acacgaaatg ctacatctct
     8941 tagagcaacg cggcgcgcaa tatcccgccg aacacaacgt cggccatttg tatgaagcca
     9001 agcccgcgct caaacagttt taccgcaaac tcgacccgac caacagcttc aacccgggta
     9061 tcggcaaaac cagcaaaaag aaaaactggg cggaataagc gcgtccgctt tgaaggcagg
     9121 caatgccgtc tgaaggcaaa acaccgttca gacggcattg tcggatctgt cttccccgac
     9181 gggcatgttc aagccgtatg tcggcacacg ggcgcgcgtc tcacaaataa agtctgatcc
     9241 taccgcccca aagggcgggg tttcaaccga aaaggaaaca cgatgaaacc atacaaaatc
     9301 tacacccatc ccgccctgcc gccccaagcc gtcaaacaag gctggtcgtg gccgggtctt
     9361 ttgttcggca cgctgtgggc gtgtttcaaa agaatgtggg gtttggggct ggggatgacg
     9421 ggcgcgatat tcgtgttggc ggtgtttgcc caactggttt acggcgacac gcccgccaca
     9481 gactcggcgt ttaacgtatt gggcttggcg gtttccgtct ggttcggcgc aaagggcaac
     9541 agcctttatg cacgccacct tttatcgcgc ggctataccg aattgcccga aacagtcgaa
     9601 gccgccaacc cccaagccgc attggcgcaa tatttcggac gcgggggcgg gtaggcgtgt
     9661 ttcccggcaa tgccgtctga aaggcttcag gcggcatttc ttataacttt ttgtttgtgg
     9721 cacagtcttt cctattccgt tccgaaatgc gtaccatgcg cccgtcccca atatttgcga
     9781 acaaggaaag aaaatggcac gtttaaccgt acacaccctc gaaaccgccc ccgaagccgc
     9841 caaaccgcgc gtagcggccg tacttcaaaa caacggcttc atccccaacc ttatcggcgt
     9901 attggcaaac gcccccgaag ccttggcgtt ttaccaagaa gtcggcaagc tcaacgccgc
     9961 caacagcctg accgccggcg aagtcgaagt gatccggatc attgccgcac gcaccaacca
    10021 atgcggcttc tgcgtggcag ggcacaccaa actcgcaacc ctgaaaaaac tcctgtccga
    10081 gcaatccctc aatgccgccc gcgctttggc ggcaggtgaa tttgacgatg ccaaactcgg
    10141 cgcgcttgcc gcctttaccc aagccgtaat ggcgaaaaaa ggcgcagtat ccgacgacga
    10201 actcaaagca tttttcgatg cgggctacaa ccggcagcag gcagtcgaag tcgtaatggg
    10261 cgtagccttg gcaactttgt gcaactacgc caacaacctc gcccaaaccg aaatcaaccc
    10321 cgaattgcag gcttacgcct gatacggcaa accgcccgaa tatcgggcgg tttttcaaaa
    10381 acaccccctc aaacaaaaac aagccgccca agcggcggga aaagcagccg cgcatcaggc
    10441 gcgcccccga ttcccccgta aaccttaagg aacaaagatg aacgcccaaa ccctgcttgc
    10501 caacgttgcc gaactcgtca aaaccaagct caaacccctc gtcgacgaca tcggccgcaa
    10561 aggatactac cccgaagcat ttatgcgcga actcggcgca atcggcgcag tcggtataga
    10621 agccgaaggc ggcaacggct taggcttggc aacacgaatc gccgtcttgc gcgaaatcgg
    10681 caaagaatgc ggcgcgacct ccttcagcgc gtggtgtcag gcggcttgcg cgtggtatct
    10741 gcaccaaacg cccaaccaag ccgtcaaaga caaatacctc gccgacatcc tgcaaggcaa
    10801 agtattggcg ggcaccggaa tgtccaatac cgtcaaacac cttgccggca ttgaaaaaca
    10861 caaccttcaa gccgagtgcg tggagggcgg ttatacagtc aacggtgcgc tgccgtgggt
    10921 gtccaacatc ggcgaagacc acatttgggc gaataccgcc caaatcggcg gcggctacgt
    10981 catgttcatc acaggcgggc aaagggaagg cgtaagcctg caaaactgcc ccgaattttg
    11041 cgccctcgaa ggcacgcaca ccttcagcct gaatttcaaa gacgtattta ttcccgacga
    11101 agacatcatc gccgcgcccg aacagtttgc cggctacatc caaagcatca aagcaggctt
    11161 catcctcctg caaatcggta tcggcgcggg cgtgattgac ggcagcctcg gcatcatccg
    11221 cctcgtcaac gtcgtcaatg cagaagtcaa cagctatctc gacgacggct acgacagcct
    11281 caaagcaagg ctggacggcg cgtgggcaga aaccgaacgg ctcgccggat tggcgtggga
    11341 caacacgccc gacaacctcg ccaccctcaa gctgcgcgaa gccgccgccg tactggccct
    11401 tgccgctgcg caatccgccg ccctgcattc cggcgcgaaa ggctacctga tgcggagtcc
    11461 cgcccaaagg cgcgtcggcg aagcgatgtt tgtcgccatc gtaacccccg caatcaaaca
    11521 cctctgcaaa gaaatagcag caatcgaagc cgcaaaataa acaggcggaa aatgccgtct
    11581 gaagcacaaa ccgcccaagg cgggacagat gcggcggcac gcttcagacg gcatccgaac
    11641 caaaccccgg cggcccgctg caaaaaagca cggtacaaac aaggaaacac aaatggctca
    11701 atatatgtgc ggcccctgcg gctggattta cgatgaagaa ctcggcgacc cggaacacgg
    11761 catcgccccc gggacaaagt ttgaagacat ccccgacgac tggaaatgcc ccgaatgcgg
    11821 cgtgggcaaa gaagatttct acctgttgga tttcgtgata tagcggcagc cgcacccctt
    11881 ggaaaatccc tcggcgtgtt ccg
//
LOCUS       DAXGCP010000070        11721 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.070, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000070 DAXGCP010000000
VERSION     DAXGCP010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11721)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11721)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11721
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.070"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            391..618
                     /locus_tag="ACFJCW_001622"
                     /pseudo
     CDS             391..618
                     /locus_tag="ACFJCW_001622"
                     /inference="COORDINATES: protein motif:HMM:NF015188.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pertactin-like passenger domain-containing
                     protein"
     gene            1295..1753
                     /locus_tag="ACFJCW_001623"
     CDS             1295..1753
                     /locus_tag="ACFJCW_001623"
                     /inference="COORDINATES: protein motif:HMM:TIGR01414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC4151720.1"
                     /translation="MPICFPPKPVGGWKNKTAAKTYRWQPEVQLSYWFTRGYGFPLSN
                     GLSAETDNFRSLMGRFGFRAGVDGLDGGRLNIYGKLMYKREFIGTIRHRFNGSAVEEF
                     KHRGGWLEYGLGVVRRNAGNGRQLYFEAQRSSMHTMRQNWQVNMGVRSMF"
     gene            complement(2236..3648)
                     /gene="trkA"
                     /locus_tag="ACFJCW_001624"
     CDS             complement(2236..3648)
                     /gene="trkA"
                     /locus_tag="ACFJCW_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HFC4151721.1"
                     /translation="MKILILGNGQVGSTVAQNLAAITNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAGTGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            complement(3746..5269)
                     /locus_tag="ACFJCW_001625"
     CDS             complement(3746..5269)
                     /locus_tag="ACFJCW_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HFC4151722.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGGKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAAPKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVNMLDKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLKQTGLLGMIGKSERGAATCEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAVYEFEVKDMPVTVAVDSKGESIHATAPRKWQAKIGIIPVES"
     gene            complement(5576..6382)
                     /locus_tag="ACFJCW_001626"
     CDS             complement(5576..6382)
                     /locus_tag="ACFJCW_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HFC4151723.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPGKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKVSSSEDLKKMNKVGVVTGHTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEGGQAAK"
     gene            complement(6434..6685)
                     /locus_tag="ACFJCW_001627"
     CDS             complement(6434..6685)
                     /locus_tag="ACFJCW_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151724.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPADTAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            6787..7557
                     /locus_tag="ACFJCW_001628"
     CDS             6787..7557
                     /locus_tag="ACFJCW_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151725.1"
                     /translation="MDTNNQDKEPNWEKRLENLRQTRRMNTAPAYVPLTKPSEVGKEE
                     PIPKLDDANRDRVLKAYLKKWQEEHNSAVADCGEEVETDPMIVLQENWLNAQASLQMP
                     VSEKHIESRRRIRFDAKKDSAEFETAQIEGGENADAAESGTAADGVAENGEGGAEEAL
                     MPVQINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGMIRTAVQKQMALFT
                     YQLQQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            7703..8872
                     /gene="metZ"
                     /locus_tag="ACFJCW_001629"
     CDS             7703..8872
                     /gene="metZ"
                     /locus_tag="ACFJCW_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HFC4151726.1"
                     /translation="MSKKLHPQTLAIRGGKEQTGYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTIAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGGH
                     VVSSRSLFGTTVGFINNIVTKFGIGVSRVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGALLVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQVAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALRIAQWLQE
                     QPQVQAVYYTGLPDHPQAELIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITNPWTTTHGRMQPEEKLAAGIRPGLVRLSVGLECVGDLIDDLKQALAR"
     gene            8967..9173
                     /locus_tag="ACFJCW_001630"
     CDS             8967..9173
                     /locus_tag="ACFJCW_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HFC4151727.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAVLF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            9569..9793
                     /locus_tag="ACFJCW_001631"
     CDS             9569..9793
                     /locus_tag="ACFJCW_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151728.1"
                     /translation="MFIFYTVNPEHVYFPKAYIMKVFKDKGYESQCITTVSFYICNPT
                     LKQKTENEAYEYGRLFVKELMHKECNRESL"
     gene            9822..11107
                     /locus_tag="ACFJCW_001632"
                     /pseudo
     CDS             9822..11107
                     /locus_tag="ACFJCW_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703147.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
     gene            11121..11432
                     /locus_tag="ACFJCW_001633"
     CDS             11121..11432
                     /locus_tag="ACFJCW_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151729.1"
                     /translation="MFETSQVTTYTATLLGAKKFKGEIDGNKIDSCTVLVASPMPSNG
                     NAVGFTSESMKFGDSHNFEKLKNLKFPCAVDLTVAMESTGKGLVQKLLDFQVKGAAPK
                     A"
     gene            11446..11649
                     /locus_tag="ACFJCW_001634"
     CDS             11446..11649
                     /locus_tag="ACFJCW_001634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151730.1"
                     /translation="MSRYQQKFIVQELENHEFIYPDSFGDIGFTSNIKSAGKYDSYED
                     AFSSALEEIGGEFVIFGFYEKED"
BASE COUNT         2894 a         2768 c         3287 g         2772 t
ORIGIN      
        1 tgcagtgtgt tatcttcata tttcgagggc aacatatctg ctaatctggt acagacccga
       61 atgttaagca gaaacgattg tctcaaaaaa agcaactttg gataaataca atcaagaatt
      121 ggctgaacta ggtgaaaatg aaaagaaaaa agaagaacta gaaaaaaagt aaaacagcaa
      181 gaaaacaaaa ttcagatcag aaaaaggcac atagaacgtc taaaagaaga catagaaaag
      241 gttgcggtac tcgaagaaga aatcaaaaga tctgaaaagt tcttcgatga aaacggttgg
      301 cttaaagaca gcattatcga cgacaaaaca aaaaacgccg tcaacctcaa aatgagcaac
      361 ggcgcgcgtt ggacggttac caatgattca atgctgaaag agttggattt gtcggaagac
      421 gcgcaggtcg aatttagcga caacaataaa ttcgtcaaag tgtccgtgag caagctcaag
      481 ggcgatggcg gcgtgttcaa aatgtatggc gacatcgtca aaggagaatc ggacaagctg
      541 attacccgaa aaggcagcga agggacgcac atcatcgaat atatggacga tgccaaggca
      601 aaaacgacgg gaagggaata tctgaaactg gtcgaaaaca agggcaatca agaagacaat
      661 aaagcatcaa ataaagcatc atacaaattg aatgtccgct gtacggaaca gggagggtgg
      721 tgttttgcct tgggtgagtc gggtgcttcc aaaaaggtca atatttccac agacggtaag
      781 cgggacttct acctctaccc ggataccctg acgccgggcg catcgagcag cgtccttttc
      841 ggcgaggcgt tgtatcagtt gaacgcggtt tccgatgaaa cgctggtgca gcgtatgggc
      901 gaaatccacg ccgacggaac gccgcaggaa gacaacaacg tttggatcaa acgcgtcggc
      961 ggaaaattct ccggcagccg cagcgattac cgcgtgggcg gttacggcaa ccgctattgg
     1021 ggctttgccg gcggcttcaa caggacgggg ttcggcgata aatggattca ttacaaaggg
     1081 ctgatgctcc gccacctcca atcgtcctac gcttccgaag actacgtcgg cagcggcaaa
     1141 atctacggca gggcggcagg tgtttattcc gcctggctca accgggaaag cagggcttat
     1201 tatgatttgg tcgccaacat cgcccgatat aagggcagct acgggctgac caattacgcc
     1261 ggcaaacggg tcgaatcgga cgaggcgcgc ctgaatgcct atatgctttc cgccgaagcc
     1321 ggtaggcgga tggaaaaaca agacggcggc aaaaacctat cggtggcagc cggaagtgca
     1381 gttgtcttac tggtttacgc gcggctacgg ctttccgctg tcaaacgggc tgtctgccga
     1441 gacggacaac ttccgcagcc tgatggggcg gttcggcttt cgggcgggcg tggacggttt
     1501 ggacggcggc aggctgaaca tctacggcaa gctgatgtac aaacgcgagt ttatcggcac
     1561 gatccgccac aggttcaacg gctctgccgt ggaggaattc aaacaccggg gcggctggtt
     1621 ggaatacggc ttgggcgtgg tgcgccgcaa tgccggaaac ggacggcagc tttattttga
     1681 ggcgcaaagg tcttcgatgc acacgatgcg ccagaattgg caggtcaata tgggcgtgcg
     1741 cagtatgttc tgatgcgcgg atacgcctga aaacaatccg gaacggtcag acgcgttccg
     1801 gattgttttt ttgtcggggc ggtttgctgc catatcaaaa caggcgggcg atgccgtctg
     1861 aaacttcgtc attcccgcga aagcgggaat ctagaacctc aaactttcag ataatctttg
     1921 aatattgctg ttgctcaatg gtttggattc ccgcaacctt tcgtcattcc cgtgaaaacg
     1981 ggaatctaga atctctaaag cttcagctaa cctttgaata ttgccgcttt ccaatggtct
     2041 agattcccgc ctgcacggga atgacgattt ggaaattacc cgaaacccaa aaacaactga
     2101 aaccgaacag gccggattcc cgctacgcgg gaatgacggg gggcggatgc cgtctgaagc
     2161 ggtgggctga agcccactct actattattt ttgcttccat accgcttggc ggcaatgtgt
     2221 ccggaatgga gcggtttatc cgaaaaagcc cattttgact tggatgagtt tctccagttc
     2281 gttcaggatg cgccggcgcg agacgaaaaa gatgatgtgg tcaccgtctt ggatgacggt
     2341 ttcggtatgg tgtcccataa tggtttcgcc ggttccggcg cggacgacgg cggcaatgtg
     2401 gcagccttcg ggccatttga tgccgctgat gcgcctgccg atgatggcgg aagttttttt
     2461 gtcgccgtgc gcgacgactt cgatggcttc cgccgtgccg cgccggatgg ggtggacggc
     2521 aacgatgtcg ccgcgccgga tgtgggcgag tatcgagccg atggtgatga ggtgggggga
     2581 gacgacgatg tcgattttgt tgccttcgag caaatcgacg tagcttgagc ggttgacgat
     2641 gccgatgacg cgcttcgcgc cgaggttttt cgccaaaagg gcggacataa tgttgctttc
     2701 gtcgtcgttg gtcagggcgc agaatacgtc gatttcgtcg atgtattcgt tgtcgagcag
     2761 ggtttcgtcg gttgccgaac cttgcaggac gagggtgttg tcgaggtttt cggctatcca
     2821 ttcggcacgg cgcggccggc attcgatgat tttgacgttg tatgcgtgtt cgagctgctt
     2881 ggcgaggcgg tagccgatgt tgccgccgcc ggcaatcatg atgcggcggg tgctggtttc
     2941 tttggggcgc aattcgggta tgaccgcccc gatgttttcg gcggcggcgg caaacaggat
     3001 ttcgtcgcct tcgatgatga cggtttgcgg cgcggggacg atgaggcggt tgttgcggta
     3061 aacggcgcag atttggcagt cggccccgtc gggcaaatct tgggcgatgt cggcaatgct
     3121 gcgtccgaca agcagcccgc cgcgccgcgc ctgtatgatg accatccgca cgcggtcgtc
     3181 tgcaaaacgt aaaacctgca atgcgcccgg gcagtctatc aggccggcaa gctgttcggt
     3241 aacgagctgt tcggggctga tggtttcggt tatgccgaat atggaaaggc tgccgttttc
     3301 gttgttttcg agcttggggc tgaggtattc gaggtattcg ctggaacgga cgcgcgcgat
     3361 gcggccgggg atgttgaaca ggtcggcggc aactttgcag gcgacgatgt tggtttcgtc
     3421 gctgcgggag agcgcgagca gcaagtcggc atcttccgcg ccggcgcgtt ctaatgtgaa
     3481 gggggatgcg ccgttgccga aaacggtttg gacatcgagg cggctgcctg tttcctgcaa
     3541 tgctttttcg tcgatgtcga taacggttac gtcgttgttg gtgatggcgg caaggttttg
     3601 cgcgacggta gaacctacct gcccgttgcc taaaatgagg attttcacgg tatgggtcgc
     3661 cgggtgatga aatggtggat tgtaccgcaa ccggcggcgg aaatgccgtc tgaaggcaga
     3721 ttttgcgttc agacggcatt gcgcttcaag actcgacggg gatgatgccg attttcgcct
     3781 gccatttgcg cggggcggtg gcgtggatgg attcgccttt gctgtccacg gcgacggtta
     3841 cgggcatatc tttgacttca aattcgtaaa cggcttccat acccaattcg gggaacgcca
     3901 agactttgga agatttgatg gcttttgcca cgaggtatgc cgcgccgccg actgccatga
     3961 ggtacacggc cttgttgtcg gcgatggctt cgcaggtggc cgcgccgcgc tcggatttgc
     4021 cgatcatgcc caagaggccg gtttgtttga gcatttggcg ggtaaatttg tccatgcggg
     4081 tggctgtggt cggacctgcg ggaccgacga cttcatcgcc gaccggatcg acggggccga
     4141 cgtagtaaat caggcggttg gtgaaatcga cgggcaactc ctcgcctttg tcgagcatat
     4201 tgacgaggcg tttgtgcgcg gcatcgcggc cggtgaggat tttgccgttc aacagcaata
     4261 cgtcgccggt tttccagctt gccacttctt ctttggtcag cttatcgaca tcgacgcgtt
     4321 tgccgttgtc ggggctgtaa gtcagatcgg gccagtcttc gacgcgcggc ggcgtgagtt
     4381 cgacaggacc tgagccgtcc aattcaaatt cgacgtggcg ggtggcggca cagttgggaa
     4441 tcatggcaat cggtttgggg gcggcatggg tcgggtaatc gaggattttc acgtccaaca
     4501 cggtggtcag accgcccaag ccttgcgcgc cgatgcccag cgcgttgacc ttttcaaaga
     4561 gttcgaggcg cagggcttcg gtggtggaca attccgcgcc ggacgcggct ttttcctgca
     4621 attcttggat gtcgatgtgg ctcatcaggg attctttcgc catcaacacg gctttttcgg
     4681 gcgtgccgcc gatgccgatg cccaagatgc cgggaggaca ccagcccgcg cccatcgtcg
     4741 ggatggtttt caatacccaa tcgacgatgt tgtcggaagg gttgagcata gcgagtttgg
     4801 atttgttttc agagccgccg ccttttgccg cgcaggttac ttcgacttta ccgcccggca
     4861 cgatgctcat gtggatgacg gcgggggtgt tgtctttggt gttttggcgt ttgccggccg
     4921 gatcggcgag gacggaagcg cgcagggtgt tgccttccca agtgtaggcg cggcgtacgc
     4981 cttcgttaac catctcttcc acgctcatgt ccgcatccca ttgcacatcc ataccgactt
     5041 tgaggaagac ggttgcgata cctgtgtctt ggcagatggg gcggttgttt tcggcacaca
     5101 tacggctgtt gaccaaaatc tgcgtcatcg cgtctttggc ggcgggattt tcttccttct
     5161 gccacgcctt ataaagcgcg tcgatgtagt cttttggatg gtagtagctg atgaattgga
     5221 aggcatcgca gatactttga ataaagtctt cttgcttgat aacggtcatg attgtgttcc
     5281 ttttcaaggt tgtggcggta agtgtctgct gctgttttaa acaacctttt tgaaggctgt
     5341 tttttatcag gttgaaatag tgccagcgtt tgtacggtga agacaataca taattctaat
     5401 ctcttgatta tcaatttgtt ttaataaaat actgttttat tcggattttg atatttgtaa
     5461 tctttgcctg ttgctttgcg gtagggagaa atcagcaggc agttcattgt ggaccggttg
     5521 atgaacaatg ccgtctgaaa gggcttcaga cggcattttg ttcggacggg cgggcttatt
     5581 tcgcagcctg tccgccctct ttggcaaaat atttggcgta gatcttgtcg tattcgccgc
     5641 tttcgcgtac tttttccaac gcatcgttca gcattttgac ggttgcttcg tcgcctttgc
     5701 gtaccgcgat gccgtagtgt tcggtggtga agtcgggcag ggtaacgaag tccattcctt
     5761 tggccgggtt gtttttcaca taattggcga tgaccgcgct gtcgctgacc acggaatcca
     5821 agccgccgtt ttccagttct ttgataatca gggggacgtt ttcgaagcgc gcgattttcg
     5881 gattgtcgtt gcccaagagt ttggaaacgg agaaatcgcc cgtgtggccg gtaaccacgc
     5941 cgactttgtt catctttttc aaatcttcgg aagaagatac ttttttgcct ttcggaacga
     6001 ggacgacttg ggtgatttca aaatacgggt cgctgaaatc catagactgt ttgcggtcgt
     6061 cggtaatggt tacgcccgac atcacaacgt ccgcatcgcc gttgttcaag gcggggaaaa
     6121 ggctgtccca cggctggtgt ttgaattcga ttttaaaatt gcccgccttc gccatcgcgt
     6181 tcatcaaatc cacgtcgaaa ccttcgacat tgcctttcga gtctaaagat tcaaaggggg
     6241 caaactcggc gttggaagcc acgcggtaca ctttgccggg gttggcggca ggcgcggcgg
     6301 catctttgcc ctgaccgccg caggcagaca gcgcgagtgc ggaacaggca agggcggcgg
     6361 caatccattt tttcatattc atcaaaattc ctttcggtaa tcaaaaagcc taaaaaatca
     6421 gtttaacata aaattaacgt tccttttcac ggaaaaacgc ataagtaacg tcgtggaaca
     6481 aatccgtatg cgggctgtcc tcatagctca attctgccaa ggcgtcctca aaagcaagct
     6541 gaatcgactc gaccgcgatt tcggcggtgt ctgcgggaag ggcgcggatc agggctttga
     6601 aggcggtgga caggacgtgg ttctgcatac gcagcacatc gtttgcttct tccagatatt
     6661 ccaaacgctg ttcgatgctg cccatgatgt atcctcgcga atctgttaaa atgcgccatt
     6721 atatcaaact gcgctttggg cgcgggtttg cccgcctgca aagattaaga accggaagcc
     6781 gaaaaaatgg atacaaacaa tcaggataaa gagccgaatt gggaaaaacg cctggaaaac
     6841 ctgcgtcaga cgcgccgtat gaataccgcg cctgcctatg tgccgctgac caaaccttct
     6901 gaagtcggaa aggaagagcc cataccgaaa ttggacgatg caaaccgaga ccgtgtgtta
     6961 aaggcgtatc tgaagaaatg gcaggaagaa cacaacagcg ccgttgccga ttgcggcgag
     7021 gaagtcgaaa ccgacccgat gatcgtcctt caggaaaact ggctcaacgc gcaggcttcc
     7081 ctgcaaatgc cggtttcgga aaaacacatc gaatcgcggc ggagaatccg gttcgatgcc
     7141 aaaaaagaca gtgccgaatt tgaaaccgca cagattgagg gcggggaaaa cgccgatgcg
     7201 gcagaatccg gtacggcggc agacggggtt gcggaaaacg gcgaaggcgg tgcggaagag
     7261 gcgttgatgc ccgtccaaat caatatcctg aacccgaaag ccgtcaaccg gcgcgaagtg
     7321 ttctgcctgt ccgaacagga gctgaccgaa cggttgatca aacgcctgcg cccgcatctg
     7381 accgataccg tcaacggcat gatccgtacg gcggtgcaga agcagatggc gctctttact
     7441 tatcagctcc agcaaatgct gcacgagcag gcgggtgcgg tagtcgaaga cgtgttggaa
     7501 cacgatgtcc gtaaaatcct caacgacatc aagtacgaat taaaatacaa acgctgattg
     7561 ccatgccgtc tgaaagccgt gttcagacgg cattttcctg cccgtccgac ttgaaagcct
     7621 catggaacag gcgcaaaata ttaataaatt aaacaacggg tgcacgcccc gttgccgaac
     7681 ggacaaaacc gaggaatcac cgatgagcaa aaaacttcat ccgcaaacgc tcgccatacg
     7741 cggcggcaaa gaacaaaccg gataccgcga acacaatcag gcattgttcc tgaccagcag
     7801 cttcatgtgg gacaacgccc aacacgctgc cgatttgttt tcaaaaaaaa tcaaaggctt
     7861 cacttatacc cgtaccgcca acccgaccat cgcggccttt gaaaaacgca tagccgcttt
     7921 ggaaggcgcg gaacgcgcgg tcgccacttc gaccggcatg tccgcgattc aggcggcgtt
     7981 tttcaccttc ctgcaggcgg gcggccatgt ggtttccagc cgcagcctgt tcggcacgac
     8041 cgtcggcttt atcaataaca tcgttaccaa attcggcatc ggagtgagcc gcgtgtcgcc
     8101 gactgatata aatgaatgga aagccgccgt caaagccaac accaaactgc tgtttttgga
     8161 aacgccgtcc aaccccttgg gcgaagtggc cgacttggaa gccttggcgg aattggcgca
     8221 cggcatcggc gcgctcttgg tggtggacaa cagcctgctg tcgcccgtcg gctcgcagcc
     8281 tttgaaacac ggcgcggata tttccgtttc ctccgccacc aaagccatag acggacacgg
     8341 gcgcgtgatg ggcggcgtgt tggcgggttc ggaagaactg atggcgcagg tcgccgttta
     8401 ctgcaactct tgcggtttgg cgatgtcgcc gtttaacgcg tggcagttgt tgagcggcgt
     8461 ggaaaccctg tcgctgcgta tggaaaaaca gtttgacaac gccttgagaa tcgcgcaatg
     8521 gctgcaagag cagccgcagg ttcaagcagt gtactacacc ggattgcccg accatccgca
     8581 ggcggagctt atccgcaaac agcaaaacgg cggcggcatc gtcatcggtt ttgaagtcgc
     8641 cgaccaagca gccgcgtgga aagtcgtgga cggcgtggaa ctcttttccc gtaccgccaa
     8701 cctcggcgac gtgcgctcga ccatcaccaa tccgtggaca accacgcacg gcaggatgca
     8761 gcccgaagaa aaactcgccg ccggtatccg ccccggactg gtgcgcctgt cggtcggttt
     8821 ggaatgtgtt ggcgatttga ttgacgattt gaaacaggca ctcgcgcgct gattgcgtgt
     8881 ttcagacggc atcggcggaa aaatgcggca gatgccgtct gaaaccctta ttgcgtatgg
     8941 catacacatc aacaatagga aaaaatatgg atgaagcggt ttttgccgat tgggcgttga
     9001 aaatctgcct gaccggtttg attatttttt tgggttttat cgtttggaat ttgggcaagg
     9061 agtccaaagc aggcaaattc ggcatcgccg ttttgttttt ggttttgggc ttgggtgtgt
     9121 tcggttttgt gttcaaagag ttattgatta agtttttggt attgcccaaa taggtttgcc
     9181 gtctgtcgaa atgccgtctg aaatcataaa aagtaatctg caccctaaaa gtttgattta
     9241 accgccaact gattaaggtg cgggttttta tgacaaaata aaaatcatct ttccgcaatc
     9301 attcccacgg atgcgaaagc ctgtcttttt gaatcccgga taattttaca tcgtcattcc
     9361 cgcgcaggcg ggaatctagt ccgttcggtt tcagtcattt acgataaatt cctgttgcct
     9421 ttcatttccg gattcccact ttcgcgggaa tgacggagga gcggataaat tctcgcaatc
     9481 taaaacctta tatattgcgc tccataaggg gcgcatattt ttaatccttg taaagcccct
     9541 taactctagt cagtgaaggg gcttaatcat gtttattttc tatactgtca atcccgaaca
     9601 cgtatatttc cccaaagcat acatcatgaa agtgttcaag gataaaggct acgaatccca
     9661 atgcatcaca acagtttctt tttatatctg caatccgact ttgaagcaaa agaccgaaaa
     9721 cgaagcgtat gaatacggca gattgtttgt taaagaactg atgcataagg aatgcaaccg
     9781 tgaaagcctt tgaagataaa gccttggcgg tgtccgcgga catggcggac gcgttagcgg
     9841 acggcggggc tgcggcaacc gccgtaggct gcccccctag gctaataggg gggagcaaaa
     9901 taaaacccca aatccgaagg gtgcggaaaa aacagaaaac caagaatttc aattcgagta
     9961 tttcagtcat tttgtatcgg acggcaaagg cagatttata gaaataccgt taaggcgtgg
    10021 cagggatgac ggagcgttca tagaccaaat cactttcacg atacatgaaa attccatgac
    10081 gaaagtaacc ggaaagggat tggtatcaga tacggaattc gttgtccggt atagcgagct
    10141 gcttgaagaa atcttgggat tcggcattac caaaaaatta ccgtttaaag gaaagttttt
    10201 ctatcaaagc tgttatcaat tcgggcccga taacgtcgaa tacggaaagg ttcattacgg
    10261 cggccaatgt gaaacgatgt tggttgaatt gaacggtaca ggctgcatgg ctgctttacc
    10321 cggttgggaa aaccgattgt atgaattttt aagtaaatgc gtccgaccca aaataacccg
    10381 tatcgatgtc gcccatgatt ttttcaacgg agagtacaca cccgatcagg caatgttaga
    10441 ccacgataac ggacattacg acgtacacaa tatgcggcca aaaagcgaat gtcgcggcac
    10501 ggcatggcgc aatgaagacg gcagtggaaa aaccttttac atcggcaagc gcggaaattc
    10561 aaaatttacc cgtgtttacg agaaaggcag acagcttgga gatgttgata gcccttgggt
    10621 caggtttgag ggggatatag aaataccctt ggatgtccta ctttattcgg ggtcgtatct
    10681 aggcggcgca tatccgattt gcaaggagat ttttaagaca gaagccaagc gcatggaagt
    10741 aaaagttaaa aacgttaatc tgatattcga cgttaagctt tttcatgcaa ggaatcaagt
    10801 cggcaagatg gttaatttcc tccgcgatat agggtgggac gatagcagga tagttgatga
    10861 gctggtgaaa ggcgttgaag gttatccaaa aggtttacag cctgagcaat acgattgcaa
    10921 aaaccaaacg cagaaattcc agtatatcca cgaagaacag aaagccatta acgcattgaa
    10981 cattgaaaca ctgtttgatg atttgattga agagagagaa tacgcatttc ctcaagacag
    11041 ggaacggcaa cacatcaagg atattgagta cgaggaacgt caaatatccg attttttaaa
    11101 caactgaagg aaattgaaaa atgtttgaaa caagccaagt aaccacatat accgccactt
    11161 tgttgggcgc aaaaaaattc aaaggcgaaa tcgacggtaa caaaatcgat tcatgcaccg
    11221 tcttggtagc cagccccatg ccgtcaaacg gcaatgccgt gggctttacc tcggaaagca
    11281 tgaagtttgg tgacagccat aattttgaaa aattgaaaaa ccttaaattc ccctgtgcgg
    11341 ttgatctaac cgttgccatg gaatcaacag gaaaaggctt agtgcagaaa ttgttggatt
    11401 tccaagtaaa gggcgcagca cctaaagcct aagaaaggct gaatcatgag cagataccaa
    11461 cagaaattta tcgtacagga attggaaaat cacgaattca tctatcccga ttcgtttggc
    11521 gatattggat ttacgtcgaa catcaaatca gccggtaaat atgacagcta tgaagacgct
    11581 tttagctcgg cattggaaga gataggcggg gaatttgtaa ttttcggatt ctacgaaaaa
    11641 gaagattaag tttaagaggc tcggcaggcg gtctctaaaa ccttcacaaa gcccgcaaac
    11701 acattttttt aaaaatttcg t
//
LOCUS       DAXGCP010000071        11627 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.071, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000071 DAXGCP010000000
VERSION     DAXGCP010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11627
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.071"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..186
                     /locus_tag="ACFJCW_001635"
     CDS             <1..186
                     /locus_tag="ACFJCW_001635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151731.1"
                     /translation="NNLSLMFSKNYKSLGSKGKLEKKCSVCSARNPISNRVCWQITML
                     LKAGFILKLAFGKDRSF"
     gene            580..2292
                     /locus_tag="ACFJCW_001636"
     CDS             580..2292
                     /locus_tag="ACFJCW_001636"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HFC4151732.1"
                     /translation="MKASQFFISTLKEAPAEAAFASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHER
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQATYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERAAAQAVLTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGELVLLLLRGDHEFNDIKAEKLAGVKSPLTMASPAAIVEQFGANGG
                     SLGPVGFTGKVYADFATEKGADWVIGANEDDYHYTGFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRGKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADRIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRDNEAQAVAIGEIVARVTA
                     SLNA"
     gene            2355..3011
                     /locus_tag="ACFJCW_001637"
     CDS             2355..3011
                     /locus_tag="ACFJCW_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HFC4151733.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHVEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLIGRDSDGTGEGEDILGCVAGYGVGLDLTA
                     RDIQCRLKAQGLPWLKAKGFRHSACVSDFAAADRIGNQDKVLFSLKQNGVLKQRGETG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVCASFTIGC
                     "
     gene            complement(3021..3476)
                     /gene="ruvX"
                     /locus_tag="ACFJCW_001638"
     CDS             complement(3021..3476)
                     /gene="ruvX"
                     /locus_tag="ACFJCW_001638"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HFC4151734.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLATVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHADGTEHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVLGKKRKSVLDQVAAQAILHGFLEGGPAECFNGREG"
     gene            complement(3469..4017)
                     /locus_tag="ACFJCW_001639"
     CDS             complement(3469..4017)
                     /locus_tag="ACFJCW_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HFC4151735.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDGIALTS
                     SRDVLENISREGAVDKALISIGYSSWSKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(4019..4579)
                     /locus_tag="ACFJCW_001640"
     CDS             complement(4019..4579)
                     /locus_tag="ACFJCW_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HFC4151736.1"
                     /translation="MNRLLLLSAAVLPTACGSGETDKIGRASTVFNMLGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKRGTGFAFKSRQIVRYYDPKRKAFAYLVYSDKIVQGSPKNSLSAVSCFGSGIPQTDG
                     VQADTSGKLLAGACIISNPIKNPDKR"
     gene            4906..6702
                     /locus_tag="ACFJCW_001641"
     CDS             4906..6702
                     /locus_tag="ACFJCW_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC4151737.1"
                     /translation="MQYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQAKNKKEQPE
                     AAEGKKEKGKNAAVKDKKTGGKEAAKEFKKTAKNRKEAEKEATSRQSARKGREGDKES
                     KAEHKKAHGKPVSGSKEKNAKTQPENKQGKKGAKGQGNPRKGGKAEKDTVSANKKARS
                     DKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVSNSL
                     KQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAATKA
                     QISRFVSGNYKNSRPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQKAL
                     AVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKISKDARKLLEQKG
                     NEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRAEMS
                     NLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGVFYS
                     TAPATVESIAPGTVSYADELDGYGKVVVIDHGENYISIYAGLSEISAGKGYTVAAGSK
                     IGTSGSLPDGEEGLYLQIRYQGQVLNPSGWIR"
     gene            6829..8304
                     /locus_tag="ACFJCW_001642"
     CDS             6829..8304
                     /locus_tag="ACFJCW_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HFC4151738.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDGRDNEVLPVQ
                     SIRTMAEVYGQIKANYYHDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAEVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELVKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDGMVLKAVPEDYVYGMGGDPLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERT
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAAKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKK"
     gene            8634..10661
                     /gene="uvrB"
                     /locus_tag="ACFJCW_001643"
     CDS             8634..10661
                     /gene="uvrB"
                     /locus_tag="ACFJCW_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HFC4151739.1"
                     /translation="MEVIRYPNSPFKLHQPFPPAGDQPTAIAGLIEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAVDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDAIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKENLLFGAE"
     gene            complement(10839..11597)
                     /gene="cah"
                     /locus_tag="ACFJCW_001644"
     CDS             complement(10839..11597)
                     /gene="cah"
                     /locus_tag="ACFJCW_001644"
                     /EC_number="4.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HFC4151740.1"
                     /translation="MPRFPRTLPRLTAVLLLACTAFSAAAHGNHTHWGYTGHDSPESW
                     GNLSEEFRLCSTGKNQSPVNITETVSGKLPAIKVNYKPSMVDVENNGHTIQVNYPEGG
                     NTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTN
                     GRLSSIWNVMPMTAGKVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKT
                     YDHIDQAQAEKFTRAVGSENNRPVQPLNARVVIE"
BASE COUNT         3007 a         2929 c         3198 g         2493 t
ORIGIN      
        1 aataatttaa gtttaatgtt ttcaaaaaat tataaaagtc ttggaagcaa gggaaaactt
       61 gaaaaaaaat gttcggtctg ctccgcacga aatcctatca gcaatcgggt ctgctggcaa
      121 ataaccatgc ttttaaaagc aggttttata ctgaagttgg cgtttggtaa ggacaggtct
      181 ttttgattgc gaaaacattc tgtttaattt tggttatatt ttttcggaat tgtgggatat
      241 cgaatcgtta tgtctctgtc ggcaattttc ctattgcaga aaatctatac acaagctttg
      301 tggacaaccg tgttgataag ccacggcttg tgttaaaaaa gtcttacgca acaaatgtac
      361 gcttattttg attaaaaatt aggcaaattt aaatctataa aaatcatgta attatgttca
      421 atatgatgtt tctggtcatg tttttgccgt ctgttatggg gtttgtcccg cgtttggggc
      481 agggggtgaa ttttggaggt tggtgcaaaa cctgcttttt tcgcgttaca atctgcaccc
      541 gatttacttt tgaatctgcc tgtttggaaa aatactttta tgaaagccag ccaattcttt
      601 atctctactt taaaagaagc ccctgccgaa gccgcgtttg ccagccacaa gctgatgatt
      661 cgcgccggtc tgattaaagc caacgcgtcc ggtctttata cttggatgcc gatggggctg
      721 cgcgtgttac gcaaagtcga aaacgtcgtg cgcgaggaaa tggcgcgcgc gggcagcgtg
      781 gagctgctga tgccggtggt gcagcctgcc gaactgtggc aggaatccgg ccgctgggag
      841 ttttacggta aagaactgct gcgcctgaaa gaccgccacg aacgcgattt ctgcatgggc
      901 ccgacctgcg aggaagtcat cgccgacatc gtgcgcaaag aaatcaacag ctacaaacaa
      961 ctgccgaaaa atttttacca catccaaacc aaattccgcg acgaagtgcg cccgcgtttc
     1021 ggcgtgatgc gcgcgcgcga atttgtgatg aaagatgctt attccttcca cgccgactac
     1081 gcctcgcttc aggcgaccta tgatgccatg tatgacgctt actgccgcat ctttacccgt
     1141 ctgggtttgg cgttccgccc cgtcgccgca gacaccggca gcatcggcgg tacgggttcg
     1201 cacgagtttc aagtgttggc ggaaagcggc gaagatgtga ttgcatacag cgacacttcc
     1261 gattacgccg ccaatatcga gttggcaccg accttgccgc ttaaaggtga acgtgccgcc
     1321 gctcaggctg tgttgaccaa agtacataca ccaaacgtca aaaccattga gtctttggtt
     1381 gaattcctga atattccggt tgaacaaacc ctcaaatcca tcgtggttga aggcgaaaac
     1441 gaaggcgaac tcgtcctact gctgttgcgt ggcgaccatg agtttaacga catcaaggca
     1501 gaaaaactgg cgggcgtaaa atcgccactg actatggcaa gccctgccgc gattgttgaa
     1561 caattcggcg caaacggcgg ttcgctcggc cccgtcggct tcacaggcaa agtctatgcc
     1621 gatttcgcta ccgaaaaagg cgcggactgg gttatcggcg caaacgaaga cgactaccac
     1681 tataccggct tcaacttcgg ccgcgatgcc gccgagcctg aattcgtcga tttgcgtaat
     1741 gtggtcgaag gcgacgaaag ccccgacggg caaggccgtc tgaaactggc gcgcggcatc
     1801 gaagtcggac atgtcttcca gttgcgcggc aaatataccc aagctatgaa cgtcagcttc
     1861 ctcgacaata acggcaaatc gcaaatcatg gaaatgggct gctacggcat cggcatcacc
     1921 cgcgtcgttg ccgccgccat cgagcagaat aacgacgaaa aaggcatcat ttggaccaaa
     1981 gcgatggcgc cgtttgaagt cgtcatcgtg ccgatgaact acaaaaaatc cgacactgtg
     2041 cgtgaagccg ccgacagaat ctatgccgaa ttgctggcgg caggcgcgga tgtgctgctg
     2101 gacgaccgcg acgaacgcgc aggcgtattg ctgaacgatt ccgagcttct cggtatcccg
     2161 caccgcatcg tcatcggcga ccgcgccttg aaagaaggca atgtcgaata cgccgaacgc
     2221 cgcgacaacg aagcgcaggc agttgcaatc ggagaaattg ttgcgcgtgt aacagcttca
     2281 ttaaatgcgt aagtctggtc aaatgccgtc tgaaaataat ttcagacggc atttttattt
     2341 tgggggaaag tgaagtggct tcagtatttt tagaaggaga agcagtcgag gtcggcaata
     2401 ttttctgtat cggcaggaac tatgccgcac atgtcgaaga gttaaaaaac gaaatacctt
     2461 cagaacctgt ggtgtttatg aagccgtcag gcagcatttt gaacagcggc ggtacaatct
     2521 tgctgcccga gttcagtagg gatgtgcagt ttgagtgcga actagtgttg ctgattggcc
     2581 gggattcaga cggcacgggc gagggtgaag atattttggg atgcgtggcg gggtacggcg
     2641 tgggtttgga tttgaccgcg cgggacatcc aatgccgtct gaaggcgcag gggctgccct
     2701 ggctgaaggc aaaagggttc aggcattctg cgtgcgtgtc ggattttgcg gcggcagaca
     2761 gaatcggcaa tcaagataag gtgttgtttt cattaaaaca aaacggcgta ttgaaacagc
     2821 gcggggagac tggtttgatg atttacccga ttcgggaaat tttacacaaa ctggcggcgg
     2881 attacggttt ggggaaaggg gatttggtgt ttaccggaac gccctccggc gtgggcgcaa
     2941 tcggtgcggg ggacaatttg gcattggagc tggacggctt ggtgtgcgcc tctttcacga
     3001 tagggtgtta accgcgccgc ttaaccttca cgcccgttga aacattccgc cgggccgccc
     3061 tcgagaaaac cgtgcaggat ggcttgcgcc gccacttggt cgagcaccga tttgcgtttt
     3121 ttgcccaaga cctgtgcttc cgaaagcagg ctttcggcat agacggacga cagccgttcg
     3181 tcaacccaat agacggggag attgaacctg ccgttcagcc tgcgtccaaa cttgcgcgac
     3241 aggtgcgtca tttcatgttc cgtgccgtcg gcatgcacgg gcagtccgac gacaaaataa
     3301 cgcggctgcc attcttgaac cagcttggcg attgccgcga atttttcatc gttgctgccg
     3361 ccggtaacgg tggccagcgg atgggacagc cccaattccg catcgccctg cgccacgccg
     3421 atgcgcgctt cgccgaagtc gaatgccagt gccgttcctt ttggaatttt atgcatggcc
     3481 ggctcccgaa aacagggcga gcgggtcgat gccgagtttg gcgaatgcgg cggcgtaacg
     3541 gtgttcgtag gggatgtcga acaggatgtg ttcgtcggcg ggaacggtca gccacgcatt
     3601 gtcggcaagt tcgcgttcga gctgcccttt gctccagctc gaatagccta tgctgatcaa
     3661 ggctttgtca accgcgcctt cgcgtgaaat gttttcaagc acatcgcggg aagaggtcag
     3721 cgcgatgccg tctgaaacgc cgatgctgct ttgccagttg ccgatcggag tgtggacgac
     3781 gtaaccgcgc tcgacctgca ccggcccgcc catcatcacg ctgtcgtgct gcatccgcat
     3841 ggggatgttt ttgccggtgg cggaaaaaat catgtccatc gtaatcggag agggtttgtt
     3901 gatggcgata ccgagtgcgc cgtcttcatc gtgtttgcag atatagacga ccgattgtga
     3961 aaaaaacgcg tcttccatat cgggcatggc gacgagaaag tggttggaca ggttcatatc
     4021 agcgtttgtc gggatttttt atcgggttgg aaataatgca ggcgccggca agcagtttgc
     4081 cggaagtatc ggcttgcacc ccgtcggttt gcggtatgcc gctgccgaaa caggaaaccg
     4141 cgcttaagga atttttcggc gatccttgga cgattttatc gctgtaaacc aaataggcga
     4201 aggctttgcg tttggggtcg taataacgga caatctgccg gctcttgaac gcgaagcccg
     4261 taccgcgctt gaaaacttct ttcggtttgc gcacggcggt ttcgtcaaaa gaaatcgaag
     4321 atgccgtctg aacgcacgaa accgatgcgt cggacgcgtc ctcttccaaa ttgaccattt
     4381 ccttcaagcc gccttttttt gcatacgaaa tataacaggc aaccccttga acgtcgggat
     4441 cgtcgaatcc ttccacttcg atacggtcgt ttttgcccaa catgttgaaa acggtacttg
     4501 cccgtccgat tttatcggtt tcgccgctgc cgcaggcagt cggcaggacg gcggcagaca
     4561 gcagtagcag tctgttcatc aaaatttcct tatcggttga atccccgttt tccggaaggc
     4621 ggcagggttt gctttgtttg gaggggcgca cgctcccaaa tcgggcaaca tacggtacgc
     4681 agcttacatg tgctaccctg tgtgtcggaa cacaatatcc gttgcagcat tgaaaatatg
     4741 ccgcacaata taaggctgtt tgagccgatt gcaagtatcc gcgcaaagaa ggtgcaagat
     4801 tgggcaaacg gcattttcag acggcataac tgacagtata atccgaacat ccggccgctt
     4861 tcgcgcggcc ttcagcatta tccgattttt tctgaaagcc gaaccatgca atacaaaccc
     4921 ctcctgcttg ccctgatgct cgttttttcc acgcccgccg ttgccgccca cgacgcggca
     4981 cacaaccgtt ccgccgaagt gaaaaaacag gcgaagaaca aaaaagaaca gcccgaagcg
     5041 gcggaaggca aaaaagaaaa aggcaaaaat gccgcagtga aagataaaaa aacaggcggc
     5101 aaagaggcgg caaaagagtt caaaaaaacc gccaaaaacc gcaaagaagc agagaaggag
     5161 gcgacatcca ggcagtctgc gcgcaaagga cgcgaagggg ataaggaatc gaaggcggaa
     5221 cacaaaaagg cacatggcaa gcccgtgtcc ggatccaaag aaaaaaacgc aaaaacacag
     5281 cctgaaaaca aacaaggcaa aaaaggggca aaaggacagg gcaatccgcg caagggcggc
     5341 aaggcggaaa aagacactgt ttctgcaaat aaaaaagccc gttccgacaa gaacggcaaa
     5401 gcagtgaaac aggacaaaaa atacagggaa gagaaaaatg ccaaaaccga ttccgacgaa
     5461 ttgaaagccg ccgttgccgc tgccaccaat gatgtcgaaa acaaaaaagc cctgctcaaa
     5521 caaagcgaag gaatgctgct tcatgtcagc aattccctca aacagcttca ggaagagcgt
     5581 atccgccaag aacgtatccg ccaagagcgt atccgtcagg cgcgcggcaa ccttgcttcc
     5641 gtcaaccgca aacagcgcga ggcttgggac aaattccaaa aactcaatac cgagctgaac
     5701 cgtttgaaaa cggaagtcgc cgctacgaaa gcgcagattt cccgtttcgt atcggggaac
     5761 tataaaaaca gccggccgaa tgcggttgcc ctgttcctga aaaacgccga accgggtcag
     5821 aaaaaccgct ttttgcgtta tacgcgttat gtaaacgcct ccaatcggga agttgtcaag
     5881 gatttggaaa aacagcagaa ggctttggcg gtacaagagc agaaaatcaa caatgagctt
     5941 gcccgtttga agaaaattca ggcaaacgtg caatccctgc tgaaaaaaca gggtgtaacc
     6001 gatgcggcgg aacagacgga aagccgcaga cagaatgcca aaatctccaa agatgcccga
     6061 aaactgctgg aacagaaagg gaacgagcag cagctgaaca agctcttgag caatttggag
     6121 aagaaaaagg ccgaacaccg cattcaggat gcggaagcaa aaagaaaatt ggctgaagcc
     6181 agactggcgg cagccgaaaa agccagaaaa gaagcggcgc agcagaaggc tgaagcgcga
     6241 cgtgcggaaa tgtccaacct gaccgccgaa gacaggaaca tccaagcgcc ttcggttatg
     6301 ggtatcggca gtgccgacgg tttcagccgc atgcagggac gtttgaaaaa accggttgac
     6361 ggtgtgccga ccgggctttt cgggcagaac cggagcggcg gcgatgtttg gaaaggcgtg
     6421 ttctattcca ctgcgcctgc aacggttgaa agcattgcgc cgggaacggt aagctatgcg
     6481 gacgagttgg acggctacgg caaagtggtc gtgatcgatc acggcgagaa ctacatcagc
     6541 atctatgccg gtttgagcga aatttccgcc ggcaagggtt atacggtcgc ggcaggaagc
     6601 aaaatcggca cgagcgggtc gctgccggac ggggaagagg ggctttacct gcaaatacgt
     6661 tatcaaggtc aggtgttgaa cccttcgggc tggatacgtt gatcggattg ccgaaacggc
     6721 aggctttatg caaatcgtgc cgatatggtg cgctgttccg tgaagtttgc cgtttgccgt
     6781 acctgtgttt tccggttttt ggaaatcaag agagaaagtt aaagaagaat gtcgaaacct
     6841 gtttttaaga aaatcgcact ttatactttg ggtgcaatca gcggcgtggc cgtaagtctg
     6901 gcggtgcagg gttttgccgc cgagaaggac gggcgggata acgaagtcct gccggtgcaa
     6961 tccatccgta cgatggcgga ggtttacggt cagattaagg caaactacta tcatgacaaa
     7021 cccgatgccg atttgtttga aggtgcgatg aagggtatgg tggccggttt ggatccgcat
     7081 tccgaatata tggataaaaa aggttatgcc gagataaagg agtccaccag cggcgaattt
     7141 ggcggcttgg ggatggaaat cgggcaggaa gacggttttg tcaaagtggt ttcgccgatt
     7201 gaggacacgc ctgccgaacg ggcggaggtg aaaagcggcg atttcattgt gaaaatcgat
     7261 aatgtttcga cgcgcggtat gacggtcagc gaagcggtga aaaaaatgcg gggcaagccg
     7321 ggtacgaaga ttactttgac gctgtcgcgc aaaaatgccg acaagccgat agtcgtcaac
     7381 ctgacccgtg ccattattaa agtgaaaagc gtccgccatc acctgatcga acccgattac
     7441 ggctatatcc gcgtgtcgca gttccaagag cggacggtcg aaagcgtcaa taccgccgca
     7501 aaagagctgg taaaggaaaa taaaggaaaa ccgctcaagg ggctggtgtt ggatttgcgc
     7561 gacgaccccg gcgggctttt gaccggcgcg gtcggcgtgt cggcggcgtt tctgccgtct
     7621 gaagcggtcg tcgtcagcac caagggacgc gacggcaaag acggcatggt actgaaagcc
     7681 gttcccgagg attatgtgta cggtatgggc ggcgaccctt tggcgggtat tcctgccgag
     7741 ttgaaaacga ttccgatgac ggtattggtc aattccggtt cggcttccgc gtcggagatt
     7801 gtcgccggcg cattgcagga ccacaaacgc gcggtcatcg tcggtacgca gagcttcggt
     7861 aaaggttcgg ttcagacttt gattcctttg tccaacggca gcgcggtcaa gttgacgacc
     7921 gccctgtatt acacgccgaa cgaccgttcc attcaggcac aggggattgt tcccgatgtc
     7981 gaagtaaaag ataaggaacg tacttttgaa agccgcgagg cggacctggt cggacacatc
     8041 ggcaatccct tgggcggcga ggatgtgaac agtgaaaccc ttgccgtacc gcttgaaaaa
     8101 gatgcggata agcccgctgc aaaagaaaaa ggtaaaaaga aaaaggacga ggatttgtct
     8161 tcaaggcgga ttccgaaccc tgcgaaagac gatcagttgc gtaaggcttt ggatttggtc
     8221 aagtcgcccg agcagtggca gaagtctttg gggctggcgg cgaaaaaacc ggtttcaaat
     8281 aaagataaaa aagataagaa gtaggttttg acgatgccgt ctgaaaggat ttcagacggc
     8341 atattatgtt tgaaaggaca ggttatgagc gattttttac cggaatttga accgtgcggc
     8401 atttatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca gtacaaatag
     8461 tacggcaagg cgaggtaacg ccggaccggt ttaaatttaa tccactatac ttgggtagcg
     8521 attgggtttc agacggcata cattcaggat ttcaccgcct tataccgtct gaaagacgtt
     8581 tctgacccat ccctactaca cgctttgtcc gcaaacgtat cacaggcaag attatggaag
     8641 ttatccgata cccaaattcc cccttcaaac tccaccaacc cttcccgccc gcaggcgacc
     8701 agcccaccgc cattgcgggc ctgatcgaag ggctttcaga cggccttgcc taccaaaccc
     8761 tgctcggcgt aaccggttcg ggcaaaacct acacgatggc gaacgtcatc gcgcaaagcg
     8821 gcagacccgc catcattatg gcgcacaaca aaacccttgc cgcccagctt tatgccgaaa
     8881 tgcgcgagtt tttccccgaa aacgcagtgg aatatttcgt gtcgtattac gactattacc
     8941 agcccgaagc ctatgtgccc agccgcgatt tgttcatcga aaaagacagc gcgatcaacg
     9001 aacacatcga gcagatgcgc ctttccgcca ccaaaaacct gatgacgcgc gacgacgtga
     9061 ttatcgtcgc caccgtgtcc gccatttacg gtatcggcga cccgaccgag tatcaacaaa
     9121 tggtgctgtc cgtaaaagaa ggcgacacca tcgagcagcg cgacatcatc gccacgctcg
     9181 tttccatgca gtacgaacgc ggcgatttgg acttcaaacg cggcagcttc cgcgtgcgcg
     9241 gcgacgtgat tgacgtgtac cccgccgaaa gctccgaaaa cgccttgcgt atcagcctgt
     9301 ttgatgacga aatcgaccgc ctcgatatgt tcgacccgct ttcaggcagc ctgcaccagc
     9361 gtgtcggacg ctacaccgtc ttcccgtcca gccactacgt taccccgcgc gacaccgtat
     9421 tgcgcgcctg cgaatccatc aaagaagaat tgcgcgaacg catcgaattt ttcgctcgcg
     9481 aacaacgccc cgtcgagcaa caacgcatcg aacagcgcac ccgtttcgac ctcgaaatgc
     9541 tctacgaaat gggcttctgc aaaggcattg aaaactactc ccgccacttc tccggtaaaa
     9601 aagaaggcga accgccgccc acgctgatgg actacctgcc cgacaacgcc atcatgttca
     9661 tcgacgaaag ccacgttacc gttacccaaa tcggcggcat gtacaaaggc gacgcatcgc
     9721 gcaagcaaaa cctcgtggac tacggcttcc gcctgccttc cgcccgcgac aaccgcccgc
     9781 tcaaattcca cgaatttgaa aaagtcatgc cgcaaaccgt cttcgtttcc gccacccccg
     9841 cgaaatacga agaagaacac gccggacaag tcgtcgaaca agtcgtccgc cccacagggc
     9901 tggtcgaccc ccaaatcatc atccgccccg tcgccaccca agtcgacgat ttaatgagcg
     9961 aaatcaacga ccgtattcaa aaaggcgaac gtgtgctcgt taccaccctc accaaacgca
    10021 tggcggagca actcaccgac tattacagcg aactcggcat caaagtgcgc tacctgcaca
    10081 gcgacatcga caccgtcgag cgcgttgaaa tcattagaga tttgcggctc ggcctgtttg
    10141 acgtactcgt tggcatcaac ctgttgcgcg aaggcctcga catccccgaa gtgtccctcg
    10201 tcgccatcct cgatgccgac aaagaaggct tcctgcgctc ccaccgcagc ctgattcaaa
    10261 ccataggccg cgccgcgcgc aacgtgaacg gcgtcgccat cctgtacgcc gacaaaatta
    10321 ccgactccat gaaagccgcc gtcgacgaaa ccgaacgccg ccgcgaaaaa cagattaaat
    10381 tcaacgaaga acacggtatc gtgccgcagc agattaaaaa acaggtcaaa gacatcatcg
    10441 acggcgtgta ccacgaagaa gacagtggca aaggccgtag acaaggcaaa aacaaggtca
    10501 aagtcggcga aatccacaac gaagaagacg cgattaaaga aatcgccaaa ctggaaaaag
    10561 ccatgcagca ggcggctagg gatttacagt ttgaagaagc tgctgtgttg agggatagga
    10621 ttaggaatat taaagagaat ttgttgtttg gggcggagtg attttgaaat agtaatcgca
    10681 gcctgaatac atagcgtgtg cgccactggc gcgcgctcat tgtgttatca ggaatccttg
    10741 aaatcatgta cgcagcttgc atcacacatc ctagctatac ataaacaaca aggccgtctg
    10801 aattttcaga cggccttttc cgtttacaac tttactactt attcaataac tacacgtgca
    10861 ttcagaggct gtacggggcg gttgttttcc gaaccgacgg cgcgggtgaa tttttccgct
    10921 tgcgcttggt cgatgtggtc ataagttttc aacaccaacc atgatacgcc ctctgtgcac
    10981 ggcggcgtgg tcagcgaacc ggcaaagcgg tagtatttca accgtttcgg cagtagggtg
    11041 gatgcgtcga acggttggtt gagtttcact tttcctgcgg tcatcggcat gacgttccag
    11101 atggaagaca ggcggccgtt ggttttgccg gcttcataca gcacggctaa tactaaaggc
    11161 tgtttgtttt cgtctaagtg gacgaagtga gcttccatcg ggaaagtgcg gcctttgatt
    11221 tggttttcgc tcggcacgtg gaagtggaac tgtttcaggg tataggtgcg gccgttcacg
    11281 gtcagggtat tgccgccttc gggataattg acctgaatgg tgtggccgtt gttttccacg
    11341 tcaaccatac tcggtttgta attgactttg atggcgggca gtttgccgga aacggtttcg
    11401 gtaatgttta ccggagattg gtttttgccg gtggagcaca aacggaattc ttctgacaga
    11461 ttgccccagc tttcgggaga gtcgtgtccg gtatagcccc aatgggtgtg attgccgtgt
    11521 gcggcggcgg agaaagcggt acaggccaac agcaggacag cggtcaggcg gggtaaagtg
    11581 cgggggaaac gaggcattgt aagatccttt ctattaagga gtagaaa
//
LOCUS       DAXGCP010000072        11589 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.072, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000072 DAXGCP010000000
VERSION     DAXGCP010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11589
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.072"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..984)
                     /locus_tag="ACFJCW_001645"
     CDS             complement(<1..984)
                     /locus_tag="ACFJCW_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HFC4151741.1"
                     /translation="MNKKYPKINYIGNKEKIASWICDQLPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYSEK
                     FYFHDECQQLDLYRKNIGKLNNQYKRALAFTLMRRAMIRKMPYSRFTIPWEKVKQLRD
                     EEYSYAKYGRRRAYHNESFQSHFLQNLDDYNQAVFNNGWRHHAFNQDIFDLLPNIQAD
                     AVYLDPPYTGTMNNYFGFYGLLDSYITSSIPKPFANHFMDKKQAVELFKRVINHLKPF
                     KYWLLSYNNASYPNRDELEEMLGKNGRNVQILETPHVYKVTGKEKKQSHKEI"
     gene            complement(977..1978)
                     /locus_tag="ACFJCW_001646"
     CDS             complement(977..1978)
                     /locus_tag="ACFJCW_001646"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4151742.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPRHQLLQKDLTTLTEQDLTNCLNGQSVDLVIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGRTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSFPDNFIFCGSKIAQQQQVGNAVPPLLAKAIAESILKMSENE"
     gene            complement(2009..4282)
                     /locus_tag="ACFJCW_001647"
     CDS             complement(2009..4282)
                     /locus_tag="ACFJCW_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HFC4151743.1"
                     /translation="MNITRILSQELSATTVQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRQLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQPQDVEAAAQGYLNENIPDAKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHTQVVEGKETEGEKFSDYFDRREPVRAMPSHRA
                     LAVLRGRNEGVLNIALKYQPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYRNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKQHGVKLIAIGNGTASRETDKIAGELVR
                     GMPESSLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSRLAKSLDAVVEDCVNAVGVDANTASAPLLARISGLNQTLAQN
                     IVAYRDENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGKEPLDASAVHPEAYPVVA
                     KMLAQQGITAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEISDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPTNSAMADAFAKLKR"
     gene            4397..5413
                     /gene="galE"
                     /locus_tag="ACFJCW_001648"
     CDS             4397..5413
                     /gene="galE"
                     /locus_tag="ACFJCW_001648"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HFC4151744.1"
                     /translation="MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRL
                     RQITGRNIPFYQGDIRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVY
                     GSLVLAEEMARAGVLKIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERML
                     TDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGVPNNLLPYICQVASGRLPQLSVF
                     GGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRAF
                     EAASGLHIPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRWVSRNPG
                     RYGD"
     gene            5414..6454
                     /gene="rfbB"
                     /locus_tag="ACFJCW_001649"
     CDS             5414..6454
                     /gene="rfbB"
                     /locus_tag="ACFJCW_001649"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HFC4151745.1"
                     /translation="MQTAGKKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAG
                     NLESLTDIADNPRYAFEQVDICDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEF
                     IRTNIVGTFDLLEAARAYWQQMPSEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSNPYSASKAAADHLVRAWQRTYRLPSIVSNCSNNYGPRQFPEKLIPLMILNALSGKP
                     LPVYGDGAQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKTNLEVIKTICALLE
                     ELAPEKPAGVARYEDLITFVQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQ
                     WYLDNKTRRQNA"
     gene            6559..7425
                     /gene="rfbA"
                     /locus_tag="ACFJCW_001650"
     CDS             6559..7425
                     /gene="rfbA"
                     /locus_tag="ACFJCW_001650"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HFC4151746.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNAAFQRLLGDGSDFGIRLQYAVQPSPDGLAQAFIIGEEFIGNGNV
                     CLILGDNIFYGQSFTQTLKQAAAKTHGATVFGYRVKDPERFGVVEFDENFNALSIEEK
                     PQQPKSDWAVTGLYFHDNRAVEFAKQLKPSARGELEISDLNRMYLEDGSLSVQILGRG
                     FAWLDTGTQESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLTKKDVETRAKPLEKT
                     AYGQYLLRLIGK"
     gene            7564..8121
                     /gene="rfbC"
                     /locus_tag="ACFJCW_001651"
     CDS             7564..8121
                     /gene="rfbC"
                     /locus_tag="ACFJCW_001651"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HFC4151747.1"
                     /translation="MDIIDTALPDVKLLKPQVFTDGRGFFMETFRDGWFKENIADRTF
                     VQENHSNSSKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNRYQLWIPEGFAHGFCVLGDAAEVVYKCTDYYNPETEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(8165..10183)
                     /locus_tag="ACFJCW_001652"
     CDS             complement(8165..10183)
                     /locus_tag="ACFJCW_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HFC4151748.1"
                     /translation="MNKSLSGSVEKYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDDRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLVLLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDMEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVAVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLLADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWAYIFTGIAIGAVLIVVDLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNADRIGTLFAAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(10378..11499)
                     /gene="dnaJ"
                     /locus_tag="ACFJCW_001653"
     CDS             complement(10378..11499)
                     /gene="dnaJ"
                     /locus_tag="ACFJCW_001653"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HFC4151749.1"
                     /translation="MSNQDFYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYEACDVCNGSGAKPGAS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCRGAGKHIKEPCVKCRGVGRNKAVKTVEVN
                     IPAGIDDGQRIRLSAEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLDLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIVVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         2832 a         3190 c         2851 g         2716 t
ORIGIN      
        1 aatttcctta tggctttgct tcttttcttt tcctgtaacc ttataaacgt gaggcgtttc
       61 caagatttgt acatttcgcc catttttacc taacatttct tctaattcat ctcggtttgg
      121 atatgaagca ttgttgtagc ttaacagcca atatttaaat ggtttcaaat gattgattac
      181 ccttttaaat aattcgacag cctgcttttt atccatgaaa tgattggcaa atggtttggg
      241 tatggatgat gtaatgtaac tgtccaataa tccgtaaaag ccaaaataat tgttcatcgt
      301 gcctgtgtaa ggtgggtcta aatagacggc atcagcttgt atattaggta ataaatcaaa
      361 tatatcttga ttaaaggcgt gatgccgcca gccattattg aaaacagctt ggttatagtc
      421 atccaaattt tgcagaaaat gactttgaaa actttcattg tggtaggcgc gtcgacggcc
      481 atatttagca taactgtatt cttcatcacg cagttgttta actttttccc aaggaattgt
      541 gaatcgtgaa tagggcattt tacgtatcat ggcgcgacgc attaaagtaa acgccaaagc
      601 acgtttatac tggttattca gcttccctat atttttacgg tacaaatcaa gttgttggca
      661 ttcatcgtga aaatagaatt tttcggaata acgctgactc ataaaaccgg catgcgggct
      721 gcctgaaaaa atcattgcga catcatcgtc atttaatgtt tcatggttgt tttctattaa
      781 tgctaaagca atttggtaat taattgccaa aatatcgtta gtaatcacac gatagccgcg
      841 ttttttggct tcgtaggcaa aggaacagcc tccactaaat acatctgcaa ctgtatctac
      901 atcagacgga agctggtcac aaatccagga agctattttc tctttattac cgatatagtt
      961 aattttcgga tatttcttat tcattttcac tcatttttaa aatactttca gcaatagctt
     1021 ttgccaataa aggcggcacg gcgttaccaa cctgctgctg ctgggcaatt ttgctgccgc
     1081 aaaaaataaa attatcaggg aaagattgta aggcagctaa ttcacgaacg gttaaagccc
     1141 gattctgttc atagtgaaaa actttgcgca tatctcctgt aatacaaacg gctggtttgt
     1201 tgctgttgta acggatgtat ttacggatat cacctgtttt cggacgtaat ggttcaggaa
     1261 tatcgttacg gttacctcca tttttaacaa atgccatttt ttctaacatt tgtgccgaat
     1321 gattcatagc ttcatgattt gcaacgtgtg gattgctttc gccagcagcc agttttggaa
     1381 aatgtcctat tgctgatcca acagtctgat gggaaatctg caaaggttcg ggaaaggaaa
     1441 ttttgccttt atccctcctc ccgataaata tcactcggct acgtatctga gggacaccga
     1501 aatcggctgc actcagtatc ttacattcca ccgaataacc gatattctga aatgcttgaa
     1561 taatctcaat acgtgttcta cctgaattgt gtgtatagag tcgcgctaca ttttccataa
     1621 caaaaaaata tggttggaca attttaacta ttcggacaaa ctctttaaat aaatggttgc
     1681 gtgggtcatc tgtaaatgtc cgtccaatct ttcctgccat actaaaacct tgacaaggtg
     1741 gtcctccaat aaccaaatca actgattgtc cgttaagaca attggttaaa tcttgttcgg
     1801 ttagtgtggt taaatctttt tgcagtaatt gatgacgggg gaagttggta cggtaagtct
     1861 gacaataatc agactccatt tcaacagaaa gcaattgttg gaatccggct tgttcaaaac
     1921 ccaaggatag gcctcctgct cctgagaaaa ggtcaatata ggtaagtggt gtgtgcataa
     1981 gtcaaaatcc ataaactctt cgattatttt accgcttcag cttcgcaaac gcatccgcca
     2041 tcgccgaatt ggtcggggcg cggtcgttgc gttggggttt gcggccggct gtccgttcgc
     2101 ggctgcggtt ttcagacggc attttatgtt ttgcgccgcc cggttcgtca tccaagcgca
     2161 tggtcagcgc gatgcgtttg cgtgcggcat cgacttccag cactttcact ttcaccacgt
     2221 cgccggcttt caccacttcg cgcgggtctt ggacgaactt attagacagg gcggagatgt
     2281 gcaccaagcc gtcctgatgg acgccgatgt ccacgaacgc gccgaagttg gcgacgttgg
     2341 agaccacgcc ctcgagtatc atgccgactt gcaagtcgct gatttcgtgg atgccttcgg
     2401 caaacgatgc cgtctgaaac gcaccgcgcg ggtcgcggcc gggtttttcc agctcggaca
     2461 ggatgtccaa aatagtcggc agaccgaagc gttcgtcggt gaagtcggat gctttgattt
     2521 gcttcacacg ctcgcggttg ccgatgagtt cggcggcggt aatgccttgt tgcgccagca
     2581 ttttggcgac gacgggatag gcttcggggt ggacggcgct cgcgtccagc ggctctttgc
     2641 cgccgttaat ccgcaaaaag cctgctgctt gctcgaaggt tttttcgccc aagcgcggta
     2701 cttttagcaa tttttttcgg ctgtcgaacg cgccgttttc atcacggtag gcgacgatgt
     2761 tttgggcaag ggtttgattc aagccggaaa tccgcgccaa gagcggggcg gaggcggtgt
     2821 tcgcgtccac gccgacggcg ttcacgcagt cttcgaccac cgcgtccagc gatttggcga
     2881 gccggctttg gttcacgtcg tgctgatact gccccacgcc gatggatttg gggtcgattt
     2941 tgaccaactc ggcaagcggg tcttgcagcc tgcgggcgat ggacactgcg ccgcgcaggg
     3001 aaacatctaa gtcgggaaac tcgcgcgccg ccagttcgga cgcagaataa atcgacgcgc
     3061 cggcttcgga aacgacgatt ttgtgcaggc tgctttcggg cattccgcgc accagttcgc
     3121 ccgcgatttt gtcggtttcg cggctggcgg tgccgttgcc gatggcgatg agcttcacac
     3181 cgtgttgttt aatcaggcgc gacaacgttg ccaacatatt gttttcttga tgcaaataga
     3241 caatgaccgt atccagcagt ttgcccgtgt cgtccaccac ggcgcatttc acgccgttgc
     3301 ggtagccggg gtcgagtccc aaagtggtca gccgcccggc gggcgcggcg agcagcaagt
     3361 ctttgagatt gcgggcgaac acggtaatcg cgtcagtgtc ggcagcttct ttcaaacgat
     3421 tgagagcttc gagttccagc gacaaaaaga ttttcgcgcg ccaagtcagg cgcacggtgt
     3481 cgcgcagcca tttgtggccg tctgaaacct tgaagcggcg ggcgatgatt tgctcgtatt
     3541 cgctttgctg cgtaatcggc gtgtcgtcgg gctggtattt gagcgcgatg ttcaacacgc
     3601 cttcgttgcg accgcgcaaa accgccagcg cgcggtggct gggcatggcg cgcacgggtt
     3661 cgcggcggtc gaaataatcg ctgaattttt cgccttcggt ttctttgcct tcaacgactt
     3721 gcgtgtggat ttcggcttcg ttccacagct tgtcgcgcag cgtgccgatg agttccgcgt
     3781 cttcggcaaa ctgctccatc agaatcgcgc gcgcgccatc cagcgcggct ttggcgtcgg
     3841 ggatgttttc gttcaggtag ccttgcgcgg cggcttccac gtcctgcggc tgttcggcaa
     3901 gcaacacgtc cgccagcggc tgcaaaccgt gttcgcgagc gatttgcgct ttggtgcggc
     3961 gtttgggctt gtagggcaga tacaggtctt ccagcgcggt tttgttgtcg gcggcttcga
     4021 tttgcgccct gaggtcgtct gaaagcttgc cttgctcttc aatgcttttt aacacaacgg
     4081 ccttgcgctc ttccaactcg cgcaggtatt gcagccgctc ggcaagctgg cgcagctgcg
     4141 tatcgtccag cccgcccgtg gcttctttac ggtaacgcgc gataaagggg acggtcgcgc
     4201 cgtcgtccaa aagctcgata gcggcattga tttgcacggt agtggcggag agttcttggg
     4261 agaggattcg ggtaatgttc ataaattgcc tccgtgatgc cgtctgaaca gccgacggcg
     4321 caatgtgggt aatcgtttgg aaaagatgaa gataatactg atatactttg cccgatacaa
     4381 tctgaaagga atgtttatga ccgtcctgat taccggcggc accggcttta tcggttcgca
     4441 caccgccgtc tcgctcgtcc aatccggtta cgatgccgtg attttggata atctgtgcaa
     4501 ctcgtctgcc gccgtcctcc cgcgccttcg gcaaattacc ggcagaaaca taccgtttta
     4561 tcagggcgac atccgcgact gtcagatttt gaggcagatt ttttcagaac atgaaatcga
     4621 atccgtcatc cattttgccg gtttgaaggc agtgggggaa agcgttgccg agccgacaaa
     4681 atattacggc aacaatgttt acggcagcct ggtgctggcg gaagaaatgg cgcgcgcggg
     4741 cgtgttgaaa atcgtattca gctcgtcggc aaccgtttac ggcgatgcgg aaaaagtccc
     4801 ctatacggaa gatatgcgcc cgggcgatac cgctaatcct tacggtgcgt ccaaagcgat
     4861 ggtggagcgg atgttaaccg acatccaaaa agccgatccg cgttggagcg tgattttgtt
     4921 gcgctatttc aacccgatcg gcgcgcacga aagcggactt atcggcgaac agcccaacgg
     4981 cgttcccaac aatcttttgc cctatatctg tcaagtggct tcgggcaggc tgccgcaact
     5041 gtcggtattc ggcggcgact atccgacccc cgacggtacg ggaatgcgcg actacatcca
     5101 tgtgatggat ttggcagaag ggcatatcgc ggcaatgaag gcgaaaggcg gcgttgccgg
     5161 cgtacatttg ttcaacttgg gttcgggacg cgcctattcc gttttggaaa tcatccgcgc
     5221 ctttgaggcc gcatccggtt tgcacattcc ttaccgaatc caaccccgcc gcgccggcga
     5281 cttggcgtgt tcctatgccg acccgtccca taccaaacaa caaaccggct gggaaaccaa
     5341 acgcggcttg cagcaaatga tggaagattc gtggcgttgg gtcagccgca accccggcag
     5401 atatggggat taaatgcaaa ccgcaggcaa aaaaaacatc ctcgttaccg gcggcgcggg
     5461 ttttatcggc tcggcagtcg tccgccatat tatccaaaac acccgagatt ccgtcgtcaa
     5521 cctcgacaag ttaacctacg cgggcaatct cgaatcgctg accgacattg ccgataatcc
     5581 ccgctacgct tttgagcaag tggatatttg cgaccgcgcc gaactcgacc gcgtgttcgc
     5641 gcaataccgg cccgatgccg tgatgcactt ggcggcggaa agccacgtcg accgcgccat
     5701 cggttcggca ggcgaattta tccgaaccaa tatcgtcggc acattcgacc tgctggaagc
     5761 tgcgcgcgcc tattggcagc aaatgccgtc tgaaaaacgc gaagccttcc gtttccacca
     5821 tatttctacc gatgaagtct atggcgattt gcacggcaca gacgatttgt ttacagaaac
     5881 cacgccatac gcgccgtcca acccctactc cgcctccaaa gccgccgccg accaccttgt
     5941 ccgcgcgtgg cagcggactt acaggctgcc ctccattgtc agcaactgtt ccaataatta
     6001 cggcccccga caattccccg aaaaactcat tcctttgatg attctgaacg cactttccgg
     6061 caaaccactg cctgtgtacg gcgacggggc gcaaatccgc gactggctgt ttgtcgaaga
     6121 ccacgcgcgc gcgctgtatc aggtcgttac cgaaggtgtt gtcggcgaaa cctacaatat
     6181 cggcggacac aatgaaaaaa ccaatctcga agtgatcaaa accatctgcg ccctcttgga
     6241 agaactcgcc cccgaaaaac cggccggcgt ggcacggtat gaagatttaa ttactttcgt
     6301 acaagaccgc cccggccatg atgcccgcta cgccgtcgat gcggcgaaaa tcaggcggga
     6361 tttgggctgg ctgcctttgg aaacttttga atccggcctc cgcaaaaccg tgcaatggta
     6421 tttggacaac aaaacccggc ggcaaaacgc ataaaacggc aactgccgtt cggaacgctt
     6481 aggtacgggc aaatagtttt cagacggcat cccgacgcaa tgccgtctga aaacccatcg
     6541 caaaggaaga aagaaaagat gaaaggcatc atactggcag gcggcagcgg tacgcgccta
     6601 tatccgatta cgcgcggcgt atccaaacaa ctgctgcccg tgtacgacaa accgatgatt
     6661 tattacccct tgtcggtttt gatgctggcg ggaatccgcg atattttggt aattaccgca
     6721 cccgaagaca acgctgcctt ccaacggcta ctcggcgacg gctccgactt cggcatccgc
     6781 ctgcaatatg ccgttcaacc cagccccgac ggcttggcgc aggcatttat catcggcgaa
     6841 gaatttatcg gcaacggcaa tgtctgcctg attttgggcg acaatatttt ctacggtcaa
     6901 tcatttacgc aaacattgaa acaggccgcc gccaagaccc acggcgcaac cgtattcggt
     6961 tatcgggtta aagaccccga gcgtttcggc gtggttgaat ttgacgaaaa cttcaacgcc
     7021 ttatccatcg aagagaaacc gcaacagccc aaatccgatt gggcggtaac cggcttgtac
     7081 ttccacgaca accgcgccgt cgagttcgcc aaacagctca aaccgtccgc acgcggcgaa
     7141 ttggaaattt ccgacctcaa ccggatgtat ctggaagacg gctcgctgtc cgttcaaata
     7201 ttgggacgcg gtttcgcgtg gttggacacc ggcacgcaag aaagcctgca cgaggcggct
     7261 tccttcgtcc aaaccgtgca aaatatccaa aacctgcaca tcgcctgcct cgaagaaatc
     7321 gcctggcgta acggctggct gacgaaaaaa gatgtggaaa cacgggcaaa gcctttggaa
     7381 aaaaccgcct acgggcaata cctgctgcgc ctgatcggca aataaatacc gtctgaacgc
     7441 cccgacggct ttcagacggc atccaaaccg tgccgcgccg ccaccttaac cgacctgccg
     7501 cacggcgcgc ataaaaaatc aaaccgcaaa aaaacagcgg taacgatacc gccaaaggac
     7561 tttatggaca tcatcgacac cgccctcccc gacgtaaaac ttttaaaacc gcaagtcttc
     7621 acagacgggc gcggtttttt tatggaaaca ttccgcgacg gatggttcaa agaaaatatt
     7681 gccgatcgaa ctttcgtgca agaaaaccac tccaactcca gcaaaggcgt attgcgcggc
     7741 ctgcactacc aaaccgaaaa cacccaaggc aaactcgtac gcgtagttgt cggcgaagtg
     7801 ttcgacgtgg ccgtcgatat gcgcgaaggt tcgccgactt tcggcaaatg ggcgggcgca
     7861 accttgtcgg cgcaaaaccg ataccagctt tggatacccg aaggcttcgc acacggtttt
     7921 tgcgttttgg gcgacgcggc ggaagtcgtg tacaaatgca cggactatta caaccctgaa
     7981 accgaacagg ttttaatatg gaacgacccg gcaatcggca taggctggcc gcttcaaacc
     8041 gcgccgctgc tttcgcccaa agaccttgcc ggcaaaacgt gggcacaagc cgaaaagctc
     8101 cgccttacgc tttcccgata aaaaatgccg tccgaacgtt tcagacggca ttttctccga
     8161 caggctacct acccgccttc agtacgcgct gtgcaaagaa aaacatcccg gtaacgaaga
     8221 acgccaagcc caaccaagaa gcggcggcat cccagttttg cagattcaac gcgagcggcg
     8281 catccgagcc gccgttggtc acagagaagg caataataaa cgccataatt acaccaatca
     8341 ggctttcacc gacaatcagg cctgccgcga aaagcgtacc gatacggtcg gcgtttttca
     8401 gacggccttc gcggttttcc gccttcttgc caatgatgtg tttcaacacc gccgccaaca
     8461 ccgcgcctgc cacgatgggc atattgacgg acggcggcag ataaatgccc ataccgaccg
     8521 caaggacggg cagggcaagt ttaccgcctg atgatttttt caacaccaaa tcgacgacga
     8581 ttaataccgc tccaatcgcg ataccggtaa agatgtacgc ccattcgagg ttgtgggcga
     8641 aaatgcccga cgcaatggtc gtcatcaaag tcgcttgagg ggctgccaaa gcctgcgccg
     8701 catccatgcc ttcgcgcggc attgcgccgg taaagccgta ggcttcgtaa agcagttcca
     8761 acacgggcga aataaccagc gcaccaacga tacagccgat aatcagggcg acttgctgcc
     8821 gccaaggcgt agctttgagc aggtagccgg ttttcaagtc ttgcaggttg tcgttggaaa
     8881 tcgaagccac gcagattact gccgatccgc aaaaaagcgt caacgccagt aagaatttgc
     8941 ggttggcctc atccgccaac aaacctccgg attcgcctac cagcagcaaa accagtgaaa
     9001 taacgacgat ggacacgatg cccacgccgg aaatcgggct ggaagacgag ccgaccaaac
     9061 ctgccatata accgcaggcg gcggcgacca aaaagccgat gacggaagcc aaaagcgtgc
     9121 aaaccgccac caaaagccac gccatgccgc ccgtaatgtg cgaatcgccg ataaagtggt
     9181 aaaacgacac gcctagaata aacatcatag acaacaccca gaaaatcatg gctttaggcg
     9241 acaaatcctg ttcggcgcgt tctgtagcgg gcgcaccgcc gccaaaactc ttgaacgaca
     9301 tcttcatgcc ttccaccatt ggcttgagca gcatcaaaag cgtccaaacc gccgcgatac
     9361 ctatggttcc cgcaccgata aaacgcactt tttccttcca cagcttcatc gcaaacgccg
     9421 ccatttccat atcggaaggt tgcggaatgt gtgaggagaa atacggcacg gcaatacccc
     9481 aagcaatcga aatgcccagc aggatggcga tgccgcccgt cagtccgacc aaataacccg
     9541 cgcccaacaa gaccagtgaa aagcccatcg gcagttggaa aattgccgta ccgcttttaa
     9601 accaataact cgcgctatcg gcaatcacac gcagacctcc ggcgcaaaag ctcatcaatc
     9661 ccgccaacgc gccgccggcc gccagctctt tgataccgct gccgccctga cggtcatccc
     9721 cttcttcatg accgcccact ttcaaaattt cagcagccgc cacaccttcc ggataaggca
     9781 aatcgctttt caccaccatc gcgtaacgca gcggaatggt gaaaatcacc cccaaaatcc
     9841 cgccggcaat acataaaagc gtcgtctgcc aaaacgggaa accgctccag tagcccgcca
     9901 tcagcaaacc gggcaggacg aagatgatgg ttgaaagcgt acccgcagcc gaggcttggg
     9961 tctgcaccat gttgttttcc aaaatattgc tgcctttgaa aaattttaaa accgccatcg
    10021 aaatcaccgc cgccggaatc gacgaggcaa aggtcagccc gactttcaaa ccgaggtaaa
    10081 cgttagacgc agtaaaaatt acagtgatca atgcgccgag tatcatgcct cggagcgtca
    10141 gttcgcggta tttttctacc gaaccggata aagatttatt cattattctt cctttgacaa
    10201 cagacgttca catattgttg gcatcacgcc atgatgtcaa gttttaaaaa gaacagttaa
    10261 aaacaattat cccaccctgc ccatacccaa ttgaaaataa aaactatttc caaacgaaca
    10321 aaaacagccg tatcagggag gttccccgat acggctgctt gtttccgaac cttaaaatca
    10381 atcaaacaaa tcgcgcagct tgtctaaaaa cgatttcttg cgcggcgttt ggttttccaa
    10441 gcccgtagaa atccgctcaa attcttccaa aagctctttt tgacggtcgg tcaaattgac
    10501 aggcgtttcg acaacaatat ggcagtacaa atcgccggtc gcgctgctgc gtaaagattt
    10561 gacaccctta cctttcacgc gcatcctcct gccggtttgg gtttctttgg ggacggtgag
    10621 cttgactttg ccgtccaagg tcggcacttc taactccccg cccaaagcag ccgtggcaaa
    10681 actaatcggc agttcgcaat gcaaatccaa accatcgcgt tggaaaatct tatgcgcccg
    10741 aatgcggacg gttacataca ggtcgccggc aggcgcgccg tgcatacccg gcccgccttc
    10801 agcgctcaaa cggatacgct gcccgtcatc gataccggcg ggaatattga cttccaccgt
    10861 cttgaccgcc ttattccgcc ccacgccacg gcatttgacg caaggttctt taatatgttt
    10921 gcccgcaccg cggcaggtcg gacaagtctg ctgcatacgg aaaatcgcct gctggatgtg
    10981 caccgtaccc gaacctttgc aagtcgggca ggtttccggg gatgcccccg gtttcgcgcc
    11041 gctgccgttg cagacatcac acgcttcata agtcggaata ttgatgcgtt tcttcacacc
    11101 ttttgcggct tcttcaagcg tgatttcgat accgacctgc acgtcctcac cctgataatc
    11161 aggctgggcg cgccccgaac cacctccaaa catttggctg aaaatatccc caaagtcaaa
    11221 accctgcgca ccgccaaatc cgccaaaccc tccgaagccc ccctgtccgc cgccttcaaa
    11281 cgccgcatga ccatactggt cgtacatggc acgcttttcc ttgtcggaca aagtttcata
    11341 cgccttttgt acttctttaa acttctcttc cgcctcttta ttgtcaggat tgcggtcggg
    11401 atggtatttc atcgccaatt tacggtaggc ttttttaatc tcatcatcgg tagctgctct
    11461 tgccacaccc agcgtcgcat aaaaatcttg attactcatt ttttcatcta aaaataaaat
    11521 cacggcttaa aatgagggca attgcgcaaa acacaagaca aacagactga gacctttgca
    11581 aaattcccc
//
LOCUS       DAXGCP010000073        11499 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.073, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000073 DAXGCP010000000
VERSION     DAXGCP010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11499)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11499)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11499
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.073"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            316..483
                     /locus_tag="ACFJCW_001654"
     CDS             316..483
                     /locus_tag="ACFJCW_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151750.1"
                     /translation="MVNEKLAENRKRYEQKRVIKKVSFNAETEKELLEYAQNLDFSQW
                     VKSIIKEKIKK"
     gene            643..1494
                     /locus_tag="ACFJCW_001655"
     CDS             643..1494
                     /locus_tag="ACFJCW_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC4151751.1"
                     /translation="MNAVQVLNFQQNSVRTVADNKGELWFLANDVCEILGYTNPRRTV
                     DLHCKSRGVTKRYTPTASGEQEMTYINEPNLYRLIIKSRKPAAEAFEEWVMETVLPAI
                     RKTGGCQVGPKTTADDRTGLRRAVAALAGRKGIDYSSAYSMVHQRFNVESVEDLPAGK
                     LPEAVAYVHALTLHTGLTGEVLDREPLPAPQPALPISGNALADIAAMVYYGTRMIESG
                     KDVSAPLKQLGCRQAVTMWTVWHETRSILKRSAAALEVLRGYADKDASDRIAACLEGI
                     YSKATVR"
     gene            complement(1531..1680)
                     /locus_tag="ACFJCW_001656"
     CDS             complement(1531..1680)
                     /locus_tag="ACFJCW_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151752.1"
                     /translation="MSAEEFCRKQIAYWLNESRKASDNADLKAFEFAGREPADYREML
                     KRYAA"
     gene            complement(1683..2357)
                     /locus_tag="ACFJCW_001657"
     CDS             complement(1683..2357)
                     /locus_tag="ACFJCW_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151753.1"
                     /translation="MNLKALIARFRVLANDKAEPYFWSDEEVSGWLNDAVHEACLRGR
                     LLHSDDAFVTDVEKGRPLYAYAAWGFAAGYAYEIDSIRFVSDGKPVCLKLVSPEAADV
                     CAPGWRDGAQTGLPVYAVQGDGKLTLAPAPDRDGRLFAGGYCLPRDMAGDGDEPEINS
                     IHHRNLVYWALAEAFSIPDAETFDPQRSESARRRFELYFGLPADSDLRRITREDAPHL
                     NRHFWI"
     gene            complement(2354..2839)
                     /locus_tag="ACFJCW_001658"
     CDS             complement(2354..2839)
                     /locus_tag="ACFJCW_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151754.1"
                     /translation="MKRRPGICLCGVAVFDNAVRTAAGGWMDKVFIKYIGGRAVWRDR
                     IYHTGLVFEDGQVREVSAGAAAKLLRHGDVFAAVPGKRVEKADDTEALEKAGASQAER
                     EAAAFDAVQDVILQINRMGKDELELYAKANYGQGLDKRKSAENLRGDVVRMVRQFGIV
                     Q"
     gene            complement(2845..3318)
                     /locus_tag="ACFJCW_001659"
     CDS             complement(2845..3318)
                     /locus_tag="ACFJCW_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151755.1"
                     /translation="MARIHVRNNGGNRFGGVPYGNMAAEHYRIVAKQDGAILGADASE
                     PPKAGDVLALGVLEQGFRLDDAQIIVKTAMSSGITADVGFAYADGADDADVPQDAAYF
                     ASGADFASAGRIRCQSAKLVTLPKQALLTVTLKGAGNKKAADIDILIYGEKFGQL"
     gene            complement(3376..4671)
                     /locus_tag="ACFJCW_001660"
     CDS             complement(3376..4671)
                     /locus_tag="ACFJCW_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4043 family protein"
                     /protein_id="HFC4151756.1"
                     /translation="MAQKTNTAYGDPQAMMKQAAGLFAMHMQRNSTLNRLAGKMPAGT
                     AGAEATLRKQTTQHMPVVRCQDLTRGMGDEIRFNLVNPVSALPIMGDNTAEGRGVGMS
                     LSEAGLRVNQARFPVDGGGTMTNQRSPADYRALIRPAAQSLMDRYADQTLLVHMAGAR
                     GFHDNIEWGVPLAGDPKFNDYAVNPVKAPSKNRHFTASGDAVTGVAANGGELKIASTD
                     LFTMDTVDSMRTVLDQIPLPPPIVKFEGDKAAGDSPLRVWLLSPAQYNRFAADPKFRQ
                     LQASAIARASQANQNPLFLGDAGLWNGFILVKMPRPIRFYAGDEMKYCADKFSEAESG
                     LKIPASFADKFAVDRSVILGGQAVLEAFANTGKHGGMPFFWSEKELDHGNRVETLVGT
                     IRGVAKTRFAVDVGGGAKEITDYGVTVVDTVVPLHGGIR"
     gene            complement(4692..>11499)
                     /locus_tag="ACFJCW_001661"
     CDS             complement(4692..>11499)
                     /locus_tag="ACFJCW_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PLxRFG domain-containing protein"
                     /protein_id="HFC4151757.1"
                     /translation="APEGAQALRAAADGGAEQGGAGFDTAHHDQSHPALRQFADRTKQ
                     EEAGRFFSGPADRNTPRAEELARGMEKQPDVSGIPSEDGAEFSDTGVMPDGLARQYAD
                     MAAKYRAKPSEAVGINPDDGAVSAAAALAADSGAAVPSAVSDDMETPPVADDAPSGRS
                     ADADRGGVPSAYGNVRSGGAPRGAASVAPGGSAAAASGGIARVSPLPAGQYFDGLDTR
                     GRKALAKEAGLDIKGVADFGQIAAPVRRKIEQAYHARIEADYQAASEAKQGYLPPPVR
                     MADAVPVPKKGFSVPADALDKESRRRFDALPEWVRRHAQTVADYTADGIMRREAGMAD
                     MRGHYPEGLAESAGAVRAYRAQHPESADVLDRLNRAVYGYRRNNGWSVPLLSREGERL
                     QGVRTALPDDGASEAVVGGGRGLTRALPTEDKGLAQDVRQDVRQGLTQGGRGLTPDAG
                     ADANAAALQGLPGSAVASGNAPARRQNLQVRARAEGAAPGLSASENLAGTDGGKRAPV
                     AGKRPDTVLPVLNPQVAESAGRVSPKKRMADAAADFTRRLAADRRRPEKAGVPLGGGE
                     YRFEHTDRRHIDALAGVPGRPGKGGMPEEFADMAGPSNSDGLVSDGRRYLKGREAETL
                     RAGGLSEAVPSEPGRDYRPTQEARAPAKVMARPRDAASAGKPAGRAQPARAKDAPVAG
                     KAAAAKNAATEKPSSDKVRNIEAGKSHFDGGKGKSAAAQGAATEKPSSDKAAEPETFA
                     KTALDNPEEARRKARVLQGGPVYTVKGRQAPQGFKALREHAENIKKRLAESIGGLAER
                     VDVAAVSETAPDKAQMLLSQRVEGWFDGRTGKITLVAENLTPERAVWAAWHELGHRGF
                     AADGFAKYRAQLERADGNGLIRRIADAVQEGREGTGDAAASVRPAAVEEAVAELYAAQ
                     RTGGWAGIENRYGVKVGNGLKRGIAGVLARIGALLRRVLQRLAGKAGGAMSDADVFAM
                     LADLHGNVEGARDAPWGGNHRAVMFARAEDGAAERSKSESLEKLRRAETIRISGREVP
                     EGGNLREYKRNALEYGKSLRGPYVNKDTGREISLGRAGITEVLHHDVGNPEHLQSIAA
                     IPQIIEKSIYIDTLPNEDKAKNPDIREYEYYVAGLNIGGADYTVKAAIAVATTGDKYY
                     DHKLTGIEKGDLLEMTSRLSSAEISNQSPLSGIDDKRLLQILQDKDAGKGGIADFDTE
                     AVRFSRAANIGAAIGRITGKKSDLRNALKDRWDASKGIQLQFLGRRQIEDIYGGVLDG
                     LKEYGRLSELFGADANKAVTEADKVVREWGRLKEEDAKALADLMHDATLAKVDADPLM
                     RKDAQKRLDGIRTALDIADGKIAKAEAAVASAGARTARADAAYNKAQRAADKAAYALE
                     KAQEKHGREILADEADMRLRRLFYADSEAKRALRRAGADAAAESRAKTDAVRMLEQAR
                     ADVKRLEKDEVGAQKALEGLALLNRRFAGLPDAAQRVYRKARDDYRAHFGQVRDALAE
                     RLARAGQDAETVRRLKERFDNELGGVYFPLARFGDYLVVVKDADGNSANVSRAETLSE
                     AEKLRDALKADFGPGFKVSPVMKSRDYIRSRDAVGSGFMKELGEAVGMLDLDPAQRAR
                     LNDTLTQLYLNSLPDTSWAKHGIHRKGVPGFSDDARRAYAQNMGSGANYLAKLRYADR
                     MAEQLDVMQDFVDGRKYEEGFDQRQLQRVADEMRKRHEAVMNPNPSKLAQALTGFGFL
                     WMMGMSPASAVVNLSQTAMVAYPVMAAKWGYAGAARELLRASKQIGLRFGEKFNTIED
                     SLNGDEKAAFRKAADYGVIDLSQAHDLAGVANGDPGLAGSAWQKVMDKAAWLFHHAEK
                     FNRQVTFVAAYRLAKRAGADSDAAFEQAKKATYDGHFDYAAQNRPRFMMGNAAKVVFL
                     FKQYSQNILYALGRNAYLAFKGDKEARKTLAGLLVSHAMASGILGLPFVSTLLAVASM
                     LGSDDDDPWDAEAALRNMLADAFGDKAGEVLAKGFSRLTPLDVSGRLGLDQLVFPDIQ
                     DGLEGKKWAESLVVGSTGAVVGAGIGAADGGADKVIQAKDGKHTIPYEKLVEAREAEK
                     SAKAEAQALRERIAQLEKGAEKPGVETADGSDNSLFGDFSDEDVKKGVEKLIQEKLAG
                     YEADMKRQEAAKAHYREIYTAHPDADSIVESRELEEWLDAQNPLVRKAFNDALKDGTA
                     AEVIGAFDMFKAAKSAAEPEKPAEKPPAGKNTPNTLSDIPAGRDHTASDGPPDYLSGN
                     ALAEKLASMTEEQVEKFLNS"
BASE COUNT         2430 a         4080 c         2745 g         2244 t
ORIGIN      
        1 ttctttatgc cgtccgaagg gctttcggac ggcatttttc tttgattttg ttgggggaat
       61 ggttgacttt gaacgtgtcc acgtttataa ttcaattcat cggcgcatcg ggtgccgata
      121 cgggaagagc cccaccgaag cggggcttgt acagggagta ggaaaatgaa gctcatcctt
      181 caaattctca tcctggtttt aatcttgatg ctggcaggcg atacgcctat tagcggataa
      241 aaccggctgg ggcggtagcc gccgccccag tccctatctt acaaaaggca gttcaaaaaa
      301 tcaaggagtt tgcctatggt taatgaaaaa ctggcagaaa accgaaagcg ttacgagcaa
      361 aaacgagtca ttaaaaaagt ctcgtttaat gcggaaacag aaaaagagct tttggaatat
      421 gcccaaaatc tcgatttttc ccaatgggtt aaatcaatca taaaagaaaa aatcaaaaag
      481 taattgactt tgaacgtgtc cacgtttatt attcttacaa cggcacagcc gttaatggaa
      541 aaccgaacca agcgggaact tggttcggtt aagtgaaaag cagttctagg aaaactcttt
      601 tcgcgtcttt taaataacct ctaaaagaaa gactattcta tcatgaatgc tgtccaagtt
      661 ttaaactttc aacaaaactc cgtccgtact gttgccgata acaaaggcga gttgtggttt
      721 ttggcaaacg atgtttgcga gattttaggc tacaccaacc ctcgccgaac ggttgacctg
      781 cactgcaaaa gcaggggcgt aacaaaacgg tacaccccca ccgccagcgg cgaacaggag
      841 atgacctata ttaacgagcc gaatctctac cgcttgatta tcaaatcccg caagcctgcc
      901 gcagaagcgt ttgaagaatg ggtaatggaa accgtcctgc ccgccatccg caaaacaggc
      961 ggctgccaag tcggaccaaa aaccaccgcc gacgaccgta ccggattgcg ccgggccgtt
     1021 gccgcgcttg ccgggcgcaa aggcatagac tactcctccg cgtacagtat ggtacatcaa
     1081 cgcttcaacg tcgaatccgt cgaagacctc cctgccggga agctgcccga agccgtcgcc
     1141 tacgtccacg cattgacact gcacacgggc ttgacgggcg aagtccttga ccgcgaaccg
     1201 ttacccgcgc cgcaacccgc cctgcccata agcggcaacg ctttggccga cattgccgct
     1261 atggtttatt acggcacacg gatgattgaa tcgggcaaag acgtttccgc accgctgaag
     1321 cagctcggct gcaggcaggc ggttacgatg tggacggttt ggcacgaaac ccgttcaatc
     1381 ctgaaaagat ccgccgcggc cctcgaagtg ttgcggggat atgcggacaa agacgcctcc
     1441 gaccgcatag ccgcatgtct tgaaggcatt tacagcaagg ctacggtaag gtaaacggaa
     1501 aatgccgccc gaatcttcgg acggcatttt tcacgcggca tagcgtttca acatttcccg
     1561 ataatccgcc ggttcccgtc cggcgaactc aaaggccttc aaatcggcgt tatctgatgc
     1621 cttgcggctc tcgttcagcc aataggcgat ctgtttcctg caaaactctt cagcactcat
     1681 cgtcaaatcc aaaaatgcct gttcaggtgc ggcgcatcct cacgcgtgat acggcgcaaa
     1741 tcactgtcgg ccggcaggcc gaaatacagc tcgaaacgcc tccttgccga ttccgaacgc
     1801 tgcgggtcga aagtctccgc atccgggata ctgaaagcct ccgccaaagc ccaataaacc
     1861 aaattccgat gatgtatgga attgatttcc ggctcgtccc cgtcccccgc catatcccgc
     1921 ggcaggcaat accccccggc aaacaacctg ccgtcacggt ccggcgcagg cgcaagcgtc
     1981 agcttcccgt cgccctgcac cgcataaacc ggcagccccg tttgcgcccc gtcgcgccaa
     2041 cccggggcgc aaacatccgc cgcctccggc gaaaccaact tcaggcacac cggcttgccg
     2101 tcggacacaa aacggatact gtcgatttca tacgcataac ccgccgcaaa cccccatgcc
     2161 gcataagcat aaagcggccg ccctttttcc acatccgtta caaacgcatc gtccgaatgc
     2221 agcagccggc cgcgcaggca cgcctcgtga accgcatcgt tcaaccatcc cgacacctct
     2281 tcgtcgctcc aaaaatacgg ctcggcctta tcattggcaa gcacgcggaa acgcgcaatc
     2341 aaagccttca aattcattgc acgataccga actgacgaac catccgaacc acgtccccgc
     2401 gcaaattctc cgccgatttg cgcttatcca aaccctggcc gtaattcgcc ttcgcataca
     2461 gttcaagctc gtccttgccc atccggttga tttgcaggat cacatcctgc accgcgtcaa
     2521 acgccgccgc ttcccgttcg gcctgcgaag cgcccgcctt ttccaaagcc tccgtatcat
     2581 ccgccttttc cacgcgtttg cccgggacgg cggcaaacac atcgccgtgg cgcaacaact
     2641 ttgccgcagc cccggccgac acctcgcgca cctggccgtc ttcgaaaacc aagcccgtat
     2701 gatagatacg gtcgcgccac acggcacgcc cgccaatata cttgataaaa accttatcca
     2761 tccaaccccc cgccgccgtc cggacggcat tgtcaaatac agcaacgccg caaaggcaaa
     2821 tccccgggcg gcgtttcatt ccgcttacaa ctggccgaac ttctcgccgt aaatcaaaat
     2881 atcgatatcg gcggccttct tattgcccgc ccctttaagc gtaaccgtca gcaaagcctg
     2941 cttgggcagc gtaaccagtt tggcagactg gcagcggata cgcccggcag acgcaaaatc
     3001 cgcgcccgaa gcaaaataag ccgcatcctg aggcacgtcc gcatcatccg caccgtccgc
     3061 atacgcaaag ccgacatcgg cagtgatacc ggaagacatc gccgtcttca caataatctg
     3121 cgcgtcatcc aaacggaaac cctgttccaa gacacccagc gccaacacat cgcccgcctt
     3181 gggcggctca gaagcatccg cccccaagat cgcaccgtcc tgcttcgcaa cgatacggta
     3241 atgctccgcc gccatattgc cgtaaggcac accgccgaaa cggttgccgc cattgtttct
     3301 cacatgaatc cgagccataa aaaaaccccc caactcgaca aataggaaaa gccgcccttt
     3361 caagcggcat tcgaatcagc ggataccgcc gtgcaaagga accaccgtat ccacaaccgt
     3421 gacaccgtag tcggtaattt ccttcgcgcc cccgccgaca tccacggcaa agcgcgtttt
     3481 cgccacaccg cgtatcgtac cgacgagcgt ttccacacgg ttgccgtggt caagctcctt
     3541 ctcagaccaa aagaaaggca taccgccgtg tttgccggta ttcgcaaacg cctccaacac
     3601 cgcctggccg cccaaaataa ccgaacggtc gaccgcaaac ttgtccgcaa acgaagccgg
     3661 gattttcaag cccgattccg cctcgctgaa cttatcggcg caatacttca tctcatcgcc
     3721 cgcatagaaa cggatggggc gcggcatttt caccaggata aagccgttcc acaaacccgc
     3781 atcgcccaaa aacagcggat tttgatttgc ctgggaggcg cgcgcgattg ccgaagcctg
     3841 aagctggcgg aatttcggat cggcggcaaa acggttgtac tgcgccgggg aaagcagcca
     3901 cacgcgcaaa ggcgaatcac ccgccgcctt gtcgccctca aacttcacaa tcggcggcgg
     3961 cagcggaatc tggtcgagca cggtacgcat actgtccacc gtatccatcg taaacaaatc
     4021 ggtagaggca atcttcaact cgccgccgtt cgccgcaacg cccgttaccg catcgcccga
     4081 agccgtaaaa tggcggtttt tggacggggc tttgaccgga ttgaccgcat aatcattgaa
     4141 tttcgggtcg cccgccaaag gcacgcccca ttcgatattg tcatgaaaac cgcgcgcgcc
     4201 cgccatatgc accaacagcg tctggtcggc ataacggtcc atcaggcttt gcgccgccgg
     4261 acgaatcagc gcgcgataat cggcagggct gcgctgattc gtcatcgtgc cgccgccgtc
     4321 aacggggaaa cgcgcctgat tcacacgcaa acccgcctcc gacaggctca tccccacgcc
     4381 cctgccttcc gccgtgttgt cgcccataat cggcagggcg gaaacagggt tgaccaaatt
     4441 gaaacggatt tcgtcaccca tgccgcgcgt caaatcctga cagcgcacga ccggcatatg
     4501 ctgggtcgtc tgtttgcgca aagtcgcctc cgcacccgcg gtaccggcag gcatcttgcc
     4561 cgccaaacgg ttcagcgtac tgttgcgctg catatgcatc gcaaacagcc ccgccgcctg
     4621 cttcatcatc gcctgcgggt cgccgtaggc cgtattcgtc ttttgtgcca taaagagcct
     4681 ccctcaaaaa ctcaagaatt taaaaacttc tcaacctgct cttccgtcat ggaagccagt
     4741 ttttccgcca gcgcgttgcc gctcaaataa tccggcgggc cgtccgaagc cgtatggtcg
     4801 cgccccgccg gaatatccga cagcgtattg ggcgtattct tcccggcagg cggcttttcg
     4861 gcgggttttt ccggttcggc ggcggatttt gccgccttaa acatatcgaa cgccccgatg
     4921 acctcggcgg cagtcccgtc cttaagcgcg tcattaaacg ccttgcggac aagcgggttc
     4981 tgcgcatcca gccactcctc cagctcgcgg ctttccacaa tcgaatccgc atcggggtgc
     5041 gccgtataga tttcgcggta atgcgccttt gccgcctcct gccgcttcat gtccgcctca
     5101 taacccgcca gcttctcctg aatcagcttt tccacgccct ttttcacatc ctcgtcggaa
     5161 aaatccccga acaacgaatt atcggaaccg tcagccgttt ccactccggg tttttccgcc
     5221 cccttctcaa gctgggcaat gcgctccctc aaggcttggg cttcggcttt cgccgacttt
     5281 tccgcctcgc gcgcctctac cagcttttca taagggatag tgtgtttgcc gtccttggcc
     5341 tgaataacct tgtccgcacc gccgtccgcc gcgccgatac ccgcgccgac caccgcgccc
     5401 gtactgccga ccaccagcga ttccgcccac ttcttaccct ccaaaccgtc ttggatatcg
     5461 gggaaaacca actggtccaa acccaaacgc cccgacacgt ccagcggcgt caggcggctg
     5521 aagcccttgg ccaacacctc gcccgcctta tccccgaaag catccgccaa catattgcgc
     5581 aacgccgctt ccgcatccca cgggtcatcg tcgtcactgc ccaacatcga agccaccgca
     5641 agcagcgtcg acacaaacgg cagccccaag atgcccgaag ccatcgcatg cgagaccaac
     5701 agccccgcca gcgtcttacg cgcctcctta tcccccttaa acgcaaggta cgcattgcgc
     5761 cccagcgcat acaggatatt ctgcgaatac tgcttgaaca ggaagaccac cttcgccgca
     5821 ttgcccatca taaagcgcgg acggttttgc gccgcataat caaaatgccc gtcatacgtc
     5881 gcctttttcg cctgttcgaa agccgcgtcg ctgtccgccc ccgcccgttt cgccaaacgg
     5941 taggccgcga caaacgtaac ctggcggtta aacttctccg catgatggaa cagccaggcc
     6001 gccttatcca tcaccttctg ccaagccgac cccgccaacc ccgggtcgcc gttggccacc
     6061 cccgccaaat catgcgcctg cgacaaatcg atcacaccgt aatccgccgc ctttcggaac
     6121 gccgccttct catccccgtt caaactgtcc tcaatcgtat tgaacttctc cccgaacctc
     6181 agcccgatct gtttcgaagc ccgcagcaat tcccgcgccg caccggcata accccacttc
     6241 gccgccatca ccggataagc caccattgcc gtctgcgaca ggttcacaac cgcagaagcg
     6301 ggcgacatcc ccatcatcca caagaagccg aagcccgtca aagcctgcgc cagcttggaa
     6361 ggattcggat tcatcaccgc ctcgtggcgt ttcctcatct catccgccac acgctgcaac
     6421 tgacgctggt cgaaaccctc ctcatatttg cgcccgtcca caaaatcctg catcacatcc
     6481 aactgttccg ccatacggtc cgcatagcgc aacttcgcca gataattcgc accgctgccc
     6541 atattctgcg catatgcgcg cctcgcatca tcgctgaagc ccggcacgcc cttgcggtgg
     6601 atgccgtgtt tcgcccaaga cgtatcgggc agcgagttca aataaagctg cgtcagcgta
     6661 tcgttcaatc gggcccgttg cgccggatcc aaatccaaca taccgacagc ctcgcccagc
     6721 tccttcataa atccgctgcc gaccgcatcg cggcttcgga tataatcccg ggacttcatc
     6781 acgggcgaaa ccttaaaccc cggcccgaaa tcagccttca gcgcatcgcg cagcttctcc
     6841 gcctcgctca aagtttccgc gcgggacaca ttcgcactat tcccgtccgc atccttgacc
     6901 accaccagat aatcgccgaa acgcgccaaa gggaaataca caccgcccag ctcgttgtca
     6961 aaacgctcct tcaggcggcg caccgtttcc gcatcctgcc ccgcacgcgc caaccgttcg
     7021 gcaagcgcat cgcgcacctg cccgaaatgc gccctataat catcccgcgc cttgcggtac
     7081 accctctgcg ccgcatcagg cagcccggca aaacggcggt tcagcaaagc aagcccctcc
     7141 aaagcctttt gcgccccaac ctcatccttt tccaaacgct tcacatccgc gcgcgcctgc
     7201 tccaacatcc gtaccgcatc cgttttagcc cggctttccg ccgccgcatc cgccccggcg
     7261 cgcctcaacg cccgcttcgc ctccgaatcc gcataaaaca gacggcgcag gcgcatatcc
     7321 gcctcatccg ccaaaatttc ccgaccgtgt ttttcctgcg ccttctccag cgcataagcc
     7381 gccttatccg ccgcccgttg cgccttattg taagcagcat ccgcacgcgc ggtacgcgca
     7441 ccggcggaag caacggccgc ctccgccttc gcgattttac cgtccgcaat atccaaagcc
     7501 gtccggatgc cgtccaaacg cttctgagca tcctttcgca tcagcgggtc ggcatccacc
     7561 ttcgccagcg tcgcatcgtg catcagatcc gcaagcgctt tcgcatcctc ctccttcaac
     7621 ctgccccatt ccctgacaac cttgtccgcc tccgtaaccg ccttgttcgc atccgcgccg
     7681 aagagttccg acaaacgccc gtattccttc aggccgtcca aaacgccgcc gtaaatgtcc
     7741 tcgatctgcc gcctgcccaa aaactggagc tgaatcccct tggaagcatc ccagcggtct
     7801 ttcagcgcgt ttctcaaatc ggatttttta cccgttatac ggccgattgc ggccccgatg
     7861 ttcgccgcac gggaaaaacg caccgcctcc gtgtcaaaat cggcaatgcc gcccttgccc
     7921 gcatctttgt cttgcaaaat ctgcaacagg cgtttatcat caatgcccga taaaggcgat
     7981 tgattggaaa tctccgcact ggataagcga gaggtcattt ccaaaaggtc gcctttttct
     8041 attcccgtca atttatggtc atagtatttg tcgcctgttg tcgcaacggc gattgccgct
     8101 tttaccgtgt aatcagcccc gccgatattc aagcctgcaa cataatattc atactctcga
     8161 atatcgggat ttttggcttt gtcttcattc ggcaaagtat cgatataaat cgacttctcg
     8221 ataatctgcg ggatggcggc tatgctttgc aaatgttcag ggttgccgac atcgtgatgc
     8281 aacacctccg ttatgcccgc ccgtccgagt gaaatttcac gccccgtgtc cttattcaca
     8341 taaggcccgc gcaaagattt gccgtattcc agcgcattgc gcttatattc gcgcaaattg
     8401 ccgccttccg gaacctccct gcccgagata cggatggttt ccgcacggcg cagcttctca
     8461 aggctttccg acttggaacg ttccgccgca ccgtcttcgg cccgcgcgaa catcactgca
     8521 cgatgattgc cgccccaagg cgcatcccgc gccccttcca cattcccgtg caaatccgcc
     8581 agcatcgcaa acacatccgc gtccgacatc gcaccgccgg ccttgcccgc caggcgttgc
     8641 agcacacggc gcaacagggc gccgatacgc gccaacacgc ccgcaatgcc gcgtttcaaa
     8701 ccgttgccga ccttcacgcc gtaacggttt tcaatgcccg cccaaccgcc ggtacgctgc
     8761 gccgcataaa gctccgcgac cgcctcttcc accgcggcgg ggcgcaccga ggccgccgca
     8821 tcgcccgtgc cttcgcgccc ttcctgcacc gcgtccgcaa tgcgccgtat caggccgttg
     8881 ccgtccgcac gttccaattg cgcacggtac ttggcgaaac catccgccgc aaagcccctg
     8941 tgccccagct cgtgccacgc cgcccatacc gcacgttcgg gcgtaaggtt ttccgccacc
     9001 agcgtgattt tgcccgtcct gccgtcaaac cagccctcca cacgctgcga caacagcatc
     9061 tgcgccttgt ccggcgccgt ttcggacacg gcggcgacat ccacccgttc cgccagtccg
     9121 cctatgcttt cggcaaggcg ttttttgata ttttcggcgt gctcgcgcaa tgccttaaaa
     9181 ccttgcggcg cctgacgccc tttcacggta taaacaggcc ctccctgcaa cacacgcgcc
     9241 ttgcgccgtg cctcttccgg attgtccaaa gccgttttcg caaacgtttc aggttcggca
     9301 gccttatccg aagacggctt ttcggttgcc gcgccttgtg cggcggccga cttgcccttt
     9361 ccgccatcga agtgggattt tcccgcttcg atatttcgca ccttatccga agacggcttt
     9421 tcagttgccg cattttttgc agcagccgcc ttgcccgcaa caggcgcgtc ttttgcccgg
     9481 gcaggctgcg ccctgcccgc cggtttcccg gcagaagcgg catcgcgcgg ccgcgccatc
     9541 accttggccg gcgcccttgc ttcctgcgtc ggacgataat cccgacccgg ctcggacggc
     9601 acggcttccg acaaaccgcc cgcccgcaag gtttccgcct cccgcccctt caaataacgg
     9661 cggccgtcgg agacaaggcc gtcagagttg gaaggaccgg ccatatcggc aaactcctcc
     9721 ggcatcccgc ctttgcccgg cctgcccggc acacccgcaa gcgcatcaat atgcctgcgg
     9781 tccgtatgct cgaaacggta ttcgccgccc cccaaaggca cacccgcctt ttccggcctg
     9841 cgcctgtccg ccgccaaacg gcgcgtgaaa tccgccgccg catccgccat ccgtttctta
     9901 ggcgataccc tgcccgccga ttccgcaacc tgcggattca ataccggcaa caccgtatcg
     9961 gggcgtttgc ccgcaacagg cgcacgtttc ccgccgtccg tcccggcaag gttttcagac
    10021 gcggacaggc cgggcgcggc accttccgcg cgcgcccgaa cctgtaagtt ttgccgacgg
    10081 gccggcgcat tgccggacgc aacggcggac cctggcaaac cctgcaaggc agccgcattt
    10141 gcatccgccc ccgcatcagg ggtcaaaccc ctgccgcctt gggtcaaacc ctgccgcaca
    10201 tcctgccgca catcctgcgc caaaccctta tcttccgtgg gtaaagcccg ggtcaaaccc
    10261 ctgccgccgc cgacaacggc ctcagacgcg ccgtcatccg gcaacgccgt ccgaaccccc
    10321 tgcaaacgct ccccctcgcg gctcaacagc ggcacgctcc aaccgttgtt gcggcggtaa
    10381 ccgtaaaccg cacggttaag cctgtccaac acatccgccg attccggatg ttgcgcacgg
    10441 taagcgcgta cagccccggc cgattccgcc aaaccctcag gataatgtcc gcgcatatcc
    10501 gccatacccg cctcccggcg cataatcccg tccgccgtat agtccgccac cgtctgcgca
    10561 tgacggcgca cccattcagg cagcgcgtca aaccgcctgc gcgattcctt atccaacgca
    10621 tcggcaggga cggaaaaccc ttttttagga acaggcacgg catccgccat acgcacgggc
    10681 ggcggcaggt aaccctgttt ggcttcggaa gccgcctgat aatccgcctc aatccgcgcg
    10741 tgatacgcct gctcgatttt tcggcgcaca ggcgcggcga tttgcccgaa atccgcaacg
    10801 cccttaatat caaggcccgc ctccttcgcc aaagccttgc gcccccgggt atccaagccg
    10861 tcgaagtatt ggcccgcagg cagcggcgag acccgcgcaa tcccgcccga agcggcggcg
    10921 gcagaaccgc ccggcgcaac cgaagccgca ccgcgcggcg caccgccgga acgcacattg
    10981 ccgtaagcgg acggaacacc gcccctgtcc gcatccgccg accgtccgga cggcgcatca
    11041 tccgcaaccg gcggcgtttc catatcgtca gacaccgcag acggcacagc cgcgcccgaa
    11101 tccgccgcca aagcagcggc cgcagaaacc gcaccgtcat ccggattaat ccccaccgcc
    11161 tccgacggct tggcccggta tttagccgcc atgtccgcat actgacgcgc caaaccgtcc
    11221 ggcatcacgc ccgtatccga aaattccgcc ccgtcctccg acgggatacc cgaaacatcc
    11281 ggctgttttt ccatcccgcg cgccaattcc tccgcgcggg gcgtattcct gtcggcgggg
    11341 ccgctgaaaa accgccccgc ctcctcctgc ttcgtacggt ccgcaaactg ccgcaaagcc
    11401 ggatgcgact gatcgtgatg cgccgtatca aaacccgcgc cgccctgttc cgcgccgccg
    11461 tccgccgccg cacgcaacgc ctgcgcccct tccggggcc
//
LOCUS       DAXGCP010000074        11094 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.074, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000074 DAXGCP010000000
VERSION     DAXGCP010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11094)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11094)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11094
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.074"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..879)
                     /gene="mafA"
                     /locus_tag="ACFJCW_001662"
     CDS             complement(<1..879)
                     /gene="mafA"
                     /locus_tag="ACFJCW_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC4151758.1"
                     /translation="MRARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPALSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSA"
     gene            complement(1014..1325)
                     /locus_tag="ACFJCW_001663"
                     /pseudo
     CDS             complement(1014..1325)
                     /locus_tag="ACFJCW_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1433..1627)
                     /locus_tag="ACFJCW_001664"
     CDS             complement(1433..1627)
                     /locus_tag="ACFJCW_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HFC4151759.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMNK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(1617..3698)
                     /locus_tag="ACFJCW_001665"
     CDS             complement(1617..3698)
                     /locus_tag="ACFJCW_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HFC4151760.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMTVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRHIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSAFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLNFPVDAATLLHTAKEVGENTILSRTGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVALVPAVGVLLVTCYAGLQKLFHNDPRASFLAHAGKYSDALAKNEVLAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVTVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEEQSEA"
     gene            4221..4601
                     /locus_tag="ACFJCW_001666"
     CDS             4221..4601
                     /locus_tag="ACFJCW_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HFC4151761.1"
                     /translation="MNIRFFALTVSVLSLAACAVPEAYDGGGRGYMPPVQNQAGPDDF
                     RAFSCENGLSVRVRNLDGGKIALRLDGRRAVLSSDVAASGERYTAEHGLFGNGTEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(4737..5225)
                     /locus_tag="ACFJCW_001667"
                     /pseudo
     CDS             complement(4737..5225)
                     /locus_tag="ACFJCW_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
     gene            5557..6945
                     /locus_tag="ACFJCW_001668"
     CDS             5557..6945
                     /locus_tag="ACFJCW_001668"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HFC4151762.1"
                     /translation="MNEYSQLIKHPDISLSPISDGIGVGNPATGEISAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTEARGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIVKP
                     ASLTPLSAYALAVLAYEAGVPQDLLPVVSGRASEISHEFATNPTVRKISFTGSTEVGA
                     KIFAGSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKFRNSGQTCVCTNRVYV
                     QSGIYDVFCRKLSEKAAALKLGDGLDEGVNQGPLIEEKAVEKVEQHIADALSKGAVCL
                     TGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFETEAEVIEAANNTEYG
                     LAAYLFTSDTARQWRVGEVLEYGMVGINTGLISNEAAPFGGVKRSGLGREGSKYGADE
                     YLELKYLCIDAG"
     gene            7056..7841
                     /locus_tag="ACFJCW_001669"
     CDS             7056..7841
                     /locus_tag="ACFJCW_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HFC4151763.1"
                     /translation="MMENGKTFPRWRFALKSAGWHLLISLLVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALAYGL
                     HSVSLARPVVEAFEQDRMTIVTAAEVVVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIIP"
     gene            8209..9765
                     /locus_tag="ACFJCW_001670"
     CDS             8209..9765
                     /locus_tag="ACFJCW_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HFC4151764.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMVVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESV
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQYAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLEAIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDTDFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            9782..10528
                     /gene="surE"
                     /locus_tag="ACFJCW_001671"
     CDS             9782..10528
                     /gene="surE"
                     /locus_tag="ACFJCW_001671"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HFC4151765.1"
                     /translation="MNVLISNDDGYLAEGIAILARVASEFANVRVVAPERDRSGVSNS
                     LTLDRPLQLKQAQNGFCYVNGTPTDCIHVGQFALPDFKPDVVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGMPAVAFSLNDASGRYWATAEKALWTLLAHFFKKPPSAPVLWNVN
                     IPAVAPEDVRGIKITRLGRRHHEQNIVPSRNPRGEQIYWIGPVGEVSDREEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAAFWHTD"
     gene            10630..>11094
                     /locus_tag="ACFJCW_001672"
     CDS             10630..>11094
                     /locus_tag="ACFJCW_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC4151766.1"
                     /translation="MLKQTTLLAACTAVAALLGGCATQQPAPVIAGNSGMQTVSSAPV
                     YNPYGATPYNAAPAANDAPYVPPVQTAPVYSPPAYVPPSAPAVSGTYVPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPK"
BASE COUNT         2610 a         2778 c         3044 g         2662 t
ORIGIN      
        1 ggcggagtta cccgtatgat tgccgtatgg ccggatatcg gagaaatcga ccatcaatcc
       61 ttccgtcggt ttgattcctt tgcttacttt atacggcccc atccacaatg cgtaattttc
      121 tttataggca gcttcaaacg cattggtttt gggtttgatg agcaattttt tattggttct
      181 gtctactgcg aaatattcca gttttgtttg ggctttcagt gtttcggcat tgtataggtg
      241 catttcggtt ctgttgcgta tcgttccgaa tacgtcgatg ttaataaaca catctgtatc
      301 ggcattggca ggagaaacaa cgtctatgcc gcgcaggaaa aatacggtct gtaccaagtg
      361 ggaaagaaag gcggtgtcgc gcgggttggt cgtcaaggtt tcatttcgat aatcccccat
      421 cccgccaata tttaagccca gactgctcct acttccgcta ccgtctgatt gggtgcgcga
      481 gagtgcaggg gcattaagtg tagataaaga agtggttaaa cccgtcaaac cgcctgatgt
      541 tgtttcagcg gtggtttcgt aacgcggata ggtgtaatcg gtgcggacgg cagggctgtt
      601 tatgtattcg ccgcgaatca gtgcatcaat ggagtagcga ccccctgtca aactgcctga
      661 accttggtcg cccatagttg caatgtacaa tgcaactttt cgtccgtgta atgcctgtaa
      721 atccatgtct ttaacggcag ctctggcaga agcggccaca agttcttgtt cgaccgcgaa
      781 gcgtttgcct ccgccatgcg atggaatacc tgtcagtgtc ccgcaggcgg ataaaataaa
      841 aactgaaaaa agaataggta tcagcagccg tgcccgtata gattttctcc tttatgaaaa
      901 acaaattgta tcaaaattgt aaataaatta ggggccgtcc tggacaacta ggataaactc
      961 gattttacta attgttttaa aatggaacaa gaacttttat ctcactgttg ttaaaaacgc
     1021 cgttcgcact cctttaaata cggctcaaaa tgctctttgg gaatgccgtc aaacttgcgt
     1081 aaatgacgtt ttgcccggtt ccaaaagttc ccaattccat taatatggtt ttgtcgttcg
     1141 gcaaaatgtg tgctgtgatt gatacggaaa tggctaaatt cgcctgcatc caatacatca
     1201 tagcgacgat aacaatccgt ataaacaatg ctgtcaggct ctgttgctgt tcttgcagtt
     1261 acgcctgcga caaacagttc aatgagttta ttttgtttat accggcttag acggcttttt
     1321 ctcataggga taattctaac ttaatttgaa tttccctagt tatctaggac agcgccttat
     1381 tataaaaata ccgtctgaag tggcgttcag acggcatttg tttcaagcgg ggctaacagc
     1441 agcgtccgcc gtttgcgccg cagcggcgtt tgcggcaata gtcttgaaat tgcagcttgt
     1501 tcatcacggg ggcgttggga ttatgtttac gttgttgtgc aacgtagttt tcataatcgg
     1561 gcacgcctgc catcaagttt gccgtcagct tgatggtttt ccaccaagac gcgagcttat
     1621 gcttcacttt gttcctccgg ttgtttgccg tcgcggtaca ccgccgggat ttctttggcg
     1681 gtcggccagc cgactttgcg tgctttgagg gcggtacgca aaccgtacgc ggcaacagtc
     1741 acgacaaccg acaagaagag gatggtcaga ccggcattaa tcttgtcgtt gaagatgatt
     1801 tgcgccattt cgccgatgtc tttagcgggc gcaaggactt cgtttttagc caatgcgtcg
     1861 ctgtatttgc ctgcgtgggc aaggaagctg gcgcgcgggt cgttgtggaa cagtttttgc
     1921 agaccggcgt agcaggttac aagcagtacg ccgacggcag gaacgagtgc cacccagaca
     1981 taacggtcgc gtttcatctt aatcagcaca acggcacaca taatcaaggc tacgcctgcc
     2041 agcatttggt tggcgatgcc gaataaaggc cagagcgagt tgatgccgcc cagcgggtcg
     2101 gttacgccgg tgtagaggaa gtagccccac aatgccacgg cgaagaaggt cgcaatcagg
     2161 ttggcgggga tggagtcggt gttgccgaaa ggtttgtaga agatgctgcc caagtcttga
     2221 atcataaaac gtgcgacgcg cgtaccggca tcgacggcgg tcaggatgaa caaggcttca
     2281 aacaacaggg cgaagtgata ccagaatgcc atcatcgcct cgcccggaat cagacggctc
     2341 ataatgtgcg ccataccgac tgcgagggta ggcgcaccgc ctgtgcggga caggatggtg
     2401 ttttcgccca cttccttagc ggtgtgcaac agggttgcgg catcgacagg gaagttcagc
     2461 ttggtggtaa ttacttcggc ggcggtgttg gcatccgtac cgatcagtgc ggcggggctg
     2521 ttcatcgcga aatacacgcc gggatcgagc gatgcggcgg cggcaagcgc cataatcgcc
     2581 acgaaacttt ccatcaacat accgccgtaa ccgatcatac ggacgtgggt ttcgttttcc
     2641 agcattttcg gcgtggtgcc ggaagaaatc agtgcgtgga agcccgaaac cgcaccgcag
     2701 gcgatggtaa tgaacaagaa cgggaacaat gcgcctgaga ataccgggcc cgaaccgtcg
     2761 ataaagtggg taaccgcagg catttgcaaa gcgggattga cgatgacgat acccaaagcc
     2821 aaggccgcaa tcgtaccgat tttcaggaag gcggagagat agtcgcgcgg ggtcagcaag
     2881 agccagaccg gcaaaaccga agccacgaaa ccgtaaatca taatcgccca agtgagctgg
     2941 atgccgtcaa ggtcaaacca atgcccgatg gagcttttcg ccacatcttc gccgtaaatt
     3001 accgccaaca tcagcaaaat aaagccgacg atggaaatct cgccgatttt gcccggacgg
     3061 atatggcgcg tgtaaatacc cataaacagc gcaatcggca tcgttgcggc aatggtgaac
     3121 gtaccccaag ggctgtgaac caatgctttt acgacaatca acgccaaaac cgccataatg
     3181 atgaccataa tcatcaaaat accgatggag gcaatcacgc cggggacagt gccgagttcc
     3241 tgtttcacaa tatcgcccaa agacttaccg tcgcggcgca tagagacgaa caagaccgtc
     3301 atatcctgta ccgcgccggc aaataccacg ccgaagataa tccacaaagt accgggtaga
     3361 taacccattt gcgccgccaa aaccggaccg accaaagggc ccgcgccggc aatcgcggca
     3421 aagtggtgtc cgaacaatac gcctttgtgc gtcggaacgt agtccaagcc gtcgttgtgc
     3481 cgctcggcgg gcgtgagacg gttcggatcg agccgcatca cgcggttggc gatgtagagg
     3541 ctgtaaaaac ggtaggcgat acagtaaacg gatatggcgg cggtaaccat ccataccgcg
     3601 ctgacctgtt cgcctcggct gagggccaga gtggtaaagg atgctaagcc gaccagtacc
     3661 actatgcccc aaatgaggaa ggttttgagt gatttcatcg aataaatcct tatctcacac
     3721 tgtcggaata tgtcggagcg gacaggcaac ggttggctac ccgtaatccg atgccgacac
     3781 aaaccggagt ttgaatgatt gacgaagtat gaaacagtgc gcttgtcggg acttgtgcct
     3841 tatgcccgca tcaaacagtg caggaatgta cgcgcacaaa cgttaaacgc cgaatagaat
     3901 tttaacgcaa attagcacac tgatagcggt ttttacttgg aatttggaaa aatttacatt
     3961 cctccgggcg ggcaggcagg ttcagacggc atcgtcaggc aaaaggcggt gtcggaagac
     4021 gggtaaagaa ggggcgcgca atccggatta ttgatttatc gtgtttcctt ttcggttgaa
     4081 cctcagccct ttggggcggt aaaatcagac tttatttggg aggggcgcaa ccccttccga
     4141 atcaggacgg cacatagggc ggtgctttaa tgtgtcgtcc tgtgtgttga aacatatttt
     4201 ctttttattg gggagctttt atgaatatca ggtttttcgc gctgaccgta tcggttttgt
     4261 ctttggcggc ctgtgccgtg ccggaagcgt atgatggcgg cggacgcggg tatatgccgc
     4321 ctgttcaaaa ccaagccggc ccggacgatt ttcgagcgtt ttcatgcgag aacggtttgt
     4381 ctgtgcgcgt ccgcaatttg gacggcggca aaatcgcgtt gcggctggac ggcaggcgtg
     4441 ccgtcctctc ttccgacgtt gccgcatccg gcgaacgcta taccgccgaa cacggtttgt
     4501 tcggaaacgg aaccgagtgg caccagaaag gcggcgaagc ctttttcggc tttaccgatg
     4561 cctacggcaa ttcggtcgaa acttcctgcc gcgcccgtta aacggggcag cctgtttgaa
     4621 ccgccgtccg gatttttcgg gcggtttttt atgccggttt tgttttggcc gtcggctggt
     4681 tccggcggtt ttcgggcgtg gcggattatt tttcgtttcg ttctgggttt atcctgtcgg
     4741 cagcggctca atgccaactt taaacctgct ccgatttctt cagggctgtt atccaatgat
     4801 aaaattacat cgtctgcatc aatggcatcc cacgcttccg gcttgacatg gcggctcggg
     4861 ctgattttca ggcagccgtt gtgcagccaa atatccccgc tcatcatgtt tttaaatagg
     4921 gcgcgtctgg ttttatagcc caagttcccg cataggttgg caacccaatc ctcatagcgt
     4981 tgccgaaatt tttcggtatc aaaaaaatct tggtcttccg aactgtcata aacgaaagtc
     5041 ctgctgtttg ccaacgcttg caagaccgtc gtgcctaaag tttcattgtc ggtatccaat
     5101 ggcaggatat ggggggatat aggtggtcta ttgccgttaa ccccaaacct gaacatgttt
     5161 gaacaatcag agcttcttca ttagcataaa aaactgccca ataattgatc ctgtttaaaa
     5221 atcattattt aatctccgta attttgactg taatgttttg acttttgcca tactctacca
     5281 cgcgttgtaa ctgcaatctt tgcttcttat atattgtacc ctatcaaagg gctgcattac
     5341 ttttctttct aaagattact atcgcataaa aagtattttt cttaaacgac agggatgcgc
     5401 ccgtgccata ttcaaacacc gcccggatgt tgcgctgccc gatcggatgc ttcagacggc
     5461 atcggaaggg tttgtagttt tggaatatga agatgataat gtccgcgaga ttgacggcat
     5521 ttgaaagcgg ttatcccgta taccggagga cacgaaatga acgaatattc ccaattaatc
     5581 aagcatcccg atatttccct ttccccgatt tcagacggca tcggggtcgg caatccggcg
     5641 acgggcgaaa tttcggcgta tgtccgcaac acgggttcgg acaagctgaa aaacctgatt
     5701 caaaaggcgg cggcagcgca aaaattatgg gcggcgaaaa ccgccttgga acgcgccgac
     5761 atattgtggc gttggtattt tttagttaaa gaaaacaaag aagcactggc gcgtctcatg
     5821 acgatggagc agggcaaaag cctgaccgag gcgcgcggcg aaatcgatta tgcggcttcg
     5881 tttgtgcgct ggtttgccga agaggcgcgg cggattgacg gcgatgtgct gacgagtgtg
     5941 aaagcgtcgc aaaaactggt tgtgttgaaa cagcccgtcg gcgttaccgc tgcgattacg
     6001 ccgtggaatt tcccgtccgc gatgatagtc aaacctgcat cgctcacgcc tttgagtgcg
     6061 tatgcgttgg ctgtactggc ctacgaagcg ggcgtgccgc aggatttgct tcccgtcgtc
     6121 agcggccgcg cttcggaaat cagccatgaa tttgccacga acccgaccgt gcgcaaaatc
     6181 agcttcaccg gctcgaccga agtcggcgcg aaaatttttg ccggcagcgc ggcggacatt
     6241 aaaaaactca gtttggaact gggcggcaac gcgccgttta tcgtgtttga cgatgccgat
     6301 ttggacaaag ccgtcgaagg cgcgctggcg agcaagttcc gcaacagcgg tcagacctgc
     6361 gtctgcacca accgcgttta cgtccaatcg ggcatttacg acgtattttg ccgcaaattg
     6421 agtgaaaagg cagccgcgct caaattgggc gacggcttgg acgaaggtgt gaaccaagga
     6481 ccgctgattg aggaaaaagc ggtagaaaaa gtcgaacagc acatcgccga cgcactctcc
     6541 aaaggcgcgg tctgtctgac cggcggcaaa cgcagcgcgt tgggcggaac gttttttgag
     6601 ccgactgtct taagcggcgt tacggcgcaa atggcggtag ctcgcgagga aaccttcggg
     6661 cctttgtgtc cggtgttccg ttttgaaacc gaagccgaag tcatcgaggc tgcgaacaat
     6721 acggaatacg gtttggcagc ttaccttttc acctccgaca ccgcccgtca atggcgcgtc
     6781 ggcgaagtct tggaatacgg catggtcggc atcaatacgg gcttaatcag taatgaagcg
     6841 gcaccgttcg gcggggtgaa acgcagcggt ttgggacgtg aaggcagcaa atacggtgcg
     6901 gacgaatatc tagaattgaa atatttgtgc attgatgccg ggtgacggat gccgtctgaa
     6961 tggcagggtt tcagacggtg tcgcatttta agcagtctct atctgttgta caatgcgccc
     7021 tgtttttacg gttatttttg atttgaatgt aagatatgat ggaaaacgga aaaacattcc
     7081 cgagatggcg ttttgccttg aaaagtgcgg gctggcacct cttaatcagc ttattggttg
     7141 cagggctggc ggccttgctg gtttttaagg tttggtatcc ttatccttat gccgagctga
     7201 cgggcggtct gtcgctttat cagctggtgg tggcggtcga tatcgtatgc ggcccgctgc
     7261 tgactttaat tttggcaagc ccgaagaaaa agacaaaggc acgcatggtc gatttttcca
     7321 tggtcggcat catccagctg gcggctttgg cgtacggttt gcacagcgtt tcgctggcgc
     7381 gtcccgtggt ggaagcgttt gaacaggacc gcatgaccat tgttacggcg gcggaagtcg
     7441 tggtcgaaga tttgcacaaa gcccccgaag ggctgcaaag cctgtcgtgg ttcggcatcc
     7501 gccgcattgc attgaaagaa cctgaggatg cggatgagaa gaacaagacg ctggatttgt
     7561 ccctgaaagg tatcgagccg agtatgcgtc ccgaccggtg gctgccgtat tccgacaagg
     7621 aagcagaaaa aatccgcaaa catctgaaac cgctgaaagt cttggcggat gcgagaaaaa
     7681 cgacggttgc ggacattctg aaacaggcag gtctcgccga aggggaggag ctgtattacc
     7741 tgccgtttac cagcagcagg cagaaagagt ggatagtcat taccgataaa gagggcaaca
     7801 ccaaaggcta cgcgccgata gacggcttca tcatccctta accattggga ttccgcccgc
     7861 actcgaacat ccgttcttcg cggcggtaga atcagactgt atttgagagg ggcgcaaccc
     7921 ctcaatcagg gcaacacata gggagacgct ttatgtgccg tccgtgtatt gaaacatttc
     7981 aaaataagcc catgccgtcc gaacatcctt tcagacggca tggcgttttg ccattgcccc
     8041 gataagctgt taaactgttt aaattatttc gaccgaaggt acacgcacat gaaagacccc
     8101 gagcagagca gtaagcccgc ccgccgtttt ttgtgcgtac cgtctgttca ggcagcttga
     8161 gcgtttcagg ctgccttttt gcgtttgaac ttgaggaaca cgaaaatcat ggatttcagt
     8221 tggttggcag aaccgcatac ctggataggt tttgccacgc ttttggtgtt ggaagtcgta
     8281 ttggggatag acaaccttgt ctttgtggcg attttggcaa acaaggtcca gcccgcacgg
     8341 cgcgaccgcg cacggattat cgggctgggg ctggcagtcg tcatccgcat cattatgctt
     8401 gcttttatgg cgcacatcat cacgctgacc gagccgctgt tccaaatcgg cggcctcgcc
     8461 gtttccggca aggacatgat tatgctcgcg ggcggtattt tcctgcttta caaagccacc
     8521 accgaactgc atgaacgcct cgaagggcac aaccgtttta ccgttgccga caaccaaaaa
     8581 aaacacgcgc cgttttgggg cgtggtcgcg caaatcctga tactggatgc cgtgttttcc
     8641 atcgattcgg tcatcaccgc cgtggcgatg gtcgatcaca tcgtcgtggc gatgggcgcg
     8701 gtcgtcgtcg caatggttgt catgatttcc gccagcaaac tcttgaccga atttgtggac
     8761 aggcatccca ccgtcgtgat gctctgcctt ggttttttgt tgatgatcgg tttcagcctg
     8821 attgctgaag ccttccattt ccacattccc aaaggctacc tctacgccgc catcggcttc
     8881 tcgattttaa tcgaactgtt taaccagatt tcgcaacgca acagccgcaa aaacgactac
     8941 atcggcagct cgtggcgcaa gcgcaccgcc gaaaacgttt tgggtatgat gggcatacgc
     9001 gaaagcgtgc ttgctgacgc gggcggcgaa tccgtggatg acgcgcattt tgaagaaaac
     9061 gaaaaatcga tgatacgcag cgtgctgacg cttgccgaac gcccgattat gggggtgatg
     9121 attccacgcc gcgacatcga acggctggac atttcccaaa gccgcgaaga acagtatgcc
     9181 caactgcaaa acacgcctta cagccgcctg ctcgttgtcg gaaaggcggg cgtggacgaa
     9241 ccgttgggct acatcaacaa aaaagacctg ctgtcccaac tgctggaaac aggcggtctc
     9301 gacattcaga cggcattgcg ccagccgctc gtcctgcccg acggcacgac cgccttgggc
     9361 gcgctcgaac tcttccgcca aagcagcgcg gattacgctt tggtggtgga cgagttcggc
     9421 gcggtgttgg gtatggtgac gatgaaagac ctgttggaag ccatcgcagg cgagttcccc
     9481 gaagaattcg agcgcgaaga agaacccgcc gttcagggga atcccgatga aagcctgacg
     9541 gtggaaggcg cgttggaata tgtggagctg gcatcccaac tcaacctgcc gcagcaggag
     9601 gaagataccg atttccatac cgttgccggg ctgattatgg aagaattgca aaccatcccc
     9661 gatgtcggcg attttgccga ttttcacggc tggcggtttg aagtggtcga aaaagaaggg
     9721 cagcgcatcg agcgggtcaa aatcaccaaa ttgcccgaag aataagcatc caggataaaa
     9781 aatgaacgtt ttgatttcca acgacgacgg ctatctggca gaaggcattg ccattctggc
     9841 gcgggttgcg tcggaatttg ccaatgtcag ggtggtcgcg cccgagcggg acaggagcgg
     9901 ggtcagcaat tcgctgacgc tcgaccgtcc tttgcagctg aaacaggcgc aaaacggctt
     9961 ctgctacgtc aacggcacgc cgaccgactg catccatgtc ggccagtttg ccctgcccga
    10021 ttttaagccc gatgtcgtgt tttcaggtat caaccgtggc gcaaatatgg gcgacgatac
    10081 gctttattcg gggacggttg cggcggcgac cgaagcctat ctgatgggta tgcctgctgt
    10141 ggcgttttct ttaaacgatg cttccggacg ctattgggca accgcagaaa aggcactgtg
    10201 gacattgttg gcgcattttt ttaaaaaacc gccgtccgcg cccgtcttgt ggaatgtcaa
    10261 catccctgct gtcgcaccgg aagatgtcag gggaatcaag attacccgtt tgggcagacg
    10321 gcatcatgag cagaacatcg tcccgtcccg caatccgcgc ggcgaacaga tttattggat
    10381 agggccggtc ggcgaagttt ccgatcggga agaggggacg gattttggtg aatgcggcgc
    10441 aggttttatt accgtaacgc cgctgcaaat cgatttgacc gcctatccgg acatggcgga
    10501 gacggcggcc ttttggcata cggactgacc gtttttcaaa taccgtcggg ttttgcgctt
    10561 gagaagaacg cgcattttta ttatgatata ccgcattcag gctatatatc ggaacatgaa
    10621 ggttatctta tgttgaaaca aacgacactt ttggcagctt gtaccgccgt tgccgctctg
    10681 ttgggcggtt gcgccaccca acagcctgct cctgtcattg caggcaattc aggtatgcag
    10741 accgtatcgt ctgcgccggt ttacaatcct tatggcgcaa cgccgtacaa tgccgctcct
    10801 gccgccaacg atgcgccgta tgtgccgccc gtgcaaactg cgccggttta ttcgcctcct
    10861 gcttatgttc cgccgtctgc acctgccgtt tcgggtacat atgttccttc ttacgcaccc
    10921 gtcgacatca acgcggcgac gcatactatt gtgcgtggcg acacggtgta caacatttcc
    10981 aaacgctacc atatctctca agacgatttc cgtgcgtgga acggcatgac cgacaatacg
    11041 ttgagcatcg gtcagattgt taaagtcaaa ccggcaggat atgccgcacc gaaa
//
LOCUS       DAXGCP010000075        10985 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.075, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000075 DAXGCP010000000
VERSION     DAXGCP010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10985
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.075"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(25..1053)
                     /gene="trpD"
                     /locus_tag="ACFJCW_001673"
     CDS             complement(25..1053)
                     /gene="trpD"
                     /locus_tag="ACFJCW_001673"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HFC4151767.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQMMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMCEFASKVPLEDADGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVMEQMGANLNLTPEQIAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLDGKEGAARDIVLLNTAAALYAGNIAASLSDGISAAREGIDSGRAKAKKEEF
                     VGFTRQFA"
     gene            complement(1117..1707)
                     /locus_tag="ACFJCW_001674"
     CDS             complement(1117..1707)
                     /locus_tag="ACFJCW_001674"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HFC4151768.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVEAMRHFAGRLPIMGVCLGHQTIGEAFGGDVVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPDCLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTERGHDMLNNFLVEFQNFKPQKI"
     gene            2118..4394
                     /gene="znuD"
                     /locus_tag="ACFJCW_001675"
                     /gene_synonym="tdfJ"
     CDS             2118..4394
                     /gene="znuD"
                     /locus_tag="ACFJCW_001675"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HFC4151769.1"
                     /translation="MAQITLKPIVLSILLINTPLLAQAHETEQSVGLETVSVVGKSRP
                     RATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVAD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGKNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGAAYSDRRDRYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGFHDGDGAHAHTHNGKPWIDLRNKR
                     YELRAEWKQPFPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLAAYRNRF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDPYGKRPFIAQDDQNAPRIPAARLGFHLKTSLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(4934..5713)
                     /locus_tag="ACFJCW_001676"
     CDS             complement(4934..5713)
                     /locus_tag="ACFJCW_001676"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HFC4151770.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDVYLPVDAQAQVAIGDKVTGVKTVLARLPLTDS
                     QADPVSQAASVETAANPSAEQQQIEAAAAKIQAAVQDVLKD"
     gene            5783..8716
                     /gene="uvrA"
                     /locus_tag="ACFJCW_001677"
     CDS             5783..8716
                     /gene="uvrA"
                     /locus_tag="ACFJCW_001677"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HFC4151771.1"
                     /translation="MPSERGFRRHPRKCYNIGFPLFFQAASIMCNHHPRHSHDNDTIR
                     IRGARTHNLKNIDLDIPRHKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQ
                     FLQMMDKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIHDYLRLLYARVGTPYCP
                     EHNLSLSSQTVSQMVDAVLKLPEDTRVMILGPAVRERKGEFVDFFADLQAQGFARVRV
                     DGEVYQLDEVPKLEKNIKHNIDVVIDRVKVKADIKQRLAESFETALRHGNERALAMEM
                     DSGEEHWFSARFACPVCSYSLPELEPRLFSFNNPMGSCPTCDGLGNTNFFDPEKVVAH
                     PELSLATGAIDGWDKRNQFYFQMIQSLAHHYKFDVNVAWETLPEKVKKVVLHGSGKEV
                     IDFTYLSERGTTFNRSHAFEGIIPNLERRYRETDSETVREKLREYQNHRACPSCGGAR
                     LRKEARYVYVGGEPLHEVSAWPLTKTHRFFETLDLDGNKKQIAEKILKEITERLGFLI
                     NVGLDYLNLSRSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLLA
                     TLKRLRDLGNSVIVVEHDEDAIREADFVVDMGPGAGEHGGNVLIADTPENVAKCEKSV
                     TGQYLGGKKSIAVPSERTPVNPGRMLVLKGARGNNLKNVTLELPLGLITCITGVSGSG
                     KSTLINDTLAKITARELNRAQEEPAPYDDIRGLEHLDKVINVDQSPIGRTPRSNPATY
                     TGLFTPIRELFAGVPLSRERGYNVGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVP
                     CEVCHGKRYNRETLEIQYKGKNISQVLDMTVEEAREFFDAVPTVSRKLQTLMDVGLGY
                     IRLGQSATTLSGGEAQRVKLALELSKRDTGRTLYILDEPTTGLHFADIALLLEVIGRL
                     KGKGNSIVIIEHNLDVIKTADWIVDLGPEGGDGGGKVIAKGSPEEVAKVKGSYTGKYL
                     KVVLK"
     gene            8734..9375
                     /locus_tag="ACFJCW_001678"
     CDS             8734..9375
                     /locus_tag="ACFJCW_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Eco29kI family restriction endonuclease"
                     /protein_id="HFC4151772.1"
                     /translation="MNNNFDRSKHIYHNEAFVELVKDAIRFFHGTPVHTLPPPKQFKG
                     AGVYAIYYIGNNPLYKQYADWNRLSYNAPIYVGKAVPKGWRQARNSDNALNQSTELFH
                     RLKEHSRSIAAVSDLDPSDFMCRFVIFEGAGSDMIGTIEAALIKLHKPLWNSCVDGFG
                     NHDPGKGRYEQAKSDWDVLHSGRVWADRLNGIPNSYESILENINTHLEIIKRK"
     gene            9379..10512
                     /locus_tag="ACFJCW_001679"
     CDS             9379..10512
                     /locus_tag="ACFJCW_001679"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4151773.1"
                     /translation="MKSLEIFSGAGGLAKGLELAGFQHASFIELNKDACNSLRSNFNP
                     KLVYQGDVADFDLSSQEGIEVIAGGPPCQPFSLGGKHLAHEDRRDMFPHAVRYVEYYR
                     PKAFIFENVKGLLRKSFADYFEYILLRLTYPNLGILQNEDWKGHLTRLKEIEFNLYKG
                     IKYKVSYQLLNAADYGVPQKRERVVIVGIRADLDIDWKFPKRTHSEDRLNWEKYVTGE
                     YWEKHNEPKRFNKDIAEKLQKKYGIFEPEKKPWQTVRDTLSDIPHPLGNHKITGHEYR
                     DGARIYPGHTGSGIDEPSKTIKAGGHGVPGGENMIRYDDGTVRYFTSYEAKLLQTFPE
                     EFVISGAWGEAMRQIGNAVPVKLSEILGKHLMGVLSEKSSLHN"
BASE COUNT         2891 a         3077 c         2565 g         2452 t
ORIGIN      
        1 ttgctttata tcaagtttgc cggcttaggc gaattgccgt gtaaaaccga caaactcctc
       61 ttttttcgcc ttcgccctac ctgaatcgat gccttcccgt gcggcagata tgccgtctga
      121 aagcgaagca gcgatatttc cggcatataa ggcggcggcg gtattaagca atacgatatc
      181 gcgcgccgcc ccttctttcc cgtccagtac ctcgttcatt ttcaacaaag attcctgagt
      241 attggcaact ttgatttcat ccaaattgcg gcgggtttcg ataccgaaat cttctgggcg
      301 gatgtcgtat tcgctgattt ttccgtcttt gagttcggca acgcgcgttt tgcccgtcag
      361 tgtaatttca tccaaaccgc cctccccgca aacgaccaaa acgtgttttg agccgagttg
      421 ttgcaagacc cgcgacaaaa tgccgcacaa atcggtgtgg aacacgccca aaagctggtt
      481 cggcgcgccc gcaggattgg ttaacggacc caatatgttg aaaatgcttc ggaaaccgag
      541 cgaacggcgc accggggcga catggcgcat ggcactgtgg tgattgggtg cgaacataaa
      601 ccctataccg gtctgcctga tactttgggc aatctgttcg ggagtcaggt tgaggtttgc
      661 gcccatttgc tccatcacgt cagccgcacc gctggaggaa gagaccgacc ggcctccgtg
      721 tttggcaacc tttgcgcctg ccgctgcagc aacaaacatc gaagtcgtcg aaatattgaa
      781 ggttttcgcg ccatccccgc ccgtaccgac gatatcgacc agcccgtccg catcctccag
      841 cggcactttt gacgcaaact cgcacatcac ggcggcggcg gcggtgattt cggaaacggt
      901 ttcaaccttg atacgcaagc cggtcaaaat cgccgcaatt tgttcgggcg gcacttttcc
      961 gctcatcatt tggcgcatca agtcggtcat ttcatcgtaa aacaactcgt tattgctgat
     1021 taatcgttcg atagcctgtt gcggtgtaat cattttttgt cctccgttca atattcggac
     1081 gaaaatgccg cccgaagggc ttcagacggc atcacgtcag attttttgcg gtttgaagtt
     1141 ttgaaattca actaaaaaat tgttcaacat atcatgtccg cgttcggtca agagggcttc
     1201 ggggtggaac tgcacgccct cgacggcata ttccttatgg cgcacgccca taatttcgcc
     1261 gtcttccgtc cacgccgtga tttccaagca atccggcagc gtgccgcgtt cgataacgag
     1321 gctgtgataa cgcgtacagg taaccggatt gggcaaaccc ttaaacatac ccttgcccga
     1381 atgggacacg ggcgacacct taccgtgcat caaggttttt gcccgtacca catctccacc
     1441 gaacgcttcg cctatcgtct gatgcccgag gcacacgccc ataatcggca gccggccggc
     1501 aaaatggcgc atggcttcta ctgaaatacc cgcctcctta ggggaacacg gtccgggacc
     1561 gataacgaga tattgcggat tcaatgcctc gatttcctcc aacgtaatat catcgttgcg
     1621 gcgcacggcg acttcctgcc ccaattctgc gaaatactgg acgatgttgt aagtaaaact
     1681 gtcgtaattg tcgataaaca aaagcatttt gtgattaacc tattgattta taatttgttt
     1741 attattaact gcatttccga tacccccatc cataccccct tatatcttag cgtgcccgat
     1801 gcgccctcgt gaatctggcg cagagcctcg cgttctgaca agtacgccat tttgccacct
     1861 tttcgaccgt tcgggaacgt accgttttta tgccctcata aattttggtt atccgatagc
     1921 taacatatag cggcgttcgt gttcacatca ttaacttccc taaaattagg gttaatacaa
     1981 attaacgcca ttaaatatca caaccgtgtc atttgaaaaa cttttgccta tgccctctga
     2041 gtattctcaa aatcttatga tataaaaaat gcaatgttat ataataacaa acttttgaaa
     2101 tgcgacgaga agccaaaatg gcacaaatca cactcaaacc cattgtttta tcaattcttt
     2161 taatcaacac acccctcctc gcccaagcgc atgaaactga gcaatcggtg ggcttggaaa
     2221 cggtcagcgt cgtcggcaaa agccgtccgc gcgcgacttc ggggctgctg cacacttcga
     2281 ccgcctccga caaaatcatc tccggcgata ctttgcgcca aaaagccgtc aacttgggcg
     2341 acgctttgga cggcgtaccg ggcattcatg cctcgcaata cggcggcggc gcatccgctc
     2401 ccgttattcg cggtcaaacg ggcagacgga ttaaagtatt gaaccatcac ggcgaaacgg
     2461 gcgatatggc ggacttttct cccgatcacg ccattatggt agataccgcc ttgtcgcaac
     2521 aggttgaaat cctgcgcggg ccggttacgc tcttgtacag ctcgggcaat gtggcggggc
     2581 tggtcgatgt tgccgatgga aaaatccccg aaaaaatgcc tgaaaacggc gtatcgggcg
     2641 aagccggatt gcgtttgagc agcggcaatt tagaaaaact gacatccgca ggcatcaata
     2701 tcggactggg caaaaacttc gtgctgcata ccgaaggctt gtaccgcaaa tcgggcgatt
     2761 acgccgtacc gcgttaccgc aatctgaaac gcctgcccga cagccatgcc gattcgcaaa
     2821 cgggcagcat cgggctgtct tgggtgggcg aaaaaggctt tatcggcgca gcatacagcg
     2881 accgtcgcga ccgctacggc ctgcctgccc acagccacga atacgatgat tgccacgccg
     2941 acatcatctg gcaaaagagt ttgatcaaca aacgctattt gcagctttat ccgcacttgt
     3001 tgaccgaaga agacatcgat tacgacaatc cgggcttgag ctgcggcttc cacgacggcg
     3061 acggtgcaca cgcacacacc cacaacggca aaccgtggat agacctgcgc aacaaacgct
     3121 acgaactccg cgccgaatgg aagcagccat tccccggttt tgaagccctg cgcgtacatc
     3181 tgaaccgcaa tgactaccac cacgacgaaa aagcaggcga tgcagtagaa aacttcttca
     3241 acaacaaaac acacaacgcc cgtatcgagt tgcgccacca acccataggc cgtctgaaag
     3301 gcagctgggg cgtgcaatat ttgggacaaa aatccagcgc gctttccgcc attcccgaaa
     3361 ccgtccaaca accgatgttg attgacaaca atgtccgcca ttacagcttt ttcggtgtag
     3421 aacaggcaaa ttgggacaac ttcacgcttg aaggcggcgt acgcgtggaa aaacaaaaag
     3481 cctccatccg gtacgacaaa gcattgattg atcgagaaaa ctactacaac cagcccctgc
     3541 ccgacctcgg cgcgcaccgc caaaccgccc gctcgttcgc actttcgggc aactggtatt
     3601 tcacgccaca ccacaaactc agcctgaccg cctcccatca ggaacgcctg ccgtcaacgc
     3661 aagaactgta cgcacacggc aagcacgtcg ccaccaacac ctttgaagtc ggcaacaaac
     3721 acctcaacaa agagcgttcc aacaatatcg aactcgcgct gggctacgaa ggcgaccgct
     3781 ggcaatacaa tctggcagcc taccgcaacc gattcggcaa ctacatttac gcccaaacct
     3841 taaacgacgg acgcggcccc aaatccatcg aagacgacag cgaaatgaag ctcgtgcgct
     3901 acaaccaatc cggtgccgac ttctacggcg cggaaggcga aatctacttc aaaccgacac
     3961 cgcgctaccg catcggcgtt tccggcgact atgtacgagg ccgtctgaaa aacctgccgt
     4021 ccctacccgg cagggaagat ccctacggca aacgtccctt catcgcgcag gacgaccaaa
     4081 acgccccccg cattccggct gcgcgcctcg gcttccacct gaaaacctcg ctaaccgacc
     4141 gtatcgatgc caatttggac tactaccgcg tgttcgccca aaacaaactc gcccgctacg
     4201 aaacgcgtac gcccggacac catatgctca acctcggtgc aaactaccgc cgcaatacgc
     4261 gctatggcga gtggaattgg tacgtcaaag ccgacaacct gctcaaccaa tccgtttacg
     4321 cccacagcag cttcctctct gatacgccgc aaatgggccg cagctttacc ggcggcgtaa
     4381 acgtgaagtt ttaaaatcgg acaggcaaac aaaaaaggtt ttcagacggc attatgaaaa
     4441 cctttttttc tttttaatca acttgttagg aaatatggca aagacaagga acaaaccact
     4501 gtgccatcat tcccattttc tttgtttcat cattcttgct ttcacgccgt cattctcgca
     4561 aaagcagaaa aatcaaaagc aaaaacccaa gatcccatca ttcccgcgca ggcgggaatc
     4621 caattcattc ggtttcagcc gtttccgata aattaccgta acgttaagtt cccggattcc
     4681 cactttcgtg ggaatgacgg cgtaaaggtt tctgtttttt aagttttagg taactaatga
     4741 gtcgtcattc ccgcgcaggc gggaatccaa ttcgttcggt ttctgttatt tctgataaat
     4801 caccgtaacg ttaagttccc ggattcccat tttcgtgaac ataacggtgt gaacattagc
     4861 aaaaattcaa aaaaccaaac ttcctcattc gtgtgaatga tggtactgat attttctatt
     4921 tcagttcgca aaattaatct ttcaacacat cttgcacagc cgcctgaatc ttagccgccg
     4981 ccgcttcgat ttgctgctgt tcggcagatg ggtttgccgc tgtttcaacc gaagcagctt
     5041 gtgaaacagg atcggcttga gaatcagtca gcggcaaacg cgccaatacg gtttttacgc
     5101 cggttacttt atcaccaatc gccacttgtg cctgcgcatc gacaggcaga tacacatcca
     5161 cgcgcgaacc gaagcggata aagccatagc gttcgccgcg ggacagtttc gcacctgctt
     5221 gggtgtaaca caaaatacgg cgtgccacca gaccggccac ttgaacaaaa gtaatttcac
     5281 gaccggaagc cgtagtcgcc aaaaccgcgt tgcgttcgtt ttccgtgctg gctttgtcca
     5341 aatccgcatt cacgaatttg cctttgttat agaccacttt cgttaccgta caatcggcag
     5401 gcgatttttg cgaatgcacg ttgaacacgt tcataaaaat actgattttc aaagcatcga
     5461 catcacgata cggatcgcgt gcgcgctcga ccaccacgat acggccgtca accggactca
     5521 acaccgcttc aggattttgc ggaatttcac gcgcagggtc gcggaaaaac tgcaatgcaa
     5581 atacggtaaa cacccaaaac ggcaaagacc accagccgca gcacatcgac accagcaggc
     5641 tcaaagccaa accgccgccg ataatcggcc agccctcacg ggcgataatc gggtggggat
     5701 aaagacggtt catttgtcat ccttttattc aaatatatta aatagcgaca ttataacgga
     5761 atccgccgcg ttccgccgac aaatgccgtc tgaacgcggc ttcagacggc atccgagaaa
     5821 gtgctacaat atcggttttc ctttattttt tcaggcggca tccattatgt gcaaccatca
     5881 tccccgacat tcgcacgaca acgacaccat ccgcattcgc ggcgcgcgca cgcataattt
     5941 gaaaaacatc gatttggaca ttccccgcca caagctcgtg gtggtaacag gattgtcagg
     6001 cagcggcaaa tcatcgctgg cgtttgatac tttatatgcc gaagggcagc ggcgttatgt
     6061 cgagagcctg tctgcctatg cgcggcagtt tttgcagatg atggacaaac ccgatgtcga
     6121 tttgattgaa ggcctgtcgc ctgcgatttc catcgagcag aaatccacca gccacaatcc
     6181 gcgttccacc gtcggcacgg taacggaaat ccacgactac ctgcgccttt tatacgcccg
     6241 tgtcggcacg ccgtattgcc ccgaacacaa tttgtcgctg tcgagccaaa ccgtgtcgca
     6301 gatggttgat gccgtgttga agctgccgga agatacgcgc gtgatgattc tggggccggc
     6361 ggtgcgcgag cgtaaaggcg aatttgtcga tttctttgcc gacttgcagg cgcaaggctt
     6421 tgcccgtgtg cgcgtggacg gcgaagtcta tcagcttgac gaagtaccga agctggaaaa
     6481 aaacatcaaa cacaatatcg acgtcgtcat cgaccgcgtg aaagtgaaag ccgacatcaa
     6541 acaacgactg gcggaaagtt ttgaaaccgc gctgcgccac ggcaacgagc gcgcgctggc
     6601 gatggaaatg gacagcggcg aagaacattg gttttccgcg cgttttgcct gccccgtgtg
     6661 ttcgtacagc ctgcccgaat tggaaccgcg cctcttttcg ttcaacaacc cgatgggttc
     6721 ctgcccgact tgcgacggct tgggcaacac caatttcttc gaccccgaaa aagtagtcgc
     6781 ccatcccgaa ttgtcgctgg caaccggcgc gattgacggt tgggacaaac gcaaccaatt
     6841 ctatttccaa atgattcaat cgctggcgca tcattataaa tttgatgtca acgtcgcttg
     6901 ggaaactttg cctgaaaaag tcaaaaaagt cgtgttgcac ggctcgggca aagaagtcat
     6961 tgatttcacc tacctgtccg aacgcggcac caccttcaac cgcagccacg ccttcgaggg
     7021 catcatcccc aatctcgaac gccgctaccg cgaaaccgac agcgaaaccg tgcgcgaaaa
     7081 actgcgcgag taccaaaatc accgtgcctg cccgagctgc ggcggcgcac gtttgcgcaa
     7141 agaagcacgc tacgtttacg tcggcggcga accgttgcac gaagtctccg cctggccgct
     7201 gaccaaaacc caccgattct tcgaaacgct ggatttggac ggcaacaaaa aacagatcgc
     7261 cgaaaaaatc ctcaaagaaa tcaccgagcg gctcggcttc ttgattaacg tcgggctgga
     7321 ttacctgaat ctaagccgtt ccgccgaaac cctttccggc ggcgaagccc agcgcatccg
     7381 ccttgccagc caaatcggca gcggcctgac cggcgtgatg tacgttttgg acgaaccctc
     7441 catcggcctg caccagcgcg acaacgaccg cctgctcgcc accctcaaac gcctgcgcga
     7501 tttgggcaac agcgtaattg tggtcgaaca cgacgaagac gccatccgcg aagccgattt
     7561 cgtcgtcgat atgggccccg gcgcgggcga acacggcggc aacgtactga ttgccgacac
     7621 acccgaaaat gtcgccaaat gcgaaaaatc cgttaccgga caatacctcg gcggtaaaaa
     7681 atccattgcc gtgccgtctg aacgcacgcc cgtcaatccc ggccgaatgc tcgtcctcaa
     7741 aggcgcgcgc ggcaacaacc tcaaaaacgt aaccctcgag ttgccgcttg gtttgattac
     7801 ctgcatcacc ggcgtatccg gcagcggcaa atccaccctg attaacgaca ccctcgccaa
     7861 aatcactgcc cgcgaactca accgcgccca agaagagccc gccccatacg acgacatccg
     7921 cggcctcgaa cacctcgaca aagtcatcaa cgtcgaccaa tcccccatcg gccgcacccc
     7981 gcgctccaac cccgccacct acaccggcct gtttaccccc atccgcgaac tcttcgccgg
     8041 cgtacccctc tcgcgcgaac gcggctacaa cgtcggcaga ttctccttca acgtcaaagg
     8101 cggccgctgc gaagcctgcc aaggcgacgg cgtaatcaaa gtcgaaatgc acttcctgcc
     8161 cgacgtgtac gtcccctgcg aagtctgcca cggcaaacgc tacaaccgtg aaaccctcga
     8221 aatccaatac aagggcaaaa acatcagcca agtcctcgac atgacggtcg aagaagcccg
     8281 cgaatttttc gacgccgtcc ccaccgtatc gcgcaaactg caaaccctga tggacgtagg
     8341 tctcggctac atccgcctcg gccagtccgc caccaccctc tccggcggcg aagcccagcg
     8401 cgtcaaactc gccttggaac tctccaaacg cgacaccggc agaacgctct acatcctcga
     8461 cgaacccacc accggcctgc acttcgccga catcgccctg ctgctggaag tcataggccg
     8521 tctgaaaggc aaaggcaact cgattgtgat tatcgagcat aatctggatg taattaaaac
     8581 cgcggattgg attgtggact tagggccgga aggcggcgat ggtgggggta aggttatcgc
     8641 gaaaggtagc cctgaggaag tggcgaaggt taaggggagt tataccggga agtatttgaa
     8701 agtggttttg aagtaaacga acggatatag aaaatgaaca ataattttga ccgcagcaag
     8761 catatctatc ataacgaagc ttttgtagaa ctggttaaag atgccatacg cttttttcat
     8821 ggtacgcctg ttcatacact tcctccaccc aaacagttca aaggtgcagg ggtttatgcg
     8881 atttactata tcggtaacaa tcctttgtac aaacaatatg cggactggaa cagattatcc
     8941 tacaatgcgc caatttatgt tggcaaggcc gtccccaaag gctggcggca agcaagaaat
     9001 tctgataatg cgctaaacca atcaaccgaa ctgttccacc ggttgaaaga acacagcagg
     9061 agtattgccg ctgtttctga tttagatcct tccgatttca tgtgcagatt cgttatcttt
     9121 gaaggtgccg gttctgacat gataggcaca atcgaagctg ccctgattaa attacacaaa
     9181 cctctatgga actcttgtgt cgatggtttc ggaaaccacg accccggaaa aggccgttac
     9241 gaacaagcca aatcggattg ggatgtcctt catagcgggc gggtttgggc agataggcta
     9301 aacggcatac cgaatagcta tgagtccata cttgaaaata tcaacacaca tttagagata
     9361 ataaagagaa aataacctat gaagtctttg gaaatttttt ccggcgcggg cgggttggca
     9421 aaaggccttg aacttgcagg attccaacat gcatctttta ttgaactcaa taaagatgca
     9481 tgcaattctt taagaagcaa ctttaacccc aagcttgttt atcagggaga tgtggcagat
     9541 tttgatcttt ccagtcaaga aggcatagaa gtcattgcag gcggtcctcc ttgccagccc
     9601 ttttcattgg gcgggaaaca ccttgcccat gaagacagaa gggatatgtt tcctcatgcg
     9661 gtcagatatg tggagtatta ccgccccaaa gcttttatct ttgagaatgt aaaaggactt
     9721 ttaagaaaat cattcgctga ttattttgaa tatatcctac ttcggcttac ttatccgaat
     9781 cttggtattt tgcagaatga agattggaaa ggccatctga cacggctgaa agaaattgaa
     9841 ttcaatttat ataaaggaat caaatataag gtttcatatc aattgttgaa tgcagctgat
     9901 tacggagtgc cgcaaaaacg cgaacgcgtg gttatcgtag gtatccgggc cgatttggat
     9961 attgattgga aattcccaaa aagaacacat tccgaagaca ggttgaattg ggaaaagtat
    10021 gtaacggggg aatactggga aaaacacaac gaacccaaaa gattcaataa agatattgct
    10081 gaaaagttac aaaaaaaata cggtatattc gaaccagaaa aaaaaccttg gcaaacggta
    10141 agggatacct tgtccgacat cccgcatcct ttggggaatc ataaaattac aggacatgaa
    10201 tatagggatg gcgcaagaat ttatcccgga cacacaggaa gcgggataga cgaaccgtcc
    10261 aaaaccatta aagcaggtgg gcatggcgtt cccggcggag aaaatatgat tcgttatgat
    10321 gatggaacag tcagatactt taccagctat gaagcaaaac ttcttcaaac attccctgaa
    10381 gaatttgtca tttctggagc ttggggagaa gcaatgcgac aaattggcaa tgcggttcct
    10441 gtcaaattgt cggaaatttt aggcaaacat ctgatggggg tgttgtcgga gaaaagcagc
    10501 ctgcacaact aacccgccca ctgcgtgtgt gcggtacgca cgcggttgct tgattgacgg
    10561 tttgccgttt caacttttaa cttcgttgaa gctagtgctt tcagacggcc tccaatgtcg
    10621 tttggaaaca tcaggtccaa caaagttaaa ccttaaacaa caaaccattc cttctccaac
    10681 acccaaacca caaacaaaaa tcctatggcg cgttatcgca gaaacttcat tgccggcggc
    10741 acattctttt tcaccgtcaa acccgccgcc ccgaaatcgc gtctgcttgt cggacatatc
    10801 ggcttcgcgt gcggcttata tggatgtgca aaaacaatat ccctttgaaa ccgtcgccgt
    10861 atgcgtgctg ccgaaccata ttcacgccat ttggacgctg ccgcccgacg atgcggatta
    10921 ttccctactc cggcggctga ttaaaaccaa attctccgca tattcccctc atactaaaaa
    10981 cttag
//
LOCUS       DAXGCP010000076        10820 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.076, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000076 DAXGCP010000000
VERSION     DAXGCP010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10820
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.076"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            76..657
                     /locus_tag="ACFJCW_001680"
     CDS             76..657
                     /locus_tag="ACFJCW_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HFC4151774.1"
                     /translation="MFNDNPVVYGKIKLQSWKARRDFNIVKQDLDFSCGAASVATLLN
                     NFYGQKLTEEEVLEKLGKEQMRASFEDMRRIMPDLGFEAKGYALSFEQLAQLKIPVIV
                     YLKYRKDDHFSVLRGVDGNTVLLADPSPGHVSMSRAQFLEAWQTREGNLAGKILAVVP
                     KKAEAISNKLFFTHHPKRQTEFAVGQVKWWRAY"
     gene            786..2447
                     /locus_tag="ACFJCW_001681"
     CDS             786..2447
                     /locus_tag="ACFJCW_001681"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HFC4151775.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VAEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENMGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GVGKDGGPTDSFQPGMELWARQTLFAEGCRGSLSKQIIERFQLDQNSQPQTYGLGIKE
                     VWEVPSEQHQPGLVVHSAGWPLDSKTYGGAFIYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENFEEVESFDSGKEAGNYQKLFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSLYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAPVCKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIIE
                     ENGSPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(2581..3075)
                     /locus_tag="ACFJCW_001682"
     CDS             complement(2581..3075)
                     /locus_tag="ACFJCW_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HFC4151776.1"
                     /translation="MKKTLLAIVAVFALSACRQAEEAPPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTVKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWIDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDA
                     YIFK"
     gene            complement(3072..3902)
                     /locus_tag="ACFJCW_001683"
     CDS             complement(3072..3902)
                     /locus_tag="ACFJCW_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HFC4151777.1"
                     /translation="MNPVWIITGKEARDSLRNRWVLAAVLLLAALALSLGFLGSSPTG
                     SVKVDPLTVTVVSLSSLSIFLIPLIAMLLSYDALIGEIERGTMALLLSYPIWRNQILA
                     GKFVGHLIILALATTAGYGLAGITLQLANGGFDIAVWKPFALLIAASVILGAAFLSMG
                     YLISAKVKERGTAAGISIGVWLFFVVIFDMALLGILVADSKQVITAPVVETVLLFNPT
                     DIYRLLNLTGYENTAMYAGMAGLSGQIGLTVPVLLTAQVLWVIIPLVLAAGIFRKRRI
                     "
     gene            complement(3899..4795)
                     /locus_tag="ACFJCW_001684"
     CDS             complement(3899..4795)
                     /locus_tag="ACFJCW_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HFC4151778.1"
                     /translation="MTTHHVELRKVTKRFGAQKAVSQVDLVLKAGESVGLAGHNGAGK
                     STIMKLILGLITPTEGEVMLLGERTGSKAGARLRSQIGYLPETVALHPSLTGIETLDF
                     YAKLKKQPLTQNRGLLERVGISQTAHRRVGTYSKGMRQRLALAQALLGEPKVLLFDEP
                     TTGPDPASRQMFYEVVRELNGRGATVLLSTHALAELDGHADRIVVMKNGVKVADGSMD
                     ELHVQSGLPLTVNIRLNAPRTLSSRWQPLSDGISYRAQCQAEERMELLGELGSLSDLA
                     YFDIHTPTLDEMYARFLKREDV"
     gene            complement(4853..6007)
                     /locus_tag="ACFJCW_001685"
                     /pseudo
     CDS             complement(4853..6007)
                     /locus_tag="ACFJCW_001685"
                     /inference="COORDINATES: protein motif:HMM:NF016906.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
     gene            complement(5941..6096)
                     /locus_tag="ACFJCW_001686"
                     /pseudo
     CDS             complement(5941..6096)
                     /locus_tag="ACFJCW_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
     gene            complement(6381..8348)
                     /gene="nosZ"
                     /locus_tag="ACFJCW_001687"
                     /pseudo
     CDS             complement(6381..8348)
                     /gene="nosZ"
                     /locus_tag="ACFJCW_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712466.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0005509 - calcium ion binding [Evidence
                     IEA];
                     GO_function: GO:0050304 - nitrous-oxide reductase activity
                     [Evidence IEA];
                     GO_process: GO:0019333 - denitrification pathway [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TAT-dependent nitrous-oxide reductase"
     gene            complement(8477..10783)
                     /locus_tag="ACFJCW_001688"
                     /pseudo
     CDS             complement(8477..10783)
                     /locus_tag="ACFJCW_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753899.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
BASE COUNT         2507 a         2836 c         2958 g         2519 t
ORIGIN      
        1 tatcttcata tttcgagggt aacatatctg ctaatctggt acagaccctt gtcttatcgt
       61 ttgaatgctg caccgatgtt taacgataat cctgttgttt acggaaaaat caaattgcag
      121 agttggaaag cgcggcggga tttcaatatt gtaaagcagg atttggattt ttcctgcggg
      181 gcggcttcgg tggcgacgct tttgaacaat ttttacgggc aaaagctgac ggaagaagaa
      241 gtgttggaaa aactgggtaa ggaacagatg cgcgcgtcgt ttgaggatat gcggcgcatt
      301 atgcccgatt tgggttttga agcgaaaggc tatgccctgt ctttcgagca gctcgcgcag
      361 ttgaaaatcc ccgtcatcgt gtatctgaaa taccgcaaag acgaccattt ttcggtattg
      421 cgcggagtgg atggcaatac ggttttgctt gccgacccgt cgccgggtca tgtttcgatg
      481 agcagggcgc agtttttgga ggcttggcaa acccgtgagg gaaatttggc aggcaaaatt
      541 ttggcggtcg tgccgaaaaa agcggaggcg atttcaaata aattgttttt cacacatcat
      601 cccaagcggc agacggagtt tgcagtcgga caggtaaaat ggtggcgtgc ttattgaaat
      661 ttcgacaaag gtcgtctgaa aaccgaaaac atggtttcag acgacctttg ttgtatttgg
      721 taactatatg ttcccgttgt ataatcacgg atttgcaatt caataataaa tacacaggaa
      781 ccgccatgac agaatccatc acccgcgaca gtatgcaata cgatgtcgtg attgtcggcg
      841 caggcccgtc ggggttgtcc gccgccatca aactcaagca gcttgccgaa cagaacgggc
      901 gcgaaatcag cgtttgcgtg gcggagaagg gttcggaggc gggggcgcat tcgctggcgg
      961 gcgcggttat cgatccgatt gcgctgaatg agctgattcc cgactggaaa gaaaaaggcg
     1021 cgccgctgac gcgcacggta actcaggaca aagtgttgtt cctgacggag aaaaaagcgt
     1081 tcaatctgcc tattaccccg aatttcgaca atcacggcaa ctacatcgtc agcttaggcg
     1141 aagtcgtgcg ctggttggcg gagcaggcgg aaaatatggg cgtggaaatc tatccgggct
     1201 ttgccgccgc cgaagtgctg tatcacgaag acggctcggt caaaggtatt gcgaccggca
     1261 atatgggtgt aggcaaagac ggcgggccga ccgacagttt ccagcccggc atggagcttt
     1321 gggcgcggca aaccctgttt gccgaaggtt gccgaggttc gctttccaag caaatcatcg
     1381 aacgtttcca actcgaccaa aacagccagc cgcaaactta cggcttgggc atcaaagaag
     1441 tttgggaagt gccgtctgaa cagcatcagc ccggtttggt ggtgcatagc gcaggctggc
     1501 cgctggacag caaaacctac ggcggtgcgt ttatttacca tttcgacgac aacaaagtcg
     1561 ccgtcggctt cgtggtcggt ttggactatc aaaacccgta tctgtcgccg tttgaagagt
     1621 tccaacgttt caaaacccat cccgaaatcc gcaaaacctt tgaaggcggc cgccgcattg
     1681 cttacggcgc gcgttcgctg attgaaggcg gtttgcaaag cctgccgaag ctctcgttca
     1741 aggggggcgt tttaatcggc gatgcggcgg ggttcctcaa tatgccgcgc atcaaaggca
     1801 ttcataccgc gatgaaatcc gccatgctcg ccgccgaagc cgtgttcccc ttgttggaaa
     1861 actttgaaga agtggaaagc ttcgacagcg gcaaagaagc gggaaactat caaaaactgt
     1921 ttgaacaaag ctggctgtat caagagcttt atgccgcgcg caatgtccgt ccgtcattca
     1981 aatggggcgt ttacctcggc tcgctttata ccggcatcga ccagatgatt ttcagaggca
     2041 aagccccgtg gaccttgaaa catcacggca aagacaacga gcagctcaaa aaagcccccg
     2101 tgtgcaagcc gattgattat ccgaaacccg acggtgtgtt gacctttgac cgcttgagca
     2161 gcgtcttcct tgccaatctc gcgcacgaag aaaaccagcc cgaccatttg gtgctgaaca
     2221 atccgcaaac gatgatagac gtgaactata aagaatacgc ctctcccgaa acgcgctatt
     2281 gtccggccgg cgtatatgaa atcatcgaag aaaacggcag tccgcgcctg caaatcaacg
     2341 cggcaaactg cgtgcactgc aaaacctgcg acatcaaaga cccgacgcaa aacatcactt
     2401 ggatttgccc cgaaggcgca agcggaccga attacggcgg gatgtaaacc tcattccgcc
     2461 gttacgcccg gtcaggaata aggaatgggg cagttgttcg aacctgcccc gtttgaacct
     2521 atgacaaaaa atgccgtctg aaccttggct tcaacgttca gacggcattt ctgtttggat
     2581 ttacttgaaa atgtaagcat cgggcatatc gtcaaaaccg acgaccttgc cgcctttatc
     2641 ctttgcaaat ttttcagcct gctccttgtt gccgaacggc agcgcgtctt ccgcgcccat
     2701 accgccgata aagccgctgt cgatgacgta aaaggctttt ttcgcatcta tccactccgt
     2761 gtcggcatta ggattcgtcc aatcggtaac attgcccata tcggtaacgt aaatcacgcg
     2821 gatgcctttg ggctcttcgg gcagtttggt atagccgaac atctgcttga cggtggagaa
     2881 ccaaacgggc tgatcgggtt tgccgttcaa aaaaatctgg gctttggggc cgttgtgttc
     2941 ggtcaggttc atactgcaat agtgtccgac cgaacggtcg ctaatctgcc ggggtaaagg
     3001 cggcggtgcc tcttccgcct gccggcaggc acttaaggcg aaaacggcaa caattgccaa
     3061 cagggttttc ttcatattcg tcgctttcta aaaattccgg ctgccaaaac aagcggaatg
     3121 ataacccata aaacctgcgc ggtcagcaaa acggggacgg tcaggccgat ttgtccgctc
     3181 aaacccgcca tacccgcata catagccgta ttttcgtaac cggtcaggtt gagcaggcgg
     3241 taaatgtcgg tgggattgaa cagcagcacc gtttcaacga cgggcgcggt gatgacctgt
     3301 ttcgagtcgg caaccagaat acccaaaagc gccatatcga agatgacgac gaaaaacaac
     3361 catacgccga tggaaatacc ggccgccgtc ccccgctctt tgacctttgc actaatcaag
     3421 tagcccatag acagaaatgc cgcacctaaa atcacgctgg cggcaatcaa cagcgcaaag
     3481 ggtttccaaa cggcgatgtc gaaaccgccg ttggcaagtt gcagcgtaat gcctgccaat
     3541 ccgtaacctg ccgtggtggc aagggcgagg atgatgaggt gtccgacaaa cttgccggca
     3601 aggatttggt tgcgccaaat gggataactc aacagcaacg ccatcgtacc gcgttcgatt
     3661 tcgccgatca gtgcgtcata agaaagcagc atcgcaatca gcggaatcag gaaaatagac
     3721 aggctcgaca ggctgacgac ggtaacggtc agcggatcga ccttgaccga accggtgggc
     3781 gagctgccga ggaaacccaa agaaagggcg agtgcggcaa gcaggaggac ggcggcaagc
     3841 acccagcggt tacgcaggct gtcgcgggct tctttgccgg taataatcca aacggggttc
     3901 atacgtcctc ccttttcaag aaccgtgcgt acatttcgtc aagcgtcggc gtgtggatgt
     3961 cgaaataggc aaggtcggac aggctgccca attcgcccaa cagttccata cgttcttcgg
     4021 cctgacattg cgcccggtag gaaatgccgt ctgaaagcgg ctgccagcgg ctgctgaggg
     4081 tgcgcggcgc attgaggcgg atattgacgg tcagcggcag cccgctttgg acgtgcaatt
     4141 cgtccatact gccgtcggca accttaacgc cgtttttcat cacgacaatg cggtcggcgt
     4201 gtccgtccaa ctcggcaagg gcgtgggtac tgagcaatac ggtcgcgccg cgcccgttga
     4261 gttcgcgcac gacttcgtaa aacatttgtc gtgatgcagg gtcggggccg gttgtcggtt
     4321 cgtcaaacag caggactttg ggctcgccca gcagggcttg tgccaaggca aggcgttggc
     4381 gcatcccttt agaataagtg ccgacgcggc ggtgtgcggt ctgggaaatg ccgacgcgct
     4441 caagcagccc ccggttctgc gtgagcggct gttttttaag tttggcataa aaatccagcg
     4501 tttcgatgcc ggtcagcgaa gggtgcagcg caacggtttc gggcaggtag ccgatttggc
     4561 tgcgaagccg cgcccccgct ttgctgccgg tacgttcgcc caaaagcatc acttcgcctt
     4621 cggtcggggt aatcagcccg agtatcagct tcatgatggt ggacttgccc gcgccgttgt
     4681 gtccggcaag cccgacgctt tctcctgcct tcaaaaccaa atcgacttgg ctgacggctt
     4741 tttgcgcccc gaaccgtttg gttaccttcc tcaattcgac atgatgtgtg gtcatggttg
     4801 ttccttttgt gttttcagac ggcatttgaa tccgggtgcc gtctgaagca gactagttca
     4861 aagaaccgtt ttccgccctg ccccgttccg actgccgcgt ttcggcttct ttgagcaact
     4921 cgtccttcat cgcctgataa cgggtttgaa ttttgggggc ataaggcttc atcagcggtt
     4981 tgctgtccac cacgccgccg ggcagaacgg cgggaaactg cgcctgcgcc catttgacga
     5041 tgctgattgc gggactgttc atcaagaggc gcgatacggg cgcgcgccag atgatttggt
     5101 cgatgatgcc gtcgggacgg tacgcgctgt ctccgaagcc gtcgccgttc aaatcgaacg
     5161 ggctgttgtc gctccagtag ttgccgtgtc cgccctcgct ccagtcgaga aagcgcgtac
     5221 tgacatattt gacctggctt ccgttgttga taaaggaatt gtcgtgcagg gacgtgcctt
     5281 cgatggcggc ggtaaagtgc atgccgattt ggcagttttc aaaatgattg gcggacagtt
     5341 tatcgtagtt ggcattgtag gcaaaaacgc acttgcccgc tttgttgata atattgtcgt
     5401 gaatatcgga atagttgaca tagttgagca tgatgcccta atcgcggctg ccgacggcga
     5461 tattgtcgaa cactttgagc cgttcggaaa acatcagcac atagcccata ttgttgccca
     5521 cgcaaatatt gccgctgact tcgctgtcgt tggtgtacat atagtggacg gcgaaacgca
     5581 ggtcgctgaa gcggttgttt ttataggtgt tgtgcgtgct ggtattggaa aaaatgccgt
     5641 cccgcccttt ggaaatgtcg ttgccgacga cctgcgcgcc gggcgcgttc caaacggtaa
     5701 cgccattgcc gcgctcattc acgcgcaagg tcgcatcgcc gacgatttta ttctcgcgca
     5761 ccatcgcatc ggcagaacca tgaaggtata cgccgaacga attatcaaaa atattgttgt
     5821 gttcaatcag ggcgcgcggg gcggcttttt cgagataaat accggcatcc attgctggca
     5881 ggctcatacc ggaacgggta acggtcaggt tgcggagcgt tacgtccggc gcgtgtacgg
     5941 ctatggtacg cccgctcttg tccccttcga tggttgcgga acggtcggca ggcccttcaa
     6001 tcgtaatcgg tttgtcgata taaagtttgg tttgatatac gccggaagcc agtttgatcg
     6061 tatcgcccgc ccgggcgcgg gcaaaaattt cggcaaggtt gtcttgcggg gaaacgtgga
     6121 cgacggctgc cgatgccgtc tgaaaaatgc tgccggcggc aagtatcagc acggccttca
     6181 gccatatacg gagcgcggat gtgtgcatag tgtccctctg tttcgttcgg tatggccgaa
     6241 caaaataaag catcattcaa atgtgcctgt ttttatagcg aaaccgcctg aaacggtacg
     6301 gcaagcggtt tggctataaa tgccgtctga agacctgttg ccttcagacg ccattctcca
     6361 tattcagccg tcgggccgca ttatttggga tgaacaatca tctgaccgga catttccata
     6421 tgcaatgcgt ggcagaacca ttggcagtag taccagtgca cacccgggcg gacggctttg
     6481 aaggttacgg aagaagtggc ttgcgggccg atttccatag cgatgccgca gccttccaaa
     6541 gtgaagccgt gggtcaggtc ctcgatggtt tcgacgttgg taacgtaaac ggttacttcg
     6601 tcgccttggt tcacttcaaa ctgcgggata ctgtaagcag gcgcgacggc cgtcatatac
     6661 acgcgtactt tgttgccttc gcgtacggct ttggcggctt tttccagctc gacaccgtct
     6721 tttttcgcct gttccaaagc atcctgctag aaccacgggt ctttgcggtc ccaagttttg
     6781 cccgggttca gtttggacgc ggcaaccaaa cacaagtcgt gcggttcggc aaaagtcggg
     6841 ttgtcgtgta ccagacgcat ttcgtcgccg gagatgtcga tcaattggtc gcactcgggt
     6901 ttcaaaggac cggcattcaa gaagcggtct ttggagaatt tgttcaagga caccagccat
     6961 tgaccgtcgg cttctttggt ttcgcccatg gtcgtatggt tgtgacccgg ttgatagtga
     7021 acgtcgagtt tttgtttgat cggatcgatt ttctcgcctt tgtaggcttt gatcgcatcg
     7081 tcaatattcc atttcaccat ttggctgtcg ataaacaatg tcgtataagc attgccgcga
     7141 ccgtcgaatg cagtgtgtaa cgggccgaga cccagttgcg gttcggctac gaccacatcg
     7201 cgctctttga ttttgccggc gaacaaatcg tccagtttgc tgacatccaa tacggtaacg
     7261 gttggaggca gtttaccgtt gggcatgatg tatttaccgt cagggcttgc gttacagccg
     7321 tgaggagagt tcggcacagg gatataacgc gtgtatttgg atttggcctc agcgcggccg
     7381 tccagcattt tcacaccgtt aacttctttg aagtcgcccg ctttgatgcc ttcttcgatg
     7441 gctttcaggt cgaaaacgac gcaccagtcc tgctcgttgg aagacgcacc ttgtacggtc
     7501 agcgcgcgct cggagttgta gcaggtggca aaagaatatt tgccttgata gtcggcatcg
     7561 ccgttgtcca ggttaccgtc aaccaatact tgccatgcga tctccatggt ttcgccgtcg
     7621 atggcggtgt acactgcatt ccaggttttc gcatcatcca gtttgcctac accgctgaca
     7681 ggggtaatgt gttcgccgtt ggcaaaaaca taaccggttt tcggataacg ttgcggacgc
     7741 agaccgtgaa tacctgaatc attagggatg tcgatgattt tgtcggcctt catcacatcc
     7801 aaacgcacgc ggcagacgcg gttgtttgcc ttgtcgttgg cataggcata gcggccgtca
     7861 taagtttggt cggtaaacga caggtgcggg tggtgcaagt cgccgttggg gtagcagcgc
     7921 aggccgccgt cttttaagaa tttacgggtt tcttcggtaa tattgccgtt gaggactttc
     7981 aagctctcat tggtgcgtcc ccaaccggtc gcgctgtcca tattgaacac ggggatacgc
     8041 atcagttcgc gcatagaagg cagaccgatc aggcgcatct cgccggactg gccgccggaa
     8101 aggaaaccgt aatattgatc gagttcgccc ggaccgactt cggaagacag ttggccgggt
     8161 ttggattccc cttgcgcctt ggcgacggga gccgcgccgg aagcgttagc ggcagcctgt
     8221 tcgccgtctt tagagcaacc cgccaaaccc aacaggcccg caccggcaat acctgcaccg
     8281 gaagcggcgg ccgtacctaa gaacgaacga cggctcaagc cgttttgttc taatttttcg
     8341 tctgacatac aacactcctt ggataaaata cggcaaaccg gttttcggac ggcaagccga
     8401 tgggaaaaaa attttattat ccttccgggg aaaccctgcc tgcctgacac tttggcttca
     8461 ggcttccccc ggatgcttat ttttcagatt gcgccgtttc gggtttgaca aaacggacga
     8521 cctgttcctg cggctgctta gagacatttt ccaattcccc tgatttggca gcagcctgtt
     8581 tttgtttttt cttatttgcc gccacaactt gcggacagcg cgtatcgtgg tggtacatca
     8641 cttggcagtg caggcactgg atacattcgt tcggatggat gtcgccctcg gacgcgattg
     8701 cctgaacggg gcattcgtgc gtacagattt gacaggggtt gccgcacatt ttgtagcggc
     8761 gcagccagtc gaacacgcgg aatctgcccg gcagcgcgat gcccgcaccc aaaggacaca
     8821 gataacggca gaagaagcgt tcgataaaca gccccgcaat caaaagtgcc acggcaaagg
     8881 cgacaaacca ccaatcgcac atgaatttca agataatcgc agttttgaac ggttcgactt
     8941 cggcaaattt ttccaccgta cccaaatcat acagcgaaat tgccaaaaaa ccgaagaaaa
     9001 tcaggtattt tatgacgttc aaacgggtat gcagcatatg cggtacggta atctgtttca
     9061 cacccagttt tttggcaatg cggttagtca attcctgtaa tgagccgaac ggacacaacc
     9121 aaccgcaaaa cgtccccctg ttccacagca gcatggttgc agccgtgaac agccacagga
     9181 tgaacacaat cggatccatc aggaagaatt cccaatgaaa ttcggtaagg atggcggaaa
     9241 acagcgtcag cgtattgacg accgaaagct gcgcctgtgc ataccagccg atatagaaga
     9301 gcgtaaaagt taggaaagca aagcggaagc ggtcgtacca tttttcgtaa cgcacaatcc
     9361 aatcttggaa caggaatacc aaaagcagga tggtcagcgc aatgccgacg acgacaatct
     9421 gcccctgttt cgctttccaa atctgtttcc ataattggtt ggatacaccg ttttcagctg
     9481 acgcatcttc ggcaatgccg tctgaagcgg tatcggatgc tgcggcaggt actgcttcga
     9541 caggcgcgct gatttctacg ggcggcgctt taggatcatc gacgtaataa gcttggggca
     9601 gttcgtaatc caaatcggcg gtaacgaagg ctttatcgtt cacactcaag acgcgctgaa
     9661 ccatcaatta cagccgccac ggctccgcac cgtcaaacgc tacgccttca gggatggtaa
     9721 accaagaaac ttctttaaaa cgcggcgcat cggcggcaga cagctcgacg acgcgttcgt
     9781 gttgggcatc ggtaaaacgg aagctgttct ccccctgaat catctcgata cggtcgaaaa
     9841 taccgccgcg cacatagccc gaacctttcc aagaataacg gccctctccg gcaaccaaaa
     9901 ccgcctgctg cccgggtttc agccgttttt gcagatgcgc ccagccgtcc tcacccagca
     9961 ggcttttacc gatggaaggc tggctgacca aggcaacata caaatcaata aaggtatcgt
    10021 caggatcgcc ctgttcggcg tgatcggcca cgccggcctt gccgcctttc tcaaacagtt
    10081 tgttgatttg atcaagcgtg atatgcagat ggccgacggc cttttgtttc aaaagttcgt
    10141 cccaagacaa aatatcctgc ttgtcgggat ttgccatacg gcgcggacgg gtttctgacg
    10201 caggcgcggc ttcccgaaca tcggaagcgg atgccgtctg aagggccttg tccgaaccca
    10261 gacggtattg gttggcaatg accttgtacg aacgctggat gctgtcgtta accaccatca
    10321 gtgtaacagt cgcaccgctg atgatgtcgc ccggcgccac gctcggggtc ggcggatttt
    10381 taataaaatt cagaccgata tatttgtcga tgaacttatc gacacgcgat tgcgggatac
    10441 cgatcagcat aatcggttcg tgatgatcga ccagtttcgc cccggctatc gtgccgtcgt
    10501 ttgccaaagc catcagcgta tcgatcggtt tgctcgaata accgcgcgta ttgaccgcat
    10561 cggtcgtgat ataaaccaaa ccgagctgct catcgccttt gtaaacgcgg gcaaccatag
    10621 gcttgccttc cggcttgccg taacggtccg cacccggaaa aatttccgaa ggctgtattt
    10681 tcgccagaaa atcaggcaga cgctccgcat aagcgggcag tgccgccgtc aaaaagacaa
    10741 aggcggtaaa aaacgccgtt atccgcgccc gaaacgcaga catacgccgg attgaaaaac
    10801 aggacatagc tatccccgat
//
LOCUS       DAXGCP010000077        10386 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.077, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000077 DAXGCP010000000
VERSION     DAXGCP010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10386
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.077"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            77..1411
                     /gene="gdhA"
                     /locus_tag="ACFJCW_001689"
     CDS             77..1411
                     /gene="gdhA"
                     /locus_tag="ACFJCW_001689"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HFC4151779.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFTSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSDGFVLFPDIGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWA
                     REEVDSRLFGIMQSIHESCLKYGKVGDKVNYVNGANIAGFVKVADAMLAQGF"
     gene            1506..1612
                     /locus_tag="ACFJCW_001690"
                     /pseudo
     CDS             1506..1612
                     /locus_tag="ACFJCW_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1650..2429)
                     /locus_tag="ACFJCW_001691"
     CDS             complement(1650..2429)
                     /locus_tag="ACFJCW_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HFC4151780.1"
                     /translation="MKLVRPQKISDQVLSVLEGRIVEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNILVARQILEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIRFWLEKFEEACGSGNLEHQGEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSILKDREYQSRNRHADTLAQNDLKRVQDWEV"
     gene            2779..2985
                     /locus_tag="ACFJCW_001692"
                     /pseudo
     CDS             2779..2985
                     /locus_tag="ACFJCW_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
     gene            2991..3183
                     /locus_tag="ACFJCW_001693"
                     /pseudo
     CDS             2991..3183
                     /locus_tag="ACFJCW_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003757319.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(3384..4787)
                     /gene="mtrE"
                     /locus_tag="ACFJCW_001694"
     CDS             complement(3384..4787)
                     /gene="mtrE"
                     /locus_tag="ACFJCW_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HFC4151781.1"
                     /translation="MNTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFQNDTSV
                     SSVRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANGSRQGSLSGGNVSSSYNVGLGAASYELDLFGRVRSSSEAALQGYFASVANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINRPIPEDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGSVGTGSVELGGLFKSGTGVWA
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERISYSAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTGK"
     gene            complement(4840..8043)
                     /gene="mtrD"
                     /locus_tag="ACFJCW_001695"
     CDS             complement(4840..8043)
                     /gene="mtrD"
                     /locus_tag="ACFJCW_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HFC4151782.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHAIYPGASAQVMEGSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNV
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADVGSALSAQNIQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNIYLKDVAKVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERLAVLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMILVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGAAGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFDSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATKERTDATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTASGSDAVAVAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSFEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAAGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAHEHEMAVRHASKAGITGSDDKQY"
     gene            complement(8055..9293)
                     /gene="mtrC"
                     /locus_tag="ACFJCW_001696"
     CDS             complement(8055..9293)
                     /gene="mtrC"
                     /locus_tag="ACFJCW_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HFC4151783.1"
                     /translation="MAFYASKAMRAAALAAAVALALSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVSADAISKQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGAIAVGIKFDDGTVYPEKGRLLFADPTVDE
                     STGQITLRAAVSNDQNILMPGLYVRVLMDQVAADNAFIVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGMTGAKKVTPKEWAPSENQA
                     AAPQAGVQTASEAKPASEAK"
     gene            9544..10176
                     /gene="mtrR"
                     /locus_tag="ACFJCW_001697"
     CDS             9544..10176
                     /gene="mtrR"
                     /locus_tag="ACFJCW_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HFC4151784.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQTAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAADAEGGSWTVFRHTLLHFFERLQSN
                     DIHYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSGESFDLGKTAPRIIGIMMDNLENHPCLRRK"
BASE COUNT         2510 a         2963 c         2601 g         2312 t
ORIGIN      
        1 gaaaaaaata ggtttatatt gccaactaca aatttgtttt cccattagta caatatcaac
       61 caaaaggagt atccgaatga ctgacctgaa caccctgttt gccaacctca aacaacgcaa
      121 ccccaatcag gagccgttcc atcaggcggt tgaagaagtc ttcatgagcc ttgatccgtt
      181 tttggcaaaa aatccgaaat acacccagca aagcctgctg gaacgcatcg tcgaacccga
      241 acgcgtcgtg atgttccgcg taacctggca ggacgacaaa ggacaagtcc aagtcaaccg
      301 cggctaccgc gtgcaaatga gttccgccat cggcccttac aaaggcggcc tgcgcttcca
      361 cccgaccgtc gatttgggcg tgttgaaatt cctcgctttt gaacaagtgt tcaaaaacgc
      421 cttgaccacc ctgcctatgg gcggcggcaa aggcggttcc gacttcgacc ccaaaggcaa
      481 atccgatgcc gaagtaatgc gcttctgcca agcctttatg accgaactct accgccacat
      541 cggcgcggac accgatgttc cggccggcga catcggcgta ggcggacgcg aaatcggcta
      601 cctgttcgga caatacaaaa aaatccgcaa tgaattcact tccgtcctga ccggcaaagg
      661 tttggaatgg ggtggcagcc tcatccgccc cgaggcgacc ggctacggct gcgtctattt
      721 cgcccaagcg atgctgcaaa cccgcaacga tagttttgaa ggcaaacgcg ttctgatttc
      781 cggttccggc aacgtggcgc aatacgccgc tgaaaaagcc atccaactgg gtgcgaaagt
      841 gctgaccgtt tccgactccg acggcttcgt cctcttcccc gacatcggta tgaccgaagc
      901 gcaactcgcc gccttgatcg aattgaaaga agtccgccgc gaacgcgttg ccacctacgc
      961 caaagagcaa ggtttgcaat actttgaaaa ccaaaaaccg tggggcgttg ccgccgaaat
     1021 cgccctgccc tgcgcgaccc agaacgaatt ggacgaagaa gccgccaaaa ccctgttggc
     1081 aaacggctgc tacgtcgttg ccgaaggcgc gaatatgccg tcgactttgg gcgcggtcga
     1141 gcaatttatc aaagccggca tcctctacgc tccgggcaaa gcctccaacg ccggcggcgt
     1201 ggcaacttcg ggcttggaaa tgagccaaaa cgccatccgc ctgtcttggg cgcgcgaaga
     1261 agtggacagc cgactgttcg gcatcatgca aagcatccac gagtcctgcc tgaaatacgg
     1321 caaagtcggc gacaaagtga actacgtcaa cggtgcgaac atcgccggct tcgtcaaagt
     1381 tgccgatgcg atgctggcgc aaggcttcta agcaaacgcc tccgccccgc aaacaaaatg
     1441 ccgtccgaac cgcaaatgct gttcagacgg catttcatta tccgcccgtt cgaatcgggt
     1501 aatactatag tgaattaaat ttaaatcagg acaaggcggc gagccgcaga cagtacaaat
     1561 agtacggcaa ggcgaggcaa cgccgtactg gtttaaattt agttcactat accgatacat
     1621 ccgaatatgc cagaccgtct gaacggtatt catacctccc aatcctgcac gcgcttcaaa
     1681 tcgttttgcg ccaaagtatc cgcgtggcgg ttacggctct gatattccct gtctttcaat
     1741 atgctgctcg ccacataatt caaatgagcc tttgccgcct ccgaagcctc gcccggccgg
     1801 cggttcgata tcgcctcata cagcacgcgg tgctgcgcca tcagtttcgg acgcggatct
     1861 tcttcctgat tcagataaat aaggctgctg cgcgtctgcc ggtacagcat tttcaacaaa
     1921 ccgcccgaca aatggctgaa caacaaattg tgcgccgcat ccgcaatcgt ctgatggaag
     1981 ctgacatcgg cttcgccctg atgttccaga ttgccgcttc cgcacgcttc ctcaaacttt
     2041 tcaagccaaa accgaatccg cttcaaatcg gcatccgtcc ggcgttctgc cgccaatgcc
     2101 gccatacagc cctcgatgtg gcagctgaaa tcaaaaacat cctgttccca attggaatgt
     2161 ttgcccaaaa gctcctgcca actttgcaaa aaatcctgct gcggcttgac cgaaacataa
     2221 taaccatcgc cctgcctcgc ttccaaaatc tgacgggcaa ccaaaatatt caatgccgac
     2281 cggaccgacg gacgcgaaac gccgaactct tccgccaaaa cgcgttcggg cggaatcttg
     2341 cccccttccg cgtaaacccc ttccacgata cggccttcca ataccgacaa tacctgatcg
     2401 ctgattttct gaggccttac cagtttcatc actcctcctt tataaagatt ccctgcagaa
     2461 cccttccgaa atacatcaaa catcaaattg gactggccaa tcagggcgga ttctaatgac
     2521 acgccgttcc cgccgtcaac ggcacttacc tcgcaccgcc cccgaaacac aggaaaaaac
     2581 tacaccaaac tacaattttt gttcatgcaa atatttgttt taacgggatt taaatgaaag
     2641 ctccgattca aatctgccga accgcccaaa aatatattga cctgaatatt aaagtttcgt
     2701 aaagtaatgc aacgttgctt taattggttt gaccactatt gccgacgatt agaaaaatat
     2761 tttcggagat gttcaattat ggaaacttgg gttcaaaact acacggcaat cggcggcagc
     2821 ctgtatctga ctgccgccgc cgcactctta cccatcgtct ttttctttgc cgcgctgacc
     2881 gtcctgaagc tgaaaggcta tcaggcgggg ctttatacgc tgctgattgc gcttgccgtt
     2941 gccgtattcg gcttcgggat gccgacgggt atggcggttt cttccctgtc gccgcagccg
     3001 gattgaccca acgccccata cgctacactg gacttgaccg cgcattacaa aatcggcaaa
     3061 tccacccgca tcggtttgga ctttgaaaac gtctttaaca aacgctgccg cacgatgccc
     3121 gacattcacg tttacggcac gccgcgcagc ctgaccgcaa ccgtcaaaca tatagtggat
     3181 taacaaaaat caggacaagg cggcgggccg cagacagtac aaatagtacg gaaccgattc
     3241 gcccggtgct tgggcgcctt agggaatcgt tctctttgag ctaaggcggg gcaacgccgt
     3301 actggttttt gttaatccac tataaagaaa gaaatgccgt ctgaaacctt atcgtttcag
     3361 acggcatttg tttgcccggg cggttatttg ccggtttggg tatcccgttt caatccgccg
     3421 ccgagcgcct tgtacaaatc ggcaaggttt tcggcgcggg tcagttgtgc cgacaaagcc
     3481 gcaccttccg ccgaatagct gatgcgttcc gcatcgagca aatcgagcgc gccggatacg
     3541 ccgtgtttgt aacgcagtcc gaccaagcgc aacgcttctt tagaggcgcg gctttgtttg
     3601 cttaaagcgt cataggcttt atccagctgc tcgcgcgccg ccaatgcgtt tgccacgtct
     3661 tgaaaggcgg attggacggc ggattcatag gcaacaattt gtgcctgttg gcgcagtttt
     3721 gccacatcaa ggttcgcctt gttcgttccc caagtaaaaa tcggcagggt aatagacggc
     3781 gcgaacgccc aaacgcccgt gccgcttttg aacagcccgc ccaattcgac agaacccgta
     3841 ccgacgcttc cggtcaggcg gatggacggg aaaaaggcgg cgcgcgccgc accgatattg
     3901 gcgtttgcct gtttgagcgc gtgttcggcg gcgcggatgt cgggacggtc gagcaatact
     3961 tcggaactca aaccggcagg cagtttttca acaaaaaact gcttgtccaa cggcaaaccg
     4021 gcgggcaggt cttcgggtat cggacggtta atcaaggttg ccaaggcatt gcgcgcctgt
     4081 tcgcggctgc gcgcggcatg ggcataatcg gctttggcag attcaatcaa ggcttcctgc
     4141 tggcgcaggg cgacggcgga aatcacgcct gccttgtacc gcaattcgga cagcttgtag
     4201 gtttcctcgc gcgttttcaa gacacgctgc gccaaagaca tcgcttcttc ggcataacgc
     4261 tcgttgaaat aggctttggc aacggtggca atcaggctca aatgtgccgc atcgcggttg
     4321 gcaacgctgg caaaatagcc ttgcagtgct gcttcgctgc tgctgcgcac gcgcccgaac
     4381 agatcgagtt cgtaagatgc cgcacccagt ccgacattgt agctgctgct gacattgccg
     4441 ccgctcaagc tgccttggcg cgagccgttc gcattggcgg caagcgtggg caggaggttg
     4501 ttgcgctcga tcatgtattg tttgcggtag atttcgctgt tcaatacggc tgtacgcaaa
     4561 ctggtattgc gctcgagtgc gatgtcgatc agcttttgca ggcgcgggtc ggcaaaatag
     4621 tcatgccaac ccaaatcaac cgcgcggacg gaagaaaccg atgtgtcgtt ttggaaggtt
     4681 tccgcaactt cgactttggg ctgctcgtat tgaggaatca tggtgcaggc agacaatgca
     4741 aaggctgctg caacagaggt caaggtagtt ttcaatgtag tattcataaa aaagtcctga
     4801 tgccgtctga aaaccggcgg ttctcagacg gtattttgct taatattgtt tatcgtccga
     4861 accggttata cccgcttttg atgcatgtct gaccgccatt tcatgctcgt gtgcagtttc
     4921 tttgaagaat ttgcgcacca ctacataaaa aagcggaaca aggaacacgg acaagagcgt
     4981 gccgatgagc atcccccaga atacggtcgt gccgatggcg cgctggctgg cagaactcgc
     5041 accagcggca atatacaggg gaaccacgcc caaaataaag gcgaacgagg tcatgataat
     5101 cggacggaaa cgcaggcggg ctgcctccaa agcggcttcg accgcgcttt tcccttgcgc
     5161 ttgaaggtct ttggcaaatt cgataatcag aatcgcgttt ttcgcactca aacccatcac
     5221 agtaacgaaa ccgacttgga agtagatgtc gttggcaaac gagggaacgc tgcccaacag
     5281 tccttcaaac aggttgcgcc cggttacgcc cgcagccgca ccgatcaaac ccaacggaat
     5341 cacaaggatg accgccagcg gaatcgacca gctttcataa agcgcggcaa gtaccaaaaa
     5401 tacggctgca accgccaaac cgtacaaaat cagggtttgc gagccgcctt ttgcctcttc
     5461 gcgcgactgt ccgccccatt cgaagctgta accgccgccc aattcgtcaa ccattttttg
     5521 aaccgccgcc atagcctgcc cggtggaaac gccggttgca ggcgaagcgg acagcttcat
     5581 cgagggataa ccgttgaagc gtacgctctg ttccgtaccg ttttcccaag aaacagtagc
     5641 aatggtggaa agcggtacgg cgacgccgga tttgttcggc acggtcaggt tcaaaatatc
     5701 ggcaggctgc atacgggcat cctcgtcggc ctgcaccatc acgcgttgca gacggccttg
     5761 gttcgggaag tcgctgacat aagacgaact cagcgcgctt gccaatgcgg tgcggatgtc
     5821 ggcaaacgaa atgccttgcg ccgccgctgc ggcacggttg atgtcgattt tcaactgcgg
     5881 cgagtcttcc aaaccgccgg cacggacggt gctggggtca aacaaaccgc tggcacgcat
     5941 tttctgaatc agctcgttgc gcttcgccag caatgcggta tggccggtat tgttgcggtc
     6001 ttgcaggttg atgctcaggc ccgaaccgtt gcccaactcc agaatcggag gcgggacgac
     6061 ggcgatgccg aaaccgtctt taagcgtccc catcatcata cccgtcagct tgccggcaac
     6121 cgcaacggca tcgctgccgg aggcggtacg ttcgttccaa tctttcaata tggcaaaacc
     6181 catcgccata ttctgaccgc tgcccgaaaa gctgaagccg gaaacggtaa tgatgttttc
     6241 aatttcggga atgcttttcg ccagttgggt aacttgtgct agcgtcgcat cggtgcgctc
     6301 tttggtcgca cccgcaggca gttgcacgct gaccataacg aagccttggt cttcggtcgg
     6361 caggaacgaa gtcggcaggc gcataaacag gaacacgccc acaaccgcca agccgatata
     6421 gacaaccatc atgcggaaag tcttacgcag cactttggca acccggcctt cgtagccgtg
     6481 cgtccaactg tcgaatttct tgttgaacca gccgaagaaa ccttttttct cttcgtgatg
     6541 ccctttcggg attgtcttca acattgtggc acacaaagca ggggtaaggg tcagcgcaag
     6601 gaaggcggag aatgcgattg atgacgccat cgtcagggca aactgtttgt aaatattgcc
     6661 ggccgccccg ctgaacatcg ccagaggcac gaacacggaa atcagaacgg cggtaatacc
     6721 gatgaccgcg cccgaaatct gacccatcgc ttttttggtc gcttctttgg gcggcaggcc
     6781 ttcacccgcc ataatgcgct cgacgttttc aaccaccaca atcgcgtcat cgaccacgat
     6841 gccgatgacc aatatcatcg caaacatcgt caatacgtta atcgacatcc ccatataaga
     6901 gatgaaggcg aaaccgccca acagggaaat cggtacgacg atggtcggaa tcagcgtata
     6961 acggatgttt tgcaggaaga ggtacattac gacaaacacc agcaccatcg cttcgattaa
     7021 agtgtgaatc actttttcaa tcgaaatttc aacgaatttg gaagtatcgt aaggggtttt
     7081 ccaactcata ccctgcggaa agtatttttc cagcaccgcc aagcgttctt ttaccgcctt
     7141 tgccgtcgcc atcgcattgc cgctgttgga caacattacc gccataccgg tggtatttac
     7201 cccgttcagg cgggttgagg aagaatagtc ttccataccc aatccgactt tcgccacatc
     7261 cttcaggtaa atattagaac cgtcggtatt ggcgcggagg atgacgttgc cgaattcttc
     7321 tgccgtaccc aactgccctt gcgccgttac ggtagccgta accgtctgtc cgcgcacagc
     7381 gggaagcgaa ccgatggaac ctgcggaaat ttggatattc tgcgccgaca acgcgctgcc
     7441 gacatcggca aacgacaaat tgtagttttg cagtttctta ggatcgaccc aaatccgcat
     7501 cgcgcgttgc gcgccgaaca ggcggacctg ccccacgcct tcgatacgct gcaattcggg
     7561 aacgacgttg cgctgcgcgt agtcgttcat ctcttcggtt gactgcacat ccgacgaaag
     7621 catcacaatc atcaggaaat tggaacgcgc cttggatacg gttacgccgt attgctggac
     7681 ggttgccggc agcgtgctca atacttcgga aagcttgttc tgcacttcca cctgcgccag
     7741 attctcgtcg gtatcgggcg taaaggtcag gctcacgctg ccgctgccgc tcgaatcggc
     7801 ggaagtggac atatagtcca aaccttccac gccgttcata ttccgttcga tcacggaaag
     7861 tacgctgcct tccatcactt gtgcggacgc acccggataa atggcgtgca aagtaatggt
     7921 cggggcggca acggacggat attgcgaaac cggcaggctt ttaatgccga aaatacctgc
     7981 cgcaataatg aaaatcgaaa taacccacgc gaaaatgggg cggtcgataa agaatttagc
     8041 catcgatgcc ttccttattt cgcttcagaa gcaggtttgg cttcagatgc cgtctgaacg
     8101 ccggcttgag gggcggcagc ttgattttca gacggcgccc attctttagg cgttaccttt
     8161 ttcgcccccg tcataccggc gatactgatg ccttccacaa ccaccttgtc cccgtccttc
     8221 agacccgacg taacaatcca attcgtaccc tgctgttgcg cgaccgttac ctcgcggggt
     8281 tccataccgc cctgggcatt cacaatcatc acggtatctt tcgcaccgcg cgttaccgcc
     8341 tgctgtggaa cgatgaatgc attatccgcc gccacctgat ccatcagcac acgcacatac
     8401 aggccgggca tcaggatatt ctgatcgttc gatacggcgg cgcgcaaggt aatctgaccg
     8461 gtcgattcgt caacggtcgg atcagcaaac agcaggcggc ctttttcagg ataaaccgta
     8521 ccgtcgtcaa atttgatgcc gaccgcaatc gcaccatccg ccgccagcag cttgccttcg
     8581 gctatctgcc ggcgcagttt catcacttcg gatgcagact gggtaacgtt cacatacatc
     8641 ggattggttt ggcggatggt ggctaaaaca gttgtatcgc ccgcattcaa cagcgtacct
     8701 tcggaaactt tggactgacc gataaagccc gaaatcggcg cggtaatgcg cgaacggttc
     8761 agattgatgc cggcggattt gatcgccgcc tgcgccgctt taacgcccgc ctcggcagaa
     8821 cgtttcgccg ttaccgcagc atcgtactct tgtttactga tggcatcggc ggaaaccagc
     8881 ggtttgtaac gcgccaaatc cgcatccgct ttggcaagcg ttgcctgtgc cgttgccagt
     8941 tgcgcgcgcg cgctttccag acctgcttca taagtggaac tgtcgatctg atacagcggc
     9001 tgcccggcgc ggacataact gccttcttgg aacaggcgtt tttggatgat gccgccgact
     9061 tgggcgcgga catcggcggt acgcagcgat tccaaacgcc ccggcaactc gacggtcaat
     9121 gcgacggttt gcggatggac ggttacgacg ccgacgacgg gcgcgggggc ttcccgaccc
     9181 gcaggctgcc cgccctgcgc cgcgtctccg cctttaccgc aagacgacag tgccaatgca
     9241 acggcggcag ccaacgcggc cgcacgcatc gccttagaag cataaaaagc cattatttat
     9301 cctatctgtc tggtttgatg taaagggttt tgccaatcaa caggcattct tatttcagga
     9361 tataaaaacc gcctgctttg atacccgaat gttcgaacgg gttgcaaagc aggttatacc
     9421 tgttttcaaa gttgagatgc agtctcaatt ttatgggttt cattatacat acacgattgc
     9481 acggataaaa agtctttttt ataatccgcc ctcgtcaaac cgacccgaaa cgaaaacgcc
     9541 attatgagaa aaaccaaaac cgaagccttg aaaaccaaag aacacctgat gcttgccgcc
     9601 ttggaaacct tttaccgcaa agggattgcc cgcacctcgc tcaacgaaat cgcccaaacc
     9661 gccggcgtaa cgcgcggcgc gctctattgg catttcaaaa ataaggaaga cttgtttgac
     9721 gcgttgttcc aacgtatctg cgacgacatc gaaaactgca tcgcgcaaga tgccgcagat
     9781 gccgaaggag gttcttggac ggtattccgc cacacgctgc tgcacttttt cgagcggctg
     9841 caaagcaacg acatccacta caaattccac aacatcctgt ttttaaaatg cgaacatacg
     9901 gaacaaaacg ccgccgttat cgccattgcc cgcaagcatc aggcaatctg gcgcgagaaa
     9961 attaccgccg ttttgaccga agcggtggaa aatcaggatt tggctgacga tttggacaag
    10021 gaaacggcgg tcatcttcat caaatcgacg ttggacgggc tgatttggcg ttggttctct
    10081 tccggcgaaa gtttcgattt gggcaaaacc gccccgcgca tcatcgggat aatgatggac
    10141 aacttggaaa accatccctg cctgcgccgg aaataatcaa gccttggtaa caatgccgtc
    10201 tgaaacaaac aaaccctttc aaacggcatc aaaatgacac aaagcattct tctaaaaata
    10261 catattcact aaattgcatt tttaatttcc cctatcatcg catgaacatt gtcttggtca
    10321 aaatgtccgt tttcttctga ataaacttct aacaaataat gttcaatgaa cgttttatct
    10381 gtcatc
//
LOCUS       DAXGCP010000078        10085 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.078, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000078 DAXGCP010000000
VERSION     DAXGCP010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10085)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10085)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10085
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.078"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(21..932)
                     /gene="crgA"
                     /locus_tag="ACFJCW_001698"
     CDS             complement(21..932)
                     /gene="crgA"
                     /locus_tag="ACFJCW_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HFC4151785.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLEMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLNLTEEGAQYFRRAQRILQEMAAAETEMLAVHEVPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSHFRVVASPEYLAKHGTPQSAEDLANHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSSCGIACLSDFLVDNDITEGKLIPLFAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVKELGKNMNRTNTK"
     gene            1171..1749
                     /locus_tag="ACFJCW_001699"
     CDS             1171..1749
                     /locus_tag="ACFJCW_001699"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008753 - NADPH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HFC4151786.1"
                     /translation="MNILLLDGGKAFGHSHGGLNHTLHKKAKEVLTALGHNVQETVID
                     AGYDVEAEIEKFVWMDAVIWQMPGWWMHEPWTVKKYMDEVFTGGHGKLYQSDGRHRVN
                     PTEGYGTGGLLQGKKHMLSLTWNAPIEAFTREGDFFEGKGVDVLYMHFHKANEFIGLS
                     RLPTFLCNDVVKNPQVEKYLADYQAHLEKVFG"
     gene            complement(1957..3342)
                     /gene="pntB"
                     /locus_tag="ACFJCW_001700"
     CDS             complement(1957..3342)
                     /gene="pntB"
                     /locus_tag="ACFJCW_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HFC4151787.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKRGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIHKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIEPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLAAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     ISSSGSQEIEEYREVKAADVAEMLKGASSVIITPGYGMAVAQAQYPVAEITELLRKNG
                     IEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVLKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDGILAELKK"
     gene            complement(3422..3805)
                     /locus_tag="ACFJCW_001701"
     CDS             complement(3422..3805)
                     /locus_tag="ACFJCW_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HFC4151788.1"
                     /translation="MTFAYWCILIACLLPLFCAAYAKKAGGFRFKDNHNPRGFLAHTQ
                     GAAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFACTVGLFVAAA"
     gene            complement(3809..5347)
                     /locus_tag="ACFJCW_001702"
     CDS             complement(3809..5347)
                     /locus_tag="ACFJCW_001702"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HFC4151789.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEGELPLLKEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFLQ
                     ESGGGGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVNL
                     TKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSARPQQTPSEKAAPAAK
                     PEPKPVPLWKKLAPAAIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYHVVWNVSHSL
                     HTPLMSVTNAISGIIVVGALLQIGQGNGFVSLLSFVAILIAGINIFGGFAVTRRMLNM
                     FKKG"
     gene            5636..6469
                     /gene="serB"
                     /locus_tag="ACFJCW_001703"
     CDS             5636..6469
                     /gene="serB"
                     /locus_tag="ACFJCW_001703"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HFC4151790.1"
                     /translation="MPQALVLQFPSAEALPSDFPSRLPEPDYADEKRMRFIVEEGFSL
                     SEKDAALLDSRQIDHAVLPNMAFGELGLIVSDMDSTLITIECIDEIAAGVGLKGKVAE
                     ITERAMRGELDFGQSLRSRVALLAGLDEQILADIYENVLKLSPGAEFLLDECKRHNVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANILEIENGRLTGRLKGRIIDAQAKADLLREYR
                     SRLGLQPHQVLAMGDGANDIPILKEAGIGVAYRAKPKARAAADACINFGGLERVRGLF
                     G"
     gene            6533..7755
                     /locus_tag="ACFJCW_001704"
                     /pseudo
     CDS             6533..7755
                     /locus_tag="ACFJCW_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
     gene            7916..9496
                     /gene="purH"
                     /locus_tag="ACFJCW_001705"
     CDS             7916..9496
                     /gene="purH"
                     /locus_tag="ACFJCW_001705"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HFC4151791.1"
                     /translation="MSVIKRALISLCDKAGAVEFAQTLHKLGVEILSTGGTAKLLAGA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPAMVRSAAKNWKHVAIVTDTADFPAIAAELE
                     ANNGALSDKTRFNLSRKAFSHTAEYDGMISNYLTSLSDGVLSGEPEIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIHPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYATDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLKAGANRFELKRVGGGLLVQTPDIRR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDAGLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMAVTGIRHFRH"
BASE COUNT         2300 a         2695 c         2747 g         2343 t
ORIGIN      
        1 agaataagtt aattaatgtc ttatttggta ttcgttctat tcatattttt tcccagttcc
       61 ttcactaaaa aatccaaaaa tacgcgtaag cggaggttga cggctttatc gctgtaataa
      121 acagcattaa aggggtgtgt tttattggag gtttgttcgg cgaatagggg aattaacttt
      181 ccttcagtga tgtcgttgtc aaccaaaaaa tctgataagc aagcaatacc gcaacttgaa
      241 aggcacaacg agcgtaagat ttcaccgctg ctggcggtaa agtgcggtga aattttatag
      301 ggatttccct gcgcatctaa aaccgcccat gtatttagag aaccgggttc tgtgaagcct
      361 aaacattgat ggttggcaag atcttctgca gattgtggcg taccgtgttt tgctaaatat
      421 tcaggactgg cgactacgcg gaagtggctg tcaaacagat ggcgtgcacg cagcccggaa
      481 tcgtccaatt ctccggcccg taaggcaata tcgactttgc gttcaatcag attgatatag
      541 ccttcggaag aaacgagcga aagtcggata tgcggatagc gttcgttgaa ttttgctgcc
      601 agcggcgcca gcagatgcag caccatcggc atcgcggaat ccacgcgcaa cacgccttgc
      661 ggtacttcgt gcactgccag catttcggtt tccgccgctg ccatttcttg caggattctc
      721 tgcgcgcggc ggaaatattg cgcgccttct tccgtcagat tgagttgccg cgtggtgcgg
      781 ttgagcaggt tcacgcccaa cttttcctcc agccgtttga cgatgcggct tacggcagaa
      841 tttgccatct ccaactgctc cgccgcacgg ctgaagctgc cgctttccac cacttgaaca
      901 aatacggtca gttcttctga attggttttc atcgtgtttc cttttcggtt ggaaccccac
      961 cctttagggc ggcaggatca gactttattt gggaagggcg taaccccttc ccaatcagga
     1021 cggcacatag ggagacgatt tatgtgtcat cccgtgtgtt gaaacatctg attattccat
     1081 ttgacgcaaa agtgttttct tatttttgca cttttaaatc ataaagtaaa acggtacaat
     1141 acattcatca attcacaaac gaggtaacaa atgaatattt tattattaga cggcggcaaa
     1201 gcgttcggac attctcacgg cgggttaaac cacacgcttc acaaaaaagc gaaagaagtt
     1261 ttgaccgcgc tcggacacaa tgttcaagaa accgtgattg atgccggcta tgatgttgag
     1321 gcggaaatcg aaaaattcgt ttggatggat gctgtgattt ggcagatgcc gggctggtgg
     1381 atgcacgagc cttggacagt gaaaaaatat atggacgaag tctttaccgg cggacacggc
     1441 aaactctacc aaagcgacgg cagacaccgc gtcaatccga ctgagggcta cggcacaggc
     1501 ggcttgttgc aaggcaaaaa acatatgctt tcactgactt ggaatgcgcc gattgaagcc
     1561 tttacccgcg aaggcgattt ctttgaaggc aaaggcgttg atgttttgta tatgcacttc
     1621 cacaaagcca acgagttcat cggcttgagc cgcctgccga cattcttatg taacgatgtg
     1681 gttaaaaatc cgcaagtgga aaaatacttg gcagattatc aggcacactt ggaaaaagtg
     1741 ttcggctaat taaaaatcca tcttcaacac ggagatggat tttgtttgtt tcgttgattt
     1801 tgtgtcagtt tcagatgtgg gtgcttatcc ggacgggtcg tctgaaaatg tttgccccaa
     1861 tgcaaaaaaa tcactgcaaa ccttcacaaa cggggctggt agtgattttt tcaaatcaaa
     1921 cagattgaaa acctgcgccg aattgttcag acggcattat tttttcaatt ccgccaaaat
     1981 cccgtcaacg gttttcttcg cgtcgccgaa acacatcacg ctgttttcgt tgaagaacag
     2041 cgggttttgt acgcctgcgt agccggtgtt catcgagcgt ttcaatacga cgacttcttt
     2101 tgccttccat acttctaaaa ccggcatacc tgcaatcggg ctgttcggat cggtttgggc
     2161 ggcagggttg acggtatcgt tcgcaccaat caccaagacc acatcggttt cggggaagtc
     2221 gtcgttgatt tcgtccattt ccaaaacaat gtcgtagggg actttggctt cggcgagcag
     2281 tacattcata tgaccgggca ggcggccggc gacggggtgg atgccgaagc gtacttcgat
     2341 gccgttttta cgcaaaagct cggtgatttc ggcaacgggg tattgtgcct gcgccactgc
     2401 catgccgtag cccggggtga taatgacgct gcttgcgcct ttcagcattt cggcaacatc
     2461 ggcagctttg acttctcggt attcctctat ctcttggctg ccggaagacg atatgccgct
     2521 gtcgctgccg aaaccgccgg caatcacgga aacaaacgac cgattcatgg ctttgcacat
     2581 aatgtaggac agaattgcgc cgcttgagcc gaccagcgcg ccggtaacga tgagcaggtc
     2641 gttggagagc ataaagcctg ccgctgcggc cgcccagccg gagtaggagt tgagcataga
     2701 tacgaccacg ggcatatccg cgccgccgat ggaggcaacc aagtgccagc cgaatgcgag
     2761 ggcgatcagg gtcataatca gaaggatgaa gccgctgccg tcaatgccga caaatacgag
     2821 cagcaacaca aacgatacgg cgagcgccag tgcgttgagc ttgtgtttgg cgggcagttg
     2881 cagcgggctg ctgctgattt tgccgttgag tttgccgaat gcggccagtg agccggtaaa
     2941 ggttaccgcg ccgatgaaaa tgcccaaata gacttcgacc agatggatgg tgtgcatatc
     3001 gtgcgaaacg ttgcccggct cgatgtagct gttgaagccg accaaaacgg ctgccaagcc
     3061 gacgaagctg tgcagaagtg caatcagttc gggcatttcg gtcatttcta cttttttggc
     3121 tttgtggatg ccgattgccg cgccgatgag catggcgatg ataatccagc ccagtccgtg
     3181 ggtattgtcg gaaaagaccg ttacgaagag ggcgaccgcc ataccggcga taccggaata
     3241 gcagccccgt ttggcggttt cctgtttgga cagccccgcc agtgagaaga tgaataaaat
     3301 tgcggcaacg atatacgccg ctgttacgag tcctgaagac atggaaattc tccgattttc
     3361 gatgatttgt tttcaatacc gtctgaaaaa ttgacgttcg tgttttcaga cggcatctgt
     3421 ttcaagcagc cgcgacaaac agtccgacgg tgcaggcaaa tccgcccgcc cacatcagcg
     3481 agcgcaatgc tgctttgtct gcgatgtagc accagataaa ggcgaggcgg aacaggatga
     3541 acaatccggc aagcgtgttg acggttgctt gtccggcatt gccggttgcg tgtgccgtca
     3601 aaacggcggc ggcaaacggt gcaaaggctt caaaaccgtt ttgctgcgcg gcgtgggcac
     3661 gggcggctgc gccttgcgta tgtgccagaa aaccgcgagg attgtggttg tctttaaacc
     3721 ggaatccgcc cgcttttttg gcatacgccg cacaaaaaag cggcaatagg caggcaatca
     3781 gaatgcacca ataggcgaaa gtcatggctt accctttctt aaacatattc agcatacgcc
     3841 gtgtaaccgc aaagccgccg aagatattga tgccggcaat caggatggca acaaacgaca
     3901 gcagcgaaac gaagccgttg ccctgaccga tttgcagcag cgcgccgacg acgatgatgc
     3961 cggagatggc gttggttacc gacatcagcg gtgtgtgcag cgagtggctg acgttccaaa
     4021 cgacatggta gccgatgacg caggcgagga cgaagacgat aaagtggttc aagaatgctg
     4081 cgggtgcgac cgcgccgacc cacagcacca atacggcggc gatggcggcg ggcgcgagtt
     4141 ttttccacag gggaacaggt ttcggctcgg gcttggcggc aggcgcggct ttttcagacg
     4201 gcgtttgctg cggccgggcg gaaacctgaa tcggcggagg cgggaaggtg atttcaccgt
     4261 cgcgggtaac ggtcatattg cggataatca cgtcttcgaa gtccagcgtg atttcgccgt
     4321 ctttgttcgg gcttaacagc ttggtcaggt tcaccaagtt ggtggcgtaa agctgggaag
     4381 actgtccggc aaggcggttt gccatgtcgg tgtagccgat gattttcacg ccgttgccgg
     4441 ttacggacaa ttcgcccggt cgggtgagtt cgcagttgcc gcccgtcgcc gccaaatcga
     4501 cgatgacgga tccggatttc atgctttcca ccatttcttt ggtaatcagc ttgggagcgg
     4561 gtttgcccgg aatggcggcg gtggtgatga tgatgtccac ttctttcgcc tgttcggcaa
     4621 agagcttcat ttcggcggcg ataaattcgt cgctcatcac tttggcgtag ccgtctccgc
     4681 cgccgcccga ttcttgcagg aagtcgagtt tcaggaactt accgcccatc gattcgattt
     4741 gttccgccac ttccaagcgg gtatcgaacg cgcgcaccac tgcgccgagc gaatttgccg
     4801 taccgattgc cgccaaaccc gccacacctg caccaatcac caaaacctgc gcaggcggca
     4861 ctttgccggc ggcagtgatt tgaccggtga agaaacggcc gaaggcgttg gcggcttcaa
     4921 tcacggcgcg gtagccgctg atgtttgcca ttgaagacaa agcgtccaag gcctgagcgc
     4981 gggaaatgcg gggaaccatg tccatcgcca gcgcgttgac tttcttggcg cgcaaggcct
     5041 cgaccaaagc ctcgttttgg cgcggccaca ggaagctgac gatggtttga ccttctttga
     5101 gcagcggcag ctcgccttcg gacggcgcgt tgaccttata aattaaaggg caggcccaaa
     5161 ccgccgcttt gtcggcaacg gttgcgcctg ctgtttggta agcggcatcg tccaaacttg
     5221 ccgccaaacc tgcaccgctt tcgacaacgg tttcaaagcc tagtttgccc agcagggcaa
     5281 cggtggcggg cgtgcaggcg acgcgggttt cgccggataa tgactcgcgt gggataccga
     5341 ttttcatctc tgaatccttt ttcgggttgt tcatatgtat cgtgggttaa atttaaatcg
     5401 gtgcagggcg gagcaacgcc gtaccggttt aaaaccgatt cacttcaaat gttaatatat
     5461 tttagataat ccccttataa cgaattttca tcaggctggc aatagttgcg cattttcccg
     5521 tgttgtccga cacatactgc cgtttgcgtt tgaagtcgtt ttccgattgc aggcacgccc
     5581 gccgtaacat tctttgtcgt ttcactatat aatccgcatt ttttgagccg ccgttatgcc
     5641 gcaagccctc gtcctccaat ttccctccgc cgaagccctg ccttccgact tcccctcacg
     5701 cctgcccgaa cctgattatg ctgatgaaaa gcgtatgcgt tttattgttg aagaaggatt
     5761 ttctttaagc gaaaaagacg cggcgttact ggacagccgt caaatcgacc acgccgtttt
     5821 gcccaatatg gcgtttggcg aactcgggct gattgtcagc gatatggatt cgacgctgat
     5881 taccatcgaa tgtatcgatg aaattgcggc aggtgtgggt ttgaaaggca aagtagcgga
     5941 aattaccgag cgcgccatgc gcggagagtt ggatttcgga cagtctttac gcagccgcgt
     6001 tgcgttgttg gcgggattgg acgaacagat tttggcggac atttatgaaa acgttttgaa
     6061 gctctcgccc ggtgcggaat ttttgttgga cgaatgcaaa aggcacaatg tgaaattcct
     6121 gctggtgtcc ggcgggttca cgttttttac cgaaaggctg caacaacggc tcggcttcga
     6181 ataccaacac gccaatattt tggaaattga aaacggcagg ttgaccggcc gtctgaaagg
     6241 cagaatcatc gacgcgcagg caaaggcgga tttattgcgc gaataccgca gccgcctcgg
     6301 attgcagccg catcaggtgt tggcgatggg cgacggtgcg aacgatattc cgatactcaa
     6361 agaagcgggc ataggcgtgg cttaccgcgc caaaccgaaa gcgcgggccg ccgccgatgc
     6421 ctgtatcaac ttcggcggtt tggagcgtgt acgcggcctg ttcggatagg cggataggaa
     6481 acggatgccg tctgaaaggt tttcagacgg catttgaacg gcaggaacga cagtgggacg
     6541 cagaaaactt tggtttgccc tggcggcagc aggcgttatc ggcggtttgg tcggcattgt
     6601 gctgacggaa ctgatgcact tcatacggca tacggcatac ggttatgacg cggacggtgc
     6661 gtacatctcg ttccgcgaag gtgtggcaca ggctttcggt atgcggcgcg ttgccatgct
     6721 gacgctgtgc ggcgcgatcg caggcggcgg ctggtggctg ctcaaacgtt tcggcaagcc
     6781 gcaaatcgaa atcaaagccg ccttgaagca gccgttgcag gggctgccgt ttctgacgac
     6841 ggttttccat gttctgctgc aaatcataac ggtcggactc ggttcgccgc tcggacgcga
     6901 agtcgccccg cgtgaaatga ctgccgcgtt tgcttttgcc ggcggcaggc ggttgggttt
     6961 ggacgaaggc gaaatgcgcc tcttgattgc ctgtgcgtcc ggagcgggtt tggcggcggt
     7021 gtataacgtg ccgctcgcct ccacgctgtt tatcctcgaa gcgatgttgg gcgtgtggac
     7081 gcagcaggcg gttgccgccg cattgctgac ttccgtcatc gccaccgccg tcgcgcgcat
     7141 cggcttaggc gacgtgcagc agtatcatcc cgccaacctt gccgtaaata cttcattgct
     7201 ttggttttcc gccgtcatcg gcccgatact tggcgcaacc gccgtctttt tccggcgcac
     7261 cgcccaaaaa ttccccttca tcaagcgcga caatatcaaa atcattccct tggccgtctg
     7321 tatgtttgta ctcatcggtg tgattgccgt ttggtttccc gaaattttgg gcaacggcaa
     7381 agcaggcaac caactgactt ttggcggttt gaccggctgg caatacagcc ttgagttgac
     7441 cgctgtcaaa tgggcggtcg ttttgatggc gctggcggca ggcgcatacg gcggactgat
     7501 tacgccgtct atgatgctcg gcagcaccat ttctttgcag ccgccgccgc gtggaacagc
     7561 gtcttccccg aaatgccgtc tgaaagcgcg gcagtcgtcg gagcggcggt gtttctcggc
     7621 gtatcgctca aaatgccgct gaccgccatt gtgttcgtat tggaactgac ctacgcgccg
     7681 ctgtccctgc tgctgccttt gtgcatcggc atggcggggg cattgggaac atcgggaaaa
     7741 atgggcttca aatgaatgcc gacaaatgcc gtctgaaagg tttccagacg gcatttcttt
     7801 gcaaattgtc aacaatatct gcaaaaacct actgccaaaa aactgaaaat agcggataat
     7861 accgccccga aaaagatccc ctttcaccat ccaaccgtca gaaaaggaag ccccaatgtc
     7921 cgtcatcaaa cgcgccctga tcagcctgtg cgacaaggca ggcgcggtcg aatttgccca
     7981 aaccctgcac aagctcggtg tcgaaatcct ctccaccggc ggcacggcga agctgcttgc
     8041 cggtgcgggc gttcccgtga ttgaagtcgc cgactatacc ggtttccccg aaatgctcga
     8101 cggccgcgtg aaaaccctgc atcctaaaat tcatggcggc atcctcggtc ggcgcgattt
     8161 ggacgaacac gtcgccaaga tggaagagca cggcatcggc aacatcgacc ttgtgtgtgt
     8221 caacctctac cccttcgccg ccaccatcgc caagcccggc tgcacactgg aagacgcaat
     8281 tgaaaacatc gacatcggcg gcccggccat ggtgcgttcc gccgcgaaaa actggaaaca
     8341 cgtcgccatc gttaccgata ccgccgactt ccccgccatt gccgccgaac tcgaagccaa
     8401 caacggcgcg ttgagcgata aaacccgctt caacctctca cgcaaagcgt tcagccacac
     8461 cgccgaatac gacggcatga tttccaacta tttaacctcg ctttcagacg gtgttttgag
     8521 cggagagcct gaaatcggcg aatttccgag ccggttcaac caaagctgga ttaaagtgca
     8581 agatatgcgc tacggcgaaa accctcacca acgcgccgcg ttctaccgcg atattcatcc
     8641 tgcggcaggc agccttgccg cttataaaca actgcaaggc aaagaattgt cttacaacaa
     8701 catcgccgat gccgatgccg cttgggaagc cgtcaaatcc ttcgacgcgc ccgcctgcgt
     8761 gattgtgaag cacgccaatc cgtgcggcgt agccgttgca gccgatacct tgaccgccta
     8821 caaactcgcc tacgccaccg acaccaccag cgcgttcggc ggcatcatcg ccttcaaccg
     8881 cgaagtagac ggcgaaaccg tcaaacagat taccgacaac cagtttatgg aagtcttgat
     8941 ggcgccgaaa ttcaccgccg aagcccttga aatcgccgcc gccaagaaaa acgtgcgcgt
     9001 attggaagtg ccgctcaaag caggtgccaa ccgctttgaa ctcaaacgcg tcggcggcgg
     9061 actgttggta caaactcccg acatccgccg catcagccgc gccgatttga aagtcgtctc
     9121 caaacgccaa ccgaccgagc aggaatggaa cgatttgctg tttgtctgga acgtcgcaaa
     9181 atacgtcaaa tccaacgcca tcgtcttcgg caaaggcggc caaacctacg gtatcggcgc
     9241 aggccaaatg agccgcgtgg acagcacccg catcgccgcc cgcaaagcgc aagatgccgg
     9301 tctcgacctc aacggcgcat gtgccgcttc cgatgccttc ttcccgttcc gcgacggcgt
     9361 ggacgtgatt gccgaacagg gcatcaaagc catcatccat ccggcaggct cgatgcgcga
     9421 tcaggaagtt ttcgacgcgg cggacgaaca cggcatcgcc atggcggtaa ccggcatccg
     9481 ccacttccgc cattaaggca gacgaacaag gcaatgccgt ctgaagggtt ttcagacggc
     9541 atttttgcgc tatttaccgt aatcctgaaa tcccgtcatt cccacgcagg caggaatcta
     9601 gatgagaatc catcctgtca gaaatacccg aatcgtcagg aatacccgtg tcatcattcc
     9661 cgatacaccg taatcctgaa acccgtcatt cccgcgcaga cagaaatccg gatttgtccg
     9721 cgcggaaact tatgcgccgc cattcccgcg aaggcgggaa tccggaccgt tcggtttcgg
     9781 ttatttccga taaattcctg ctgcttttca ttcctagatt cccactttcg cgggaatgac
     9841 gaaggagtgg gaatccggtt tttgagttcc ggccatttcc gacaaattgc tttggcattg
     9901 gatatttcct attttaatcc actatagtgg attaacttta aaccagtacg gcgttgcctc
     9961 gccttagctc aaagagaacg attccctaag gtgctgaagc accaagtgaa tcggttccgt
    10021 actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccgccatatc
    10081 cgatc
//
LOCUS       DAXGCP010000079         9866 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.079, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000079 DAXGCP010000000
VERSION     DAXGCP010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9866)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9866)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9866
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.079"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..189
                     /locus_tag="ACFJCW_001706"
     CDS             <1..189
                     /locus_tag="ACFJCW_001706"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC4151792.1"
                     /translation="QIATPDTDNYKIPIPSLETQQKIVKILDKFTELEAELALRKRQY
                     RYYRDLLLDFDNQIGGDS"
     gene            215..784
                     /locus_tag="ACFJCW_001707"
     CDS             215..784
                     /locus_tag="ACFJCW_001707"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HFC4151793.1"
                     /translation="MVWKTLGEVAEYSKNRICSDKLNEHNYVGVDNLLQNREGKKLSG
                     YVPSEGKMTEYIVNDILIGNIRPYLKKIWQADCTGGTNGDVLVIRVTDEKVNPKYLYQ
                     VLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIPIPPLPEQEKIVAILGKFDTLTHSV
                     SEGLPHEIALRRKQYEYYREQLLAFPKAA"
     gene            1016..4114
                     /locus_tag="ACFJCW_001708"
     CDS             1016..4114
                     /locus_tag="ACFJCW_001708"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HFC4151794.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENRLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPAENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSGNSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLSVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTGFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSPDSVNGSESTAGLKRNLEKDGNKIIVTTIQKLNNLMKS
                     EDNLPVYHRQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFPENALGAETT
                     AGVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKELSAAENRQALL
                     HPERIREITQYILSRFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYEAFKTQQAGSLH
                     PLKTATIFSFAANEEQNAVGEIVDETFEPEAMDSSAKEFLQAAINDYNACFKTNFGTD
                     SKAFQNYYRDLAKRVKNREVDLLIVVGMFLTGFDAPTLNTLFVDKNLRYHGLMQAFSR
                     TNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEEYMNGYTDSQTG
                     EARRGYLDVAKELHERFPDPDKIETEKGKKDFAKLFGEYLRAENVLQNYDEFAALREL
                     QNVDAADEDAMKAFQEKYYLSDEDVQEMRKVPMPSERAVQDYRSAYNDIRDWLRRQKA
                     GEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLVFEHHKKIKGKAELVEEIRRIIRA
                     SIGHRAKEGLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRHEAAGLIAAEGLNETA
                     AKRYLTGSLKRGYASENGTELTETLPKMSPLNPQYLTKKQSVFQKIAAFVEKFAGIGA
                     DI"
     gene            complement(4154..6445)
                     /gene="clpA"
                     /locus_tag="ACFJCW_001709"
     CDS             complement(4154..6445)
                     /gene="clpA"
                     /locus_tag="ACFJCW_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HFC4151795.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDAAVPNV
                     LKLCGADLKAVSEQLAASVAENTPLIPDHLLDTVETRPTLGFQRVIQRAMVHTQSAGK
                     GLAEPLDVLVALMSETDSHAVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYFSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALADGLAHQIVNGDIPDALKEAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTGGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVAETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINGRFLPDKAIDVMDEAGAAQRILPKSKRKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSMGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHRLLDKK
                     VEAEFTPALRKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLADGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(6447..6749)
                     /gene="clpS"
                     /locus_tag="ACFJCW_001710"
     CDS             complement(6447..6749)
                     /gene="clpS"
                     /locus_tag="ACFJCW_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HFC4151796.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLSVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            6994..7197
                     /locus_tag="ACFJCW_001711"
     CDS             6994..7197
                     /locus_tag="ACFJCW_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HFC4151797.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            complement(7496..8827)
                     /gene="pmbA"
                     /locus_tag="ACFJCW_001712"
     CDS             complement(7496..8827)
                     /gene="pmbA"
                     /locus_tag="ACFJCW_001712"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HFC4151798.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRAGTADFSEQALRDTVRAAADIARHTAEDGCA
                     GLADPELMAQHIGDPDLYHEWDLDTEAAVGLAKQCEQAALDTDSRIENSEGAAVQTGH
                     YQYVYGNTHGFAAHRQSTHHSISCSVVAADENGMQRDYWYDSACRHPDMDSPETIGQT
                     AARRTLRRLGSRSIPTGSYPVLFDTTVSGGLIGHLVGTLSGGALYRQSSFLIDSIGKK
                     VLPDFLNLREEPHIPRSFRSSYFDAEGVATAPRFVIQNGIVEGYFLGSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            8981..9487
                     /gene="yjgA"
                     /locus_tag="ACFJCW_001713"
     CDS             8981..9487
                     /gene="yjgA"
                     /locus_tag="ACFJCW_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HFC4151799.1"
                     /translation="MFEQEDEWISKTQMKKQMNGLQDLGMELTRLSNDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAAHNAFLQRVE
                     QARVRLLADEGALTQFMSDFPNADAGRLRTLVRNTKKEQEQDKPPKNFRALFQELKTV
                     MENGGAEI"
     gene            9534..>9866
                     /locus_tag="ACFJCW_001714"
     CDS             9534..>9866
                     /locus_tag="ACFJCW_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151800.1"
                     /translation="MLFRKTTAAVLAATLILNGCTMMLRGMNNPVSQTMTRKHVDKDQ
                     IRAFGVVAEDNAQLEKGSLVMMGGKYWFAVNPEDSAKLTGLLKAGLDKPFQIVEDTPS
                     YARHQALPV"
BASE COUNT         2426 a         2457 c         2758 g         2225 t
ORIGIN      
        1 caaatagcaa caccagatac agataactat aaaatcccca tcccatcatt ggaaacccaa
       61 caaaaaattg taaaaatact tgacaaattc accgagctgg aagcggaatt agccctgcgc
      121 aaacgccaat accggtatta ccgcgactta cttttagatt ttgacaatca aatcgggggg
      181 gatagctgat ggctatcaat gccgtctgaa aaatgtggtt tggaagacgt tgggggaggt
      241 tgccgaatat tcaaaaaacc gtatttgttc ggataaactg aacgaacata attacgttgg
      301 cgtggataat ctcttacaaa acagagaagg taaaaagtta tccggttatg ttccaagcga
      361 aggaaaaatg acagaatata ttgtcaatga cattttgatt ggaaatatcc gtccgtattt
      421 gaaaaaaatc tggcaggcag actgcacggg cggaacaaac ggtgatgttt tggttatccg
      481 ggtaacagat gaaaaggtta atccaaaata tctgtatcag gtattggccg atgataaatt
      541 ttttgctttt aatatgaagc acgccaaagg tgcaaaaatg ccgcgtggca gcaaagcagc
      601 gattatgcaa tataaaatcc ccatcccccc gctccccgaa caggaaaaaa tcgtcgccat
      661 cctaggcaaa ttcgataccc tgacccactc cgtcagcgaa ggcctgccgc acgaaatcgc
      721 cctgcgccgc aaacaatacg aatattaccg cgaacagctg cttgccttcc ccaaggctgc
      781 ctgaaaaagc agcctgcact ttttcaggca gcccaatccg aacatcaaac cgtttatagt
      841 gaattaacaa aaatcaggac aaggcggcga gccgcagaca gtacaaatag tacggaaccg
      901 attcgcctgg tgcttcagca ccttagggaa tcgttctctt tgagctaagg cgagccaacg
      961 cagtaccggt ttaaatttaa ttcactataa aacccgacac cgcaaaggac gacccatgaa
     1021 cctcgaaacc aaacccatcg ccgaaacgcc gaatttcatc gtgctcgacc aatatgaaaa
     1081 aatcgaacag tcgggcagct accaatcgga aaaccggtta gaagcggagt taatcgccga
     1141 tttgcagaat caggggtacg aataccgcaa ggatttgaac agccaaagca ggctgctgga
     1201 aaacctgcgc gcccagttgc agcggctgaa cgatgtggcg ttttcagacg gcgaatgggc
     1261 gcggtttttg acggaatatc tggacaggcc ggctgaaaac attaccgata aaacccgcaa
     1321 aatccacgac gaccatattt acgatttcgc ttttgatgac ggccgtctga aaaacattta
     1381 tctgctggac aagaaaaacc ttgcccgcaa ccatgtgcag cttatcaacc agtttgagca
     1441 gacgggcacg catgcaaacc gttatgacgt taccgtgttg gtaaacggcc tgccgctggt
     1501 gcagattgaa ttgaaaaagc gcggtgtggc ggtgcgcgag gcattcaatc aggtgcaccg
     1561 ttacagcaaa gagagcttca acagcggaaa ttcgctgttc aaattcctgc aaatcttcgt
     1621 gatttccaac ggcacggaca cgcgctattt cgccaacacc accaagcgcg acaaaaacag
     1681 cttcgatttc acgatgaatt gggcgcggtc ggacaatcat ccgattaagg atttgaaaga
     1741 ctttaccgcc acgttcctgc aaaaaagcgt attgctgagc gttttgctgc attacagcgt
     1801 gttcgatgcg aatgatacgc tgctgattat gcggccgtac cagattgccg ccgccgaacg
     1861 cattttgtgg aaaatcaaca gctcggcgca ggcgaagaat tggagcgggc cggaaagcgg
     1921 cggctatgtt tggcatacca cgggcagcgg caaaacgctg accggcttta aggcggcgcg
     1981 tctggcgacg gaatcggcgt ttatcgacaa ggttttcttc gtggtggaca ggaaggattt
     2041 ggactatcag acgatgaagg aataccaacg tttttcgccc gacagcgtaa acggctcgga
     2101 aagtacggcg ggcttgaaac gcaatttgga aaaagacggc aacaaaatca tcgttaccac
     2161 catccaaaag ctgaacaacc tgatgaaaag tgaagataat ctgccggttt atcaccggca
     2221 ggttgtattt attttcgacg aatgccaccg ctcgcaattc ggcgaagcgc aaaaaaacct
     2281 gaaaaagaaa tttaaaaaat tctgccagtt cggctttacc ggcacgccga tttttcccga
     2341 aaacgctttg ggcgcggaaa ccacggcggg cgtgttcggg cgggagctgc attcttatgt
     2401 gattaccgat gccatccgcg atgaaaaagt attgaaattc aaagtggatt acaacgatgt
     2461 gcgcccgcag ttcaaagccg tggaagcgga acaggacgag aaggaactga gtgccgccga
     2521 aaaccgccaa gccctgctgc accccgaacg catccgcgaa atcacgcaat atatcctgag
     2581 ccggttcagg cagaaaacgc accgcttgaa tgcgggcggc aaaggcttca acgccatgtt
     2641 tgccgtcagc agcgtggatg cggcgaagtg ctattacgaa gcgttcaaaa cacaacaggc
     2701 aggcagcctg cacccgttga aaacagccac cattttttcc tttgccgcca acgaagagca
     2761 aaacgccgtc ggtgaaattg ttgacgagac ctttgaaccg gaagcgatgg acagcagcgc
     2821 gaaagaattt ttgcaggctg ccatcaacga ttacaacgcc tgtttcaaaa ccaatttcgg
     2881 cacggacagc aaagcctttc agaactacta ccgcgatttg gcaaaacggg tgaaaaaccg
     2941 ggaagtggac ttgctgattg tggtcggcat gtttttgacg ggttttgacg caccgacgct
     3001 gaatacgctg ttcgtcgata aaaacctgcg ctatcacggc ctgatgcagg cgttttctcg
     3061 caccaaccgc atttacgatg ctaccaaaac cttcggcaac attgtctgct tccgcgactt
     3121 ggagcaggca accattgatg cgatcacgct cttcggcgac aaaaacacca aaaatgtagt
     3181 gctggaaaaa agctacgaag aatacatgaa cggctatacc gacagccaga ccggcgaagc
     3241 acggcgcggt tatctggatg tagcaaaaga attgcacgag cgtttccccg atcccgacaa
     3301 aatcgaaacg gaaaaaggca aaaaagattt tgccaaactc ttcggcgaat acctgcgggc
     3361 ggaaaacgta ttgcagaact acgatgaatt tgccgcgctg cgcgaattgc agaatgtgga
     3421 cgcggcggac gaagatgcga tgaaggcgtt tcaggaaaaa tactacctga gcgacgaaga
     3481 cgtgcaggaa atgcggaaag tgccgatgcc gtctgaaagg gcggtgcagg actaccgttc
     3541 cgcctataac gacatccgag actggctgcg ccgccaaaaa gcaggcgaac agaaagaaca
     3601 gtcaaaaatc gactgggacg atgtggtttt tgaggtggat ttgctcaaat cgcaggaaat
     3661 caatctggat tacatcctgc aactggtttt cgagcatcac aaaaaaatca aaggcaaagc
     3721 ggagctggtg gaagaaatcc gccgcatcat ccgcgccagc atcggccacc gcgccaaaga
     3781 gggcctgatt gtggatttca tcaacgatac ggatttggat aaagtgcccg acgttcccgc
     3841 catactggaa accttttaca cctacgcgca agaggtgatg cggcacgaag cggcaggatt
     3901 gattgccgcc gaaggcctga acgaaaccgc cgccaaacgc tatttgaccg gctcgctcaa
     3961 acgcggctat gccagcgaaa acggcacgga actgaccgaa accctgccga aaatgagtcc
     4021 gctcaacccg caatatctga cgaagaaaca aagcgtcttc caaaaaatcg cggcgtttgt
     4081 ggagaagttt gccggaatag gggccgatat ttgacaaaat gccgtctgaa cctttcagac
     4141 ggcatttttg attttatgcg gaggcggttt ttattttgac cttgcttttc ttaaacttca
     4201 atacggcttc ttctttcgcc gcatcccagt ctatccgcac aaagccgccg tcggcgagtt
     4261 tgccgaacag gagttcgtcg gcgagcggtt tgcggatttt ttcctgaatc aggcggtgca
     4321 tcgggcgcgc gcccatttgc gggtcgaaac ctttttctgc caagtattta cgcaatgccg
     4381 gtgtgaattc ggcttcgact tttttgtcga ggagccggtg ttcgagctgg agcaggaatt
     4441 tgtccacgac tttgacgatg atgggttcgg acaaaggtgc aaacgggatg atcgcgtcca
     4501 agcggttgcg gaactcgggc gtgaagagtt tgttgattgc ctgcatttcg tcgccgcgct
     4561 cgcgtttggc ggtaaagcct aggctgggtc ggctgaggct ttctgcgcct gcgttggtgg
     4621 tcatgatcag gatgacgttg cggaaatcgg cgctcttacc gttgttatcg gtcagtttgc
     4681 ctgcgtccat gacttgcagg aggacgttga aaatatctgg atgggctttt tcgatttcgt
     4741 ccaagagcaa cacgcaatga ggctgcttgt tgacggcttc ggtcaaaagg ccgccttgtt
     4801 caaagccgac gtagcccggt ggcgcgccga tgagtcgcga tacggcgtgg cgttccatgt
     4861 attcggacat atcaaagcgt tgcagcggta cgcccattga gtaggcaagc tgtttggcgg
     4921 cttcggtttt gccgacgccg gtagggccgg agaagaggaa gctgcctatc ggtttgtcgg
     4981 gcagggcaag gccggagcgc gacattttga cggcggcaac caacgcatcg atggcatttt
     5041 cctgaccgta aaccatgttt ttcaaatcgc ggccgaggaa ttgcaacact tgtttgtcgt
     5101 cgtgcgacac ggtcttttcg ggaatccgcg cgactttggc gatgacggtt tcgatttgcg
     5161 ctttgccgat gacttttttc cgtttggatt tgggcagaat ccgttgcgcc gcgcctgctt
     5221 cgtccattac gtcgatggct ttgtcgggca ggaagcgccc gttgatgtag cgggcggaga
     5281 gttcggcggc ggcttcgagt gcgccttgcg tgtagcggac ttggtggaag gcttcgaaca
     5341 tcggtttcaa gccgcgcagg atttgaacgg tttcggcaac ggtgggttcg accacgtcga
     5401 ttttctggaa acggcggctt agggcgtggt ctttgtcaaa aatagtacgg tattcgtcgt
     5461 aagtggttgc gccgatacag cgcaatgaac ctttcgccaa tgcgggtttg agcaggttgg
     5521 acgcgtccat cgtgccgccg ccggtgctgc ccgcgccgat gatggtgtgg atttcgtcga
     5581 tgaataaaat ggcgtgcggg attttttcga gctgtttcaa gacggatttg acccgcgctt
     5641 caaagtcgcc gcggtatttt gtgcccgcca aaagcgaacc catatccagc gcgtacactt
     5701 cggcctcttt gagcgcgtcg ggaatgtcgc cgttgacgat ttgatgtgcc aaaccgtccg
     5761 ccagcgcggt tttgcccacg cctgcttcgc cgaccaaaag cggattgttt ttgcggcggc
     5821 ggcacaggat ttgcaccagc cgttccattt cgtgtttgcg accaatcaaa ggatcgatac
     5881 ggccggcttt gacttcggcg ttgaggttga cggtgtacgc cgataaaggg tttttgcccg
     5941 gtttggtgcg gttctcatta tcgtcgtcca tgccgtctga aaaatagttg ccatcgtctt
     6001 catcttcatc gggagagccg tgggcaatac agcgcaaaac ttcaaaacgc gtaaccgatt
     6061 gcagcttgag gaaatagacg gcgtggctgt cggtttcgct catcagcgcg accaaaacgt
     6121 ccaaaggctc ggccaagcct ttgcctgccg attgggtatg caccatcgcc cgctggatga
     6181 cgcgttggaa gccgagcgtg ggccgggttt cgaccgtgtc taaaaggtgg tcgggaatca
     6241 ggggggtgtt ttcggcaacg ctggcggcga gctgttcgga caccgctttt aaatccgcac
     6301 cgcagagttt taagacgttc ggcacggcgg catcttcttc gatgagtacc aaaagcagat
     6361 gctcgaggct gataaattca taatgagcct tacgcgcctc gcggtaaagc tgctgcaaaa
     6421 tctgttccaa ttcaggggca agcatattaa atctcctcga caatacattg cagcggatgt
     6481 ccttcggctt ttgcccgctg catgacttgt tgctgtttgg tttgggcgat atcgcgcgtg
     6541 taagtgccgc acaggccttt gccttcgtga tgaaccgaga gcattaccgc taccgcctgt
     6601 tcctgcccga gcataaagat ttcggtcagg atttcaacga caaattccat cgtggtgtaa
     6661 tcgtcgttca ataaaaatac gccgtaacgt ttcggcggca gggtgttcag gcggtgcaaa
     6721 agcgtgtcgg attggtgttg cgcggtcata gcgtgtccca tttgaaagcc gcgttcagac
     6781 ggcatttttg ttgtattttc ggtactttcg cctattttcc cacttttttg aaaacatagc
     6841 ttgacgtttt gtcttaacaa atgtaaaaag acggttaagc aaaagtcggc actcgaccaa
     6901 gtatataaag ctgggtagaa acgctgaacg tttaagtttg ctgtatgcct tattttgctg
     6961 attttgttaa tttttaagta taggaagttt ctaatggcaa ccggtatcgt aaaatggttt
     7021 aacgacgcta aaggttttgg tttcatcact cctgacgaag gcggcgaaga tttgttcgca
     7081 cacttctcag cgatcaatat ggaaggtttc aaaaccctga aagaaggcca acgcgtctct
     7141 ttcgacgtaa ccaccggccc taaaggcaaa caggccgcca acattcaggc agcttaattc
     7201 ctgatgtacg gtcaaatgta tatttgaaaa cggcgggaca ggcaatgtcc cgccgttttt
     7261 gtctgccgtt ttgccgatgg cggaaaagtc cccaatcccc gcccgcctta tcctgaactt
     7321 gtgtgtaccc tgttgtgggc aagtggctta gtgttttgac ggataaggga aaatcagtgc
     7381 tgatgaaaaa aatgtgcaat gtcgccggta aaaggcggtg cggcataaaa cggcaaacgg
     7441 gcaggcacgg ggcaaaacgc gccgccttcg tcttcagacg gcatcggcag ggcgttcagc
     7501 ttccggcaac cgtcatcccc gcaatcagaa tcgaaccgat tttgttggac gaacgccgca
     7561 aagcgtcatc cgccacgccg acgatgtcgc ggtacatatc ctgcaagcgt ccggcaacgg
     7621 taatctcgtg gacggggtag gcaatcacgc cgttttccac ccaaaaaccc gccgcgccgc
     7681 gcgaatagtc gccggtgatg gtgttcgcac cctgtcccat caattcggtt accagcaatc
     7741 ccgtgcccat ttctttcagc aggtcggatt gcgtttcgtg cgtatggttc aaatacaggt
     7801 tgtgcgcgcc gccggcgttg cccgtggtct gcattccgag tttgcgcgcg ctgtaactgc
     7861 cgaggaaata gccttcgaca atgccgtttt gaatcacgaa gcgcggcgcg gtggcaacac
     7921 cttccgcatc aaaatagctg ctgcggaaag agcgggggat gtgcggttct tcgcgcaggt
     7981 tgaggaaatc gggcaggact tttttgccga tgctgtcgat caggaaactg ctttggcggt
     8041 agagcgcgcc gccggagagt gtgccgacga ggtgtccgat cagcccgccc gaaacggtgg
     8101 tatcgaagag gacggggtag ctgcctgtcg ggatgctgcg gctgccgagt cggcgcaaag
     8161 tgcggcgggc ggcggtttga ccgatggttt cggggctgtc catatccgga tggcggcagg
     8221 cggaatcgta ccagtagtcg cgctgcattc cgttttcgtc ggcggcaacg acgctgcagg
     8281 aaatgctgtg gtgcgtgctt tgccggtgtg cggcaaaacc gtgggtgttg ccgtaaacgt
     8341 attggtagtg tccggtttgc accgccgcgc cttcggagtt ttcgatgcgg ctgtccgtgt
     8401 ccaacgctgc ctgttcgcat tgttttgcca agccgacggc ggcttccgta tccaaatccc
     8461 attcgtggta aaggtcgggg tcgccgatgt gttgcgccat caactcgggg tcggcaagtc
     8521 cggcgcaacc gtcttcggcg gtgtggcggg cgatgtcggc ggcggcgcgg acggtgtcgc
     8581 gcagggcttg ttcggagaag tcggcggtgc cggcgcggcc tttgcgtttg ccgacgtaaa
     8641 cggtaatgtc cagcgatttg tcctgctgga actcgatttg ttcgatttcg cccaagcgca
     8701 cgctgacgct ttgtccgagc gattcgctga agtcggcttc ggcggcggtc gcgcccgctg
     8761 cttttgccaa gtcgagcgtg cggcggcaga ggtcgaggag ttcggaagcg gtgtggttga
     8821 acagcataac aatctttctt ggtggagcgt tgcggcattt taaccgtttc gggcggcagg
     8881 ggcaaaagcg tgccgcttgc agggcgtgcg gtgcaaaaag ccgtctgaac gcggcggcat
     8941 tctgttaaaa tacgctattg gaaaaaattc gagaatcaag atgtttgaac aagaagacga
     9001 gtggatcagc aaaacccaaa tgaaaaagca gatgaacggt ttgcaggatt tgggtatgga
     9061 actgaccagg ctctcaaacg acacgctgaa aaaaatcggt ttggatgaag atttgtacga
     9121 ggccgtcgtt acctataaaa aaattacgtc caacggcgcg ctcaaacgtc aggcgcaatt
     9181 tatcggacgt ctgatgcgcg ataccgatcc cgcgcccatc gaggcgttcc ttgccaagct
     9241 gcgcggcgac gatgcggcgc acaacgcctt tttgcaacgc gtggaacagg cgcgtgtacg
     9301 gttgttggca gacgagggcg cgctgacgca gtttatgtcc gattttccaa acgccgacgc
     9361 gggcaggctg aggacgctcg tccgcaacac caaaaaagaa caggaacagg acaaaccgcc
     9421 gaaaaacttc cgcgccctgt ttcaagaatt gaaaaccgtg atggaaaacg ggggcgcgga
     9481 aatttaggca tattttcaga cggcatccgc cgttatttag attggaagat aaaatgttgt
     9541 tccgtaaaac gaccgccgcc gttttggcgg caaccttgat actgaacggc tgtacgatga
     9601 tgttgcgggg gatgaacaac ccggtcagcc aaacaatgac ccgcaaacac gttgacaaag
     9661 accaaatccg cgccttcggt gtggttgccg aagacaatgc ccaattggaa aagggcagcc
     9721 tggtgatgat gggcgggaaa tactggttcg ccgtcaatcc cgaagattcg gcgaagctga
     9781 cgggcctttt gaaggccggg ttggacaagc ccttccaaat agttgaggat accccgagct
     9841 atgcccgcca ccaagccctg ccggtc
//
LOCUS       DAXGCP010000080         9858 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.080, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000080 DAXGCP010000000
VERSION     DAXGCP010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9858
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.080"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            9..627
                     /locus_tag="ACFJCW_001715"
                     /pseudo
     CDS             9..627
                     /locus_tag="ACFJCW_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(903..1454)
                     /locus_tag="ACFJCW_001716"
     CDS             complement(903..1454)
                     /locus_tag="ACFJCW_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151801.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNVLQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSLWEWANALPLLLKGADVVNTGNPRYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKAGGAGKADG"
     gene            1692..3164
                     /gene="pyk"
                     /locus_tag="ACFJCW_001717"
     CDS             1692..3164
                     /gene="pyk"
                     /locus_tag="ACFJCW_001717"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HFC4151802.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVAADDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQTEYPEAVSTNLAIAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            3398..4750
                     /locus_tag="ACFJCW_001718"
                     /pseudo
     CDS             3398..4750
                     /locus_tag="ACFJCW_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
     gene            complement(4833..5300)
                     /locus_tag="ACFJCW_001719"
     CDS             complement(4833..5300)
                     /locus_tag="ACFJCW_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004466844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151803.1"
                     /translation="MSIRQGKPEEEFSRKMAGCLTDLENCLEKYLEQFGPVSESIEAC
                     TAKLQEQPSFFNRLMKANDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSIHN
                     RKADYAEKGKERIALFPRGLNGITKLPAAVLLPERPYHFDMKEVLYIFSRIPR"
     gene            complement(5438..5587)
                     /locus_tag="ACFJCW_001720"
     CDS             complement(5438..5587)
                     /locus_tag="ACFJCW_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151804.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAGFSCVSYADVSTHRTAHKAS
                     PYVPS"
     gene            complement(5605..5802)
                     /locus_tag="ACFJCW_001721"
     CDS             complement(5605..5802)
                     /locus_tag="ACFJCW_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151805.1"
                     /translation="MNTVPKSRIPVKPLPEKTTAEAKVEKWRQLGADHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(5812..6828)
                     /locus_tag="ACFJCW_001722"
     CDS             complement(5812..6828)
                     /locus_tag="ACFJCW_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HFC4151806.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQDIRGSIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAEANSPLLYGETSLADIVQQKTGGNVEFKDGVLTAAVRFLPAKDARTAFIDNTV
                     GMATQTLSAALLPYGVKSIVMIDGKAVTKEDAVRVLSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDVERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(6927..8141)
                     /gene="gltS"
                     /locus_tag="ACFJCW_001723"
     CDS             complement(6927..8141)
                     /gene="gltS"
                     /locus_tag="ACFJCW_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HFC4151807.1"
                     /translation="MEWAFNSYYTLIAATLVLLVGKVLVKKIKILRDFNIPEPVAGGL
                     IAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENTKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGSVTVILAVQTAVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(8492..8687)
                     /locus_tag="ACFJCW_001724"
                     /pseudo
     CDS             complement(8492..8687)
                     /locus_tag="ACFJCW_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(8694..>9858)
                     /locus_tag="ACFJCW_001725"
     CDS             complement(8694..>9858)
                     /locus_tag="ACFJCW_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC4151808.1"
                     /translation="TKTEYWYRIFLETEMSNNQPNSQIYEDYWAFTNAFTNYNDQKFC
                     TALNICLDFIDANQDQPYSNELYEALQQNIAQDSVMASQRTSKAMNLASVRKAINQFV
                     KMGFIEPFLSSYTPLSRDYVQARTNRKRQTLLSKIVSHSGFQRSVTENSNIRQINFLI
                     KTLVEHPQGKLNKKEIAAMMLVDLKTFQQDYLTETELNDYFQQGIESGFIERKYNQIS
                     YLWNLLDKLDDLKRVGDDLYFAEDAQRIFGNLDEITVRKRDPYLHRLYKNQLQEESEE
                     HYGNVKCMLEKLAYPVLIASHIKPFILSDDTEAYDPNNGLLLSRTLDSLFDLKYISFD
                     DEGNMVKSKRLSDDVWRRWCDVKLDNNLLNDKRKSYLAYHRELMLQEDQEFHI"
BASE COUNT         2521 a         2745 c         2345 g         2247 t
ORIGIN      
        1 atgcggcttt gattggtttc gccccaaata tagtttttgc ttggcctatg tttgttgacc
       61 cccgcttctt accaaaacat ccatgtacgg agttggaaag cacggcgaga ttccggcata
      121 gtaaaacaag atttggattt ttcttgcggc gcggcttcga ttgccacgtt actgaataat
      181 ttttatggca gacattattc tgaagcggaa atcttagaca aaatggataa aacccaaatg
      241 cgtacttctt ttgatgatat gcaacgcata atgcccgaac tgggttttga agcacaaggt
      301 tatgctttgc catttgaaca gttggtacaa ctaaaaattc ctgtaattgt gtatttaaaa
      361 taccgtaaaa acaaccattt ttcggtattg aacggtatta acggagaaac tgttttgctg
      421 gctgatccat cgctggggca cgtctcaacg agcaaatcac aattcttgag cgcatggaaa
      481 acacgtgatg gcgaaatgga aggaaaaatt ttagccatcg tgccaaaaaa tactgatttt
      541 gttagaaatc agatgttttt taataaaaat cccgttcgtc aaacacgttt tacggtagaa
      601 caaatccaaa tgcggcaaaa acgataataa accgattttt gcccatttat tttatatagt
      661 ggattaacaa aaatcaggac aaggcggcgg gccgcagacg gtacaaatgg tacggaaccg
      721 gttcgcccgg tgcttgggcg ccttagggaa tcgttccctt tgggccgggg cggggcaacg
      781 ccgtaccggt ttttgttaat ccgctataaa agcaaagaaa ccgccattag cactacaccc
      841 ccccaaactg cggctgccaa acacatcggc tgcttctcga cgcacccgct gaaaaatgcg
      901 ccctatccgt ccgccttgcc cgcaccccct gcctttgccg ccctgcccga tgccgtctga
      961 agcctgaacc gccccaccag cccgatgacg cacgacaccg ccggaaaggg catacacaaa
     1021 gccgtcagca cataacgcgg attccccgta ttgaccacgt ccgcgccctt cagcagcagc
     1081 ggcagcgcgt tcgcccactc ccacagcgaa ggcgcgctga acgccaatac cgccaccagc
     1141 cccaacatcc ggaacacccc gatttccaag acctgccgcc gccgcaccga acggttgagc
     1201 agaaacacaa ccgccaaccc gaaacagacc accgccgcca taccgccgtt ggcgacaatc
     1261 tgcaaactgt tgaacgcaat atcgggcgta accgccaaca cgccttccga atccggcacg
     1321 gcacgctgca aatccaaccc ctgcaacaca ttcaacacaa aaccgtagat caaatcaaaa
     1381 aacaccacgc ctatcggcaa agcactcaaa acccgccaca tcttcctgtc cgaccaaccg
     1441 ttcaaaacct tcattttacc cgaccgcgca agccgccgaa caaaaaataa atttagccta
     1501 aatcataaaa ccgtgtaatt ttgcaccaaa aaaggcggtt tgcaggtaaa atatcaaacc
     1561 attaatttaa atcatatttt tacagaatat tccgccgcgt tcaccaaatg gacatcaaac
     1621 cggttccaaa tttctgtaat tttgcaacaa aataccgcaa aacacccgat tgagaccgaa
     1681 aggactttca tatgaaccag acaagccgcg atctgacccg catcagccac aacactaaaa
     1741 tcgtcgccac ccttgggccg ggcagcaaca acgtcgaact gttggaagac atgatccgcg
     1801 tcggcggcct gaacgtcgtc cgcttcaact tcagccacgg cacgcccgaa ttccatcagg
     1861 aaaacgcccg catcgtgcgc gaggcggcaa aacgcgccgg acaggaaatc gccatcattg
     1921 ccgatctgca gggcccgaaa atccgcgtgg gcaaaatcgc cggcggcggc atcgaattaa
     1981 acaaaggcga aacgctggta ctggatgccg cgcttgaagg cgaaggcacg cgcgaggcgg
     2041 tcggtttgga ctaccgcgac ctgcccgacg acgttgccgc agacgatgtc ttgtggctgg
     2101 acgacggcct gctgaccctg accgtggaat ccgtcgaagg cagcaggatt atcacaaggg
     2161 tggaaaacag ccacgtcctg aaaagcaaca aaggcatcaa caaacgcggc ggcggtctgt
     2221 ccgcaggcgc gttgaccgaa aaagacttcc gcgacctgaa aaccgcgatt gccatcggtt
     2281 gcgactacct cgccatcagc tttgtgaaat ccgccgaaga tttgcacatc gcgcgcgcca
     2341 aagtcgaaga ggaaatgaag ggcagcactg ccgtccgccc cggtttggtt tccaaaatcg
     2401 aacgcgtaga agcgattgaa aaccttgatg aaatcatcct tgccggcgac ggcattatgg
     2461 ttgcgcgcgg cgacttggcg gtcgaagtcg gacacgccgc cgtccccgcc ctgcaaaaac
     2521 ggatgatccg ccgcgcccgc gagttgcgcc gcttcagcat tacggcgacg caaatgatgg
     2581 aatcgatgat taccaacccc gtgccgaccc gcgcggaagt cagcgatgtg gcaaacgcgg
     2641 tattggacgg caccgatgcg gtgatgtgtt ccgccgaaac cgccgtcggc gcgtatccgt
     2701 ttgaaaccgt cagccaaatg gcgattatct gcgcggctgc ggaaaaagag caggattcgc
     2761 tcaacggcgt tgccgaacag acggagtatc ccgaagccgt cagcaccaac ttagcgattg
     2821 ccggcggcgc ggtcagcgtg gcgcgcgcgg ttcacgccaa agccatcgtc gccctgaccg
     2881 aaagcggttc gaccgccttt gaaatcagcc gccacaatat taccctgccg attttcgcgc
     2941 tgaccccgag cgtttccgcc caacgccgta tggcgatgta ccggggcgtg cgcccgctga
     3001 ttttggcaac cagcaccgac cacgacacgg cgttgaacga agtcgaaacg atgctggtgg
     3061 aacacaacat cctgcattcc ggcgaccagt acatcatcac cagcggctcg caaatgcgcg
     3121 aatccggttc gaccaatacg ctggaagtgc tgcgcgtcaa ataatccgcc ctgagtggaa
     3181 aataccgtct aaagccgata ctgtcgggct tcagacggca ttttatttgc attccgtcag
     3241 gtaaaaccga aagaattgtg caaatccggc aacatcggat aaaatcgagt gcctatacta
     3301 aagcgaaaca aggcatttcc gactgccttt tttatttgtc caccgtccgc ctttttacgg
     3361 aaaccgaaat gacccctttc acactgaaaa aaccgtcctg ctgctcggca ctgcctttgc
     3421 cgccgcatct gtccacgcat ccggctacca cttcggcaca cagtcggtca acgcgcaaag
     3481 cacggcaaat gccgccgacg cgtcgaccat cttctacaat cccgccggcc tgaccaaact
     3541 cgacagcagc cagatttccg tcaacgccaa catcgtgctg cccagcattc attatgaagc
     3601 agattccgcc accgacttta ccgggcttcc cgtccaaggt tctaaaaacg gcaaaatcac
     3661 caaaaccacg gtcgcacccc acatttacgg cgcatacaaa gtcaacgaca atctgaccgt
     3721 gggcttgggc gtgtacgtcc ccttcggctc tgccaccgaa tacgaaaaag attccgtgtt
     3781 gcgccacaac atcaacaaac tcggtctgac cagcatcgcc gtcgaacctg tcgccgcgtg
     3841 gaaactcaac gaacgccatt ccttcggcgc aggcatcatc gcccaacata attccgccga
     3901 actgcgcaaa tatgccgact gaggaatccc aaaaaaagcg caaatgctgc aagcaacacc
     3961 ttctaatcct actgccgctg ctcaaatcaa ggccgacgga cacgccgatg tcaaaggcag
     4021 cgattggggc gtcggctacc aactggcgtg gatgtgggac atcaacgacc gcgcgcgcgt
     4081 gggcgtgaac taccgttcca aagtttcaca cacgctcaaa ggcgatgccg aatgggcggc
     4141 agacggcgcg gcggcgaaac aacagtggaa tgacaatatg ctcacaccgc tcggttacac
     4201 ggcgaatgaa aaagcccgcg tcaaaatcgt aacgcctgag tctttgtccg tacacggcat
     4261 gtacaaagtg tccgacaaag ccgacctgtt cggcgacgta acttggacgc gccacagccg
     4321 cttcaataag gcggaactgt tttttgaaaa agaaaaaaat attgctaatg gcaaaaaatc
     4381 cgaccgcacc accatcaccc ccaactggcg caacacctac aaagtcggct tgggcggttc
     4441 ttatcaaatc agcgaaccgc tgcaactgcg cgtcggcatc gcttttgaca aaccgcccgt
     4501 ccgcaacgcc gactaccgca tgaacagcct gcccgacggc aaccgcatct ggttctccgc
     4561 cggcatgaaa taccatatcg gcaaaaacca cgtcgtcgat gccgcctaca cccacatcca
     4621 catcaacgac accagctacc gcacggcgaa ggcaagcggc aacgatgtgg acagcaaagg
     4681 tgcgtcttgc gcacgtttca aaaaccacgc cgacatcatc gacctgcaat acacctacaa
     4741 attcaaataa acgttacacc gtttgaatat aaaaatgccg tctgaaacag atttccgttt
     4801 cagacggcat ttttatccgg cagccgatac gcctatctcg gtattcggga gaatatatac
     4861 agaacctcct tcatatcaaa atggtaggga cgctcgggca acaggacggc ggcaggcagc
     4921 ttggtgatgc cgttcaaacc gcgcgggaac agcgcaatcc gctctttgcc cttttccgca
     4981 taatctgctt tgcggttgtg gatggaaact acttcgcgat ggcggtaaag cagcgtgttc
     5041 atttcgatat aggcttcgtt gtggatggct gccgactgtt tctgcaacac gtcaatctgc
     5101 ctgttgagct tgtcgttggc tttcatcagc ctgttgaaga acgacggttg ctcctgcagt
     5161 ttggcggtac aggcttcgat actttccgat accggcccga actgttcgag gtatttttcc
     5221 agacagtttt ccaagtcggt caggcagccg gccatcttgc gggaaaattc ttcttcaggc
     5281 tttccctgcc gaatggacaa tatagcggat taacaaaaat caggacaagg cgacaaagcc
     5341 gcagacagta caaatagtac ggcaaggcaa ggcgaggcaa cgccgtaccg gtttttgtta
     5401 atccactata tttgggaggg gcgtaacccc ttccgaatca ggatggcaca tagggcgacg
     5461 ctttatgtgc cgtcctgtgt gttgaaacat cagcatagga aacacaggaa aagccggctg
     5521 ttttgcgcct gcgtaccgta ttggtcaaaa tgccgtctga aaccgacaac agggtttcag
     5581 acggcatttc cgtcaatttt ccctttatct gccgaacagg ttggcgatat tttccatctg
     5641 ttcttcggta aaaccgtttt cgcccaatct ggcggcaact gcccattcgc ccgacaaacc
     5701 gtggtccgca ccgagctgcc gccatttttc gactttggct tcggctgtgg ttttttcggg
     5761 cagcggtttg acgggaatcc tgcttttggg gacggtattc atcggtttgc cctaatcgat
     5821 ggaatagccg cgaagatact gtatccgttc gcgcgtcatc cgcgtgtcgc attggagctt
     5881 gaggtattcg gcgtattcct gccggtctgc ctgcgcggcg gcttgtcggc agttgctgat
     5941 tttttcctgc gcccacttgc gctgttcgcc gaccaactct ttttgcacgt cggtatcgag
     6001 tcctccccaa agtttggtaa tttcggattc cgcacgttgg ttttgtacgc gcgcctcttc
     6061 cacttcgccc cgtgatacgg taacggtatc ggcacgctcg acgtcgtcgg gatgcaggat
     6121 ttcgggttcg ggcgcgcctt ctgcggcttg gggtacgccc gcatcgccgc cggcggcatt
     6181 gtgttccaaa atgtcttcgg gggtgggttt ggacggttct tcttcacggg ctttgccgct
     6241 caaaaccctg accgcgtctt cttttgtcac cgccttgccg tctatcatca cgatgctctt
     6301 cacgccgtaa ggcagcaacg cggcagacag cgtttgcgtc gccataccga ccgtgttgtc
     6361 gataaatgcc gtccgagcgt ctttggcggg caggaagcgg acggctgccg tcaatacgcc
     6421 gtctttaaac tcgacattgc cgcccgtctt ctgctgcacg atgtctgcca aagacgtttc
     6481 cccatacagc agggggctgt ttgcctcggc atcggcaagc gtttcagacg gcacggtaat
     6541 gttcaaatcg gcgatacaga acgtgcgccc gccttcctgc gtttccgaag cgtgttccaa
     6601 agaaaacgcc aaaccgtagg cggcggcgat aattttgtcg gcatcgacaa actgcctgcc
     6661 gtcttcgcgc gcgaaagaac gcgcttcctg cgtgagcgtt tcctgaatac tgccgcgtat
     6721 gtcctgcaac acggcggggt tggcgcattc caacgccttg ggcggttctt ccctgccgca
     6781 cgctgcaagc agcagggcaa acggcagcgc aatgagtttc cgatacatga tgttccttcc
     6841 aaacggtgca gaccgatggc ggctatcata gcaaaagcac ctgcaggcgg taaaccttgc
     6901 aggcgctttg tcggaaaggc ggaaaatcag cctttaaaga aattcacaaa accggtgaga
     6961 atcgcggcat taatcaaatc gacaaagaac gcgccgacca taggcacaat caaaaacgcc
     7021 ttatgcgacg cgccgaaagt atgcgtgacg gactgcatat ttgccaccgc cgtcggcgtt
     7081 gcgcccaaac cgaaaccgca gtggccggca gccaatactg cggcatcata gtcgcgcccc
     7141 ataaagacat aggtaacaaa agtcgcgtac aaaaccatca ctgcggtttg tactgcaaga
     7201 atcacggtta cagaccccgc caaaccggtc agctcccaca gtttcaaatt cagcaacgcc
     7261 attgccaaga aaagcgaaag cgaagcattg ccgaacacat cgatggcacg gtcgaacata
     7321 ttgaccttga atgcggcggt aaggatgttg cggataacca cgccgccaaa cagacaccac
     7381 acgaatttgg gcaggtcgaa caggtattct ttgtcgaagc cgtccataat ctcggcaaac
     7441 gccagacacg cggcaaacat ggcaagcgtt tcaacggcag attccgccgt aatcaggcgg
     7501 gtgcgttttg cctgctcgaa cacgtcgtcc gcgttgtcgt cctgatcctg ttttgtgttt
     7561 tcaaccggtt tgcggcccat tttgttgatc aggcggcgcg caaccggccc gccgatcagg
     7621 ccgccgaaca ccagcccgaa agtagccgaa gcaataccca aaccggttgc gccgaccaag
     7681 ccgtattgcg tttcaaaatt aggtccccac gcacctgacg tgccgtgtcc gcccgtcagc
     7741 gacaccgaac cggtaatcag accgatgagc gggtccaaac ccaaagccgt agccagtccg
     7801 accccgacaa agttttgcac caagataaat ccgcccacaa tcgcggtaaa aaccaccagc
     7861 ggcaaaccgc ccgccttcaa acgggaaaaa tccgcgctca agccgatgga cgtgaagaaa
     7921 atcagcataa acgcattttg cagcggtttc tcaaatttga agctcacgcc gtacgcctcg
     7981 tgcagcgcaa acaggataat cgcggcaatc agcccgcccg ccacgggttc ggggatgtta
     8041 aaatcacgca agattttgat tttcttaacc aaaaccttgc cgaccaacaa aaccaaagtg
     8101 gcggcaatca aggtgtaata actgttaaac gcccattcca tatcgtttga cctcctaaaa
     8161 tgtttttctt tatatccgcc cgaaggggac gcaagcgcga agatattagg ggaatagtta
     8221 aggcttgtca aagaatcgcc gttttttata gtggattaaa tttaaaccag tacatcgttg
     8281 actcgccttg ccgtactatc tgtactgtct gtggcttcgt cgccttgtcc tgatttaaat
     8341 ttaatccact atacaactat tttttacaaa caaaatgccg tccgaaactc cgttcagacg
     8401 gcatcatggg aatacacata tttgaaataa cagaaaaagc gggggcaaaa cccgccgctg
     8461 catctgtcgc tgtacatccc tgctgtcgga cttaccgctt caacttcgca aacgcatccg
     8521 ccatcgccga attggttggg acacgctcgt tgcgttgtgg tttgcggccg gctgtccgtt
     8581 cgcggctgcg gtttttccag ctcggacaga atgtccagaa tggtcggcag tccgaagtgt
     8641 tcgtcggtga agtcggacgc tttgatttgc ttcacgcgct cgcggttaac tgcctaaata
     8701 tgaaattctt ggtcttcttg tagcataagt tctcgatgat atgccaagta agatttacgt
     8761 ttgtcgttga gcagattgtt atctagcttc acatcacacc aacgtcgcca aacatcatct
     8821 gataaccgct tagatttcac catatttcct tcatcatcaa acgaaatata tttcaaatca
     8881 aataggctat ccaaggtacg acttaatagc aagccgttat ttgggtcgta tgcttcggta
     8941 tcatccgaca ggatgaaagg cttaatatga ctggcaatca atacaggata ggcaagtttt
     9001 tccagcatac atttcacatt accgtaatgt tcttcacttt cttcttgaag ttggtttttg
     9061 tataggcgat gtaaataagg gtcgcgtttc cttacagtaa tttcatccaa attaccaaaa
     9121 atacgttggg catcctcagc aaaatataag tcatcaccta ctcgttttaa gtcgtctaat
     9181 ttgtctaata ggttccataa ataacttatt tgattgtatt ttcgttcaat aaatcctgat
     9241 tctattccct gttgaaaata atcattcaat tctgtttcgg ttagataatc ttgttgaaag
     9301 gtttttaagt ctactaacat catggcggca atttcttttt tatttagctt gccttgtgga
     9361 tgctcgacca gcgttttaat caggaaattt atttgtcgaa tattagagtt ttcagttact
     9421 gaacgctgaa agccagagtg cgatacgatt ttggaaagta gggtttgtcg ttttcggtta
     9481 gtacgagctt gtacataatc tcgtgataaa ggtgtatagc ttgataaaaa cggttctata
     9541 aatcccattt ttacaaattg attaatagct ttacgaaccg aggccaaatt catggccttg
     9601 cttgttctct gcgaagccat aacggaatct tgggcaatgt tttgctgcaa tgcttcatat
     9661 agttcgttgc tgtatggctg gtcttgattc gcatcaataa agtcaagaca aatattgagt
     9721 gcagtacaaa atttttgatc gttataattt gtaaaggcat tggtaaacgc ccaataatct
     9781 tcataaattt ggctgtttgg ctgattatta ctcatctctg tctccaagaa tattcgatac
     9841 caatattctg tttttgta
//
LOCUS       DAXGCP010000081         9629 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.081, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000081 DAXGCP010000000
VERSION     DAXGCP010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9629
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.081"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(165..398)
                     /locus_tag="ACFJCW_001726"
     CDS             complement(165..398)
                     /locus_tag="ACFJCW_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HFC4151809.1"
                     /translation="MKLTLMFREYCSLCHKMRDALKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELIPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(416..550)
                     /locus_tag="ACFJCW_001727"
     CDS             complement(416..550)
                     /locus_tag="ACFJCW_001727"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151810.1"
                     /translation="MPSELFRRHFCCFWQDLSIIFLEDIVFSQIDHDSAASKALACAN
                     "
     gene            complement(564..764)
                     /locus_tag="ACFJCW_001728"
     CDS             complement(564..764)
                     /locus_tag="ACFJCW_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HFC4151811.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(936..1811)
                     /gene="xerD"
                     /locus_tag="ACFJCW_001729"
     CDS             complement(936..1811)
                     /gene="xerD"
                     /locus_tag="ACFJCW_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HFC4151812.1"
                     /translation="MENGLIDRLLETLWLDRRLSRNTLDSYRRDLEKIARRLSLCGRT
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYVWMEREGMRADNPTRLLKPPKIDR
                     NIPTLITEQQISRLLAAPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITTLGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRSCDALFVSQKKTGISRQLA
                     WMIVKEYAGRAGIGHISPHSLRHAFATHLVRHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVRLHSVVKEHHSRN"
     gene            complement(1863..2303)
                     /locus_tag="ACFJCW_001730"
     CDS             complement(1863..2303)
                     /locus_tag="ACFJCW_001730"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HFC4151813.1"
                     /translation="MDMKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIVREWRKVKVAGHAQEVLETLSR"
     gene            2624..3562
                     /locus_tag="ACFJCW_001731"
     CDS             2624..3562
                     /locus_tag="ACFJCW_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HFC4151814.1"
                     /translation="MSIRTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIYPADTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRLKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3691..3984
                     /gene="hfq"
                     /locus_tag="ACFJCW_001732"
     CDS             3691..3984
                     /gene="hfq"
                     /locus_tag="ACFJCW_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HFC4151815.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENKPQAAPASTLVQVETVQQPAE"
     gene            4069..4635
                     /locus_tag="ACFJCW_001733"
                     /pseudo
     CDS             4069..4635
                     /locus_tag="ACFJCW_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
     gene            4689..5063
                     /locus_tag="ACFJCW_001734"
     CDS             4689..5063
                     /locus_tag="ACFJCW_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HFC4151816.1"
                     /translation="MQYLIVKYSHQIFVTITILVFNIRFFLLWKNPEKPLVGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLFAYIALGMVMMRARPRSTKFYTV
                     YLLAMCCIACIVYLAKTKVLPF"
     gene            5073..5567
                     /gene="folK"
                     /locus_tag="ACFJCW_001735"
     CDS             5073..5567
                     /gene="folK"
                     /locus_tag="ACFJCW_001735"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HFC4151817.1"
                     /translation="MNNRHFAVIALGSNLDNPAQQIRGALDALSSHPDIRLEQASSLY
                     MTAPVGYDNQPDFINAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDPRLTLPHPRAHERSFVIRPLAEILPDFILGKYGKVVELSKRLGNQGIRL
                     LPDR"
     gene            complement(5695..6174)
                     /locus_tag="ACFJCW_001736"
     CDS             complement(5695..6174)
                     /locus_tag="ACFJCW_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HFC4151818.1"
                     /translation="MPESIFKQISSDILRLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVETGILLIEDESRNLRLSWVGSARELDRKDNAYKRALSALSRKL
                     GRCKDKLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(6394..7131)
                     /gene="ubiE"
                     /locus_tag="ACFJCW_001737"
     CDS             complement(6394..7131)
                     /gene="ubiE"
                     /locus_tag="ACFJCW_001737"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HFC4151819.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTIHTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTYKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGRLIAKDADSYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7174..7542)
                     /locus_tag="ACFJCW_001738"
     CDS             complement(7174..7542)
                     /locus_tag="ACFJCW_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HFC4151820.1"
                     /translation="MNNIPVEIRLLKNRAVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQITDLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7662..9281
                     /gene="mnmC"
                     /locus_tag="ACFJCW_001739"
     CDS             7662..9281
                     /gene="mnmC"
                     /locus_tag="ACFJCW_001739"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HFC4151821.1"
                     /translation="MDNLVWDGIPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDSECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKSDKPWFALPQTSERKKPEHVLVIGAGIAGASTAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTGQTELLLAGYGYTKRLLGHILPDSDTWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITSAEAEKIAGIPLNTPYAEPLCGLYWQHGVW
                     LNPPAFVRTLLSHPLIELYENTTLTGISHDGEKWIASTPNGTFTATHIIYCTGAHSPC
                     LPETNLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SNTGWNEAEEASNRQALAHLNPALAESLFAANPNPQKHQGHAAIRCDSPDHLPVVGAL
                     GDIAAMRQTYAKLALDKNYRIDTTCPYLPNAYTNTAHGTRGLATAPICAAAVAAEILG
                     LPHLFSQRLRHALHPNRTVIRAIVRRQNLIP"
     gene            complement(9278..9427)
                     /locus_tag="ACFJCW_001740"
     CDS             complement(9278..9427)
                     /locus_tag="ACFJCW_001740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151822.1"
                     /translation="MDSKGNLLGIPYSLFWEENVMGVFDILPSGLVCLFEYDFLWSGR
                     HAAKA"
BASE COUNT         2547 a         2965 c         1969 g         2148 t
ORIGIN      
        1 aaataaaata aagaaagggt caatatgcaa caccgtagaa gattggcaat ttaccaggca
       61 tccaaacgtg cttcctttac cggcaggtca tcagccccac aaaaacgtaa agaacgttga
      121 tttgaaaaaa atgccgtctg aagtcctgct tcagacggca ttttttaccg ttcgagaaac
      181 tgtttcaacc tgtcctcatc caaaaaccag tggcaaattt cctcatctcc cgccaacaaa
      241 acgggaatca gctcattgta tttttcttcc aaaacaggat tttcatccac atcgaccact
      301 tccagcccga acccgtattc atcctgaaaa ggtttgagtg catcgcgcat tttgtggcac
      361 aagctgcaat attcacgaaa catcaaggtc aatttcatcc gcgtttcctt atctgtcaat
      421 ttgcacacgc caaagcctta gacgcagcag aatcatggtc tatttgggaa aaaacaatgt
      481 cttcgaggaa gatgatactc aagtcctgcc aaaaacagca aaaatgccgt ctgaacagtt
      541 cagacggcat ttccaaaacc gttttacgct tgaacgttga tacccgccgt aaccgtcggt
      601 tgcgcattgt gcgccgtcag aaacgaagcg gcaagctccc cgcagcagcc gcagcagctc
      661 gccacgccca attgcgactg caaatcgccc attgtggtcg cgccggcagc gatggtttcc
      721 ttgatttgat ggtcggtaac ggcattgcag atgcagacaa acattttgtg ctccgtgtgt
      781 tctcaaacta tcgtaccgat agcggctttt attatcgtat gcaaatataa ataaaaacgg
      841 ttcgcattgc aaggtcggca tacacggttt gtcttggtaa ttttttatca agtttgcatt
      901 ttcgattgat ttcttattaa accgaagcag aagcctcagt ttcgggaatg gtgttcctta
      961 accacgctat gcagccgcac attggcaaca tgggtataaa tctgagtcgt gttcaaatcg
     1021 gcgtgtccca acatatcctg aactacgcgc aaatccaatc cgtgccgcac cagatgcgtg
     1081 gcaaaggcgt ggcgcaggct gtgcgggctg atgtgcccga tgcctgccct gccggcatat
     1141 tctttgacaa tcatccacgc caactgccgg gaaatgcccg tttttttctg actgacaaac
     1201 aatgcgtcgc aactcctgcc tttcagcaga agcgggcgtg cctccgtata atagcgttcc
     1261 acccaatacg ctgactcctg tcccatcggg accatcctct gcttatcgcc cttgcccagc
     1321 gtggtaatac aacccctgtc caaatccaca ttgccgaaat tcagcccgac cgcctcgctg
     1381 acgcgcaagc cggtcgcgta catcaattcg agcagggcct tatcccgcaa accgtgcggc
     1441 gtgtcggtat ccggtgcggc aagcagtcgg gaaatctgct gttctgtaat cagtgtcggg
     1501 atgtttctgt cgatttttgg cggtttcagc aggcgggtgg gattgtccgc cctcatccct
     1561 tcccgttcca tccacacata caggcgtttg cacgccgaca gtgcgcgtgc ctgcgaactc
     1621 cgttgctccc cgtcaacata aaccgccgcc gccaaatctg cttcgtccgc atccttcagc
     1681 gttctgccgc acaaagacag ccggcgggcg atcttttcca aatcccgccg gtagctgtcc
     1741 aaagtattcc gactgagccg ccgatccaac cacaaagttt ccagcagcct gtcaatcaaa
     1801 ccgttttcca taacgttcca aaccaatgcc gtctgaatct tcttcagacg gcatggttca
     1861 catcatcggg aaagcgtttc caacacttcc tgtgcatgac ccgccacttt gactttccgc
     1921 cactcccgga caatttcgcc gtccttgttc agaacgaacg tactgcgctc gatgcctaac
     1981 gactctttcc catacagttt tttcaatttg atgacatcaa acaggcggca caccgtttca
     2041 tccttgtcgc tcaacagctc gaaccggaaa ccctgcttgg cgcaaaaatt ctgatgcgcc
     2101 tttacgccgt cgcgggaaat accgaccacg gtataaccca atgcctcaaa ctgttccaaa
     2161 cgcgcattaa aatccaagcc ttccgtcgta cagcccggcg tactgtcttt cggataaaaa
     2221 tacacgacca aaggcagatg ttctgccgaa tgaaaatccg caccgctgct cgaaggcagg
     2281 gtaaattcat atttcatatc catagtccta ctcccgatat tcccattatt caaaacggca
     2341 cgcagacgca ccgccgcaat tgccaaacca accccgattc taccgcccca aaggacaagg
     2401 attcaaccgc cggaaacatc caaaccgaca cacgacggca tgaaaaatat ccatgtcaaa
     2461 ccacaaaata tgttccgatt taaaaacaga atgttataaa acccaactcc aaaaacacaa
     2521 caagaccgcc cgcctacggg cagtctcctg tcagacgaca tactttacag atggctgttt
     2581 tttcaacaaa ataacgccaa tactcaaaaa tacggaacca aaaatgtcca tccgcaccct
     2641 gaaacgcctg ccctcatcgc tgctgctcgg cctctgcctt tccctgccgt cagcccacct
     2701 ttttgccgac aacgacattt tagggcaatt tttagaacag aacatgctta cctcctccga
     2761 tccgatagaa atattcgccg aaagcacgat atatcccgcc gatacccagg ccattacggg
     2821 cgggctgatt ctgtcctccc aatccgcact ggtcgtcaac aacaaaacag ggcaaatact
     2881 gtatcagaaa aacgccgaca ggattatgcc cattgcctcc atttccaagc tcatgagcgc
     2941 gatggtcgtt ttggatgcaa acttggacat gaacgaaacc gttaccatca cacccgacga
     3001 aatcgaccgc ctcaaaggga ccggcagccg tcttgccata ggtacggcac ttacacgtaa
     3061 agaactgctg caccttagcc tgatgagcag cgaaaaccgc gccacccatg cattgggcag
     3121 aacctaccca ggcggcatgg gcgcatttgt cgccgccatg aaccgcaaag cccaaagcct
     3181 gggcatgtac ggcagccgct tttacgaacc gaccggactc aacttccaaa acgtttccac
     3241 cgccaaagac ctgagcctca tggtcaacgc cgccgcccaa tatccgcaaa tccgcaccaa
     3301 ctcgacttcc aactacgcct cggtacaaac caaaaacggg cagcaaaact ataaaaactc
     3361 caatgccctg gtcagggaag gcatgtggaa catcgaattg cagaaaaccg gctacatccg
     3421 cgaggcaggc aggtctatgg ttgtcaaagc caacattcaa aaccaacccg ttaccatcgt
     3481 attgctgaac tcgcccacat ccgccacacg cgtcaacgac gcccgcaaaa tcgaatcgtg
     3541 gatgctgcag caacgctcct gacatacaaa tgcccggcgg aaaaccgccc aaacacaaaa
     3601 aaattggtaa tttttcctat tccaggctac aattcgacac gcacagggca tctgcccgat
     3661 ttcacaatca taatagcgga gttaaaaaat atgacagcta aaggacaaat gttgcaagat
     3721 cccttcctga acgcattgcg taaagagcat gttccggttt cgatttactt agttaacggt
     3781 atcaaattgc aaggtcaggt cgaatctttc gaccaatacg tcgttcttct gagaaacact
     3841 tccgtaaccc aaatggttta caaacacgcc atttccacca tcgtaccggc tcgctccgtc
     3901 aacctccaac atgaaaacaa accccaagcc gcaccggctt cgacccttgt ccaagtggaa
     3961 accgtccagc agcctgccga ataatccgca cgaagcatga cgtgtcatat ctttcaatac
     4021 cttaccggac aacggtaagg tatttttatt ttcaggcggc atttaaaaat attattgaaa
     4081 aacatccttc cattcgccca ttgccttttg cgggaggcac ttcccgaagg cggcaatgcg
     4141 ctggacggca ccgccggcaa cggacacgac acccttttcc tcgcacaaac cgcaggcaac
     4201 agggggaaag tgtgggcatt cgacatccag ccgcaagccc tgaacaacac ccgatgccgt
     4261 ctgcaggaag caggttacag caatgtacgg ctcatcttgg acggacatga aaacctgaag
     4321 caatatattc cggagccgct ggatgcagcc gttttcaatt tcggctggtt gcccggaggc
     4381 gacaagaatc tgaccaccga caaggaaacc agcattcccg ccctttgagc aaccctctcc
     4441 ctgctgaaag aagacggtat gcttattgcc gtcctctatc cgggacacga aaacggcaaa
     4501 caggaggcag aagccgtcgg acaatgggca aaaaacctgc ctcaagaaca gtttgccgtt
     4561 ttacgttacg gctttaccaa ccggaagaat agcccaccct atcttttggc atttgaaaaa
     4621 ctgcgtcaaa aataactgtt tgcggtaaaa taagccgatt ctaaccctta ttttgatacg
     4681 agccgaccat gcagtatctg attgtcaaat acagccatca aatcttcgtt accatcacca
     4741 ttttggtatt caacatccgt tttttcctac tttggaaaaa tccagaaaag cccttggtcg
     4801 gcttttggaa agcactgccc cacctcaacg acacgatgct gctgtttacg ggattgtggc
     4861 tgatgaagat tacccatttc tccccgttca acgcgccttg gctcggcaca aaaatcctgc
     4921 tcctgttcgc ctacatcgca ctgggcatgg taatgatgcg cgcccgtccg cgttcgacca
     4981 agttctacac cgtttacctg ctcgctatgt gttgcatcgc ctgcatcgtt taccttgcca
     5041 aaaccaaagt cctgccattc tgaaacactg ccatgaacaa cagacatttt gccgtcatcg
     5101 ccttgggcag caaccttgac aaccccgcac aacaaatacg cggcgcatta gacgcgctct
     5161 cgtcccatcc tgacatccgg cttgaacagg cttcctcact gtatatgacc gcacccgtcg
     5221 gttacgacaa tcagcccgat ttcatcaatg ccgtctgcac cgtttccacc accttggacg
     5281 gcattgccct gcttgccgaa ctcaaccgta tcgaagccga tttcggacgc gaacgcagtt
     5341 tccgcaatgc accgcgcaca ttggatttgg acattatcga ctttgacggc atctccagcg
     5401 acgacccccg ccttaccctg ccgcatccgc gcgcgcacga acgcagtttc gtcatacgcc
     5461 ctttggcaga aatcctccct gattttattt tgggaaaata cggaaaggtt gtcgaattgt
     5521 caaaacggct gggcaatcaa ggcatccgtc ttttaccgga caggtaattc cgcacgcgga
     5581 tgccgtccga acaccggttt cagacggcat ttttcctttg ccgccaacac gcgtgcaaaa
     5641 aaaatcgccc cttgagaaag gggcgcaaaa ggaacacaaa ccactaccaa aactttaaat
     5701 ctgcaacact gcctgccgca tactgtaccc gacaggatat aaggccctca ctaaatcgtt
     5761 tcgagaaatc caaacttctt catcaccgac agaaaatctg cctttctccg gcaccagctc
     5821 caacaaaaac ggctgaaccg ccgtatgcag cttgtcctta caccgcccca gctttctgga
     5881 caacgcggac agggcgcgtt tgtaggcatt atccttgcgg tcgagctccc tcgcactacc
     5941 gacccagctc aaacgaaggt tgcggctttc atcttcaatc agcaaaatac ctgtttcaac
     6001 ttcccccacc tcgggttcgc acgaaagcgc aatataatat ttgccgtcaa tattgacata
     6061 tgccgcttca tgcacctgac agttgcaacc cgaggttgcg agcagggaat aaacagaatc
     6121 acggtgcagc ctcaaaatat cggaggaaat ctgtttgaaa atactttccg gcatttttcc
     6181 ctcctttcgt ctgctgcgtt gtttactgga ttgactgcat tatacagaca tctcccaatt
     6241 ttacaaatga taattgttcc tattttttaa aaagtttata aattattgat aaatatatga
     6301 attaattttt aagatttaaa acctttgtct caaaaaatac aaaaatgccg tctgaaacgt
     6361 gttcagacgg cattggcttc acaggcagtc cgtttaaaat ttcacgccct tatgcagcgc
     6421 gacgatgccc gcactcatat tgtgataatc cacgctgtcg aagcctgcat ccagcatcat
     6481 ctgtttcaaa gtttcctgat cggggtgcat acggatggat tcggcgagat actggtagct
     6541 gtccgcatct ttggcaatca gcctgcccat caccggcaac agcttgaaag aataaaaatc
     6601 gtatgcgcct tcgagcggct tgtagatttt ggaaaactcc aacaccagca acgtaccgcc
     6661 cggtttcaaa acacggtaca tttccttaag cgcggcatct ttatacgtca tgttccgcaa
     6721 gccgaacgcc acggagacca agttgaaata attgtcgggg aaaggcagtt tttccgcatc
     6781 ggcaagcgac acgggtaaaa tcatgccttc gttcaacaga cggtcgcgcc cgacggtcag
     6841 catagaagaa ttaatatcgg tcagccaaac ctcgccttcc ttgccgaccc gtttcgccca
     6901 accgcgcgac aaatcgcccg taccgcccgc aatgtccaac actttatcgc cttttttcag
     6961 gtgcgccgta tggatggtaa aatgcttcca tacgcggtgc agccctgccg acatcacatc
     7021 attcataatg tcgtagtttt tggcgacgga gtgaaacact tccgccactt ttccggcttt
     7081 ctcatcttcg ttgaccgtgc tgaacccgaa atgcgttttt tgtccgccca tattctaacc
     7141 acctccctga taccgcccta cggcatccca aacttaacaa tctgattgct tttcaaaacg
     7201 cgacgcgccc gccgccgcca atttgtccaa atattcctgc cacatcgcat cgtatccgta
     7261 tgccagtctg tgcagatacg cccaatcgta aagaccgctg tcgtgcccgt ccgaaaaact
     7321 gattttcagc gcatactgtc cgacaggctg caaatccgta atctgcacat ccgccttacc
     7381 ggtctgcaaa acatcctgtc ccacgccgtg tccgcgcact tccgcactcg gcgaatagac
     7441 gcgtaaaaat tcggcaggca gatttttagg ttcgtcccca taagtcaaaa ccaacacggc
     7501 acggtttttc aacaaacgga tttcaacagg aatattattc aaaaaacacc tcggttcggc
     7561 atacaatatc cggcaggcgt acgcgtgcct ttaaacggcg cgtattttaa cagctttatc
     7621 ccgataccga tattcaaacc cacacttcag acggcattga tatggacaat ctcgtatggg
     7681 acggcattcc cgacatccgc acactcgacc aaaccatccg caaacacgca cacccgctca
     7741 acctgattgt ctgcctcccc gataatcaga ttcccgattt tcaaaccgca caagatgctt
     7801 cggactcgga atgccgtctg aagcaccgtt tggatcaggc aacccagtgc ctccagttcg
     7861 acagcatcaa cctcatcgaa cacatcctgc ccgatgtccg cttctggctg gttccccctt
     7921 cacgcacccg ccgcctgcac gaacacttcc accacatttc ctggcagacc gaagccatcc
     7981 cgcaaaccga aagcaagtcc gacaaaccct ggtttgcact tccacaaaca tccgaacgga
     8041 aaaaaccgga acacgtcctc gtcatcggtg caggcattgc cggcgcatcg accgcccacg
     8101 ccttagcatc acacggcatt tccgttaccg tattggaagc ccgaaaagcc gctcaagccg
     8161 ccagcggcaa ccggcaaggg ctgctttacg ccaaaatctc gccgcacgac accggacaga
     8221 ccgaactgct gcttgccggc tacggctaca ccaaacgcct gctcggacac atcctgcccg
     8281 actccgacac ttggggcggc aacggcatca tccacctcaa ttacagccgc accgaacaac
     8341 aacgcaatca cgaattgggt ttgcaaaaac accataacca cctctaccgc agcatcacgt
     8401 ctgcagaagc cgaaaaaatc gccggcatcc cgctgaacac gccctacgcc gaaccattat
     8461 gcggactcta ctggcaacac ggcgtatggc tcaatccgcc cgcattcgtc cgcaccctcc
     8521 tcagccatcc gctgatcgaa ctatatgaaa acacaacgtt aaccggcatt tcccacgacg
     8581 gagaaaagtg gattgcaagc acgccaaacg gcacatttac cgccacacac atcatctact
     8641 gcaccggcgc gcacagcccc tgcctgcccg aaaccaacct cgccgcccta cccctcaggc
     8701 aaatacgcgg acaaaccggc ctcacaccgt ccaccccgtt ttccgaacaa ctgcgttgcg
     8761 ccgtttcagg cgaaagctac atcagcccgt cgtggcacgg actgcactgc tacggcgcga
     8821 gttttattcc caacagcagc aataccggat ggaacgaagc cgaagaagcc tcaaaccgcc
     8881 aagcattggc acaccttaac cccgcccttg ccgaatcatt gtttgccgcc aacccaaacc
     8941 cccaaaaaca ccaagggcac gccgccatac gctgcgacag ccccgaccac ctccccgtcg
     9001 tcggcgcact cggcgacatt gccgccatgc ggcagactta cgccaaactt gcactggaca
     9061 aaaactaccg catcgacacc acatgcccat atctgcccaa tgcctacacc aataccgccc
     9121 acggcacacg cgggcttgcc accgccccca tctgcgccgc cgccgttgcc gccgaaatcc
     9181 taggcttgcc ccatctcttt tcacaacgcc tgcgccacgc cctacacccc aaccgcaccg
     9241 tcatccgcgc catcgtcaga aggcagaacc tgattcctta agcctttgcc gcatgccgtc
     9301 ccgaccacaa aaaatcatat tcaaataaac ataccaatcc tgacggtaaa atatcgaaaa
     9361 cacccataac gttttcttcc caaaataagg agtaaggaat gcctaacaaa ttgcctttgc
     9421 tgtccaagat gaattttccg taacattcga agacttcctt aaccctgcca gccgcttcgg
     9481 tttctgtacc ccctgttaga taaggaaggg atgaaaaagc cctgttactt gtatgaagca
     9541 aagggcgtta atttttgtta atcttccctt ctcaggaact caatatataa ggatgttaat
     9601 ttttatttcc cttctcgagg actcaatag
//
LOCUS       DAXGCP010000082         9320 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.082, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000082 DAXGCP010000000
VERSION     DAXGCP010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9320
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.082"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(240..752)
                     /locus_tag="ACFJCW_001741"
     CDS             complement(240..752)
                     /locus_tag="ACFJCW_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151823.1"
                     /translation="MKSKLPLILINLSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPAPSPSNGGQAVKYKAPVKTVSKPAKSNTPPQQA
                     PVNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQKINALQSNVLDRQQNI
                     QALQRELGRM"
     gene            complement(843..1238)
                     /locus_tag="ACFJCW_001742"
     CDS             complement(843..1238)
                     /locus_tag="ACFJCW_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HFC4151824.1"
                     /translation="MPSDKEARAGCLSLPANNGIIRTLPPPFYFTGINIRLFAALGLL
                     SLSGAAAQASIYHCNSNGKSVYTSDPSGSCADADLPKISSHQGGGYRLKIKKLSQEAK
                     IHTGNKKKNKKHAGKKNRQAAKAPKENQK"
     gene            complement(1225..3147)
                     /locus_tag="ACFJCW_001743"
     CDS             complement(1225..3147)
                     /locus_tag="ACFJCW_001743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HFC4151825.1"
                     /translation="MIEIKNLTLQRGLKVLLDKASAAVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDISIPKNWRLASVSQETPDLDISALDYVLQGDAELQAFQTALRQAE
                     VQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYSGNYDFYQTERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPDHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVHSEKLNIGYFAQHQLDTIRADQ
                     SPVWHIQQLSPEVREQEIRNFLGGFDFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIVVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAATAPAASTQSQNRKDTKRIEAQIRQEKARRSKPIQQKIDKA
                     EKEMVQLSEIQTGCEAFLTQEDAYLEANKEKLQNTLSELAKVKTQLAQIEETWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(3224..3595)
                     /locus_tag="ACFJCW_001744"
     CDS             complement(3224..3595)
                     /locus_tag="ACFJCW_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HFC4151826.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLPQ
                     CRTLSDLTPENLLSDIKPVDYPEILIIGTGAAQEFIHPKIMADFSRIGISVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            3791..5098
                     /locus_tag="ACFJCW_001745"
     CDS             3791..5098
                     /locus_tag="ACFJCW_001745"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HFC4151827.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREIRISAMCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKEAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEKQNVIVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     DGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            5091..5525
                     /locus_tag="ACFJCW_001746"
     CDS             5091..5525
                     /locus_tag="ACFJCW_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151828.1"
                     /translation="MTEPKHETPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCMKNIPFAEKWQNDLKARGLDADNTRLAVDYCKCMWEQPLD
                     GLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKAD"
     gene            complement(5702..5971)
                     /locus_tag="ACFJCW_001747"
     CDS             complement(5702..5971)
                     /locus_tag="ACFJCW_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HFC4151829.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTNALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTLKFRAGKALKDAL"
     gene            complement(6153..8615)
                     /gene="lon"
                     /locus_tag="ACFJCW_001748"
     CDS             complement(6153..8615)
                     /gene="lon"
                     /locus_tag="ACFJCW_001748"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HFC4151830.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAAVEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAKLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMTKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLGLPWKKKSRVSKDIAKAGLVLDADHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVRNPLFLLDEIDKLGSDFRGDPASALLEVLDHE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELVVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLNE
                     DKKRLSETKKTSKAKPRAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGMIQCTGQLGDVMKESVSAAWSVVRSRAESVGLAPDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFTKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNVKDLEEIPENVKTGLTIHPVKWIDEVLALGLESRPESWAEP
                     SAAEAAAESASKPKPRSRAIKH"
     gene            8867..>9320
                     /locus_tag="ACFJCW_001749"
     CDS             8867..>9320
                     /locus_tag="ACFJCW_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HFC4151831.1"
                     /translation="MSSFIFPDNGFEWRNESLQKPPKGWYYVRESGADGILKATYQNI
                     ATVWQGDFHNAKQVLSAMKKKVRKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGVHEWHK"
BASE COUNT         2086 a         2356 c         2408 g         2470 t
ORIGIN      
        1 tatacattat gcgaactatc ggaaacagtt gtacgtgtag ccggtattgg ggaatacgtt
       61 gaccttcaat acgattacag gcagccgaca cacaggatat gccgcccata cttttttaat
      121 ccaaaacatt atatcaacgg gcgcaaacag taaatcgccc aacttatccc aaaaattctc
      181 ctgctttttc atcatttctt ctgtcaaatc cttggaacgg tcgatttgaa aacacggcct
      241 tacatacgtc ccaattctct ttgcagtgct tggatatttt gctgtctgtc caaaacattg
      301 ctttgcaatg cgttgatttt ttgatggttg atgttgccgc cttttgccag acgtgcttgt
      361 gataacattt tttgggcttc agtcagggct ttgcgttcat tgcttaattc tgcttcgaga
      421 atggagcgtc tgctgttatt tacaggtgct tgttgaggcg gcgtattgga ttttgccggc
      481 ttggatactg ttttgaccgg ggctttatat ttgacagcct gtccgccgtt tgacggtgat
      541 ggtgccggtt cgggagtttg gggcgggata tagcgttcgc tgctgtagtt gccgattggg
      601 ggcaaatcgg ttgagtggca gcttttagac ggcttggtgg tgtaaacggt ttctccgttg
      661 attgtgcagg tatagatttt ggccgcattc gcacccaatg ggcttgaaat cagggaaagg
      721 ttgattagga ttaagggtag ttttgatttc ataatgtgtt tgatattcgg ataataattt
      781 gattttttga ggattttttg taaggttttc ttggcgtttt atgggctttt cttttcggtt
      841 gtttattttt gattttcctt cggggctttg gcagcctgtc tgttcttttt cccggcatgt
      901 tttttgtttt tctttttgtt tcctgtgtgt attttggctt cttgactaag ttttttaatt
      961 ttcaggcggt atccgcctcc ctgatggctg ctgattttag gtaaatcagc atcggcacac
     1021 gatcctgacg ggtctgatgt atatacgctt ttgccatttg agttgcaatg gtatatggag
     1081 gcttgcgccg ccgcgccgga aagggacagg agacccaagg cggcaaaaag tctgatgttt
     1141 ataccggtaa agtaaaaagg cggtggtaac gtccgaatta taccgttatt ggcaggcaaa
     1201 gataagcacc ctgcccgcgc ttctttatcg ctcggcaaac tgtttctcga tttcagtttc
     1261 aatccgttcc aattcttctt gacaagccag ccaagtttct tcgatttggg caagctgtgt
     1321 tttgactttt gccagctcgg ataaggtatt ttgcaatttt tctttgtttg cttcaaggta
     1381 agcgtcttct tgtgttaaaa atgcttcgca tcccgtctga atttcagaaa gctgcaccat
     1441 ttctttttcg gctttgtcga ttttctgttg tatcggctta ctgcgtcggg ctttttcttg
     1501 acggatttgc gcttcgatac gcttggtatc cttgcggttt tggctttgag tggaagcggc
     1561 tggcgcggtt gcggcgtttt cctgtgccaa gcgccattgg cggtaatcgt tcaaatcgcc
     1621 gtcaaagttt ttcagacgac ctttgtctat caagaggaaa ctgtcggtcg tggcttcaag
     1681 caggctgcgg tcgtgcgata cgacgattaa tgcaccttgg aaactttgca acgcgagcgt
     1741 taaggcatga cgcatatcca aatccagatg gttggtcggt tcgtcaagca gcagcaggtt
     1801 cggcttttgc cagataatca tggcaagggc aaggcgggct ttttctccgc cggaaaaagg
     1861 ttcggttttc tgtaacgcca tatcgccgac aaaatcgaag ccgccgagga aatttcggat
     1921 ttcttgttcg cgtacttcgg gagaaagctg ctgtatatgc caaacagggc tttggtcggc
     1981 gcggatggtg tcaagctggt gttgggcgaa atagccgata ttaagttttt cggaatggac
     2041 gatgctgccg gagagtaaat cgatttttcc tgccaaagct ttgataaacg tagatttacc
     2101 gctgccgttg acacccaata gcccgtagcg tgcgccgctt tccagcgaca gggtaatgtc
     2161 atgcaggacg gttttacctt cgtaacccaa atcagcgtgc tccagcttca gcaaaggatt
     2221 gggcagatgg tcgggattgt aaaactcaaa ggaaaactcg ctgtccagat gtgcgggagc
     2281 gatgcgttcg agcttcgcca acgccttcat gcggctttga gcttgaacgg ctttagtggc
     2341 tttggctttg aagcggtcga taaaggattg cagatgtttg atttgcgcct gctgtttgac
     2401 atatgcggct tgttgttgcg ccagacgctg cgcgcgttcg gtttggtaaa aatcgtaatt
     2461 gccgctgtat tgcgtgagct tttgctgcga caattcaatg gtttgggtgg tggccgcatt
     2521 gaggaaatca cggtcgtggg aaatgatgat ttgcgtgcag ggtaaagagg caaggtggtt
     2581 ttccaaccac aagacagttt ccaaatccaa atggttggtc ggttcgtcaa gcaagagcaa
     2641 atcagcgcgg caaatcaggg cttgcgcaag attcaggcgc atacgccagc cgccggaaaa
     2701 ggatttgacg ggacggctgt gttcttcttg cgaaaaaccc agcccgttca acaattttgc
     2761 cgcgcgggcc ggcgcggtat aggcgtcgat ttcttccaat ttggcatgat attccgcctg
     2821 cttcatgccg tcattttgca cttccgcctg cctcaatgcc gtctgaaaag cctgcaactc
     2881 ggcatcgccc tgcaaaacgt aatccaaagc ggaaatatcc aaatcgggcg tttcttggga
     2941 aacggaagcg agccgccagt ttttcggaat cgagatatcg ccgccgtcct gagtgatttc
     3001 gcccttgatt aaggcaaaca ggctggattt gcccgtcccg ttcttaccga tcaaaccgac
     3061 gcgctgaccg ggattgacgg cagcggaagc cttgtcgagc aggactttca aaccgcgttg
     3121 cagggtgagg tttttgattt caatcataac ggaaacatcg tcgggcggga aaagcccgta
     3181 ttttacctga aagtcagtgc cgatgccgtc tgaaacggga aatttacggc tgaagccaag
     3241 cccaagccct gcgcccttcc gagtgcagga aaaccaatgt cctgaatgcc gaatcggtat
     3301 tcatgcattc cacgctgatt ccgattcggg aaaaatccgc catgattttg ggatggataa
     3361 actcctgagc cgcgcccgtc ccgataatca atatttccgg atagtcaaca ggtttgatgt
     3421 cggacaacag gttttccgga gtcaggtcgg acaaggttcg gcattgcggc aggcagaccg
     3481 aatccttatg tacaagcacg ggtttatgga aactttgccc cgccagccgg attccgcccg
     3541 cgccgcattc atattctgca aactgtccgt ctatcggatt ttcttcaaac aacatttttt
     3601 accccgttgc tgcatcatct gcaccgaaag gggtgcaaaa tcaggcgaat taatgtagga
     3661 ttggcagatt tcatctgacg cgcctgccga tttcagacgg catttgattc aaagtgcggc
     3721 acaattatat cggcagcgga tattttcgtc tttcaatatt tacatttcag tcggcttaca
     3781 aggagacaca atgaagccag taaacatcgg tcttttaggc ttaggtacgg tcggcggcgg
     3841 tacggctgcc gtgttgcggg acaacgcaga ggaaatttcc cgccgcttgg ggcgcgaaat
     3901 ccgtatttct gccatgtgcg acttaagcga agaaaaagcc cgccaaatct gcccgtccgc
     3961 cgcctttgtc aaagatccgt tcgaactggt cgcgcgtaaa gacgtcgatg tcgtcgtcga
     4021 attgttcggc ggcacgggca ttgccaaaga agcggtgttg aaagccattg aaaacggcaa
     4081 acacatcgtt accgccaaca aaaaactgct cgccgaatac ggcaacgaaa tcttcccgct
     4141 ggcggaaaaa caaaacgtca tcgtccaatt tgaagcggca gtagcgggcg gtatcccaat
     4201 catcaaagcc ctgcgcgaag gtttggcggc aaacaggatt aaatccatcg ccggcattat
     4261 taacggcacc agcaacttca tcctctccga aatgcgcgaa aaaggcagcg cgtttgccga
     4321 cgtattgaaa gaagcgcagg cattgggtta tgccgaagcc gacccgacct tcgacatcga
     4381 aggcaacgac gcaggccata aaatcaccat catgagcgcg ctggcattcg gtacgccgat
     4441 gaacttctcc gcctgctatc tcgaaggcat cagcaaactc gacagccgcg acatcaaata
     4501 cgccgaagaa ctcggctacc gcatcaaact gttgggcatc acccgcaaaa ccggcaaagg
     4561 catcgaattg cgcgtccatc cgaccctgat tcccgaaagc cgcctcttgg caaacgtcga
     4621 cggcgtgatg aacgccgtgc gcgtcaacgc cgatatggtc ggcgaaacct tatattacgg
     4681 cgcgggcgcg ggcgcattgc cgaccgcttc cgccgtggtt gccgatatca tcgacatcgc
     4741 ccgcctggtt gaagccgaca ccgcccaccg cgtaccgcat ctggcgttcc aacccgccca
     4801 agtccaagcg caaaccatcc tgcctatgga cgaaattacc agcagctact acctgcgcgt
     4861 ccaagccaaa gacgaaccgg gcacgctggg gcaaatcgcc gcgctgttgg cacaagaaaa
     4921 cgtgtccatc gaagccttaa tccaaaaagg cgttatcgat cagaccactg ccgaaatcgt
     4981 gattctgacc cacagcacgg tcgaaaaaca catcaagtcg gcaatcgcag ccatcgaagc
     5041 actggattgt gtggaaaaac cgattaccat gatccgcatg gaaagcctgc atgactgagc
     5101 cgaaacacga aacgccgacg gaagagcagg ttgccgcgcg caaaaaagca aaagccaaaa
     5161 tccgcaccat ccgcatttgg gcgtgggtca ttttggcgtt gctcgcttca accgccctgc
     5221 tctcccaatg cgcgatgtcc aaaccgcagg caaaacagaa aattgtcgag tcttgcatga
     5281 aaaatattcc gtttgctgaa aaatggcaga acgatttgaa agcgcgcggc ttggatgcgg
     5341 acaatacccg tctcgccgtc gactactgca aatgtatgtg ggagcagcct ttggacggat
     5401 tgagcgagaa acagatcagc tccttcggca aactcggtgc acaagaacag cttgacctgc
     5461 tcggcggcgc aaacgcgttt gaaactcgag acaaacaatg tgtcgcggat ttgaaagccg
     5521 attgaacctc aggtctggaa tgccgtctga acgcggggaa aagcgtttca gatggcattt
     5581 ttccatccgg gtttgacggg cagcccttca tccgaatccg acgggcaaac ccctatcctg
     5641 attcggcggg gaaaacaaaa aagccgattc ttcaaggaat cggcttttgc tgaaaaacag
     5701 tttacagtgc gtctttcaat gctttacctg cacggaattt aagcgttttg gcggcggcaa
     5761 tggtcagagg ctcgccggtt ttggggttgc ggccttggcg ttccgcacgt tcgccgacgt
     5821 agaaagtacc gaaaccgacc agagtaacgg tgtcgccttg tttcagggcg ttggttactg
     5881 cgttggtagt ggcatccaaa gctttttgtg cggcggcttt ggaaatatcg gcttcttgag
     5941 caatcgcttc gatcaattca gacttgttca caatcagtcc cttcctgtct taaaaaatga
     6001 tgaaatgccc gaatactcgg ggtttgtact gcttgagcaa ctttcgcttt atagcaattc
     6061 tgaaattgcc gtgtcaagca aaaaatacgg aatcgcccta ttttacaggc tttcaggacg
     6121 aaaccgcatt tttacaacac atttcctgcg tttcaatgtt tgattgccct gctgcggggt
     6181 ttcggttttg aagcggattc cgccgccgct tccgcggcag aaggttctgc ccaagactca
     6241 ggccggcttt ccaaacccaa agccaatacc tcgtctatcc atttgaccgg atggatggtt
     6301 aatccggttt tcacgttttc agggatttct tccaggtctt tgacattgtc tttcggaatc
     6361 aggacgtgtt tgatgccgcc gcgaagcgca gccaacagtt tttccttcag accgccgatc
     6421 ggcaggactt cgccgcgcag ggtaatttcg cccgtcatgg caacatcggc acgcaccgga
     6481 attttggtaa aggcggacac catcgccaaa gtcatagcaa tgcctgcgct cggaccgtct
     6541 ttcggcgttg caccttcggg aacatggaca tgaatgtctt ttttctcgta aaaatcagga
     6601 gccaaaccta ctgattccgc acgggaacgg acaacagacc atgcagcgga tacagattcc
     6661 ttcatcacat cgcccaactg gccggtacac tggatcatgc ctttacccgg taatgctgcg
     6721 gcttcgacag tcagcaattc gccgccgact tccgtccaag ccaaaccggt aacctgtccg
     6781 atgcggtttt cactttcggc aacgccgtaa tcgaagcggc gcacgcccaa gtagtcatgt
     6841 aggtttttct cattgacttt aaccgcccta ggcttggctt tgctggtttt cttggtttca
     6901 gacaacctct tcttatcttc gttcaaggta atctgcatca ccaccttacg gcagattttg
     6961 gcaatttcgc ggtcgagcga acgcacgccc gcctctcggg tgtaataacg gataatatcg
     7021 cgtaccgcgc tttcttcgac caccaattcg ccttctttca cgccgttgcg tttcatttgc
     7081 ttcggtacga gatactgcat cgcgatattg attttctcgt cttcggtata gccggacaga
     7141 cggatgattt ccatacggtc aagcagcggg gtcgggatat tcaggctgtt tgaagtcgca
     7201 ataaacatca cgtcgctcaa atcgtaatcc acttcggcat aatgatcggc gaacttgttg
     7261 ttttgttcgt gatcgagcac ttcaagcaac gcgctggcgg gatcgccccg aaagtcgctg
     7321 cccaatttgt cgatttcgtc gagcaggaac aacgggtttc ttacgcctgc ttttgccata
     7381 ttctgcaaaa tcttgccggg catagagccg atataggtac ggcggtgccc gcggatttcg
     7441 ctttcgtcgc gcacgccgcc caaggccata cggacatatt tccgccccgt tgctttggcg
     7501 atggattcgc ccaaagaggt tttgcccacg cccggagggc cgaccaaaca cagaatcgga
     7561 cctttgagct tgtccatacg tttttggacg gcgaggtatt ccaaaatccg ttctttgact
     7621 ttttccaggc cgtagtggtc ggcatccagc accagtccgg ctttggcgat gtctttgctg
     7681 acgcgggatt ttttcttcca cggcagtccg agcagggtgt cgatgtagtt gcgtacgacg
     7741 gtggattcgg cagacatcgg cggcatcatt ttgagttttt tcagttcgga caggcatttt
     7801 tcttccgctt ctttggtcat acccgccttt ttgatgcctg cctccaaggc atccagttcg
     7861 ccgttttcgt cttcttcgcc caattctttg tgtatcgctt taatctgttc gttcagataa
     7921 tattcgcgtt gggatttttc catttggcgt ttgacgcgtc cgcgtatgcg tttttcggcc
     7981 tgcataatgt cgagttcgga ttccagcttt gccagcagga attccatccg tttgccgatt
     8041 tcgggaatct ccaaaatctg ttggcgttgc gccagtttca actgcaaatg cgctgcgacc
     8101 gtatcggtta gccggctgtt ttcggcaatg ccgttgatgc tgccgataat ttcggcaggg
     8161 atttttttat tgagtttggc gtattgttca aactgcgcca acagggtgcg gcgcacggct
     8221 tcgaggtcgg tattgccgcc cgtgtcttct tccacgaccg cctctatatg agaaacgaac
     8281 agcccgcccg tgtcttcgat ggtcaaaaca cgtccgcgat acagcccttc gaccagcact
     8341 tttaccgtgc cgtcgggcag tttcaacact tgcaggactt gtgcgacggt accggtctga
     8401 tacaggtcgg cggcaaccgg ttcttctacc gccgcatcgg tttgcgccaa caggaaaacc
     8461 ggttcctcgc gggtaatggc gttttccagt gcggcgatgg atttcggcct gccgacgaac
     8521 agcggcagaa ccatatgcgg gtaaacgacg acatcccgta aaggaagggt cgccaaagca
     8581 gcatattcct caaaatgctt ttctttttgt gtcatggata ctctcttgtg tctgacagga
     8641 tacggattgc cgcgtaaatt ggggttgaaa gtattatttc aagcatacgc ggtttattta
     8701 tggagtttga tgccatgccg tctgaaacat tccggcttca gacggcatgg gcttggaaag
     8761 acaaggcggg aacaaaaaaa cagttctgtg ttgccgctcc ttgctgtacc atccgtatgg
     8821 tttgcggttc tgccgcccta ttttcaaaac atgacgcagg tatcccatgt cttcttttat
     8881 ttttcccgat aacgggttcg aatggcgcaa cgaaagtctg caaaagccgc ccaaaggttg
     8941 gtattatgtc cgcgaaagcg gtgcagacgg cattttgaag gctacctatc aaaatattgc
     9001 aactgtctgg cagggcgatt tccacaatgc caaacaggtg ctttcggcaa tgaagaagaa
     9061 ggtccgcaaa cctgccgccg tccgttccga tgcagatatc gccgcccttt tccacgccca
     9121 ccgtatgaag caggcgcaac agagccgtat tctgaatatg cttgccgttg aaatccgccc
     9181 cggtttcgtg ttggacaaca aacgcgcgcc cgatatacgc gccgctttgc tcgacgtgta
     9241 cggagaggcg gacggcaaac cgttttttct gccgctcaat ctgctgctgg ggtttatggg
     9301 tgtgcatgag tggcataaga
//
LOCUS       DAXGCP010000083         9309 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.083, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000083 DAXGCP010000000
VERSION     DAXGCP010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9309
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.083"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..153
                     /locus_tag="ACFJCW_001750"
     CDS             <1..153
                     /locus_tag="ACFJCW_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HFC4151832.1"
                     /translation="LEHKVLPPAPYSPEPNPIEKVWANIKRYLRTVLSDYARFDDALL
                     SYFDFN"
     gene            complement(261..3113)
                     /gene="gcvP"
                     /locus_tag="ACFJCW_001751"
     CDS             complement(261..3113)
                     /gene="gcvP"
                     /locus_tag="ACFJCW_001751"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HFC4151833.1"
                     /translation="MKLSELFNPNEFAARHLSFGDEAALLAAVGEKSMDEFVGNTLPQ
                     SIRMPSELDLPEALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVILRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVSDFAQADEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPKGVKRIANRIHTLASVFADALVSDGLKVVHEVFFDTVTVDFGSK
                     EKADQVFAAALESGYNLRSVNNTQVAAAFHETSVYEDLADLYRAFTGKDTFTFADDVK
                     GRLNAELLRQDDILQHPVYNSYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWTEFSDIHPYAPEAQTAGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAHRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHTLTDTHSASAGQT
                     SVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRIAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKSIRREVQKVIDGEWPKDDNPLVNAPHTAADITGEWAHPYSREEAVFPL
                     PFVREHKFWPFVNRVDDVYGDRNLVCSCPPMENYED"
     gene            complement(3144..3503)
                     /locus_tag="ACFJCW_001752"
     CDS             complement(3144..3503)
                     /locus_tag="ACFJCW_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151834.1"
                     /translation="MTDRPNLLRIKPGQAEIMEYCEPEEASDPYATYRRANLMAGLPL
                     FVVILVLLNVVFPLPAHPLAWLVPAGFMVLGGGFPLSLPLVALLVPTCCILARCPPLS
                     RLLCHPCPNHPMSKNSA"
     gene            3502..3681
                     /locus_tag="ACFJCW_001753"
     CDS             3502..3681
                     /locus_tag="ACFJCW_001753"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HFC4151835.1"
                     /translation="MPSEPAGRLSQKTPYRCNFMRLYGVGFALQTAYASRSSLVSQSV
                     HDYINNLGADKPLFI"
     gene            complement(3674..4315)
                     /locus_tag="ACFJCW_001754"
     CDS             complement(3674..4315)
                     /locus_tag="ACFJCW_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HFC4151836.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPEEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLSDHPLYE
                     DLSEEYGIPLFGGTWAEILGNNNLKSDQIHANGKGYRKFAENLNQFLRKHGFR"
     gene            complement(4305..4856)
                     /locus_tag="ACFJCW_001755"
     CDS             complement(4305..4856)
                     /locus_tag="ACFJCW_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HFC4151837.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIKDDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDIDTVAAFGEADIERLLTDAGIVRNRLKIDAAIF
                     NARQIQALQQEHGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRKTLKYHPKWLDAV"
     gene            complement(4860..5378)
                     /locus_tag="ACFJCW_001756"
     CDS             complement(4860..5378)
                     /locus_tag="ACFJCW_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HFC4151838.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPAS
                     RSGSTDKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(5378..7039)
                     /gene="pqiB"
                     /locus_tag="ACFJCW_001757"
     CDS             complement(5378..7039)
                     /gene="pqiB"
                     /locus_tag="ACFJCW_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HFC4151839.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSGEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEIANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFNNLPLDKTVAELN
                     GSLAELKSALKSANASLSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNNSSKDPIPKGSR"
     gene            complement(7032..8366)
                     /locus_tag="ACFJCW_001758"
     CDS             complement(7032..8366)
                     /locus_tag="ACFJCW_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="paraquat-inducible protein A"
                     /protein_id="HFC4151840.1"
                     /translation="MPPFIFATFPMKPFAENIPHSLRGNCRDEALPPHTVDCPECGCR
                     TDVPQLDKGEAAFCPRCGHKLFRVGSHPFSGPPAYAAASLILMAFAYSMTYIEVGIPG
                     AASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALR
                     LATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAKVRFGPAFYLMFALSVMLIRTSVSV
                     PQHWVYFQIGRLTGNNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLS
                     ISSAFLTAAVVLYFPANILPIMISSNPAATEANTIFSGIAYMWDEGDRLIAAVIFSAS
                     ILVPVLKIAAMSVLIAAARFALPAGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFH
                     TYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD"
     gene            8677..9306
                     /locus_tag="ACFJCW_001759"
     CDS             8677..9306
                     /locus_tag="ACFJCW_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HFC4151841.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDPELNKAISELEYMARYDAVTQDLKDLGEEPYKFDKELPHE
                     TGNKAVGWLYCAEGSNLGAAFLFKHAQKLDYTGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAQEAFAFYKVILRETFGLPEGTEAPEGMMPHRH"
BASE COUNT         2081 a         2402 c         2642 g         2184 t
ORIGIN      
        1 ttggaacata aggtattgcc tcccgcacct tattcgcccg agcccaaccc gattgagaaa
       61 gtgtgggcga atattaagcg gtatctgcga accgttttgt ctgattacgc ccgatttgac
      121 gatgcactac tgtcctattt tgattttaat tgactataaa gttatagtcg agatacgtgt
      181 atcggtgcaa ccggtctgcc gttgacgaaa atgccgtctg aaagtgtttc agacggcatt
      241 tgtcttcggg gtttcaacag tcagtcttca taattttcca tcggcgggca gctgcacacg
      301 aggttgcggt cgccgtacac gtcgtccacg cggttgacga agggccagaa cttgtgttcg
      361 cgcacgaagg gcagcgggaa gacggcttct tcgcgagagt acggatgcgc ccattcgccg
      421 gttatatctg cggcggtgtg cggcgcgttg accagtgggt tgtcgtcttt cggccattcg
      481 ccgtcgatga ctttctgcac ttcgcggcga atggatttca gggcggcgat gaagcggtcg
      541 agttcggctt tgctttcgct ctcggtcggt tcgatcatca gcgtgccggc aacagggaag
      601 gaaaccgtcg gcgcgtggaa gccgtagtcc atcaggcgtt tggcgatgtc ggtttcggtg
      661 atgccgcttt cggctttgag cggacgcaaa tcgacgatgc attcgtgcgc gatgcggccg
      721 tttttgcctg tatacagaat cggatagtct tcgctcaagc gtttagcgac atagttggcg
      781 ttgagcaatg cccagcgtgt tgcctgttcc atgccttgtt tgcccatcat ggtcaggtac
      841 atccaagtaa tcggcaggat ggatgcagaa ccgaaggctg cggcggcaac ggaggtttgc
      901 ccggcacttg cgctgtgggt gtcggtcagg gtatgccccg gtgcgaacgg ggcgaggtgg
      961 gctttcaagc caatcggacc catgcccggg ccgccgccgc cgtgagggat acagaaggtt
     1021 ttgtgcaggt tcatgtgcaa cacgtccgcg ccgacttcgg cgggctgcat gatgccgatt
     1081 tgggcattga ggtttgcgcc gtccatgtaa acctgtccgc cgttttcgtg aatgatccgg
     1141 cagatgtcgc ggatgccttc ttcgtacacg ccgtgtgtgg acggataggt aatcatgatg
     1201 gcggacaagg catcgcggtg ttgttcggct ttggctttca aatcgtcaat attgacgttg
     1261 ccgtgttcgt cggtatcgac gacgacgact ttcaaaccga gcatggcggc ggtggcgggg
     1321 ttggtgccgt gggcggattt gggaatcagg cagatgttgc ggtgtgcttc gccttgggct
     1381 tcctgataac ggcggatggc gagcataccg ctgtattcgc cttgtgcgcc ggagttgggc
     1441 tggaaggaaa tcgcgtcaaa gccggtgatg gctttcaggc tgttttccat atcagcaagc
     1501 aattcgcggt agccggcggt ttgcgcttcg ggagcgtaag ggtggatgtc ggagaactca
     1561 gtccaagtaa tcggcaacat ttccgcagtc gcattgagct tcatggtgca gctcccgagc
     1621 gaaatcatgc tgcggttcat agccaagtcg cggtcttcga gttttttcag gtagcgcaac
     1681 atttcgtgtt cggtgtggta actgttgtac acaggatgtt gcagaatgtc gtcttgacgc
     1741 agtaattcgg cattcagacg gcctttgaca tcatcggcaa atgtgaacgt atccttgccg
     1801 gtaaacgcgc ggtacaaatc ggccaaatct tcgtataccg acgtttcatg gaatgcagcc
     1861 gcaacttgag tattgttgac gctgcgcagg ttgtaacccg actccaaagc agcggcaaac
     1921 acttggtctg ctttctcttt gctgccgaaa tcgacggtaa cggtatcgaa gaagacttcg
     1981 tgaaccactt tgaggccgtc tgaaaccagc gcgtcggcaa agacggaagc cagtgtgtga
     2041 atgcggttgg cgatgcgttt cacgcctttg gggccgtgat aaacggcgta catgcccgcc
     2101 aagttcgcca gcaatgcctg tgcggtacaa atattggatg tcgctttttc gcggcggatg
     2161 tgttgttcgc gggtggacaa agccatgcgc aaggcaggtt tgcccgatgc gtctttggat
     2221 acgccgatga tgcggcccgg ggcggagcgt ttgaactcgt ctttaaacgc gaaataagcg
     2281 gcgtgcggac caccaaagcc catcggtacg ccgaaacgtt gggtgttgcc caaagcaata
     2341 tccgcgccca attcagccgg agacttcagc aaaaccaagc tcatgatgtc ggcggcaaca
     2401 gcaacgattg tgcctttggc tttcagacgg ccgataacgt cctgcaagtc ttgcacgtcg
     2461 ccatctttac cgacgtattg gaacagcgcg ccgaagtatt cgccttcatc cgcttgggca
     2521 aaatcgctga ccaccagctc gaagccgaaa tatttggcgc gggttttcat cacgtccaaa
     2581 gtttgcggat acacgcgcgc atccacaaag aaacgctcgg atttcacttt gcccacgcgg
     2641 tgcgccatcg ccatcgcttc ggcggcggcg gtcgcttcgt ccaacaaaga cgcgcccgcc
     2701 acagggaaac cggtcaaatc gatgcacacc tgctggaagt tcaacaacgc ttccaaacga
     2761 ccttgggcaa tctccgcctg atacggcgtg taggcggtgt accagcccgg gttttccaat
     2821 acgttgcgca aaatcacgtt cggcacgcgg gtcgggtaat aacccaagcc gatataggac
     2881 ttgttgatca cgtttttcga cgcgatgcct ttcaatttcg ccaatgcgtc cgcctcggtc
     2941 agggcttcgg gcaaatcgag ttcggacggc atacggatgc tttgcggcaa ggtgttgccg
     3001 acaaattcgt ccatgctctt ctcgccgaca gcggcaagca acgccgcttc gtcgccgaaa
     3061 ctcaaatgcc gcgcggcaaa ttcgttgggg ttgaacagtt cggacagttt catttctact
     3121 ccttcgggtt tgtagggctg ccatcaggca gaatttttag acatcggatg attcgggcaa
     3181 gggtggcaca aaagacggga taatggcgga caacgcgcca gaatgcagca ggtcgggaca
     3241 agcagcgcca caagcggcag cgataaggga aagccgccgc ccaaaaccat gaaacctgca
     3301 ggcaccagcc aagccaaggg atgagccgga agcggaaaaa caacattgag cagaaccaaa
     3361 atcacgacaa acagcggcag ccccgccatc aggttggcac gcctgtatgt tgcgtacggg
     3421 tcggatgctt cttcaggttc gcaatattcc atgatttcag cctgtccggg ctttatccgc
     3481 agcaggttcg gacggtcggt catgccgtct gaaccggcag gccgtctttc tcaaaaaacg
     3541 ccataccgct gcaacttcat gcggctgtat ggcgtaggtt ttgcacttca gacggcatat
     3601 gcgtcccgaa gcagtttggt gtcccagtcg gttcatgatt atataaacaa cttgggtgcg
     3661 gataaacctt tgtttatcta aacccatgtt ttctcaaaaa ttgattcaaa ttttcggcga
     3721 atttccgata gcctttgccg ttggcgtgga tttggtcgga tttcagatta ttattgccca
     3781 aaatttccgc ccacgtgccg ccgaacaacg gaatgccgta ttcctcggac aaatcctcat
     3841 acagcggatg gtcgctcaaa tgcccgaaca acgcgcccag tgtgatgtgc ggcacgccga
     3901 cgaggacggc gggaatgttt tccttttgca cggtttcgat gattttcgcg atattggcgc
     3961 gggtctgctc ctcgggaact ttgcgcagaa agtcgttgcc gcctatgccg acaatcacaa
     4021 gcttgggttt gcgtgccaac agcgcgggca ggcgcgatag ggcttgcgcg gacgtatcgc
     4081 ccgatacgcc gccgttgaca atattccaac ccgtcagttt ttgcagttgc gcggggtagg
     4141 attcgccggg gtttgctccg tagccgaagg tgagcgaatc gcccaaggca agcacggtgc
     4201 ttccttcggg aattttggcg tgggttcggg cggattttct gccgcaggcg gtaagaagca
     4261 acgcgcctgc gccgaggagg aaggttcttc tgttcattgg tttttcagac ggcatcgagc
     4321 catttcgggt ggtatttcag ggttttacgg taaaccggac agctttcggc gtgcgcgcct
     4381 ttgaggtagc cggtactcat cagaaattcg ccgacgattt cgccgccgac gaatttgaaa
     4441 tgttttttaa agagtttgac ccattcgtct ttgcttcgcg gatggtgcgc gtcgagccag
     4501 ttcttgaacg aaccgtgttc ttgttgcaac gcttggattt gccgtgcatt gaaaatggcg
     4561 gcatcgattt tcagacggtt gcggacaata cccgcatcgg taagcagccg ttcaatatcg
     4621 gcttcgccaa atgcggcgac cgtatcgatg tcgaaacctt caaatgccgt ctgaaacgcc
     4681 tgccgcttct tcagcatcag cgtccaactt aatcctgcct gattgatttc caacaccagc
     4741 cgttcaaaca gtccgttgtc gtccttaatc ggaaaaccgt attgcgtatc gtggtaatgt
     4801 ttgttcgggt tgtcggtgtt ttcgggaagt gaggcggcaa attcgcaata gttcacggtt
     4861 tactcgacca tctgttgcgc cgcctgtttc agtccctgtt cgagtgcggc ggtcatggcg
     4921 gcgtagccgt caccctgctg ttcggtttcg atatggaagg gtctgttcgt accgtcgggt
     4981 aggacggcgt agccgctgat gagggttttg cccgtgtagc tgccttggaa tgcgtcgata
     5041 tagaccgtcc atttgtcggt actgccgctg cgtgaggcag gaacaaaggt gcgtgtgctg
     5101 tccaaacggt tgaatgcatt gctcaacgcc gcttcgagca tatcgtccaa ggtgtctgcc
     5161 caaacatggt tttgtgcggt gttgatgcgg taggggtcgg tttgatagac cagtccgccg
     5221 cgtttgagcg gttcggcaag acggacttcg acggcggttt cgccgccttg cgttgcagga
     5281 cggatgtagc ggctgtcggg caacacgaaa tattgtgtgc tttgcacagt accgcaggcg
     5341 gcaagcgtca gggcggcggc gatggggaaa aggcgcatta tcggcttcct ttcgggatag
     5401 ggtctttgct gctgttgttg aaaatcagtg cgttgggttt ttctttcaaa gtgttaatga
     5461 cgggttgaac gtcttttaag gttttgtcca aactttgcag cgtattttgt acgtctccgt
     5521 agataggcga ttgaggcgat acgccttgca gggttatgcg caactctttc agagtttggt
     5581 tcagttcgtt cgggatgttt tgcgtctgcg gattgccgac cagtttgtca atggagctta
     5641 gggaggcatt ggcggatttg agtgcggact tgagttcggc gagcgagccg ttcaattcgg
     5701 caacggtttt atccaatggc agattgttga atttgtccag caaatccgcc aatttgacct
     5761 gcaagtcgtc caaaccgccg ccccgtgtgg cgatgacggt atcgcctgca taaacggtat
     5821 gcggtcgcag cttgggcgag gcggaaggct gatcgttcaa ctcaatcatt ttgccaccgg
     5881 tcagcaggtt gttgctggag atggtggcgg tcaggccttt gtttaaggcc gtctggaatt
     5941 gttgtttcca atgctctttg ctttgctcgt cggcattgat ttccaaacgg gaaggctcga
     6001 tgcggatgcg tacgggaatc cagccgtttt caaacaggtg caggctgtca ttgcggtcaa
     6061 aataagggac atcggaaacc atgccgacat tcagcccttt gtattcgaca ggcgaaccga
     6121 cggtcagtcc gcgcacggat tgtttgaaaa acgcggtgta gtacagcgag cggtcgtcag
     6181 gcaggttggc gatttcgctg cggctgtcgt aaagcgtgaa gctgtcctcg cttttgacgt
     6241 ttttactgtt tttggttttc ggcgaatcaa atgaaatcgc gcctgacagc agggcaggca
     6301 gaggggcgga attgagtttg atgccgctgc ctgtggtttc gatattgatg ccgctttcca
     6361 gccaaaaacg gctggcggaa tgaatcagtt tgtcgttggg gctttggatg aagatggtgt
     6421 aatgcacgct ttggtcggac gggtcgaaat gcgcgctttc gatttgcccg accataaagt
     6481 tttcatacaa aacagggctg ttgacgttga ggatgcggtc gtttttacca atcaaattca
     6541 agcgcagccc gctttgcccg atggcggtaa cgggcggaat gtcctgcact tggaacacgt
     6601 cttttgcctc gccgcttttg ccgggtgtaa aagcgatgta cgaacccgaa agcagcgtac
     6661 ccaaaccggt tacgccgctt tggtcgatac gcggcttgac cacccagaac tgggtatcgc
     6721 tgcggatgag gccggatacg tccgcattga gttgggcagt aacttccacg cctttttggt
     6781 cgtcgcgcag tttgattcgg gtaacgcgtc cgacatcgat gctcaatacc ttaatgaccg
     6841 tattgttgac ttcgatgcct tccgcgctgt ccatcaagag cgtaaccaca ggccccctgt
     6901 tgcggatttc cttaacccaa agccagccgc cggcaatcag cgcgatcagc gggaccagcc
     6961 agacggcgga gaggaaggtg ttgtttttgc ggacgcgtgc ttgagcgtgt ccgtttggag
     7021 gagggctgtt gtcagtcata tttttccgtt tcgttgaaag caatgccgtc tgaagcgcgt
     7081 ttgtcccaaa gcaggcgcgg gtcgaaataa taggcggaca gcatcgtcaa aatcacgacc
     7141 aggcagaaat agactgccgc actgcccgga atgacgcgcg cggcataagt gtggaacgaa
     7201 cacatcaaaa taataatcac aaaaatatca atcatcgacc agcggccgac cgcttcggtg
     7261 atgcggtaga ggtgcgacaa tttctttgcg cccgccggca aagcgaaccg tgccgccgca
     7321 atcaaaaccg acattgccgc aatcttcagc accggcacca aaatactcgc gctgaaaata
     7381 accgccgcaa tcagcctgtc gccctcgtcc cacatataag cgatgccgct aaagatggtg
     7441 ttggcctccg tggcggcagg attggacgaa atcataatcg gcaggatatt ggcagggaaa
     7501 tacaaaacaa ccgccgccgt cagaaacgcc gacgaaatac tcagactttt cggccgtcgg
     7561 cggtacagtt ccgcgccgca caccccgcag ggggattcgg cactgtcgcg gaaatacagg
     7621 cagcggctgc aacaggtttt gccttccgat gccgtctgaa ccgcattatt ccccgtcagc
     7681 cgcccgattt ggaaatacac ccaatgctgg ggaaccgata ccgaagtccg aatcagcata
     7741 accgacagcg cgaacatcag ataaaacgcc ggcccgaagc gaacctttgc cacagacgag
     7801 agcttgatat acgccaccag agtggaaaca aaaaacacat ccaccatcat cgcctgcctc
     7861 aagcgcacca tcacacgcgt tgccaaacgc agcgcaggat acgcctgttt ccgtatcagc
     7921 gcggcataga catacaggca cagcagcaga aacagaaccg gcgcgccgaa agtcagcaca
     7981 aacatcactt cggccaaaaa accataatcc tgaaacacca tcaggcgcat catctcgggc
     8041 agcgaaagga cggatgccgc acccggtatc ccgacctcga tatacgtcat actgtaagca
     8101 aacgccatca aaatcagcga agccgccgca taggcgggcg gaccggaaaa agggtggctg
     8161 cccaccctga agagtttgtg tccgcaacgg ggacagaacg ccgcctctcc cttgtccaac
     8221 tggggcacgt ctgtacggca gccgcattcc gggcaatcta ccgtatgcgg cggcagggct
     8281 tcgtcgcggc agttgccgcg aaggctgtgg gggatatttt cggcaaacgg cttcatcggg
     8341 aaagtggcaa atataaatgg cggcattata aaggaaaaaa agcgatacac ccaatcagga
     8401 tgcaaaaccg gcaggttcgg cagtatgaac aaacccttgg tgtccggcaa aaatattttt
     8461 tgagcggctg cccctccggc cgacaagcct atttgataaa accccgattt tgtaaataat
     8521 cataaaatac ccgcttaaaa atataacgca aatgatattt tttcgtaaaa tatgtgataa
     8581 taaatttcgt ttatgattct ttattatttt tgtatgcggg caagtccgga ttttgcccgc
     8641 accgcatcct tatcccttac cgacaaagga gaacttatga gcgaaaccga aaaccaagcc
     8701 ctgacgtttg ccaaacgcct gaaggcggat accacggcgg ttcacgacag cgtggataac
     8761 ctcgttatgt ctgtccaacc gtttgtcagc aaagaaaact acatcaaatt tttgaaactg
     8821 caatccgtgt tccacaaagc ggttgatcat atctataaag accccgagtt gaacaaagcc
     8881 atttccgagc tggaatacat ggcgcgatac gatgccgtaa cgcaagactt gaaagacttg
     8941 ggcgaagagc cttacaaatt cgacaaagaa ttgccacacg aaaccggcaa caaagccgtc
     9001 ggctggcttt attgcgccga aggatccaat ttgggcgcgg catttttgtt caaacacgcg
     9061 caaaagctgg attacaccgg cgaacacggc gcgcgccacc tcgctccgca tccggacggg
     9121 cgcggcaaac actggcgcgc cttcgtcgag cacctgaatg ccctgaactt aactccggaa
     9181 gcagaagcag aagccattca aggcgcgcag gaagcgtttg ctttctataa agtgattctg
     9241 cgtgaaacct tcggtttgcc ggaaggaaca gaagcccccg aaggcatgat gccgcacaga
     9301 cattaaaaa
//
LOCUS       DAXGCP010000084         9222 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.084, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000084 DAXGCP010000000
VERSION     DAXGCP010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9222
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.084"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            22..1323
                     /gene="aroA"
                     /locus_tag="ACFJCW_001760"
     CDS             22..1323
                     /gene="aroA"
                     /locus_tag="ACFJCW_001760"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HFC4151842.1"
                     /translation="MTESVRLPAASPKPSTVALPGSKSISNRTLLLAALSDNVCEIHS
                     LLKSDDTDRMLEALDKLGVQIEHLAEGRLKVHGTGGRFPNRSADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLVDALRIAGADVEYLGNEHYPPLHVGEREDCGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     EGYRVFKIPADAHYHAPEHLHVEGDASGASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKGRAVQAFDLDANHIPDAAMTLAIVALATRQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPETPTPDAVIDTYDDHRM
                     AMCFSLISLLGVPVVINDPKCTHKTFPTYFEVFSSLTETAE"
     gene            complement(1401..1934)
                     /locus_tag="ACFJCW_001761"
     CDS             complement(1401..1934)
                     /locus_tag="ACFJCW_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HFC4151843.1"
                     /translation="MFSPDKTLFLCLGALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIGRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGAHRYSHVGLYIGNGEFIHAPGSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
     gene            complement(1991..3517)
                     /locus_tag="ACFJCW_001762"
     CDS             complement(1991..3517)
                     /locus_tag="ACFJCW_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HFC4151844.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVLLDNI
                     LQIRHTPHNNGLSDIYLLDDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     MYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVLRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDNPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPEYAYRVTLDKHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
     gene            complement(3629..5170)
                     /locus_tag="ACFJCW_001763"
     CDS             complement(3629..5170)
                     /locus_tag="ACFJCW_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HFC4151845.1"
                     /translation="MIFDNNYHYNAMPIRLLVNIQDADSAGIQTASENNNGTRMGYNH
                     PMEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADLNESPPDMQQAVVA
                     YTLTVALLIPLSSYLADKFGTKKVFFGSIAVFMLGSALCAASGSLFELTLSRVVQGIG
                     GSMLVPIPRLTILRVYEKSKLLNAINYAVMPALIGPALGPLAGGYLVEYASWHWIFLL
                     NLPIGLLGFVLGRNIMPDVKGNDTALDFKGYLTFSVAACLLLLAAESLSHALPPYFAL
                     LPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFSRLGISSIPFLMPL
                     MFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLLWNTKLLAAFIMLL
                     ALPDGNSPLWIWIFLSLAIGACNSLQFSAMNTLTLADLRPQQTGSGNSLMAVNQQLAI
                     SVGIVAGALILKNWTFLIPASSGLHFAFRMTLLSIGGITLASSLVFKRLHVSDGANLT
                     RGTRP"
     gene            5318..6097
                     /locus_tag="ACFJCW_001764"
     CDS             5318..6097
                     /locus_tag="ACFJCW_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HFC4151846.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPNEAFDVAKAQLDLFPENWPIVVPSGSCGGMMKHH
                     WPTLFKNTEYESKAVDCANRIIEFTHFLLAIGYKPEDKGEPVKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKV"
     gene            6094..6795
                     /locus_tag="ACFJCW_001765"
     CDS             6094..6795
                     /locus_tag="ACFJCW_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HFC4151847.1"
                     /translation="MSARENILAKLKKAGALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNID
                     PIAFEREIDTWKTEFFTNIDAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            6792..8246
                     /locus_tag="ACFJCW_001766"
     CDS             6792..8246
                     /locus_tag="ACFJCW_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HFC4151848.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHIRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACQII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIVITGIEKVVAKLSDVPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(8395..8814)
                     /gene="fitB"
                     /locus_tag="ACFJCW_001767"
     CDS             complement(8395..8814)
                     /gene="fitB"
                     /locus_tag="ACFJCW_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin FitB"
                     /protein_id="HFC4151849.1"
                     /translation="MILLDTNVISEPLRPQPNERVVAWLDSLILEDVYLSAITVAELR
                     LGVALLLNGKKKNVLHERLEQSILPLFAGRILPFDEPVAAIYAQIRSYAKTHGKEIAA
                     ADGYIAATAKQHSLTVATRDTGSFFAADVAVFNPWHD"
     gene            complement(8814..9050)
                     /gene="fitA"
                     /locus_tag="ACFJCW_001768"
     CDS             complement(8814..9050)
                     /gene="fitA"
                     /locus_tag="ACFJCW_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin FitA"
                     /protein_id="HFC4151850.1"
                     /translation="MASVVIRNLSEATHNAIKFRARAAGRSTEAEIRLILDNIAKAQQ
                     TVRLGSMLASIGQEIGGVELEDVRGRNTDNEVSL"
BASE COUNT         2186 a         2406 c         2593 g         2037 t
ORIGIN      
        1 tctttatatt tacgttttgc catgaccgaa tccgtccgcc tccccgccgc ctcgcccaaa
       61 ccttccaccg tcgccctgcc cggctccaaa agcatcagca accgcaccct gctgctcgcc
      121 gccctgtccg acaatgtttg cgaaatccat tccctgctca aatccgacga taccgaccgt
      181 atgctcgaag cactcgataa actcggcgtt caaatcgaac atcttgccga aggccgtctg
      241 aaagtacacg gcacgggcgg acgcttcccc aaccgctctg ccgatttgtt tttgggcaac
      301 gcgggcacgg cgttccgtcc gctgaccgcc gcgctggccg ttttgggcgg cgattatcat
      361 ctgcacggcg tgcctcgtat gcacgaacgc cccatcggcg atttggtcga tgcgttgcgg
      421 attgccggcg ccgatgtcga atatctcggc aacgaacact atccgccgct tcatgtcggc
      481 gaacgtgaag actgcggcga gcgcgtgatt ccgattaaag gcaatgtgtc cagccagttt
      541 ctgaccgccc ttttgatggc gttgccgctg accgggcagg cgtttgaaat ccgtatggtc
      601 ggcgagttga tttccaagcc ctatatcgac attactttga aactgatggc gcaattcggc
      661 gtacaggttg ccaatgaagg ctaccgcgtt ttcaaaatcc ctgccgatgc gcactatcac
      721 gcacccgaac acttgcacgt cgaaggcgat gcctccggcg cgtcctactt cctcgcagcc
      781 ggtttgattg ccgccacgcc cgtccgcgtt accggcatcg gcgcaaacag catacagggc
      841 gatgtcgcct ttgcccgcga actggaaaaa atcggtgcgg acgtggtttg gggcgaaaac
      901 ttcgtcgaag tctcgcgccc gaaaggacgc gccgtccaag cctttgattt ggatgcgaac
      961 catatccccg atgccgcgat gaccctcgcc atcgtcgcgc ttgccacaag gcaaacctgc
     1021 acgcttcgca acatcggttc gtggcgcgtt aaggaaaccg accgcatcgc cgcaatggcg
     1081 aacgagttgc gcaaactcgg tgcaaaagtc gtcgaagaag ccgaagcgat tcacattacc
     1141 ccgcccgaaa cgccgacacc cgatgccgtc atcgacactt acgacgacca ccgcatggcg
     1201 atgtgtttct cgctgatttc gctgttggga gtacccgtcg tcatcaacga cccgaaatgc
     1261 acccataaaa ccttcccgac ttattttgaa gtgttctcat cactgaccga aacagcggaa
     1321 taaggcggaa aaatgccgtc tgaaacccga aaacagggct tcagacggca ttttgccgcg
     1381 attccggcgc ggcgggcggc tcattctgta aaaaacgtat gcgctccaag gtagtttttg
     1441 gcgtaaaacg gtgtggagag tttttcggtt ttgatggttt tgccgctgcc gggggcatgg
     1501 atgaattcgc cgttgccgat gtagagtccg acgtgtgagt agcggtgtgc gccgccggtg
     1561 ttgaagaata cgaggtcgcc ggccttgagg cggctgtcgg ggattttgcg gcttgccgcc
     1621 gccatgtcgc gggcggtgcg cggcagcttg acgttgaggg cgtttttgta aacgaattga
     1681 atcatgccgc tgcagtcgaa gccggttgcg gtgctgctgc cgccccattt gtagggcgtg
     1741 ccgatgagtc cgaggctgtg gagcatgagt tcctgcgagc cttgtgtgcg gccgatgtgg
     1801 ctgatgcgga cggcttggat ttgccggact gtctgtttgg gtttcggttg gcggtgtttg
     1861 ccggaggtcg tgccgcatga ggcgaggagc agtgcgccga gacagaggaa aagggttttg
     1921 tcgggggaaa acatggtttt ttcctttgcg ggttcggata tgccgtctga aggtgtttca
     1981 gacggcattt ctataataaa ccttcgatgg gcagcaggga taggattttt gcggcgatgc
     2041 gtttccaaag tttggcttcg ggttcgttcg ggtaggtttt tcgggtggcg ggatcgtgcc
     2101 attgcaggcg gttgtgtttg tcgagggtaa cgcggtaggc gtattcgggt gtggtatcgg
     2161 cgagggtgcg ctccatctgt tctgcgattt tggggctttc gatgacgacg cccatttcgg
     2221 tattgagccg tgcggaacgg gggtcgaggt tgaatgagcc gatgaagatg cgtttgccgt
     2281 ccacaatgaa ggttttggca tgcaggctgg ttacggagct gccggtcagg cctttgtctt
     2341 ttgtggcggg gacggcatgg ttgggttgca gctcgtagag tttgatgccg gctttgagca
     2401 gcggttttcg gtatttgacg tagccggaat ggacggcggc aacgtcggtc gcctgtagcg
     2461 agttggtcag gacggtaacg tctatgccgt cctgcaccag ttttgccagt gcgtctgtgc
     2521 cggattttgt agggacgaaa tagggtgaaa ccagatagac gcttttttcg ggctgtttga
     2581 gcgcgtcttg cagcctcccg gcaatcggcg gtttgcggcg gtcgcggtcg agtccttttg
     2641 cagggttgtc gctgatcagg cgggtttgga cgctctgcca gtcgatgcgt cccgtctgta
     2701 ttttttggta gaggggcgac tgttcgacgg tttcgcggta gcgcaggagc gcgtgtctgg
     2761 atgtttcgtc gttgtatccg agtgcttgaa gacccttgcc gatgttgccg ctgcggatga
     2821 tgcgcgtggc gttgtgggcg gaatggcttg cccagtagcg gtcgaagtcg tgcgatactt
     2881 cgccgacgac gctgccggtg gcgaggatgt ccaggtcggc gaaaacggtg tcctcaccga
     2941 ctttgaagta ttcgtcgccg atattgcgtc cgccgagtat ggtggcgcgg ttgtcggcgg
     3001 taaaggattt gttgtgcatg cggcggttga ggcgggggaa gtcggtcagg tagccgagtg
     3061 cgcgccattt gcgtaggacg aaggggttga acaggcgcac ttcgatattg ggatggctgt
     3121 cgagggcgag caggagatcg tccaacccgc gcgtgttgtt gtcgtccaac agcaggcgta
     3181 cgcgcacgcc gcgttctgcg gcaaggtaca tgaggttgaa cagcagcctg ccggaaatgt
     3241 cgttgcgcca aatgtagtat tgcaaatcga ggctgtgttc ggcagattcg ataagggcgg
     3301 cgcgggcggc aaaggcttcg tgggggtcgt cgagcaggta gatgtcggat agcccgttgt
     3361 tatgaggggt gtgccggatt tgcaggatgt tgtccaggag gacaggtttg gaagtattga
     3421 aatgacggct ttccgtccgt tcttccagtg ggggcaacca tgaagaacat gaacagagaa
     3481 ggaggcataa aagggaaatg aggctgcgtg ttttcatcgg ggatatagtt tcagacggca
     3541 ttgcctgtat tttggggtct gtatgcattg aaatgaagca tcataatcta aaggttggaa
     3601 tgggtaaaag ttttgtcggg atgcggggtt aaggccgcgt gcctcttgtc aggtttgcac
     3661 cgtctgaaac gtgcagacgc ttaaaaacca acgacgaggc aagggtgatg ccgccgatac
     3721 tgagcagggt catacggaag gcgaaatgca ggcctgaaga agccggtatc agaaatgtcc
     3781 agtttttaag gattaatgcg ccggcaacaa tgcccacgct gatggcaagc tgttggttga
     3841 ccgccatcag gctgttgccg ctgccggtct gttgcgggcg caaatcggcg agggtcagtg
     3901 tgttcatggc agaaaactgt agggagttgc atgcgccgat cgccagcgag aggaaaatcc
     3961 aaatccacag cggcgagttt ccgtcaggca gggcgagcag catgatgaag gcggcaagca
     4021 gcttggtgtt ccaaagcagt accgtgcggt agccgaaacg tttcatgagc ggtgcaatca
     4081 gcggtttgac cagcagcgaa gacagggcga cgggtgcgac cagccagccc gacaggcttg
     4141 cgccgaagcc gaaagcgact tgaaacatca ggggcatcag aaaaggaatc gagctgatgc
     4201 cgagacggct gaacagattg cccgccagtc ccaaacggaa ggtgcgtatc agaaacaggt
     4261 cggcggaata aatcggtttg gacgcggttt tcatatgtcg gaaataacgg cgtgcaaaca
     4321 gcagtccgcc gcacagcggt aacagtgcaa aatacggagg cagcgcgtgc gacaggcttt
     4381 ctgccgcaag cagcagcagg caggcggcaa cggaaaaggt cagatagcct ttgaaatcca
     4441 gagcggtatc gttgcctttg acatcgggca tgatgttgcg tcccaatacg aaacccagca
     4501 gaccgatggg caggttgagc aggaaaatcc agtgccacga agcgtattcg accagataac
     4561 cgcccgccag aggtcccaac gcagggccga tcagtgcagg catgaccgca taattgatgg
     4621 cgttgagcag cttcgatttt tcatatacac gcaagatggt cagacgcggt atcggaacca
     4681 gcatcgaacc gccgatcccc tgaacgacac gggaaagcgt caattcaaac agcgaacccg
     4741 atgcggcgca caatgccgat ccgagcataa aaacggcaat cgaaccgaaa aagacttttt
     4801 tcgttccgaa cttgtccgcc aaataactgc tcaaaggaat cagcagggca accgtcagcg
     4861 tataggcaac gactgcctgt tgcatatccg gaggcgattc gttcaggtcg gcggcaattt
     4921 cgggcagtgc ggtatttaaa atggtcgcat ccaacatctg cataaaaatg gcaattgcca
     4981 gcagaagcgg cagccaaggg gatggtgcgc gggcggacag ggtgtttttt tccatagggt
     5041 gattgtaccc catccttgtg ccgttattgt tttcagatgc tgtctgaatg ccggcagagt
     5101 cggcatcctg aatgttcaca agcaaacgaa tcggcattgc attgtaatga taattattat
     5161 cgaaaatcat cagagtaagg tacagtaagc gttatggggc agtttgtaag aaaaaccgga
     5221 ttatttttta aaattagact tgacccgcaa cggtcaatta cttaaagtaa acgcttacct
     5281 ttctacagaa aaaacgggtc tcccgttatc aaaaaatatg agcgcaacca ttcccccaaa
     5341 aatcatccga tacgacagca atccgacaga tgtctatttt ttcggcactt gcgtccttga
     5401 tctttttatg cccgaagcag gcatggatgc cattgcccta atcgagcagc agggcatacg
     5461 cgtccatttc ccgatggcgc aaagctgctg cggtcagcct gcctattcat ccggccatcc
     5521 gaacgaagcc ttcgatgtcg ccaaagcgca actcgacctt ttccccgaaa actggccgat
     5581 tgtcgtaccg tccggctcat gcggcggcat gatgaaacat cactggccta ccctgtttaa
     5641 aaatacagaa tacgaatcca aagcggttga ttgtgccaac cgtatcattg agtttactca
     5701 tttcttgctt gccatcggct acaagcctga agacaaaggc gagccagtca aagtcgccgt
     5761 tcacacttcc tgtgccgccc gccgagaaat gaatgtccat ctttcaggct ggcagttgat
     5821 tgacggtatg gaaaacgtcg aacgcatcgt ccacgaccac gaaagcgagt gttgcggctt
     5881 cggcggcaca ttctccgtca aacaagccga tatttccggc gcgatggtaa ccgacaaagt
     5941 tgccgcgctg aaagaaaccg gcgcaaccga aatcatcagc gcggactgcg gctgtatgat
     6001 gaacatcgga ggcaaaatcg ccaaggacga gccggatatg ccgcgtccga agcatatcgc
     6061 atccttcttg ttggaacgca ccggaggcaa agtatgagcg cgcgcgaaaa tattttggca
     6121 aaactgaaaa aagccggcgc attgccgatg gaagagcctg cggtttttga ttattaccgc
     6181 gaaaagggcg tttcttggga cagcgaagcc gagcgtctga aacattgggc tgccgccatg
     6241 cgcgcggtca aaaccgaaat ctattgggtg acgaaaagca attggatgca ggttttccgc
     6301 gaagcggcag aaggcaaggg tttaaaaaac atcctgctgc ccttggcaac cgaacacgga
     6361 caaattgccc gtgccgcatt ggcgggcagc aatatcgacc cgattgcctt cgagcgcgaa
     6421 atcgatactt ggaaaaccga gtttttcacg aacatcgatg caggcttcag cggcgcgcaa
     6481 tgcggcatcg cccgcaccgg cacgctgatg ctgttttcca gccctgaaga accgcgtact
     6541 ttgagcctcg ttccgcccgt gcatttctgc ctgttcgata cgtccaagat gtacaacgag
     6601 tttcacaacg ccgtcgaagg cgaaaaactg gtggaaaacg gtatgccgac caatgtattc
     6661 ctgatttccg gcccgtccaa aaccgcagac atccagttga cgctcgctta cggtgcgcac
     6721 ggtccgcgtg atttggtcat cctcgccatt ttgcccgacc acatttcccc tgccgatttg
     6781 gaggaaaacg catgactacg caaaccatca agttccacat gaagccggaa actttcaaac
     6841 aaaacgccgc aatttccctt caagacaagc ccttgcgtaa aagcctgcgt accgcgatgg
     6901 atatgctgat gaccaagcgc aaagccgttt tgaccgacga agaagagttg caaagcctgc
     6961 gcgatttgtg cgaacacatc cgtcagcgtt ccctctccaa attacccgcg ctgctggagc
     7021 agttggaaga aaacctgact aagttgggcg tgaaagtaca ctgggcggaa acccctgccg
     7081 aagcctgcca aattatccac gacatcatca cagccaaaaa cggcaagctg atggtcaaag
     7141 gcaaatccat ggtcagcgaa gaaatcgagc tgaaccatta tcttgaagca aaaggcatta
     7201 aggcggtgga aagcgacttg ggcgagttta tcgtccaaat ggcaggcgaa aaaccgaccc
     7261 atatcgtgat gcccgcaatc cataaaacca aagaacaggt cagcgaactg ttccaccaaa
     7321 acctcggcac accgcttaca gacgacgtgg accaactgac cggattcgcc cgcaaagccc
     7381 tgcgcgatat ttacagcact gccgatgtcg gcttgagcgg cgtaaacttc gccgttgccg
     7441 aaacgggcac gctgtgtctg gtcgaaaacg aaggcaacgg ccgcttaagt actaccgttc
     7501 cgcccgtaca tatcgtcatt acgggtattg aaaaagttgt cgccaagctg tctgatgttc
     7561 cgcctttgta cagtctgctg ccgcgttccg ccatcggtca gaacattacc acttatttca
     7621 atatgattac cggcccgcgc cgcagtgaag aattagacgg tccgcaggaa atgcacttgg
     7681 ttttgctcga caacggccgc agccaagctt atgccgaaga ccaaatgcgc cgcaccctgc
     7741 aatgtatccg ttgcggcgcg tgtatgaacc attgcccggt ttatacacgc atcggcggcg
     7801 cggcatacgg cacaacctat cccggtccga ttggcgagat tatttccccg cacctgttgg
     7861 gtcttgatgc cacccgcgac ctgccgaccg cctgcacgat gtgcggcgcg tgcgtggaag
     7921 tttgtccggt acgcatcccg attaccgaac aaatgcaacg tttgcgcgtt gaagcacaac
     7981 gttcgccgac cgaaaccgtg ccgcacccca tccgagggca aggcgcatcg cataccttcg
     8041 gcgaacaaat ggcgtggcgc acattcaacg gtattttcag cggtagcaaa acctaccgcg
     8101 ccttcggttg ggcagccacc aagttccgca atctgacccc gcgcaaacag ttgggttgga
     8161 cgcaaaaccg cgtaccgatg aaaccggcga agaaaaccct gcacgaactg atggcggaaa
     8221 aaatgcgcca aaaagaacag gcataaaaag ttgttcgcaa aaataccgtc tgaaacccga
     8281 aaacagggct tcagacggcc tgaaaagcag cctgaacgcg caaaaataaa taatgaaacg
     8341 gaatgctaag acgctttcag gcagcctgac attaaggctg cttaaaagcg tcttttaatc
     8401 gtgccacgga ttgaacaccg cgacatcggc cgcaaaaaat gagccggtat cacgcgtagc
     8461 aactgtcaaa ctgtgctgtt ttgcagtggc ggcaatatag ccgtctgcgg cagcaatctc
     8521 tttgccatgt gttttggcat aggaacgaat ttgcgcatag attgcggcaa ccggttcatc
     8581 aaaaggcaga atccgccccg caaataaagg caaaatggat tgttccaaac gttcgtgcag
     8641 cacattcttt ttcttgccat tgagcaacaa cgccacaccc aaacgcaatt ctgcaacagt
     8701 aatggcagac aaatacacat cttccaatat caaactatcc aaccatgcca ccacacgttc
     8761 attgggttgt gggcgcaaag gttcggaaat cacattcgtg tccagcaaaa tcatcacaaa
     8821 gaaacctcgt tatcagtatt acgaccgcgt acgtcttcca gctcaacacc tccgatttcc
     8881 tgccctattg atgccaacat tgaccccaaa cgtacagttt gttgtgcttt ggcgatgtta
     8941 tccaaaatta agcggatttc tgcttcggta ctgcgccctg cggctcgcgc acggaatttg
     9001 attgcgttgt gcgtggcctc ggataaattt ctaatcacaa cagaagccat tgcctttcct
     9061 tcctgaaaaa agtttttcaa atgctatcaa aataaaaaaa atgatagcaa tctatttttt
     9121 aacgcctgcg gatgcctgaa aattcaggtg gccgcaggcg tttttttaca tctaaaaaaa
     9181 cgtctcccct ccctctttct gataaataaa aaacagtcgc tc
//
LOCUS       DAXGCP010000085         8711 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.085, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000085 DAXGCP010000000
VERSION     DAXGCP010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8711
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.085"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            65..1294
                     /gene="sstT"
                     /locus_tag="ACFJCW_001769"
     CDS             65..1294
                     /gene="sstT"
                     /locus_tag="ACFJCW_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HFC4151851.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALAVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            1445..2726
                     /locus_tag="ACFJCW_001770"
                     /pseudo
     CDS             1445..2726
                     /locus_tag="ACFJCW_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699266.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
     gene            2726..2929
                     /locus_tag="ACFJCW_001771"
     CDS             2726..2929
                     /locus_tag="ACFJCW_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC4151852.1"
                     /translation="MLMPPEAQVFITAGRRVQIIKQAPEKGGIPKSGTEIAARIGGIP
                     QPAGETVGSSRNVGYFRPPFSGC"
     gene            3040..3237
                     /locus_tag="ACFJCW_001772"
     CDS             3040..3237
                     /locus_tag="ACFJCW_001772"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151853.1"
                     /translation="MNPALRGGRVRAGLGKGIAFPNRGGATGCALCAERVCGNGMPSE
                     AGAFRRHCDVWGAGPVQIRIS"
     gene            complement(3230..3445)
                     /locus_tag="ACFJCW_001773"
     CDS             complement(3230..3445)
                     /locus_tag="ACFJCW_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151854.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLEAELFFKITLTMAGL
                     FVIILAALLVCGQYFSEKKMKDNGFIN"
     gene            complement(3438..3653)
                     /locus_tag="ACFJCW_001774"
     CDS             complement(3438..3653)
                     /locus_tag="ACFJCW_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
                     /protein_id="HFC4151855.1"
                     /translation="MKEYKVVIYQESLLSSLFFGAAKVNPVNFSAFLNKQTPEGWRVV
                     TMEKDLRRMLLFFKREAYVVILERDRV"
     gene            complement(3856..5199)
                     /gene="argG"
                     /locus_tag="ACFJCW_001775"
     CDS             complement(3856..5199)
                     /gene="argG"
                     /locus_tag="ACFJCW_001775"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HFC4151856.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEIEPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAVTGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEGAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLSLGEGSVLPQLGNKQ"
     gene            5324..6124
                     /locus_tag="ACFJCW_001776"
     CDS             5324..6124
                     /locus_tag="ACFJCW_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HFC4151857.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFAFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDRTRQTAAAALDLPVVRHPEAAKFIEG
                     ITRKRGKPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLETYYAGRFNQTERGSRSVYVFEQPESRITPIIEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            6164..7150
                     /locus_tag="ACFJCW_001777"
     CDS             6164..7150
                     /locus_tag="ACFJCW_001777"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HFC4151858.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRAVSTLILVALIAGIFRKDEAALQLAGNTPHTAVVNLYGKIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIVIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIVGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGGRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVSEALQAVR"
     gene            7811..8062
                     /locus_tag="ACFJCW_001778"
                     /pseudo
     CDS             7811..8062
                     /locus_tag="ACFJCW_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(8060..8259)
                     /locus_tag="ACFJCW_001779"
                     /pseudo
     CDS             complement(8060..8259)
                     /locus_tag="ACFJCW_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            8360..8711
                     /locus_tag="ACFJCW_001780"
                     /pseudo
     CDS             8360..8711
                     /locus_tag="ACFJCW_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_086557955.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         2041 a         2178 c         2456 g         2036 t
ORIGIN      
        1 acagagaatg agttttcttt taaaatacaa cattttttaa catatcacaa cataaggaag
       61 aattatggcg ttcggcaaat ccttatttca tgcgatcggc cgcgtcagcc tggtcaggca
      121 gattgccgcc ggtttggcgt tgggcatcgt aatcggttcg gtttcaccgc aactgggctt
      181 ggcggcaggc ttgttcggca gcctgtttgt cggcgcgctc aaagcggtcg cgccggtttt
      241 ggtatttatt ttggtggcgg ccacaatcgc gcagcaccaa aaaggcaaca aggcgcatat
      301 caggccgatt atcgtccttt acctcatcgg cacgttttcc gcagccctga ccgccgtcat
      361 cgccggtatg gttttcccga cgcacattgt tttggcgggc gcgggcgatg tgtccgccgc
      421 gccgccttcc ggcattgtgg aagtgttgaa atcgctgctg atgaacctgg tcgccaaccc
      481 gattaacgcg attgccaatg ccaactatat cggcattttg gcttgggctt tggttttggg
      541 cgcggcgttg cggaatcacg gttcggacgt tacgcggcag gtcgttgccg atttggcgga
      601 agcggtttcc accgtcgtga aatggattat ccgttttgcc cctttgggta ttttcgggct
      661 ggtgtcgtcc acaatcgcgg agacgggttt cggcgcgctg gcgggttatg cgaagctgct
      721 tgcggtgctg ttgggctgta tggcgtttat cgcgctggcg gtcaatcccg ccatcgtgtg
      781 gtggaaaatc cgccgcaacc cttatccgct ggtgtttacc tgcctgcgcg aaagcggcgt
      841 gtatgccttc tttacccgtt cttccgccgc caatatcccc gtgaatatgg ctttggcgaa
      901 aaagctgggg ctgcacgaag acacttattc gatttccatc ccgttggggg cgaccgtcaa
      961 tatgggcggc gcggcgatta cgattaccgt tttggctatg gcggcggcgc acacccaagg
     1021 catacaggtt gattttgcca ccgcgctgct gttgagcctg gtggcgacgg tcagcgcgtg
     1081 cggcgcgtcc ggcgtggccg gcggttcgct gctgctgatt ccgctggcgt gcagcctgtt
     1141 cggcatcagc aacgatgtcg ccatgcaggt ggtcgccgtc ggcttcatca tcggcgtgat
     1201 tcaggattcg gcggaaacgg cgttgaattc ttcaaccgac gttttgttta ccgctgccgc
     1261 cgatttgggc cgacagagaa accgtgcgga ataaaccaag ctatgccgtc tgaagcccgt
     1321 ttggcgttca gacggcatat ttttacaatt ttatgggcat atggcggaaa caataccggc
     1381 tgccttgaat atgtttcaac acacagggcg atacataaag cgtcgcccta tgaaggagat
     1441 gatgatgttt aaacgcagtg tgattgcaat ggcttgtatt tttccccttt cagcctgtgg
     1501 gggcggcggt ggcggatcgc ccgatgtcaa gtcggcggac acgccgtcaa aaccggccgc
     1561 ccccgttgtt gctgaaaatg ccggggaagg ggtgctgccg aaagaaaaga aagatgagga
     1621 ggcagcgggc ggtgcgccgc aagccgatac gcaggacgca accgccggag aaggcagcca
     1681 agatatggcg gcagtttcgg cagaaaatac aggcaatggc ggtgcggcaa caacggacaa
     1741 ccccaaaaat gaagacgcgg gggcgcaaaa tagatatgcc gcaaaatgcc gccgaatccg
     1801 caaatcaaac agggaacaac caacccgccg gttcttcaga ttccgccccc gcgtcaaacc
     1861 ctgcccctgc gaatggcggt agcgattttg gaaggacgaa cgtgggcaat tctgttgtga
     1921 ttgacggacc gtcgcaaaat ataacgttga cccactgtaa aggcgatcct tgtaatggtg
     1981 ataatttatt ggatgaagaa gcaccgccaa aatcagaatt tgaatcgtta agtgatgaag
     2041 agaaaattaa gaaatataaa aaagatggag aaaagtttac tggtttggtt gctataaaag
     2101 ttgaaaataa tgggttgaat aaatatacca ttatttatca agctcagcct actcgttctg
     2161 cacggtcgag gaggtcgctt ccggccgaga ttccgctgat tcccgtcaat caggccgata
     2221 cgctgattgt ggatggggaa gcggtcagcc tgacggggca ttccggcaat atcttcgcgc
     2281 ccgaagggaa ttaccggtat ctgacttacg gggcggaaaa attgcccggc ggatcgtatg
     2341 ccctccgtgt gcaaggcgaa ccggcaaaag gcgaaatgct tgttggcacg gccgtgtaca
     2401 acggcgaagt gctgcatttc catatggaaa acggccgtcc gtacccgtcc ggaggcaggt
     2461 ttgccgcaaa agtcgatttc ggcagcaaat ctgtggacgg cattatcgac agcggcgatg
     2521 atttgcatat gggtacgcaa aaattcaaag ccgccatcga tggaaacggc tttaagggga
     2581 cttggacgga aaatggcggc ggggatgttt ccggaaggtt ttacggcccg gccggcgagg
     2641 aagtggcggg aaaatacagc tatcgcccga cagatgctga aaagggcgga ttcggcgtgt
     2701 ttgccggcaa aaaagatcgg gattgatgtt gatgccgccc gaagcgcagg tattcattac
     2761 ggcgggacga cgcgttcaaa tcatcaaaca agcccccgaa aaaggcggca tcccaaaatc
     2821 cggcactgaa attgccgcgc gtatcggcgg cattccgcag cctgccgggg aaaccgtcgg
     2881 cagcagccgg aatgtcgggt atttccgccc gcctttttcg ggctgttgaa atatgaaaat
     2941 aaagcatagg ccgtctgaat gttcagacgg cctgtttttt taacggctgt gtttcaacac
     3001 tccgccggtt ccaaccggca gcagcaggga gataatgcct tgaaccccgc tcttcggggc
     3061 ggcagggttc gggccggttt ggggaaaggc atcgcctttc cgaatcgggg cggtgcaacg
     3121 gggtgcgcct tatgtgccga aagggtttgc ggcaacggta tgccgtctga agcgggtgcg
     3181 ttcagacggc attgtgatgt ttggggcgcg ggtccggttc aaatccgcat cagttgataa
     3241 acccgttgtc tttcattttc ttttcggaaa aatactggcc gcataccagc agggcggcga
     3301 ggatgatgac aaacagccct gccatagtca gtgtgatttt gaagaacaat tcggcttcga
     3361 gaaaagaaaa ccaaagttgc acaatcagca gcagcaccca gccggcaaac agtccgagac
     3421 aggcataaac gccgagctta aacacggtcc cgctccaaaa tgacgacgta ggcttcgcgt
     3481 ttgaaaaaca gcagcatacg gcgcaaatct ttttccatcg ttacgacccg ccagccttcg
     3541 ggggtttgtt tgttgaggaa cgcgctgaaa ttgacggggt tgacctttgc cgcgccgaaa
     3601 aacaggctgg acaacaggct ttcctgataa atgacgactt tgtattcttt catcgtattt
     3661 ccttttcggt tgaaaccccg ccctttgggg cggtaggatc agactttatt tgggagggaa
     3721 ccccttccaa atcaggacga tacataggtc ggtgctttat gtatcgtcct gtgtgttgaa
     3781 acataggatt cctttaatca agggattgcc ttttcaggca atcccttaaa ttgcagcgat
     3841 gcaatgcggc gaaatttatt gcttattgcc caactgcggc aataccgagc cttcgcccag
     3901 cgagagcaaa ccgctttgcg aataaatacc cagtttggcg cgggtgtcgg tgatgtcgag
     3961 gtttcgcatc gtgagctgtc cgatgcggtc gagcggtgtg aacgccgcac cttcgacttt
     4021 ttccatactc aggcgttcgg gttggtaggt caggttgggc gattcggtgt tcagaatcga
     4081 gtagtcgttg ccgcgccgca gttcgagggt aacttcgccg gtaacggctt tggcgaccca
     4141 gcgttgggcg gtttcgcgca acatcaaggc ttggctgtcg aaccagcggc cttggtagag
     4201 caaacgtccg aggcgcaggc cgttgatgcg gtattgttcg atggtgtctt cgttgtggat
     4261 gccggtaacc aagcgttcgt aggcgatgtg gaacaatgcc atgcccgggg cttcgtagat
     4321 gccgcgcgat ttggcttcga tgatgcggtt ttcgatttgg tcgctcatac ccaagccgtg
     4381 gcggccgccg atgcggttgg cttcgaggaa gagttcgacg gggtcggcgt attctttgcc
     4441 gttcaatgca accggcacgc cttcttcaaa gcgcacgctg acttcttcgg gttcaatttc
     4501 gacgttttcg tcccagaagg caacgcccat gatgggctta acgattttga tgcccgagtt
     4561 caaaaattcc aagtctttgg cttcgtgggt cgcgccgagc atattggaat cggtggagta
     4621 ggctttttca accgacattt tgtagttgaa gccgttggca atcagaaatt cgctcatttc
     4681 gtgacggccg ccgagttcgt cgataaattg ctggtcgagc cagggtttgt agattttcag
     4741 cgcgggattg gtgagcaagc cgtagcggta gaaacgctcg atgtcgttgc ctttgtaggt
     4801 gctgccgtcg ccccagatat tcacatcgtc ttctttcatg gcggaaacga gcatggtgcc
     4861 ggtcacggcg cggcccagag gcgtggtgtt gaaataggcg atgccgccgg tggaaacgtg
     4921 gaacgcgccg cattggatgg cggcgatgcc ttcgtgtgcc agttgtgcgc ggcagtcgat
     4981 caggcgggcg ttttccgcac cgtattccat tgcttttttg ggaatggcgt tgtaatcgtc
     5041 ttcgtcgggc tggccaaggt tggcagtgta ggcataaggc agcgcgcctt tgagtttcat
     5101 ccacaacagc gcggcagagg tatcaagacc gccggagaag gcgatgccga ctttctgacc
     5161 gacggggagg ttttgtaaaa tagtatggtt ttggttcatg aaaaaatcct cgatagcttg
     5221 aaaaatcaaa gccattatct tataaataga aaatattgtc agccatcatg ccgtctgaac
     5281 gggtattccg ccgtttcagg cggtatttaa aaccgaaaac attatgaacg cgttcaacct
     5341 catcatcatc ggagacgaaa tcttacacgg cagccgccaa gacaagcatt tcgccttttt
     5401 taaatccctg ctcgaatcca aagggctgaa gctcaatcag gtgcaatatc tgcccgacga
     5461 acccgatttg ctggtcaggc aactgcgccg cagcttttca gacggcatac cgacgttcgt
     5521 taccggcggc atcggcgcca cgcccgacga ccgcacgcgc caaaccgcag cggctgcttt
     5581 ggatttgccc gtcgtccgcc atcctgaagc cgccaagttt atcgaaggca taacccggaa
     5641 acgcggcaag ccgctcgatt cgcccgaaca cgcccaacgc ctgaaaatgg cggatttccc
     5701 cgagggcgca gagcttgtgc ccaacccgtt caacaacatc gccggatttt ccatccgcga
     5761 gcattatttc ttccccggct ttcctgtgat ggcgcacccg atggcggaat gggttttgga
     5821 aacttattat gccggccgct tcaaccaaac cgaacgcggc agccgcagcg tgtatgtgtt
     5881 tgagcagccc gaatcgcgca ttacgccgat tatagagcat atcgagcaaa cttatcccgg
     5941 cgtgcgttcg tacagcctgc ccagcgtcgg ttggacgcat tcagacggca cgcaggtcaa
     6001 accgcacatt gagttcggca tcaaagccga aggagaagcc gtcaaccttt tggacgcggc
     6061 gtgggcggaa gtgttgcaca gcttggacgg attgggagca gagctgaaaa atcgggtaaa
     6121 ctgaaaactg tttgcccaaa tcggacgata tttaaggaaa accatgcaat accgaatcag
     6181 aagagaaaac gaagcacccg aagcaaaaaa tgcgggggaa accttatggg agcgcgacat
     6241 tatgcgcgaa gtgctgctgt ccgcctatcg ggacaggcgc agggagcgga tgtggaaaaa
     6301 catctggcgc gccgtcagca ccctgattct ggttgccctg attgcaggca ttttccgaaa
     6361 agacgaagcc gcattgcagt tggcgggcaa cacgccgcat accgcagtcg tcaacctgta
     6421 cggcaaaatc ggcaacggcg tagaagacca ggtcaaaaaa ctcaaagacg ggatggaggc
     6481 cgcctacaaa aacccgcagg caaaagccat cgtcatccgc gccaacagcc ccggcggttc
     6541 gcccgtcgtc tccaacaccg cttttgaaga aatacgccgt ctgaaggcgc agcaccccgg
     6601 catccccgtt tatctcgtgg cagaggatat gtgcgcgtcc ggctgctact acatcgcggc
     6661 ggcggcggac aaaatctatg ccgacccgtc cagcatcgtc ggcagcatcg gcgttatcgg
     6721 cagcagtttc gacgcgaccg gcctgatgga aaaaatcggc gtaaaacgca gggttaaaat
     6781 tgcgggcagc aacaaaggca tgggcgatcc gttttcgccc gaaacgcccg aacagtcgaa
     6841 aatctgggaa gaaatgctga ccggcataca cggcgaattt atcaaagccg tcaaaaccgg
     6901 acgcggcggc cgcctcaaat tccgacaata tcccgacgtg ttcagcggtc gcgtgtacac
     6961 aggcgcggac gcgctgaaag tcgggctggt ggacggactc ggcaatattt acagcgtggc
     7021 gcgagacgtg gtcaaagctc ccgatgtggt ggattacact ccgaaggacg atttcggcag
     7081 aatcttgggc agacgcttcg gagcagaact caaagcaagc gtttcggaag ctctgcaggc
     7141 cgtccggtag cgttgtttac agtatttcta agggaatacc agaataaaaa tatacacaaa
     7201 aacactcacc tccccagtat gctgccacta agtcagccgc gttactattt accgtgcact
     7261 taaagccgca aaaggcaggt tgtccccggg aggttttgtg catcctgata ccgatcggtt
     7321 gctgttgctg ttgctgttgc tcaaaggacg gaaggccgcc gataaacgag attacctgtt
     7381 tgtcgctatt gacgattttt atactctgcc attttgccgg acaaaaccgc agacagtgct
     7441 gccaagtttc tgaccgaaca tctggctgac ccctgcttgt acctggttga gtacgtttac
     7501 tctgacaatg ataggtaata taaagagccg tccaacatgc tttcggtgca gcttgttatg
     7561 ataatgggat tggttggagg cttgcccgat ttgcttgtcc gcagaccaac ggtaaggcgg
     7621 agcgggttat ccgtaccttg atggagatgt ggcatgagga acagtcgttt gacagtccgg
     7681 aacatcagca aaaggagttg tgctgcttta ttaatttagg cgctgtccta gataactagg
     7741 gaaattcaaa ttaagttaga attatcccta tgagaaaagc cgtctaagcc ggtataaaca
     7801 aaataaactc attgggctat ttgtcgcagg cgtaactgca agaacagcgg cagagttggt
     7861 aggcgttaat aaaaataccg cagcctatga ttttcatcgt ttacgatgac tgatttatca
     7921 aaacggtccg catttagaaa tgtttgatgg cgaagtagaa gcagatgaaa gttattttgg
     7981 cggacaacgc aaaggtaaat gcggtcgcgg tgctgccgga aaagtcgcag tattcaggct
     8041 tctcaaacga aatggcaagg tttcctttgc cgtccgttat gtacgtttcg taacattcga
     8101 agacttcctg aaccctgccc gccgtttcgg tttctgtgcc ccccccctgt tagataaggg
     8161 ggggggaaga ttcgaagcgg ttgccggctt cctgccgtcc gccggcgcct ccgtcatcac
     8221 gccggcaacc tcctttgtca tcccttgctt atctcccatg tgcgaatcct caaaaacggg
     8281 caaaaaaaag ccctgttact tgtagaaagt aaagggcgtt aatttttgtt aatcgcccct
     8341 tcttagggac gcaatatata aggtttatac ggttactgta ccgaatactc aaaccgctac
     8401 tttatttcct attatccgtg aacaagtgaa acctgacagt attgtttata cggattgtta
     8461 tcgtagctat gatgtattag atgtgagcga atttagccat tttagcttcg ctgaaacttc
     8521 gttttcgtat caatcacagc acacattttg ccgaacgaca aaaccatatt aatggaattg
     8581 ggaacttttg gaaccgggca aaacgtcatt tacgcaagtt tgacggcatt cccaaagcgc
     8641 attttgagct gtatttaaag gagtgcgaac ggcgttttaa caacagtgag ataaaagttc
     8701 ttgttccatt t
//
LOCUS       DAXGCP010000086         8697 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.086, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000086 DAXGCP010000000
VERSION     DAXGCP010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8697)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8697)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8697
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.086"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(115..414)
                     /locus_tag="ACFJCW_001781"
     CDS             complement(115..414)
                     /locus_tag="ACFJCW_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151859.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERYGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFILARQGHGVVVAMQ"
     gene            complement(414..1715)
                     /gene="nuoF"
                     /locus_tag="ACFJCW_001782"
     CDS             complement(414..1715)
                     /gene="nuoF"
                     /locus_tag="ACFJCW_001782"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HFC4151860.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVPFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVRRIVEGKGRMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFAHYIEHGGPMKEHKWGGW"
     gene            complement(2105..2578)
                     /gene="nuoE"
                     /locus_tag="ACFJCW_001783"
     CDS             complement(2105..2578)
                     /gene="nuoE"
                     /locus_tag="ACFJCW_001783"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HFC4151861.1"
                     /translation="MLSAKSLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGITPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGIGYGETTPDGKFTLVEGECMGACGDAPVMLVNNHSMCSFMTEEAIEKKLAELE"
     gene            complement(2578..3834)
                     /gene="nuoD"
                     /locus_tag="ACFJCW_001784"
     CDS             complement(2578..3834)
                     /gene="nuoD"
                     /locus_tag="ACFJCW_001784"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HFC4151862.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPGFMPKYESSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCADWLRVNPGPVITANHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            complement(3824..4417)
                     /locus_tag="ACFJCW_001785"
     CDS             complement(3824..4417)
                     /locus_tag="ACFJCW_001785"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HFC4151863.1"
                     /translation="MASIQNLYETVVGVLGDQAGKVISALGEITVECLPEHYISVMTA
                     LHDHEDLHFELLVDLCGVDYSTYKNEAWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVADIYNSADWYEREAFDLYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            complement(4430..4912)
                     /locus_tag="ACFJCW_001786"
     CDS             complement(4430..4912)
                     /locus_tag="ACFJCW_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HFC4151864.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            complement(4903..5259)
                     /locus_tag="ACFJCW_001787"
     CDS             complement(4903..5259)
                     /locus_tag="ACFJCW_001787"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HFC4151865.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            complement(5768..7219)
                     /locus_tag="ACFJCW_001788"
     CDS             complement(5768..7219)
                     /locus_tag="ACFJCW_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine synthase"
                     /protein_id="HFC4151866.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTPFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIAGRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDIFNSVNGIERAYLPPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNSTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIRMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            complement(7242..7862)
                     /locus_tag="ACFJCW_001789"
     CDS             complement(7242..7862)
                     /locus_tag="ACFJCW_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HFC4151867.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSKGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACLNLLIAASVWLRYRKDGYGEH"
     gene            complement(8061..8437)
                     /locus_tag="ACFJCW_001790"
                     /pseudo
     CDS             complement(8061..8437)
                     /locus_tag="ACFJCW_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         2288 a         2171 c         2139 g         2099 t
ORIGIN      
        1 taaatgactt aaataactct ttaacagcac gctcattgtc ttcatctgta ggctcaaact
       61 tttcacacca attaattata tttacatcgc catgcaataa ctctgcataa catcctactg
      121 catcgcaact accaccccgt gtccttgacg tgccaaaata aaatcacaat tatgcgaata
      181 aagtttgtat aaatttctcc taacctcgta ttcattatca ccagatgaat aaaaaccaat
      241 cctctgacct tcatgatcaa atactgcaac aaaatctaag ccgtttccat atctttcaaa
      301 aaagactaga aatttagaaa atttccgaca aatctgatta aaaagcgtat tgagtgtcgt
      361 actcttacct ttgttggctg caccgtatag aataaaaatt ttagcttcca ccattaccac
      421 cctccccact tatgctcttt catcggcccg ccgtgttcga tgtaatgcgc aaactcatca
      481 cggaaatgct tggtaaagct gcggacaggg aagacagcgg catcggcaag ggcgcagatg
      541 gtgcggcctg ccatttggtt gccgacagaa tccagcaaat ccaagtcttc catgcggcct
      601 ttgccttcta cgatgcggcg gacgatgcgg taaagccagc cggtaccttc gcggcagggg
      661 gtgcattggc cgcaggattc gtcgtagtag aaatagctta agcgttcgag ggctttgacc
      721 atgcacacgt cttcgtccat cacgataatc gcgccggaac cgagcatcga gccggctttg
      781 gaaatcgagt catagtccat attggtctgc atcataatgt cggcaggcaa tacgggggcg
      841 gacgaaccgc cgggaataac ggctttgagt tttttaccgc cgcgcatacc gcccgccatt
      901 ttcaagactt cggcaaacgg cgtgcccaac ggcacttcat agttgcccgg acgctcgaca
      961 tggccggaaa tacaaaataa tttggtaccg cctgcattcg gaataccttt atcggcaaac
     1021 gcctgtccgc cgtcacggat aataaacggg acggaggaga acgtttcggt attgttgatg
     1081 gtggtcggtt tgccgtacag gccgaacgag gcggggaacg gcggtttgaa gcgcggctgg
     1141 ccttttttgc cttccaacga ttcaagcaat gcggtttctt cgccgcaaat atatgcgccg
     1201 tagccgtggt gggcgaagag ttcgaattca aaatccgaac ccaaaatatt tttacccaaa
     1261 aagcctgcgg cacgcgcctg ctccaaagcg gcttcaaagc gttgataacc ttcgaaaatt
     1321 tcgccgtgga tatagttgta gccggctttc gcgcccatcg cgtaaccggc aatgatcatg
     1381 ccttcaatca gggcatgagg attgaacatg atgatgtcgc ggtctttaaa tgtacccggc
     1441 tcgccttcgt cggtgttgca aaccacatat ttttcgcccg ggaaagaacg gggcataaag
     1501 ctccatttca aaccggtcgg gaagcccgca ccgccgcgcc cgcgcaagcc ggaggttttg
     1561 acttcgtcaa tcacatcggt ttgcgagatg ttttcggaca ggattttacg cagggcggta
     1621 tagccgccgc gtttgacgta ttcgtccaat gtccagcaat cgggattggc ggtatccact
     1681 tggtcaaaaa tcacgcctga ttggtaaata gccatttttg gtgtgcctgt ttgttttcgt
     1741 atcggttgcg gccgctgttt cagacgacct taaaatgtct ttgtgtatcg gcttgtaacg
     1801 tcttctgaaa taaaatctag tttatcaaat cgatattttc agacgacctt caatcgtttt
     1861 tgttggatct cgaccacttg cttgtctgcc gtcattcccg cgcaggcggg aatccatcct
     1921 caatggtaag caatgtctta ttaaattcag aaaccgaatc ttaccggtgg attcccgcct
     1981 gcgcgggaat gacggcattt cagtatttca gtagggcgga ttcttaaatc cgacattttg
     2041 cctttttacc cactctgtcg gatacaagta tccgacctac gtttaaatcg tcgtttcaga
     2101 cgacctactc caactccgcc agtttcttct caatcgcctc ttcggtcata aagctgcaca
     2161 tgctgtggtt gttgaccagc ataacggggg catcgccgca cgcgcccatg cattcgcctt
     2221 cgacaagggt aaatttgccg tcgggcgtgg tttcgccgta gccgataccg agtttttgtt
     2281 tgaggtattc gccggtcgcc ataccgccgc gcagagcgca gggcaggttg gtacaaacgg
     2341 tcagtttgta tttgccgaca ggctcaaggt cgtacatatt gtagaaagtg gcgacttcat
     2401 atgcctgcgc cggcgtgatg ccgatgtagt cggcaacaaa agcgatggtt tcgggggcga
     2461 gccagccttt ttcggtttgg gcgatacgca acgcgcccat gatggcggaa cggcgttggt
     2521 cggcgggata tttcgccaac tcaatgtcga tttgttttaa ggattttgcg gataacatta
     2581 tcggtcaacc tccccgaata cgatgtcctg cgtaccgatg atggcaacga cgtcggcgag
     2641 catatggcct tttgccattt cgtccatgcc ttgcaggtgg gcgaagccgg gtgcgcggat
     2701 tttcaggcgg tagggtttgt ttgcgccgtc tgaaatgatg taaacgccga actcgccttt
     2761 cgggtgttcg acagcggtgt aggtctcgcc ctcgggaacg tgcataccct cggtaaagag
     2821 tttgaaatgg tgaatcaggt cttccatacc tgttttcatt tcggtacgtt tgggcggagc
     2881 gaatttgtgg tttgcggtaa tgaccgggcc gggattgacg cgcaaccagt cggcgcattg
     2941 tttgatgatg cgtacggatt ggcgcatttc ttccatacgg cagaggtaac ggtcgtagca
     3001 gtcgccgttg acgccgacgg ggatgtcgaa atccattttg tcgtacactt cgtagggctg
     3061 tgtcttacgc acgtcccatt ccacgccgga accgcgaagc atcacaccgg taaagccttt
     3121 ttgcatggcg cgctcgggag agacaacgcc gatgccgacg gtacgctgtt tccagatgcg
     3181 gttgtcggtc aggagggttt cgagtgtgtc gatatttttg gggaagcgtt cgcagaaggc
     3241 atcgataaag tcaagcatcg tgccttcgcg ggattcgttg agctgcttca atactttggc
     3301 attgcggaat ttgctgctct cgtatttggg cataaagccg ggtaggtcgc ggtaaacgcc
     3361 gccgggacgg aagtaggcgg cgtgcatacg tgcgccggac acggcttcgt acaagtccat
     3421 cagctcttcg cggtcgcgga aggcgtagag gatggcggtc atcgcgccga tgtcgaaggc
     3481 gtgcgaaccg atgcccatca agtgattgag gatgcgcgtt acttcggcga acatcacgcg
     3541 gatgtattgg gcgcggatag gcacatcgat accggcaagt ttttctaccg ccaagcaata
     3601 cgcctgctcg ttgaccatca tggaaacgta gtccaaacgg tccatatagg gcagggcttg
     3661 cagataggtt ttggtttccg ccagtttttc ggtgccccgg tgcaggaggc cgatatgcgg
     3721 atcggcacgg acgatttgtt cgccgtccag ctccaaaatc atacgcaata cgccatgcgc
     3781 cgcagggtgc tgcgggccga agttgatggt gtagtttctt aatttattgg ccaccgtagt
     3841 tctcctcacg gacgatacgc ggtgtgattt cgcgcggctc aatggtaaca ggttggtaaa
     3901 tcacgcgttt ttgctcttcg tcataacgca tttccacata gccggaaatc gggaagtctt
     3961 tgcggaacgg atgtccgaca aagccgtaat cggtcaggat gcggcgcaag tcgggatggt
     4021 tgttgaacat gatgccgtac aaatcgaagg cttcgcgctc gtaccaatcc gcgctgttgt
     4081 aaatatcggc tacggattcg actacaggga agtcgtcgtc tgaaacccag acgcgtacgc
     4141 ggatgcgttg attgttttta acggaaagca actgactgac aacggcaaag cgtttgccct
     4201 gccatgcttc gtttttgtaa gtgctgtaat cgacgccgca caagtcaacc agaagctcga
     4261 aatgcaaatc ttcatggtcg tgcaatgcgg tcatgactga aatatagtgc tcgggcagac
     4321 actcgacggt aatctcgccc aaagctgaaa tgactttgcc tgcctgatcg ccaagcacgc
     4381 cgacgacggt ctcgtataag ttttgaatgc ttgccatatc gtcctctcct tactcgtcac
     4441 gcgcgatggt ggaagtgcgc ttgatttttt gttggagctg aatcaggccg taaatcagag
     4501 cttccgcagt cggcggacaa cccggcacat aaacgtccac cggcacgaca cggtcggcac
     4561 cgcgcacaac ggaataagaa tagtgataat agccgccgcc gttggcacac gaacccatag
     4621 acaataccca gcgcggctcg gcgagctggt cgtacacgcg acgcagggct ggcgccattt
     4681 tattggtcag cgtacctgcc acaatcatca ggtcggcctg acgtggggac ggacggaaaa
     4741 tgataccgaa acggtcaagg tcataacgcg ccatacccgc atgcatcatt tccacggcgc
     4801 agcaggccaa tccgaaagta accggccaca atgaaccggt acgcatatag ttcaacaccg
     4861 tatccgcgct ggtggtgatg aaaccttttt tcaaaacgcc ttctattccc attccagcgc
     4921 accttttttc cattcgtaaa caaagcctac cgtcaggacg acgataaaca ccagcataga
     4981 ccaaaagccg tacgcgccca aatctttgaa cacgactgcc cacggcagca taaacgcaac
     5041 ctccaaatcg aagaggatga acaggatggc gacgaggtaa tagcgcacgt cgaacttcat
     5101 ccttgcgttt tcaaaggctt caaaaccgca ttcgtaaggc gcgtcttttt cggcatagtg
     5161 gcgtttcggg cccaaaatcg tgccgagcag gataaacagt acgccggccg cgaggccgac
     5221 gaggataaag acaaagacgg gaaagtaagc ggacaacatg gttacaccca aatccgttaa
     5281 caaaatttct acaataattt cgtattttag cgaatttcaa aaaccattaa aaggtaaata
     5341 tcggcaaaac gcccaaaaaa acccaataaa tacaatcatg ttatgataac gattcttatt
     5401 tgattttata aggtcatata aatttttaca ccgtaattcg tggtatagcg gattaacaaa
     5461 aaccggtacg gcgttgcccc gccttagctc aaggggaacg attccctaag gtgcccaagc
     5521 accaagcgaa ccggttccgt actatttgta ctgcctgcgg cccgccgcct tgtcctgatt
     5581 tttgttaatc cgctatatat aggaataaga attcgggaca aaatgtttaa accattttgt
     5641 cccgactgct gtgatgcggt ttttttgaac taacaggacg ttacctaaaa cctgcgttac
     5701 ctaaaacctg cgttacctaa aacctgcgtt gcctaaaacc tgcgttgcct aaaacccttt
     5761 aagacggtta aatccctctg ccgtatttgt attctacaat catattatcg tcagtaatga
     5821 cttccgcccc agccgaaggt tccgtcatcc gaatcagcat acgagagaca accttttgtg
     5881 ctgcagcatc cacggtgctg ctgtcaaata cgtgcctgcc gctttccggc caaatcaacc
     5941 gggaaaggcg ttgcttgagc agttctttat tagggaaaac taccggggtt gccgagccga
     6001 ctaccatatg cccgtagcgg tatgcatagg gaatactgtg tacggcggta gcaaaagcat
     6061 gcgggctgtg cgtggtatta aacattacaa taccatccgg ggtaaggtgg ctttgcacct
     6121 gttttaaaaa ttccgcactc aacaggttag tggaataggc acgccagtac caagtcgaat
     6181 tcatcaaaat caggtcgaat ttttcatcag gatggcgacg cagccatttc ctaccgtcat
     6241 ccaatacaat ttcaacacgt ttgtcctgca aaagcggtgc gatttgcggc tcgtccgcga
     6301 taaggctacg gtatgccgga ttgatttccg caacgatcat cgactgcatt tccggaatgg
     6361 cagacaagac gcgcgcccac gaacctgtac tcaatccaac gacgaaaatg cggcgtatgc
     6421 cggacttcag ggagggtggc agataggcac gttcgatgcc gttgacacta ttgaatatat
     6481 cggtattgta tgcgccgtcg tatacattcg ccccataaac aaccttatca ccatctctat
     6541 ggtaaaccgc aacaatgccg tgtttgtttt caatcaacct atccggacgg ccagcaatat
     6601 tttgaaagac ggaatccggc agtaggaaca tgaggatgcc gaacattagg gaaactgcta
     6661 ccgacactgc attcagtcgg agactttttt ggaacggtgt acaaaacaaa gggacagcag
     6721 cagaaatcaa acagatgagc aggtaaatct gttgggtgga caagaaatca agtatcacaa
     6781 agccgataag gaccggaccc aatgcactgc cggcaacgtt ggcgaaataa acattggaaa
     6841 cctgtcgtcc ggatttgttg ccatccgtac ccacatggtg tacaagtggg aaaatcaacc
     6901 ccctgacgac ggcagacagg gtaatgaaga taccggcgtg gtggacgaag ccggaaaaac
     6961 ccgtcaacaa ccacgcagca cccaaaatca aaaaatcggc aatacccgcc cacaagaagc
     7021 actgcccgat aaagggaata tcaacaaagc ggctgcggca aatccgtttg ccaaaatacg
     7081 cgccgacggc gataccggtc agaaaacagg caagagtaaa tgaaaatgcc tgaggcacgg
     7141 actgtgctgc gaacgaaaac atccttaccc acaagacttc tatacccaag ctcaataatc
     7201 cgctaaggaa agaaagcata taaatcaaac tagtattcgg tttagtgttc accatatcca
     7261 tcctttctgt aacgcagcca tactgaagca gcaatcagaa ggttaaggca ggctgtcagc
     7321 gcaatggttt gggagagggt aaaaaagacg tagaaaaatt cggcggcggc aagcgatccg
     7381 agtgccgcac ccaaagtgtt gaaaaaatat aaggtaccga tagactcgcc aacattatgt
     7441 attttccggt taaaaaaaca ggtcagcaag ggcaaggtcg cgcccatcat aaaggtagga
     7501 agcagcaata agaggaaatt ggcagcagcg atgatgggca aatcagcctc aactaaaaga
     7561 tgccccaagc cggaaatcag acccttgctt accaaaccga acagaccgat ggatacttca
     7621 gcgatgcaaa acagggggat gatacttgaa ggaaaacggt cagcaatgcg tccgccgaaa
     7681 tacgcaccta cacccaagcc gaccataaat acagaaataa tgacagtaat cgaactcaaa
     7741 tcgataccta tgtggctgaa tagaagcctc tgccagctga cctggtaaat cagggcgcag
     7801 aagccagagg cgaaaaacac cagcgacaat cctttcaggg ttttacttgc ggtcgaattc
     7861 atattttcta ttttcaaata ggcggaacta taaatgaaat gtattaatgt gtaaacattt
     7921 gtattagccg taggaaatca ccgcattgct caaactgcag gccgggaaaa taaactcgta
     7981 agcccgcaaa cggcgtatca ctgttcaaac tgctgtgcgg cttcatgacg ttataaaaat
     8041 taaggggctg tcctggacaa ctaggataaa ctcgatttta ctaattgttt taaaatggaa
     8101 caagaacttt tatctcactg ttgttaaaac gccgttcgca ctcctttaaa tacggctcaa
     8161 aatgctcttt gggaatgccg tcaaacttgc gtaaatgacg ttttgcccgg ttccaaaagt
     8221 tcccaattcc attaatatgg ttttgtcgtt cggcaaaatg tgtgctgtga ttgatacgga
     8281 aatggctaaa ttcgcccgca tccaatacat catagcgacg ataacaatcc gtataaacaa
     8341 tgctgtcagg ctctgttgct gttcttgcag ttacgcctgc gacaaacagt tcaatgagtt
     8401 tattttgttt ataccggctt agacggcttt ttctcatagg gataattcta acttaatttg
     8461 aatttcccta gttatctagg acagccccaa gaataataat cattccggat attcagtgat
     8521 aacagacacc gggtgttcat accctgtttt taccgtccgt cattcccacg aaagtgggga
     8581 tccaggacga aaaatctcaa gaaaccgttt tacccgataa atttccgcac cgacagacct
     8641 agattcccgc ctgcgcggga atgacggttc gggtatttct gacgattcat cgagccg
//
LOCUS       DAXGCP010000087         8371 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.087, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000087 DAXGCP010000000
VERSION     DAXGCP010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8371
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.087"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..198
                     /locus_tag="ACFJCW_001791"
                     /pseudo
     CDS             1..198
                     /locus_tag="ACFJCW_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749744.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF1275 family protein"
     gene            346..571
                     /locus_tag="ACFJCW_001792"
                     /pseudo
     CDS             346..571
                     /locus_tag="ACFJCW_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749744.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
     gene            681..1358
                     /locus_tag="ACFJCW_001793"
     CDS             681..1358
                     /locus_tag="ACFJCW_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HFC4151868.1"
                     /translation="MTFFKPFTVVLTASALALSGCVADPVTGQQSPNKSAMYGLGGAA
                     VCGIVGALTHSGKGARNSALACGAIGAGVGGYMDYQEQRLRQNLAGTQIEIQRQGNQI
                     RLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNPL
                     SQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILINPDQRA
                     VNAARHM"
     gene            complement(1632..2402)
                     /gene="xth"
                     /locus_tag="ACFJCW_001794"
     CDS             complement(1632..2402)
                     /gene="xth"
                     /locus_tag="ACFJCW_001794"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HFC4151869.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPE
                     KWYEKIHCSSVERQWFQNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVTSEMAAVLKDVRIDLETRALERPSDHAPVAAEFDL"
     gene            complement(2462..2743)
                     /locus_tag="ACFJCW_001795"
     CDS             complement(2462..2743)
                     /locus_tag="ACFJCW_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HFC4151870.1"
                     /translation="MNTIPLHTILKLMAHPERMAILIQLLDSERNIVELAKSLSLTAT
                     AVSCHLNRLRAGGLVDFTRYHRIIEYRLVSEDAATILRTIRDLENKRAA"
     gene            2996..3247
                     /locus_tag="ACFJCW_001796"
     CDS             2996..3247
                     /locus_tag="ACFJCW_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151871.1"
                     /translation="MDIFRESRPFCATGCPTPTSGSAFHHRRRRYGQDRIGRAFLTMH
                     RILDKENQIHTDMALALPAVVKDAVAIWADMDTLDRCSG"
     gene            complement(3310..3450)
                     /locus_tag="ACFJCW_001797"
     CDS             complement(3310..3450)
                     /locus_tag="ACFJCW_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151872.1"
                     /translation="MSGKEPLNRNPVIASGRECRLKYSSDGIFREGRDALEKTAFQAG
                     AI"
     gene            complement(3478..4359)
                     /gene="nadC"
                     /locus_tag="ACFJCW_001798"
     CDS             complement(3478..4359)
                     /gene="nadC"
                     /locus_tag="ACFJCW_001798"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HFC4151873.1"
                     /translation="MPSENPLFALPDTLLRPMVEQALSEDLGRRGDITSAAVIAPDKT
                     AKLFLISRENGVIAGMDLARLAFQTMDPCVRFQAEIHDGQAVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     ANHRIGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTVHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFVA"
     gene            complement(4435..5373)
                     /locus_tag="ACFJCW_001799"
     CDS             complement(4435..5373)
                     /locus_tag="ACFJCW_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151874.1"
                     /translation="MDAYPEAEAPLQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQKRLKHIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIAEAAEPQANFDFALTGQTMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPGFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLYRFRDNVLSDRLISDIGLPLGSR"
     gene            5575..6687
                     /gene="nadA"
                     /locus_tag="ACFJCW_001800"
     CDS             5575..6687
                     /gene="nadA"
                     /locus_tag="ACFJCW_001800"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HFC4151875.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDHETAGRL
                     KDEIKVLLKRKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVAVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKHALTGGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            6739..8247
                     /gene="nadB"
                     /locus_tag="ACFJCW_001801"
     CDS             6739..8247
                     /gene="nadB"
                     /locus_tag="ACFJCW_001801"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HFC4151876.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIGKHVADTLEAGAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLIIQIRRRPNIRVYERQMALDVQTES
                     GAACGLTVLDCRTQETYRIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     IENLEFIQFHPTGLARPSENGRTFLISEAVRGEGGILTNQSGERFMPHYDRRAELAPR
                     DIVARAIAAETAKQTQDFVSLDISRQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPSGRTSLPQLYALGETACTGLHGANRLASNSLLECVVTARLAAQG
                     IADGQAFQIEPFQRPSESPSAETDIFSNDLQNTFSRPVLQTFNQRHLGILRNDTDLHR
                     AIDQLRLWKQNQAEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
BASE COUNT         1808 a         2453 c         2358 g         1752 t
ORIGIN      
        1 tcattcccgc gctgcaatgg gacatcggcg gcagcggggc ggttttccct tcgctcgcac
       61 tgtttctgct ctgtttcatc ataggtatgc acaacacggg gatgacgctt ctgccgggcg
      121 gtgcaatccg ttcgacgcac atggcccggc acggcagccg acttgggcat cgaaatcccg
      181 cgcgtgccgt actatagtgg attaacaaaa accagtacgg cgttggcccg ccttagctca
      241 aagagaacga ttctctaagg tgctgaagca ccaagtgaat cggttccgta ctatctgtac
      301 tgtctgcggc ttcgccgcct tgtcctgatt tttgttaatc cactatattc ctaaacccac
      361 catccgcgcc tgccgcacgt acacgtcgac aaaccgaaaa tatggctgct cggcggcatc
      421 gtcggcgcgt ggggctgcca taaaatcgga caccatttct ccctgcccgt ttcggcagta
      481 ttgccgatac cgggtgcagg ctcggtcggc tacgatgtga aggtacgttt ttttgcggat
      541 gtggctgcgg tttcggcgca aatcacgata aacccgcgtt gtttcgggaa aaatcgggta
      601 atttcaggtt aattgcactt tttcagacgg catgattgct tatagttgta cggtttgaca
      661 tatgcacgga aggaaacgcc atgactttct tcaaaccctt taccgtcgtg ctgaccgcat
      721 ccgcactcgc gctttccggc tgcgttgccg accccgtaac cggacagcag tccccaaaca
      781 aatccgccat gtacggtttg ggtggcgcgg cagtgtgcgg catcgtcggc gcactgaccc
      841 acagcggcaa aggcgcacgc aattccgcgc ttgcctgcgg cgcaatcggc gcaggcgtgg
      901 gcggctatat ggactaccaa gagcagcgtt tgcgccaaaa ccttgccggc acgcaaatcg
      961 aaatccaacg ccaaggcaac caaatcaggc tggtgatgcc cgaaagcgtt accttcgcca
     1021 ccggcagcgc ggcgttgggc ggcagtgcgc aatacgccct gaacactgcc gcacagacgc
     1081 tggtgcagta tcccgacacg acgctgacca tcaacgggca caccgacaac acaggttccg
     1141 atgcagtcaa caatccgctt tcgcaacacc gcgcccaagc ggttgcctac tatctgcaga
     1201 cgcgcggcgt ggcggcttcg cgcctgacgg tttacggcta cggttcgcat atgccggtcg
     1261 cgtccaacgc tacggttgaa ggccgcgcgc aaaaccgccg cgtcgaaatc ctcatcaacc
     1321 ccgaccaacg cgccgtcaac gccgcacggc acatgtaacg cgccctgcaa cgccaatgcc
     1381 gtctgaatgt ttttcagacg gcatttccgt attcgcaagc acagccgtac cccgactgta
     1441 atgctatgga taacgtctcg ccgtttgccg ggaaaccgca gattgcagcc ggtggcgtgc
     1501 aagtgggccc aaccttgcag acgttaccgc cataccgcga tacccctgta acctcatcgt
     1561 ttaaacagat attcaatcaa aatgccgtct gaaaccctgc gaagtttcag acggcatttg
     1621 cctttcccga attacaaatc aaattctgcc gccacgggcg cgtggtcgct cggacgctcc
     1681 agcgcgcgcg tctccaaatc gatgcggaca tccttcaaaa cggccgccat ttcggatgta
     1741 accaatatat ggtcgatacg caggcccagt ttgcgttgga acatcgcgcc gcgatagtcg
     1801 aaccaggtat agaacgcgcc ttcggggtgg acttggcgca ggctgtcggt caatcccaaa
     1861 tccagcagat tttgaaacca ctgccgttcg acggacgaac agtggatttt ttcataccat
     1921 ttttcagggt cgtaacagtc cgcatcggca ggcgcgatat tgaaatcgcc cagcagcacc
     1981 agtttgccgt ggcgggtcat ttcgtcgcgg acaaactccg tcagtgcggc aaaccactgt
     2041 tccttatatt tgaatttggg gctgtccaaa gcctcgccgt tgacgcaata gacattgatg
     2101 acgcgcacgc cgcctacggt cgccgcaatc acgcggcgtt gcgggtcatc cggcagggaa
     2161 ggcaaaccga aatgcacgtc ctgcggcacg ctgcggctga tgatcgccac gccgttgtag
     2221 gttttctgcc cgctccaaac acagtgccag cccatcatct gcaaggcggc ggccggaaat
     2281 ttgtcctgat cgagtttgag ttcctgcaaa accaaaatat cgggcggatt gtcggcaagc
     2341 aggttttgca cctgcggcag ccgcacattg agcgaattga cgttccaagt ggtgattttc
     2401 ataacatttc cgaaaaatgc cgtctgaaac gttcagacgg caaaagaaaa ggattctaac
     2461 actatgccgc gcgtttgttt tccaaatcgc ggattgtccg cagaatcgtt gccgcgtctt
     2521 cggaaaccag gcggtattcg ataatgcggt ggtaacgcgt aaagtccacc agaccgcccg
     2581 ccctcaggcg gttcaaatga caggaaaccg cggtggccgt cagggataag gattttgcca
     2641 gttcgacgat attgcgttcg ctgtccaaca gttggatcag tatcgccata cgttcgggat
     2701 gcgccataag tttgagtatg gtgtggagcg gtattgtgtt catcggtatt cctaaaacct
     2761 tttccgcccg ccaagcggat tgacgggcgg cagatatgga tgattttgat tatctttata
     2821 aattgtatta taaatcaatt gtttatttct cattgtacag gattgtatgt tccttttccc
     2881 actatttttg caaacaagcg taaagacagg ctttcagacg gcataaaact gccgccccta
     2941 ccctgcctca ccctgttgcc gaacggaatc atccgtattt tttaagaaaa ccattatgga
     3001 tattttccgt gaatcaaggc cgttctgcgc gacaggctgt ccaacgccaa catccggttc
     3061 ggcatttcat catcgccgcc gacgatacgg gcaagaccgc atcggtcgtg ccttcctaac
     3121 gatgcaccgc atcctcgaca aggaaaacca gatacatacc gatatggctt tagcgttgcc
     3181 ggcggtagtg aaagacgcag tggcgatatg ggcagatatg gatacattgg ataggtgttc
     3241 cggctgaccg ctccgttact gccgtatctt tcggctaccg ttcatcaaat ggttccaatg
     3301 ccgaaatgcc taaatcgcgc ctgcctgaaa tgctgttttt tctaaagcat cacgaccttc
     3361 acgaaaaatg ccgtctgaag aatatttcag acggcattcc ctccctgagg caataaccgg
     3421 attacggtta agcggttcct tgcctgacat atcagacagc cgcccgcacc ctgaaactca
     3481 cgccacgaaa tccaaaccta tgtccaacga tcggctgctg tgggtcagat agccgagggc
     3541 gatgccgtcc acgccggttt gcgccacgcg cttcaggcgg tcgaagccga tgccgcccga
     3601 tgcttcgcaa tagacggtgt gtgggtggac ggtttgtgtg tggcagcggt ttgccgcttc
     3661 tttcagggtt tcgtcgtcca tgttgtccag caaaatccgt tccgcgcccg ctgcgatggc
     3721 ttcgtccagt tgtgccaatg tgtccacttc gatttccacg caggtcaatg gtccgactgc
     3781 ctgttttgcc tgccgaacgg cttgggcgat gctgccgcaa taggcgaggt ggttgtcttt
     3841 gatgagcacg gcgtcgtcca aaccgatgcg gtggttcgcg ccgccgcccg ccctgacggc
     3901 gtatttttgc aggacgcgca gcagggggat ggttttgcgg ctgcacacga tgtctgtacc
     3961 gtattcggcg acctcggcaa cggcacgagc ggtggcggtg gcgatgccgc tcaagtgtgt
     4021 gaggtagttg agcgcggtgc gttcggcggc gagcagcgcg cgggcgttgc cttcgacggc
     4081 agccagtgtc tgacctgcgc ggacggcttg tccgtcgtgg atttcggctt ggaagcggac
     4141 gcacggatcc atcgtctgaa aggcgaggcg cgccaagtcc atgcctgcga tgacgccgtt
     4201 ttcgcggctg atcaggaaaa gtttggcggt tttgtcgggc gcgatgacgg cggcggacgt
     4261 aatgtcgccg cgcctgccca agtcttcgct caaggcttgt tccaccatgg ggcgcaacag
     4321 ggtgtcgggc agggcaaaga gggggttttc agacggcatg gggtttcctt tgttaaaaaa
     4381 gattgatgtt gcaccgatgg ggcaaaactt catttgatgc cgtctgaaaa cgggctaacg
     4441 gctgcccagc ggcagtccga tgtccgaaat cagcctgtcg gacaggacgt tgtcgcggaa
     4501 gcggtaaagc tgcgcgggac ggcctttgct gcccgatacg ccggtatccg acggctcgat
     4561 aaggttttgc tgctgaatct ggcggcggaa gttttgcttg tgcagcaatc tgccgctgat
     4621 ggcttcgacg ctgttttgca gttgcagcag tgtaaatccg ggcggcatca gttcaaaaat
     4681 cacggggcgg tatttgattt tggcgcgcag gcgggacagg gcggtcgcca acacgcggcg
     4741 gtggtcgtgg cgcatggtct gccccgtgag cgcgaagtcg aagtttgcct gcggctcggc
     4801 ggcctccgct atcagaccgc tttcatacaa catttcatag cgttgcaaaa cgtattcttc
     4861 cgaccagttt tccggttcga ccccccaaca caaatgaata tgcttgagcc gcttttggcg
     4921 gacttcctcc gtgtccgccg agtttgccca aatgcgcagg cggctgacga cggcgtcgcg
     4981 ctgcccgccg tcggtgcgca agtcttccca tgggaaatag ccgtagcagt cctgccattt
     5041 cgcgtcggga tgcaggatgc tatcggctgc ctcgcgcacc agccccaaat agctgacgta
     5101 cagcacgggc atgccgtgtt cgttgcggcg gtgggtatcg acaaaggtgt aaagctgttc
     5161 cacatagccc ataggctgcg aagtctgctt ggcgacccac agctttacgc ccgcctgcag
     5221 ggaattgcgc aggggggaaa gcgggccgtt gggcaggagc gtgccttggg cgacggtcaa
     5281 cacccgcagg ccgccgtcgg taacggcaat caatacggga accagctcga cgatgctttg
     5341 cagcggagct tcggcttcgg ggtaggcgtc catgctcggc tttctgcggg tgggaaaggc
     5401 tttattgtaa accaaagcgg tttgtcggaa cgaagcgggt cggttttgcg gtatcgcaaa
     5461 cctgttttca gacgaccttg catattatac tcaagttgag cataatgtaa aaacagtttg
     5521 aaaaacagac ggcaaacctt catgccgtct gaaaaccagc tacaaggaaa catcatgcaa
     5581 accgccgccc gccgctcgtt cgattacgat atgcccctca tccaaacgcc gacttccgcc
     5641 tgccaaatcc gtcaggcgtg ggcgaaggtt gccgacacgc ccgaccacga gacggcaggt
     5701 cgtctgaaag acgaaatcaa ggtcttgctg aagcggaaaa acgcggtctt ggtggcgcat
     5761 tattacgtcg atccgctgat tcaggatttg gctttggaga cgggcggatg cgtgggcgat
     5821 tcgctggaaa tggcgcgctt cggcgcggaa cacgaagccg gtacgctggt ggtggcgggc
     5881 gtgcgtttca tgggcgagag cgcgaaaatc ctctgccctg aaaaaacggt gctgatgcct
     5941 gatttggaag cggaatgttc tttggatttg ggttgtcccg aagaagcgtt ttcagcgttt
     6001 tgcgaccaac accccgaccg cacggtggcg gtgtacgcca atacttccgc agccgtgaaa
     6061 gcgcgtgccg actgggtggt aacgtcttcg gtggcgttgg aaatcgtgtc gtatctgaaa
     6121 tcgcgcggcg agaaactgat ttgggggccc gaccgccatc tcggcgacta catccgccgc
     6181 gaaacgggcg cggatatgct gttgtggcag ggttcgtgca tcgtccataa cgaattcaaa
     6241 gggcaggaac tggcggcgtt gaaggcagag catcccgatg ctgtggtgct ggttcatccc
     6301 gaatcgccgc aaagcgtcat cgaactgggc gacgtggtcg gctcgaccag caaactactc
     6361 aaagccgccg tatcgcgccc tgaaaaaaaa ttcatcgtgg caaccgattt gggcatcctg
     6421 cacgaaatgc aaaagcaggc gcccgacaaa gaatttatcg ccgcgccgac ggcgggcaac
     6481 ggcggaagct gtaaaagctg cgcgttctgc ccgtggatgg cgatgaattc gctgggcggc
     6541 atcaaacacg ccctgacagg cggacgcaac gaaatcctgt tggacagaaa gctgggcgaa
     6601 gccgccaaac tgcctttgca gcgtatgctc gacttcgcgg caggactcaa acgcggggat
     6661 gtgttcaacg gcatggggcc cgcctgattt gccgtccata tcgccgtttc agacgacctc
     6721 tcaaacaagg acaacaccat gcaaaccgat tgcgacgtat tgattgccgg aaacgggctg
     6781 gcggcactga cgctcgccct gtcgctgcct gaatcgttcc gcatcgtcat tttgtgcaaa
     6841 aaccggctgg acgacaccgc cagccgtcat gcgcaaggcg ggattgcggc ggcgtggtcg
     6901 ggagaggacg acatcggaaa acacgtcgcc gatactttgg aagcgggcgc aggtttgtgc
     6961 gacgaagccg ccgtccgcac catcctgtcg cagggcaaac cggcaatcga atggctgctg
     7021 gcgcagggcg tggcgttcga ccggaatcat aacgacctgc acctgacgcg cgaaggcggg
     7081 catacctgcc gccgaatcgc ccacgtcgcc gactacacgg gcgaagccgt catgcagagc
     7141 ctgattatcc aaatacgccg ccgaccgaac atccgcgttt acgagcggca gatggcgttg
     7201 gacgttcaaa ccgaatcagg cgcagcgtgc ggactgaccg tcctcgactg ccgaacgcaa
     7261 gaaacctacc gcatccgtgc ccgccatacc gtactcgcag gcggcggcct cgggcaaatt
     7321 tacgccgcca ccaccacgcc gcccgaatgc acgggcgacg ccatcgccat ggcgatacgc
     7381 gcgggttgcg caatcgaaaa cctcgaattt atccaattcc accccacagg cttggcaagg
     7441 ccgtctgaaa acggccgcac cttcctgatt tccgaagccg tgcgcggcga aggcggcatc
     7501 ctgaccaatc aatcgggcga acggtttatg ccgcattacg accgccgcgc cgaactcgcg
     7561 ccgcgcgaca tcgttgcccg cgccatcgcc gccgaaaccg ccaaacaaac gcaagacttc
     7621 gtctcgctcg acatcagccg ccaacccgca gcgttcgtcc gtcggcattt cccgtccatc
     7681 catcggcact gcctgtccca atgcggcttg gacatcacgc gccaagccat ccccgtccgc
     7741 cccgtgcaac actacacctg cggcggcatc caaaccgacc ccagcggcag aacctccctg
     7801 ccgcagctct acgccttagg cgaaaccgcc tgtaccggac tgcacggagc caaccgcctc
     7861 gccagcaact ccctgctcga atgcgtcgtt accgccaggc ttgccgccca aggcatcgcg
     7921 gacggacaag cgttccaaat cgaaccattc caaaggccgt ctgaaagccc ctccgccgaa
     7981 acagacatct tttcaaacga cctccaaaac acattcagcc gccctgtcct gcaaacgttc
     8041 aaccaacgcc atctcggcat cctccgcaac gataccgacc tgcaccgcgc catcgaccaa
     8101 ctgcggcttt ggaagcaaaa ccaagccgaa ccgcacaccg cgtccgaata cgaaaaccgc
     8161 aacctactcg aatgcagcct cgccgtcgcc caagccgcat acaggcggag acagaacatc
     8221 ggtgcgcatt ttaatagtga ttgttaaggt tggctggtta gaaaaaaatc gttcaaataa
     8281 atttgaatag catggttaag agattggcat tcagttttta tggttgcgta agttgggttg
     8341 aggcctttgc aaaaaagccc ttccttcgac a
//
LOCUS       DAXGCP010000088         8334 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.088, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000088 DAXGCP010000000
VERSION     DAXGCP010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8334)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8334)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8334
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.088"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..1007)
                     /locus_tag="ACFJCW_001802"
     CDS             complement(<1..1007)
                     /locus_tag="ACFJCW_001802"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease PLD domain-containing
                     protein"
                     /protein_id="HFC4151877.1"
                     /translation="MTQLFLHSDTPNEKELISIYEKAVSEAVELYIFSAYLTHWDVKN
                     KLNSKLQEFKFIFGQDFGLSKKEAIRKVLKWLPSHLKFTLMVAQGIQGFHPKAVFWKN
                     DKNEYYALIGSSNLTHAAFNSNYEANILTKISEQDFIKVKSWADEIAMKSIPVSEDWL
                     EEYQEAEINYKKSTVRQSVMDKLFMEMPNYNQELIAARRKQMRNHQTVCNQLKNLIKQ
                     CAAGKIDNNDFYGEFNKLWSWKSENKGEGVGNRFQDKTWKRTGKSSDFRKLCIAIQSV
                     FDAPLTERDNVVAKQIDWLKECGVSTRGSVFSEMLCQEYPDRYPVLNAPIKKFLEENK
                     F"
     gene            complement(1191..3215)
                     /gene="nuoL"
                     /locus_tag="ACFJCW_001803"
     CDS             complement(1191..3215)
                     /gene="nuoL"
                     /locus_tag="ACFJCW_001803"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HFC4151878.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPGATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAVKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHSDGHGEEHHGLGKNDNPHESPLVVTLPLILLAIPSVIIGYIAI
                     EPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLATAGVLSAWL
                     LYVKLPHLPAKIAQAFRPVYVLFENKYYLDALYFNVFAKGTRALGNFFWKVGDTAIID
                     NGIVNGSAKLVGAIAAQVRKVQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            complement(3218..3523)
                     /gene="nuoK"
                     /locus_tag="ACFJCW_001804"
     CDS             complement(3218..3523)
                     /gene="nuoK"
                     /locus_tag="ACFJCW_001804"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HFC4151879.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            complement(3520..4191)
                     /locus_tag="ACFJCW_001805"
     CDS             complement(3520..4191)
                     /locus_tag="ACFJCW_001805"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HFC4151880.1"
                     /translation="MTFSVILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     IWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVHRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKTE
                     GEGKA"
     gene            complement(4203..4682)
                     /gene="nuoI"
                     /locus_tag="ACFJCW_001806"
     CDS             complement(4203..4682)
                     /gene="nuoI"
                     /locus_tag="ACFJCW_001806"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HFC4151881.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            complement(4763..5839)
                     /gene="nuoH"
                     /locus_tag="ACFJCW_001807"
     CDS             complement(4763..5839)
                     /gene="nuoH"
                     /locus_tag="ACFJCW_001807"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HFC4151882.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPRGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGIVGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVVLGVWMISPLNLWK"
     gene            complement(5842..8103)
                     /gene="nuoG"
                     /locus_tag="ACFJCW_001808"
     CDS             complement(5842..8103)
                     /gene="nuoG"
                     /locus_tag="ACFJCW_001808"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HFC4151883.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVDVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEITMVNRGEHSEIMPFIGKAVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGVWANPMNTVEELYLAKKFAD
                     GLGVKNFATRLRQQDKRLSDGLKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLSQEAAHPDEWAGRLKNLSADAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQAANSVGADVLGVNSGESV
                     AEMANTPKQAVLLLNVEPEIDTVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPLWKVLRVLGNLFDLKGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWAGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQETSH
                     AAVPAARVNPNTLARLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMGTIELAGA"
BASE COUNT         2127 a         2183 c         2033 g         1991 t
ORIGIN      
        1 ttaaatttat tttcttctaa aaatttttta atgggagcat ttaaaacagg atatctatct
       61 ggatattctt gacaaagcat ttcagaaaaa actgaaccac gagtggaaac cccacattct
      121 tttagccaat caatttgctt ggcaaccaca ttatctctct cagtaagtgg agcatcaaaa
      181 actgattgga tggcaatgca taattttcta aaatctgaag acttacccgt ccttttccac
      241 gttttatctt gaaaacgatt gcctacccct tctcctttat tttcgctttt ccaagaccat
      301 aatttattaa attccccata aaaatcatta ttgtctattt ttcctgctgc acattgctta
      361 ataagatttt ttaattgatt acacacagtt tgatggtttc tcatctgctt tctccgtgcc
      421 gcaatcagtt cttgattata atttggcatc tccataaata acttatccat cactgattgt
      481 ctaacagttg atttcttata gttaatttca gcttcctgat actcctcaag ccaatcttcc
      541 gataccggga tagatttcat cgcaatttca tcagcccaag atttgacttt tataaaatcc
      601 tgctcggaaa ttttagtcaa aatatttgct tcataattgc tattaaacgc agcatgagtc
      661 aaatttgaag aaccgattaa agcataatat tcattcttat cattcttcca aaatacagct
      721 ttaggatgaa aaccctgaat gccttgagct accatcagtg tgaatttcaa atgggacgga
      781 agccatttca acactttccg aatagcctct tttttagaca atccgaaatc ttgtccaaaa
      841 ataaatttaa actcttgcaa tttgctattg agcttatttt ttacatccca atgagtgaga
      901 tacgcagaga aaatatacag ctctactgcc tctgaaacag ctttctcata tattgaaatc
      961 agttccttct catttggtgt atctgaatgt aaaaataact gtgtcatccc ttttgactcc
     1021 tctatatttg ttgagattgc ctaaaaaatt taggaaacag ataatttgca tgttggctat
     1081 ttcacgcctg ttgggtacca ttttgttcca ccctttgact taatgcccac ttctcaaact
     1141 tttcagacga cctctacaaa actatgaaca ggtcgtctga aactccgcct ttatctgaac
     1201 aagccccaga aggtcatgcc gagcaatacc aatacgccga acaccatagc ggcggcgtag
     1261 gtgtagataa agccggtttg gactttacgc acttgcgcgg caattgcgcc gaccagtttg
     1321 gcggagccgt tgacgatgcc gttgtcgata atggcggtat cgccgacttt ccagaagaag
     1381 tttcccaatg cgcgcgtgcc tttggcgaag acgttgaaat acaaggcgtc gaggtagtat
     1441 ttgttttcaa acaaaacgta aaccggacgg aacgcctgcg cgattttagc gggcaggtgc
     1501 ggcagtttga cgtacaaaag ccatgcgctc aatacgcctg cggtagcgag atagaggacg
     1561 ggcgaatgca gactgtgcga caccatcgcc aatgcgccgt ggaactcttc tttcatgatg
     1621 tgcatggtcg gatgcgcgtc ggcgttgacg aaaatcacgt ctttgaagaa atcgccgtag
     1681 agcatgggtt cgatggcgat gtagccgatg atgacggacg gaatcgcaag cagaatcagc
     1741 ggcagggtaa cgaccagcgg gctttcgtgc ggattgtcgt ttttgcccaa gccgtgatgt
     1801 tcttcaccat ggccgtctga atggtgttcg ggcagactgc gccatttttc ttcgccgtgg
     1861 aacaccataa agtattggcg gaacgcgtaa aacgcggtaa cgaacacgct ggcgaggacg
     1921 gcaaaatagg caaagccgct gcccggcagg gtgctgtatt tcactgcttc gataatcgaa
     1981 tctttggagt agaagccgga gaagaacggc gtaccgatca gagacaaatt gccgatcagc
     2041 atagtcagcc aagtaatcgg catgtatttt ttcaggttgc ccatatggcg catatcttga
     2101 tcgtggtgca taccgataat cgcactgccc gccgccaaga acagcaaggc tttaaagaag
     2161 gcgtgggtca tgacgtggaa catcgccaca gaataggcgg acgcgcccag agccacggtc
     2221 atgtagccca gttgcgacag ggtagaatac gcaaccacac gtttgatgtc gttttgaatc
     2281 acacccaaga agcccataaa cagggcggta atcgcgccga ttaccataat gaccgacagc
     2341 gcggtgctgc tcatctcata aatcggcgac atacgcgaca ccataaacaa accggcggta
     2401 accatcgtcg cggcgtgaat caatgcagaa atcggagtcg ggccttccat cgaatcaggc
     2461 agccagacgt gcagcgggaa ttgtgccgat ttacccatcg caccgacaaa caggagcaaa
     2521 caggttacgg taatcaaaga ccattccacg ccggggaaaa gctggatagt ggcattttgt
     2581 acgttgggca gataggcgaa tacgtcctga taacgcaggc tgccgccgaa ataggcaagc
     2641 accaagccga taccgagcaa aaagccgaag tcgccgacac ggttgatcaa aaaggctttc
     2701 aggttggcaa atgtcgcgcc cgggcgtttg aaatagaaac cgatcaagag atacgacacc
     2761 aagcccaccg cttcccaacc gaagaagagc tggatgaagt tgttgctcat aatcagcatc
     2821 aacatgctga atgtaaacaa agaaatatag ctgaagaagc gttggtagcc gactttttca
     2881 tcgtgcatat aaccgatggt atagatatgc accatcaacg acacgcccgt taccacgacc
     2941 atcatcatcg ccgtcatcgt atcgaccaag aagccgacgg agaaatccaa accgcccatt
     3001 gtcagccagg tatagacgtt ttcatcaaac ttggcacggc tgccattgag gaatccccac
     3061 agcacataag ccgacagcac ggcagataca gcgacaccga gtatcgtaac cgtatgcgcg
     3121 ccggcacgcc cgattttgtt gccgaacaaa cccgcaatca acgagcctgc caacggaaca
     3181 agggcaatta tcaaatataa agtcatatcg ttcataatta ccctttcaac tcgtccaaat
     3241 cggcaacatt aatcgtttgt cggttgcggt acaccagcac cataatcgcc aaaccgatgg
     3301 cggattcggc agcggcaacg gtcaatacga agaatacgaa aatttgtccg gcagtatcgc
     3361 ccaaatgttg cgagaaggcg ataaagttga agttcaccgc caaaagcatc agctcgatgg
     3421 acatcagcaa taccagcacg tttttgcggt tcataaagat gcccatcgcg ctgataccga
     3481 acaggagagc gcccaatacc agataatgcg tcaaagtaat catgctttgc cctccccttc
     3541 cgtcttgagg ccgtctgaaa cttcgctttc ttcggcagat tcgacttgcg gtttgaccgc
     3601 ttccattttc accagacgca tacggccttg atcggcgcgt actttaactt ggtcggctgg
     3661 atccatacgt ttcggattgg tggttttgcg gtgaaccaat gcaatcgcgg ccaccatgcc
     3721 caacagcagc aataccgccg ccaattcaaa cggcaacagg tagtcggtat aaatacggct
     3781 gcccaaatcg cggatattgt tgtaatcggc cggaatgtct ttcatcagac caaatgcggc
     3841 caggtcggtt ttcgggttga ccagaatcag gatcagggca accgccaaca acgtaccgac
     3901 cacaccggca acaggcgcgt gccgccagaa accggcgcgc atttcctcga tgtcgatatt
     3961 cagcatcatc acgacgaaca ggaacaacac catcactgcg ccgacataca cgaccaccag
     4021 cgtaacgccc aaaaactccg cctgcatcag catccaaatc atcgcgctca cgcagaaggt
     4081 cagcaccaga tgcaaagcgg catggacagg gtttttggcg gtaacggtac gaaccgcacc
     4141 gtacaaaacg atggcggcaa ggatatagaa cagaatcacg gaaaaagtca ttcgtctgct
     4201 ccttagcggt acggcgcgtc agcggctttg cgtttggcga tttcggcttc gtatttgtcg
     4261 ccgattgcca agaggatggg cttggtcata tgcaagtcgc cttttttctc gccgtggtat
     4321 tcaaaaatat gggtttccac aatcgcatcg gtcgggcagg cctcttcgca gaaaccgcag
     4381 aagatgcact tggtcaggtc gatgtcgtaa cgcttggtgc ggcgggtgcc gtcttcgcgt
     4441 tcttccgatt cgatgttgat cgccattgcc ggacacaccg cctcgcacaa tttacacgcg
     4501 atgcagcgtt cctctccgtt cggataacgg cgttgcgcgt gcagaccgcg gaaacgcacg
     4561 gattgcggcg ttttctcttc gggaaaataa attgtgtctt tgcgggcaaa aaagtttttg
     4621 agcgttacgc ccatgccttt gaccagttcg ccaagcagaa aggtttttac taagttagcc
     4681 atattatgtt ccctcaaaac agggatttcg ttaggtattc aaaatcgctt tgttcagacg
     4741 gcctcaagat gccgtctgaa acttatttcc acaaattcag cggtgaaatc atccacacgc
     4801 ccaaaaccac gatgtaggcg aagccgatcg gaatcagcac tttccagccc aaacgcatga
     4861 tttggtcgta gcggtagcgt gggaaggttg cacgaatcca cagataccag tacagcaccg
     4921 ccgccatttt cacgaacatc cagaatgcgg aaggcgtacc gacaatgccc cagctttgcg
     4981 ggaacggaga caaccagccg ccgaggaaca tcagcgatgt cagcgcggca atcagaatca
     5041 tgaaaatgta ttcggcaagg aagaacagcg cgaatgcaaa gccggagtat tcgacgtggt
     5101 gtccggcaac gatttcagac tcgccctctg ccacgtcaaa cggtgcgcgg ttggtttcgg
     5161 caacggcgga aatcagatag acgatgaaga ttgggaacag cggcagccag ttccacgaga
     5221 acacagaacc gcccgcgatg ccttttgcct gcgcggcaac gatgtcggag aagttcatgc
     5281 tgcccgatac catcacaacg cacaccagcg cggcactcat ggcaatctcg taggaaatgc
     5341 tttgcgcgga agcacgcatt gcacccaaga acgaatattt ggagttggaa gcccagcccg
     5401 cgataatcac gccgtaaacc gacagcgagg taatcatcag gatgtacaaa aggccgatat
     5461 tgatattggt cagcacccat tcttcgttaa acggaatcac cgcccacgcc gcgaaagacg
     5521 gggcgagcga cataatcggg ccgatgtaga ataaggcttt gtttgacagc ttcggacggg
     5581 ttacctcttt aaacaagagt ttgaacacgt cggcaaacgg ctgaatcaga ccccgcgggc
     5641 cggttacgtt cgggccgacg cgaagctgca taaagccgat gactttacgt tcgaaatacg
     5701 tcaggtaggc aacggtcaga atcagcggaa tcaggataat cacgattttg acgatgacgg
     5761 ataccaccaa gcctacggtg atgcccaaat cgcccagacc gagcgttgcg gcaaagaggt
     5821 tttggaacca ttcctgcata atcaagctcc cgccagttca atagtgccca tcaacgcacc
     5881 cagcgcggca ttttcggtat gcagcggcag atgcaccacg ttttcaggca aaccggcatc
     5941 ggctttgacg gcaaccgata cgcttgcgcc gttttgtttg gcgacagcgg tttgtccgtc
     6001 ttgcaggccc aagcgtgcca atgtgttcgg atttacacgc gcggcaggca cggcggcatg
     6061 gctggtttct tgcaacggtg cggaacggcg cacgatagaa tcagtatgat aaataccgac
     6121 gccgccgaca cggacgaggc ggtctgaggc cgtctgaacg ccctcccctg cccatgtgct
     6181 gcggttgtcc agtttggacg gcaggctttc tgcatccagc gcgtctttca gaatcgcggc
     6241 ggtatcgtgg tattcaaaac ctttcaggtc aaacaggttg cccaatacgc gcaacacttt
     6301 ccacaacgga cgtgaatcgc cgaagccttg taccacgccg tggaaagatt gcagacggcc
     6361 ttccatattg atgaagctgc ctgatgtttc ggtaaacggc gcaatcggca gcaatacgtc
     6421 gcacacgtcc agcagcgttt cgctgacaaa cggcgtaaac gccatcacgc ttttcgcctg
     6481 tttcaacgcg gctacggctt ttgcaccgtc aaccgtatcg atttcaggct cgacgttgag
     6541 cagcaagact gcctgtttcg gcgtgtttgc catttcggca acgctctcgc ccgagttcac
     6601 acccaatacg tccgcaccga cgctgttggc ggcttgcggc aaaatgccca gcactgcgcc
     6661 ggtcgcgtcc gccaactctt gcgcggcggc ataaatggcg gcgtaatcag gatggttttg
     6721 cacttccgca cccaaaatca ccgctgcttt ttcagcgttt ttcaggctgg cggtaacggc
     6781 atgttccgca tcggcagaca ggtttttcag acggcctgcc cactcgtcgg gatgtgcggc
     6841 ttcttgagac agaagcggca taaacaattc ttctttactg ccggccaata cgctcaaggc
     6901 catacggtct ttggcggcgc ggcgcaggcg ggcggtcagg agcggctgtt ctttgcgcaa
     6961 gttcgcaccg actaccaata cggcatcgtt gtcagccaaa gattcaatac tttgtcccaa
     7021 ccattgcgca cctttaaggc cgtctgaaag acgtttgtct tgttggcgca aacgggttgc
     7081 aaagttttta acacccaagc cgtcggcaaa ttttttggcc agatacagct cttcaaccgt
     7141 attcatcgga ttagcccaaa cgccgacttg gttttggttg ccgtctttgg cgatacattc
     7201 aatcgcgctg cggacatatt ccaacgcggt tttccaatcc acgtccatcc actcgccacc
     7261 ctgtttgatt ttcggatttt tcagacggct ttcgtgatac aggccttcgt aggcaaaacg
     7321 gtcgcggtcg gacagccagc attcgttgat ggcttcgttt tccaacggca acacgcggcg
     7381 gacggtatgg tctttggttt gtacaatcag gttgctgccc aaagcgtcgt gtgcggaaac
     7441 ggatttgcgg cggttcaatt cccaagtacg cgcgttgaag cggaacggtt tgctggtcaa
     7501 tgcgccgacg ggacacaaat cgatgacgtt gcccgacagc tcggtttcca ccgctttgcc
     7561 gataaagggc atgatttcgg agtgttcacc acgattcacc atcgtaattt cctgcaaacc
     7621 ggcgatttct tcggtgaaac gtacgcagcg ggtacagtgg atacagcggc tcatttcctc
     7681 ggcggaaacc aaaggaccca tgtccttgcc gacgacggaa cgtttttctt cggtataacg
     7741 gctggtggtt ttgccgtagc ccaccgccaa atcctgcaac tggcattcgc cgccctggtc
     7801 gcaggtcgga caatcaagcg gatggttgat gagcaggaac tccatcacgc cttcttgcgc
     7861 ctctcgggct tttgccgaat gcgtacgcac aatcatgccg tccgttaccg gcgtggcaca
     7921 ggcaggcagc ggtttggggg ctttttccac atccaccaga cacatacggc agttggcggc
     7981 aatagagagc tttttgtggt aacagaaatg cggaatataa gtaccgagct tgtgcgcggc
     8041 ttcaattacc gtcgcgccct gctccacaga tacctgtttg ccgtcgattt cgatttgtaa
     8101 catggttcgt tcctagttac gggtatttga taaataattt tttatggaga tcgtctgaaa
     8161 aatgggcttc agacggcctt ttgagtttca ttgacaatca atactgttta aaacgtttac
     8221 tgccaccttg ccgtcattcc cgcacaggcg ggaatccatt ttttaaattt cggcaactgc
     8281 ttttcaaata tcgggttctg taaattccac tatggattcc cgcctgtgcg ggaa
//
LOCUS       DAXGCP010000089         8277 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.089, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000089 DAXGCP010000000
VERSION     DAXGCP010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8277)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8277)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8277
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.089"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(62..1804)
                     /locus_tag="ACFJCW_001809"
                     /pseudo
     CDS             complement(62..1804)
                     /locus_tag="ACFJCW_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009119804.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
     gene            complement(2022..8095)
                     /locus_tag="ACFJCW_001810"
                     /pseudo
     CDS             complement(2022..8095)
                     /locus_tag="ACFJCW_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
BASE COUNT         1784 a         1935 c         1958 g         2600 t
ORIGIN      
        1 ctgcctgcaa aaaaccggca gcttttgtgt atcttgtcat acattattca cttcaaccgc
       61 atcaaaacga ataacccacc tgaaaccccg ttacccattt cttcgtctga aaatattcgg
      121 gctttttcaa tgcacggccg gtaaatatat cgtaatgcag gttgccgcca agctttatct
      181 gcccgcgtat cccaattgct gtgccggcta gagtttggcc cgataaccat ttggcggatt
      241 gtcctgaaac atgtcctaca tcagccccaa gataaagctg atggcctggt ttaaattgcc
      301 agctcaaatc gttgcgccaa taccatcccc gctcggcagg caaactcatt tcaccgtcga
      361 agccacgtac ggtgtggtgt ccgccgatag ccagtttgtc ttgcgatgtt agcggggttt
      421 tgttccattg tgcatgaacg gatgtgtcat aggcaaatag ctgtttaccg atttgaaaag
      481 gagtatttac atcagccgat gccgtccaaa ttttcatacg tgacgtgcct tcgccaaagg
      541 cttcttcagg cgcgcgcaga gcatctttca tgccggtgcc gtgtttatat ttcaacttaa
      601 aatctgccgt actgcgaccg atatatcctt tgtgggaaag ttctgccaac caacctgtgg
      661 ttttacgccg ttgtacagtc agttcggcat catcaatgta actttttgtt tccctcgtcc
      721 acagttttac actgagatag gttttgcgtt tggcatcacg atacaacagg cggttgaagc
      781 cgaaatcagt gttgtaactt tttccattat agtcatagac ttccgataat ccggaaaccg
      841 cctgatggta acggtagcca ttgtgattga atgcccatgt ccatttaccg aaaggggctg
      901 aataatgtac ggcgtaattg tttgatccgc cttctttgcg atggccgtca aaattttcct
      961 catcgggcgt accgccaatt gaacgtccat aatttacata gaacatatca ctcagtccaa
     1021 aaggattgtc ggcagagaga gtgatatttc cttggtattt tcctgtcgcc tcactacccg
     1081 aattatccat ccccacactc acacagtagg gcagcagacg ttaccgccat tgcaccacga
     1141 catcactttg gtttggttct ctctctacgg gaacgatttg gagatcggct tccgcagtcg
     1201 ggagacattt gagattttcc agtccttgtt ccaaatcacg cagattcaac agatcgttcg
     1261 agcgggtggg aaatttgttt tggaatgctg caatacgtcc tgcatgggtt tgatcatcgt
     1321 tggaccgatc gattcgtatg gagcgcagat agcccggcat cagggttaat tgaagcttgc
     1381 cactattcaa atcctgtggc gcagccaaga tacgggtcgt ggtatatccc ctgccgatca
     1441 aagcattttg tgctaaggac atgatttgat taatgtcgcc cgcatgcaga cacttgccgg
     1501 aaacaaaatg tgtttggcac aaggcatggt tgagcgcaaa ccggaattta gccgcttctt
     1561 cacccaccaa ttccacctca gaaataggaa agcaggggct tgcctcatcc gaatttgcac
     1621 cgcctacctg tgttgccatc ttctctatgc ccgtatcggt accatccaaa cgaacatctt
     1681 gttccggctg catctgttca cgcaattgct tctcacgttg acgttggaga atatcctgtt
     1741 gttgtgaaac agcttcaggt gtgggggcgg ctgatgttag ggtggggagg cagccatcaa
     1801 tgataggact aacagtgata agggataggg atgaaataca tttttggagg aaaagaaagg
     1861 tttcatagga ttggtctaag taatgtaagt gggcaattat agcaatgcac aaaaacaaac
     1921 aaaaagataa aaaaactcca taaatgaaaa tttaatcaca tgtttatagg atatgaaaaa
     1981 gaggaagcga aatctgaagc cgtctgaaaa caaccccaca cagcatcggc ggacgagttt
     2041 ccctcagctg ctccggcagc cgtacccagc atccttgtaa tcgccgaaac ggtctctttt
     2101 tcctccgcat tcaggctgcc gccgtctcct ttgccgtaca gccatttgcc gatgattggg
     2161 gcggccgctt ccgacccgcc cgcacccaat gctcctgccg gggcattgtt gcctcatgct
     2221 gcggcaaccg ctgctcctaa taccgcgtgg gcaagaacgt gagcggtttc ttgactggcg
     2281 gttagtttgc cattcgcgtt ttgaccggct aaatctttaa agtgctgtcc aatcgcatac
     2341 gatacgtctg gcgatgcggt agccgcagcg atgcccgctc cgctttgggt cggctcagct
     2401 aaacctgagg ctaacatgtt gagaatgact ttgccttgtt gccaattatc tgcttttgct
     2461 gccgcatctt gagcttcatg ggctttgcgt ttggcagttt ccatatcgcc attggctaat
     2521 gcctcggctg ctgctgtttc ggctgcttct ttgtctgctt tgagtttgtc taaatgttgg
     2581 ttaatctcgg tattggtttg ttgaacattt ttactaaaat cttggctgac ggttctttgt
     2641 aaatccagtt cactttgcac tctatctttg tcaaatatgt ttttcaggct gcccgaatgt
     2701 cgttcggcgg tgtctgtggt tacgtttgta tcaatatcgg ctttggtttg tgccgctatt
     2761 ttgcctgtca gcctgatttg tgcggcttcg tctgtgattt gaatgttttt gggtattgat
     2821 gccgcttttt gtgatgctgc tttgactgtc gctgtcgctg ccgtacccta ctgatgaact
     2881 tgcgccgttt ttatcggcta tgcttgtcag gtgtttgtct tgaggtttat tttttgcgcc
     2941 ctgtcccagt gttttgccgc ttacggcaac gctggcaccc aatccaaaac tttttccttc
     3001 gtattggctg taattttgaa tatcactgcc ggcgagtgtg cctgtgctga atcggttttt
     3061 acccttgtct tttgcgcttt ggctgctggt gatgatgccg cctttgaggc ctgtatggtt
     3121 tccgaccttg atttgatagc cgtcttctcc ggcataaata ccgctttgct cggttaccga
     3181 agcatggtcg gctcggattt tgctttggct gtaatcgcca ctggcactga agccataacc
     3241 tacggtaact tgtgcaccgg cgttttgttg tttgctttga taagtttctc tatcttgtac
     3301 actttgaatg cttaggtttt tggcattgac ttgtacgcct ttgccgcgta cttgcgcgcc
     3361 tttgatgatg gtatcgccac cactttggat aagggtttgg ctgcctttgt cgccaatatg
     3421 gctatggcgg tgggttacgc tatcgccata gccgtagcct ttgccgacat tgccgcctgc
     3481 ggcaacgcct aatgaccagc ctccttgtcc gaatgatacg gcagcacctg cgttccagcc
     3541 tgctgatttg ttttggctgc gttcggtatt gctttgctcg gctgattgca gatggatttg
     3601 cttatcggca atcaggccgg ttcctgctct gcctgaaaca tctgagcctg tgatgttgat
     3661 attggattgt tcgccgcacc ttcggcaata agggtagttt tgccgcctgc ttgaatttga
     3721 ctcgcttggg cttgattggc ttgaacttgg gtggtttgtc ggttttgctg ttcgccgtag
     3781 gttatggaga tgctgacttg tttggcattg gttgtaccat tggctaagtt ttgtgcgcct
     3841 ttgcctgttt gataggcctg ccaacctgca ttggcagccg ccatggcatt aacgcggtcg
     3901 tttttgcttt gtccgacttg tttgctgctt tgtgtgctac ggcaatcgct tgttgtgcca
     3961 aatcggtaac gggcgaactg aatgccaccg ttaagccttt ttgttcgtag gtttgggtgg
     4021 ttttgctgtt taattggttt tgtgctgcgc caatatccat actttgcgtg ctgataaggt
     4081 tgttgccctc agggctggaa acgttgctgc cggtttgttc gtagtgtttg cttgcaacaa
     4141 tggtggtatc gcctttcagg ctgcctacgg tactgcctgt atgttcgttg ctttgggatt
     4201 ggttttcttg tgtgtttgtc ttgctgccaa tagtgaagcc gatacctgca ctcatcaatc
     4261 ctgatttttg ggtttgatga taggtttcgc tttggctttg agtttgggtt gtaccaatgc
     4321 gaacatgatt gcctgcttga atccgggtgc cattatcgga aataacatta ctgccaagga
     4381 tgttggcatc gtttcctgcc tgcaatacaa cttgcttgcc ttcaaaggtg ctgctttgag
     4441 cagtttcgtg atgactttgg gctttatcgg taatgactaa tttattaccg ccgccgcttc
     4501 tgcctgtatg tttggacgca tcatcaactt ggccggcatg gatgcctgag ctgatagtaa
     4561 tgtcattttt agcatacacg gcaagtgtgc cttttgcgct gccgacttcg gcagctttgg
     4621 cattgagatt attccctgac aatagggtaa catcgccttt tgtttgaatg ctgctgccga
     4681 cttcgttcgt tgaacctcgg atggtatggt tatcggcatc aaaatggatt tcttgatatt
     4741 tgccggtttg taccgtatcc aggttaatgt cgcgtcctgc ctgcagccgg gtttgccctt
     4801 gatctgattg attgctgatt tgaccggcaa tgatgttgat gtctttgcct gcctgcgctg
     4861 ctaaaacacc tttttctttg cctgtgatat aaatacctgc cattcggtct aggtaggtgc
     4921 tgctaccttg tgcattttga ctgctcttgg ccgtgctttg gttgttgatg ttgttacccg
     4981 cattgagcaa taatgtctgt tcggcagaaa gaatgccgcc aatattattg atgtcttgtg
     5041 tggccgtaac cgctgatttt tgcgcatgaa tacgcccacc gatattgtct agcgtatcgg
     5101 tattgataat aagcgcattg cgccctgcaa tcgtgcctga gtttttcagg ctgcctgaaa
     5161 cattgatttg tgtattgctg cctgacaaca atgcaccttt accgtctatg tcgccatttt
     5221 taacgcgtac ataaacctgt ggcatcaata cggtttgtgt gccgccatca ggaagtttaa
     5281 cttctttttg taccaaccaa acaatatcgc tggtcagttg cgctgcttgc tcggcactta
     5341 atgcaatgcc aacgctgaga ttcatcgaac gtgccgcagt cgcgccatta tccattaggg
     5401 ctttaaattg ttcttcgtcg ttttgataac cgtctaaacg acgatgccct gtcagctctg
     5461 cgatttgttc attgattaaa cgttgctcgt aataaccatc acccaaacgt ttatgtaaat
     5521 tgtttgggtc tagtttgagg ctgcccagca tatagtcact acccaaccat tgacggtagt
     5581 tggcaaagcg tggatcggtt tcaacaagat agcctttatt ggcaggattg ataatgtata
     5641 agctgctgcc gggtaatggg gtaaaagaat tgggcgtata gggtagcgaa ataccgttgc
     5701 ttttcgcagt acggatatta tcccggttac tttgtggcaa ctcagtgcct tggctgggcg
     5761 catgacggct taatgctttg ctatgcgatt cataggcaaa tgaacccagt gaaatgtcgc
     5821 gtgtgatttc ctccggcaaa gtataatttt gttcacgatg ccctgtttca tcatgtcctt
     5881 tacgacgcgc acgccagtag ttgtgcaact taccattttc gctgaagact ttcttctcgc
     5941 caaaggtttg ctcgttatgc aaaccgtctt tttctgtttg cacaagcaat tgccgccggc
     6001 gatgattcgg ctgtcgctgt tgaagactgc tttgctatca ataatcaaat cgctacctgc
     6061 aatgatttta gcaggcgcag ttccggttac ttgagtttct tgcgttactt tttcataatc
     6121 gtatttatgc caattttcat gcgccactcc atcaggggtg cgtaagtggt ctgattcatt
     6181 gttgtagaca aaccagccta attcatgttg cgtgccttct cgcaataatt cgtgtcgtcc
     6241 aaatgcttcg taatcaacaa tacgctcgcg ccctgtttct accaactgcg ttttcaaatg
     6301 ctcattggta ttgtgcagct tttctacacc taaacgcatt ttgcctgcag cttcaatgat
     6361 tgcgccggca ttgtgtatcc tttgggcttt gcctgtggct tggtcattgg tatctaatgc
     6421 gccgccaacc gccatatcgt taccgctgta aatcagactg ttttcacggt tatttaattg
     6481 ttcaatgcct aaattcaggt tttcgcgtgc cgcaatggcg gcacctgtac cgttttcatc
     6541 ttgattgtct aagcgggtag ccgcaatagc gatattgtcg ccataaatcc gacctgtacc
     6601 gatattattc atttgcccgg cttggatttt ggtttgttgt ccgtcaatca agcctctatt
     6661 ggttaaattg tgctgcgtgc caatgtctgt cgtaccgccg gattgaatgt tgccttgtac
     6721 tgcattatca aggttatttg ctttaatccg aatgcgtttt cctgcttgca aggtatgtga
     6781 atttttcagg ctgcctcgtg tactgagcga caattcattg cccgccacga tcttgcgttc
     6841 tacataaaaa tcatcttgta acgcaatatc cagtttatta tcagcggcaa gtgtgccgtt
     6901 gttggataac gattttgcct gaatggcaac atcacggcct gattgtatcg tgccattcgt
     6961 attatcaatg acaacggtag attgctgacc atcgtgaata atcagttgtt gattggtcgc
     7021 tatttcgcca ttttgattgt tcaggctgcc tgaaacggct aaatcctctg ttcctgccga
     7081 caataatttg ccagtgtttt gaatcgattg actgtgaatt tgagtgcctt gttgcgatac
     7141 cgccgtaccg ctgttttcaa aggcttgact gcggatattg actttgtgtt ccgctgtatt
     7201 attcatatct tgcacattgg cggcagccat cgtgccacta ttgaccaaac ggccatttgc
     7261 atcaatcgcc acattaccgg aagaagcaaa caactgccct tgattacgaa tgcctgcttg
     7321 ttcggccgta ctgatcaagg tgattttgtt ggcatacaag aatacgtgtg aaatcggtat
     7381 cacgggcatc caaaccgtgt ccggcgatta caacattgcc ttgccttatc ttaaagccac
     7441 taaagtctcc tgcttgatat tgcggttggc ctgtcgtcaa agtggcacgg gaagcattga
     7501 taaaaccacc accattgact gcaatccctg ccggattggc aataacgact tctgcacgtc
     7561 gtccacccac ttcaatatag ccattcagtt gtgaaggatg gctgctgttg atttggttta
     7621 caaccacacg tgcttcgccc cttgtcaacc aaggattgcc ttgaatccaa ccgcctagct
     7681 gtgtttgggt gttgctgcga ctgttgttta aaatcgcccc gcgattaccc acatcaaact
     7741 gggcatattg attaacagaa acccctgccg aagtaggggt ttgaatattg acttgcggta
     7801 tgccgttacc tgtttgcaga atcgtggctt gttgggtttt aggagcagct ttatcagtaa
     7861 taatgccgtc agcaaaagca atattgaccg tacccaaagc caaacataaa gaaaagccta
     7921 atgcagaaaa acaaaaggct ttggaatgag taggaatgaa agaaacggat ttcacataaa
     7981 cgctgcccga accactatcg gcacagcttt taccttcgcg cttggtggtt tcggcaacag
     8041 ctaccacagc accgcgtttg cggttgaaaa tcacacgata gagggttttg ttcatgattt
     8101 tagttatttg atttttatag agttattaca aacattggac agtctgggca ttctaggaca
     8161 aagattttgg taagtcaatt accgccattt ttttattaaa ttaggggacg taccggataa
     8221 cggctaaaaa tcccatttag gttagaataa gccaatgaga aaagccgtct aagccgg
//
LOCUS       DAXGCP010000090         7926 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.090, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000090 DAXGCP010000000
VERSION     DAXGCP010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7926
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.090"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..3404
                     /locus_tag="ACFJCW_001811"
     CDS             <1..3404
                     /locus_tag="ACFJCW_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HFC4151884.1"
                     /translation="KTIILSLAGAFGALAFADTPNNTEQQKELNTIVVHGKRSADQKG
                     ADDVYYKNVSNAYVGKEYLERYRVQSAGDVLKGLNGVYNMNTRTAGGAITPNIRGITG
                     KGRIPVTIDGTEQTIDVWMNNYGVGDRNYLDPALFRSIAVEKSPALTRGVKSGVGGAM
                     SIRTIEAGDIVPEGQKFGFQLKTEFANNRTRPANNLNQWLGWEDYRTLPLGATADGAG
                     GGSDPITGQQSPQALVVDNFTPPQHKSGRDNWRFGGDRSYMAAAAFKTELSDGLAAYS
                     YRNKGNYFAGRKGAEGYLNNPVYDLQKCYDEGGSDFNCKNSATFIPNMARIYHPGVEV
                     LNSNTETKTLLLKNNWHLPGSHRLGWQYMRTDVRFGEINPFHTTYVMNMEEHNETNRP
                     KELSPQAQSIDSTIRTDTYKLGWAWKPENSRWVDLQANLWRIKTNSTRHQSGGMDLSS
                     ARPDPFYDVWYWCTQRGRIPPEHVDNYSSCNDLMNDFGVNGLTKEQVLAMTPNDNGQF
                     RVISGAEQKTRVSRTGFDISNRFRLRDRLSMTLAADYQKEKLAEEVEIVNSQDLFNLA
                     GMVTGLTKLAGPRGGERREWGINLVFDWQAADRLKISAGIRYHNFRGFDTALAEGRAR
                     RDPRYQAGDGTQHYADGAYLPYFELAGDQERRDWNVVAEQLRQAYQSGDAAAIAAAVQ
                     AEQAHGARYHLLKYYDGSYRTDGYVYIGNDGRAYFDGRFGGVNEAQNQPLYRVRPVYV
                     PFVNGKLDSGALPQHFHDFVSNYQEKVTNPQGLHGTHYRYWAGVGNPIDCIRSDAASC
                     LAHNLSGKVTNFQVGYPEYGDDTGLGLKIIGRHYTEEQYWAQPKPIRAHAWAPTIAVS
                     YDLTDNSRLFVRYAQMSRFPSVYEVGSFYNDVAYAGMPKAPNFRFKPERSRSWEIGYS
                     FNFAPYWSRLRAGDMRLTYYRNRIQNVIETTDYFRTVQYDRKDTAGLEWQSRIDTGRF
                     FAALGATYRLKQQMCDRDTAFDYDPYGAKGVPICIEGGYGSTRGYQALQPKYSINLDA
                     GVRLLGEKLELGLRGIYHSRVNTKQYDQLLQKDLGIIFDTTGKPHHWRSSLTWDVYGR
                     YRLHKNLNVNLGITNLTNRYYLDPMSNVAAPGPGRTVTFGLTAKF"
     gene            3619..4602
                     /locus_tag="ACFJCW_001812"
     CDS             3619..4602
                     /locus_tag="ACFJCW_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slam-dependent surface lipoprotein"
                     /protein_id="HFC4151885.1"
                     /translation="MSIRNKTLLAVLLCGVFGVAAAAPAGGSSQRKSQDPNSDPTTVR
                     PGTSDKQPFGAGKAGLAFSINNGGSWSKSINLDDGPVKYIRAKYQAPINGNDPYANVD
                     GTRNLQYLRLGDVKPVIGWFYNPTLGQVWYENHHNNTEVYSVRQIANPAIPAAPKFGG
                     LVIAKVPGMGGSNGNVFFGEWAPRAGNPQQISTDLNMADGKRTVWYVGDNPTGNTTGV
                     RTATYNVLGINKHTPGQNDFYTGQVTATFGSGITGTMAGRISRSSDHVDFDHAKIDNR
                     NGTFADPSQGMTGRFYGNQAAAMAGYTTRGTGNVGDDVAFGGSATDIETRK"
     gene            4873..6363
                     /locus_tag="ACFJCW_001813"
     CDS             4873..6363
                     /locus_tag="ACFJCW_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HFC4151886.1"
                     /translation="MNKPLSLALFCLLLPITAHADNPADERRRLLDEGSRQTQQYRES
                     GWLDTEQARGEVEENDGYISIGGEIYQVGDTAEELESAIYHALNARQWHKVRQFAARY
                     AKLPRHKPALIHLADALQKRDEGDFRAAGNSFQTALEAEPDNPRLLLEAGRFYAEDNQ
                     NKESAAAFEKVLKTDIPAETRPIVENYLSELGKRRRWHGQISLGYGYNSNVNQGNGIN
                     QCVWEIAGMCLMERTLPAPTDSTFSSYSATAEKTVPLKGHHGVQVRGVLYGNRYTEKD
                     KDSAAMPDYGYRNGSLYAGYAYADARSSFSLLPYFEYDFRNRHTHYRAWGADADWSRT
                     LSPHWRINSHAGAKKTGYGGQSKTYFADFKQYELGAGAEFSITPKSGLLVNFDAARKA
                     YPEKSSSSKEYTARLGAYRLFSGGTYLNAVLLYRRSLYDAASFVSDNKRRSDKQYIMM
                     AAAGFPQWNIKGVYPELRFRRTIAHSNAVYYRYRQNEWLLGFKYRF"
     gene            complement(6431..7828)
                     /gene="aspA"
                     /locus_tag="ACFJCW_001814"
     CDS             complement(6431..7828)
                     /gene="aspA"
                     /locus_tag="ACFJCW_001814"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HFC4151887.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEALGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEAFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAESGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHRNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
BASE COUNT         1878 a         2305 c         2150 g         1593 t
ORIGIN      
        1 ctaagaccat tatcctaagc cttgcaggtg catttggcgc attggctttt gcagacaccc
       61 cgaacaatac cgaacagcag aaagaactga ataccatagt cgtccatggc aaacgcagtg
      121 ccgaccaaaa aggcgcggac gacgtgtatt acaaaaacgt ctccaacgcc tacgtcggca
      181 aagaatacct cgaacgctac cgcgtccaat ccgccggcga cgtactcaaa ggcctaaacg
      241 gcgtgtacaa catgaacacc cgcaccgccg gcggcgccat cacgcccaac atacgcggta
      301 tcaccggcaa gggccgcatc ccggttacca tagacggcac cgaacaaacc atcgacgtat
      361 ggatgaacaa ctacggcgtg ggcgaccgca actacctcga ccccgccctg ttccgcagca
      421 tcgcggtgga aaaaagcccc gccctcacgc gcggcgtgaa atcgggcgtc ggcggcgcga
      481 tgtccatccg caccatcgaa gccggcgaca tcgtgcccga agggcagaaa ttcggcttcc
      541 agctgaaaac cgagtttgcc aacaacagaa cccgcccggc caacaacctc aaccaatggc
      601 tgggctggga agactaccgc accctgccgc tcggcgccac cgccgacggc gcgggcggcg
      661 gttctgaccc gatcaccgga cagcagagcc cgcaggcgtt ggtggtagac aactttaccc
      721 cgccgcagca caaaagcggc cgcgacaact ggcgcttcgg cggcgaccgc agttatatgg
      781 ccgccgccgc cttcaaaacc gaactttcag acggccttgc cgcctacagc taccgcaaca
      841 aaggcaacta cttcgccggt cgcaagggtg cggaaggcta cctgaataat ccggtatacg
      901 acctgcaaaa atgctacgac gaaggcggca gcgatttcaa ctgcaaaaat tccgccacct
      961 tcatccccaa tatggcgcgc atctaccacc ccggggtgga agtgctcaac agcaacaccg
     1021 aaaccaaaac cctgctgctg aaaaacaact ggcacctgcc cggcagccat cggctcggct
     1081 ggcaatatat gcgcaccgac gtgcgcttcg gagagatcaa ccccttccac accacctatg
     1141 tgatgaatat ggaagagcac aacgagacca accgccccaa agaactgtcg ccacaggcgc
     1201 agagcatcga ttccaccatc cgcaccgaca cctacaaact cggctgggcc tggaagccgg
     1261 aaaacagccg ctgggtcgat ctgcaggcca acctgtggcg catcaaaacc aacagcaccc
     1321 gccaccagag tggcggcatg gatttgtctt ccgcccgccc cgatcccttc tacgacgttt
     1381 ggtattggtg tacccaacgc ggccggatac cgcccgagca cgtcgacaac tacagcagct
     1441 gcaacgacct gatgaatgat ttcggcgtca acggcctgac caaagaacag gtgttggcca
     1501 tgaccccgaa cgacaacggc caattccgcg tgatttccgg cgccgagcag aaaacccgcg
     1561 tcagccgcac cggtttcgat atcagcaacc gcttccgcct cagagaccgc ctgagcatga
     1621 ccttggccgc cgattatcag aaagagaaac tggcggagga agtggaaatc gtcaattcgc
     1681 aagacctgtt caacctggcc ggcatggtaa ccggcctgac caagctggcc gggcccaggg
     1741 gcggcgagcg gcgcgaatgg ggcatcaatt tggtgttcga ctggcaggcc gccgaccgcc
     1801 tgaaaatctc cgccggcatc cgctaccaca acttccgggg cttcgatacc gccctggccg
     1861 aagggcgtgc ccgccgcgac ccgcgctatc aggcaggcga tggaacccag cattatgccg
     1921 atggtgccta tctgccgtat ttcgaactgg caggcgatca ggagcggcgt gactggaatg
     1981 tggtggccga acagcttcgg caggcgtatc agtcaggcga tgctgccgcc attgccgcgg
     2041 cagtacaggc agaacaggcg cacggcgccc gttaccattt gctgaaatac tatgacggct
     2101 cgtatcgtac cgatggttat gtgtatatcg gcaacgatgg ccgtgcctat tttgacggac
     2161 ggttcggcgg ggttaacgag gcacagaacc aaccgctcta tcgggtgcgc cccgtttatg
     2221 tgccgtttgt caacggcaag ctggacagcg gcgcattgcc ccagcatttt catgatttcg
     2281 tcagcaatta tcaggaaaaa gtgaccaatc cgcaggggct gcacgggacg cattatcgat
     2341 attgggcagg cgtggggaat cctatcgact gtataagaag tgatgcggcc tcttgccttg
     2401 ctcataacct atcgggaaaa gtaaccaatt ttcaagtcgg ctatcccgag tacggtgatg
     2461 ataccggtct cggtctcaaa atcatcggtc ggcactatac cgaggaacag tattgggcgc
     2521 agcccaaacc gatccgtgcc catgcctggg cgccgaccat cgccgtcagc tacgatctga
     2581 ccgacaacag ccgcctgttc gtacgctatg cgcagatgag ccgcttcccc agcgtgtatg
     2641 aggtgggcag tttttataac gacgtggcct atgccggtat gccgaaggcc ccaaatttcc
     2701 gcttcaagcc ggaacgcagc cgcagctggg aaatcggcta cagcttcaat tttgccccgt
     2761 attggagccg gctgcgtgcc ggcgatatgc gcctgaccta ctaccgcaac cgtatccaaa
     2821 atgtgatcga aaccacagat tatttccgca ccgtgcaata cgaccgcaag gacaccgccg
     2881 ggctggaatg gcagagccgc atcgacaccg gccgcttctt tgccgcgctc ggtgccacct
     2941 accgcctgaa acagcagatg tgtgaccgcg ataccgcttt cgattacgac ccttatggtg
     3001 ccaaaggcgt gccgatctgc atcgaaggcg gctacggcag tacgcgcggc tatcaggcct
     3061 tgcagccgaa atattcaata aacctggatg ccggggtgcg cctgttgggc gagaaactgg
     3121 agctcggcct gcgcggcatc taccacagcc gggtcaacac caagcaatac gaccaactgc
     3181 tgcaaaagga tttgggcatc atcttcgata ccaccggcaa gccccaccat tggcggtcat
     3241 cgctgacttg ggatgtttat ggccgctacc ggctgcacaa aaacctcaac gtcaacctcg
     3301 gcatcaccaa cctgaccaac cgctactatc tcgacccgat gtccaacgtt gccgcccccg
     3361 ggccgggccg gacggttacc tttgggctga ctgccaagtt ctagccgcag ggcggagtgg
     3421 ggttttcagg tagcctgcgg gtatggcggg aaggctacct gaaaacggat tggatataac
     3481 aacaaacaat tgaacactcc ggacgcacaa acccaaccgg ccccgcttat ccgaggtaat
     3541 ggtttttacc gttttttccg ccggttcggc ggtaataaaa cggtggcttt tgtttaactc
     3601 ttaattaagg aaacgattat gtctatacgt aataaaaccc tgttggccgt cttgctgtgc
     3661 ggcgtttttg gtgtggctgc ggctgctccg gctggtggtt ccagccaaag gaaaagccaa
     3721 gatccaaata gtgacccgac gacagttcgc cccggcacct ctgacaagca acctttcggt
     3781 gccggtaagg ccggtttggc attcagtatc aataacggtg gaagttggtc gaaatccatc
     3841 aatctggatg atggtccggt caaatatatc cgtgcgaaat atcaggcacc gattaacggc
     3901 aacgatccct atgctaatgt tgatggtacg cgcaatctgc aatatctgcg cttaggcgat
     3961 gtgaaaccgg ttatcggctg gttctacaac ccaacgttgg gtcaggtgtg gtatgaaaac
     4021 caccacaaca acactgaagt gtacagtgtg cgccagatag ccaacccggc aatccccgcc
     4081 gcacccaagt tcggcggcct ggtaatcgcc aaagtgccgg gcatgggcgg cagcaacggc
     4141 aacgtcttct tcggcgaatg ggcgccgcgt gccggtaacc cgcagcaaat cagcaccgac
     4201 ctgaatatgg cggatggtaa acgcaccgtt tggtatgtgg gcgataatcc caccggcaac
     4261 accaccggtg tgagaaccgc cacctacaat gtgctgggta tcaataagca caccccgggg
     4321 cagaacgatt tctataccgg tcaggtaacc gccaccttcg gttctggtat aaccgggacg
     4381 atggcaggca gaatcagccg cagttccgat cacgtcgatt ttgatcacgc caaaatcgat
     4441 aacagaaatg gtacctttgc cgatcccagt caaggcatga ccggccgctt ctacggcaac
     4501 caggcggcag ccatggccgg ctataccaca cgtggtaccg gtaatgtcgg cgatgacgta
     4561 gctttcggcg gtagcgccac cgatattgag acccgcaaat aacagctgcc atccgatttg
     4621 gtttggcaac ggctaggctc gatttaaccc ctgaggagtt tcaagctgcc gttttatgcc
     4681 gactgccaag ccatataaat catccgtccg atacggattg ctgctcggtt tcaggtagcc
     4741 cgtgttcaac acaggctacc tgaaatttga tatttgtaaa taaacatcgc ctatcccata
     4801 cggtttcggc ctatcggaca ttttgggaca gcaattaaaa cctgcgttac tttatctttt
     4861 cggaaggcaa ccatgaacaa accactcagc ctcgccctct tctgcctgct tctgcccatc
     4921 accgcccacg ccgacaaccc cgccgacgaa cgccgccgcc tgctggacga gggcagccgc
     4981 caaacgcagc aataccgcga aagcggttgg ctggacacgg aacaggcacg cggggaagta
     5041 gaggaaaacg acggctatat ttcgataggc ggcgaaatct accaagtcgg cgatacggcg
     5101 gaagaactgg aaagcgcaat ttaccacgcc ctcaatgcgc ggcagtggca caaggtgcgg
     5161 cagttcgccg cccgctacgc caaactgccc cggcacaagc ccgcgctgat tcatttggcc
     5221 gatgcgctgc aaaaacggga cgaaggggat ttccgcgcgg cggggaacag ttttcagacg
     5281 gccttggaag ccgaacccga caacccgcgc ctgctgctcg aagcggggcg gttttatgcc
     5341 gaagacaacc aaaacaaaga gtctgccgcc gcgtttgaga aagttctgaa aacggacatt
     5401 cccgcagaaa cccgccccat cgtggaaaac tacctgtccg aactgggcaa acgccgccgc
     5461 tggcacggcc aaatcagcct cggctacggc tataacagca atgtaaacca aggcaacggc
     5521 atcaaccaat gcgtgtggga aattgcgggc atgtgcctga tggagcgcac cctgcccgcg
     5581 ccaacggatt cgaccttctc atcctatagc gcgaccgccg aaaaaaccgt cccgctcaaa
     5641 gggcatcacg gcgtacaggt gcgcggtgta ctgtacggca accgctacac ggaaaaagac
     5701 aaagattcgg cggccatgcc ggattacggc tatcgcaacg gttcgctgta cgcgggatac
     5761 gcctatgccg acgcacgctc ctccttttcc ctgctgcctt atttcgaata cgacttccgc
     5821 aaccgccaca cccactaccg cgcatggggt gcggatgccg actggtcgcg cacactctcc
     5881 ccgcactggc gcattaactc acatgccgga gcaaaaaaga ccggatacgg cggacaaagc
     5941 aaaacttatt ttgccgattt caaacaatac gaactcggcg cgggggcgga attttccatc
     6001 acgccgaaaa gcggcctgct tgtaaatttc gatgccgcac gcaaagccta tcccgaaaaa
     6061 tcctcttcca gcaaagaata tacggctcgg ctgggcgcgt ataggctttt ttcgggcggt
     6121 acttatttaa acgccgtcct gctctaccgc cgcagcctgt atgacgcggc aagtttcgtc
     6181 agcgataaca aacggcggag cgacaagcaa tacatcatga tggctgcggc gggttttccg
     6241 caatggaata tcaaaggcgt atatcccgaa ctgcgtttca ggcgaacaat cgcacacagc
     6301 aacgcggtgt attaccgcta ccgccaaaac gaatggctgt tgggttttaa atatcggttt
     6361 tgaccagtcg ggtgataaaa aatgccgtct gaaagggcgc ttcctttcag acggcatttg
     6421 tccgtaatgt ttacagatga ggattcatca ggttctcggg ggagaggatg cggttgagtt
     6481 cttcttcgct caacaacccg cgttccagta cgacttcgcg cacgcctttg ccggtttggg
     6541 cgcagatttt gccgaccaag tcgccgttgc ggtggccgat gtacggattc agataagtca
     6601 ccagcccgat ggagttgaaa acgtaacgtt cgcagatttc gcggttgacc gtaatgcctt
     6661 tgacgcattt gtcggatagg ttgactgcgg cattgcccaa gagggaaatg gtttcaaaca
     6721 tacattgggc gatgaccggc tccataacgt ttaattgcag ttgcccggat tcggcggcga
     6781 aggtaatcgt cgtatcgttg ccgatgactt tgaagcagac ttggttgacg acttcgggaa
     6841 tcacgggatt gactttggca ggcatgatgg aagaaccggc ctgcaattcg ggcaggttga
     6901 tttctttcaa accggcgcgc ggaccggaag agagaaggcg caaatcgttg cagattttag
     6961 agagtttgac ggccgtgcgt ttcaatgcgc cgtgtaccat cacatatgca ccgcagtcgg
     7021 aggtcgcttc gatcaggttt tcagtcagtt tgcaaggcaa gccgctgact tcggagagtt
     7081 ttttgaccac cagttcggca tagcctttgg gcgtgttcac gcccgtgccg attgccgttg
     7141 cgcccaaatt gacttccaag agcagttggc gggtgcggtc aaggttgagg atttcctctt
     7201 ccaacaatac ttggaaagat tggaattcct ggcctgccgt catcggtacg gcatcttgaa
     7261 gctgggtgcg acccattttc aaaacgtctt taaacgcttc ggctttggcg gcaaaggcgt
     7321 ttttcaatac ggtcagtttg tcgagcaatt cgccgatgct gtaatacacg gcaaggcgga
     7381 agcccgtggg ataggcatcg ttggtggatt ggctggcgtt gacgtgatcc atcggattga
     7441 cgatgtcgta gcggcctttc tcatagccca aggcttccaa tgcaaggttg gcgatgactt
     7501 cgttggtgtt catattgacc gaagttcccg ccccgccctg atacacgtcg gacgggaatt
     7561 ggtcgaggca gcggttgttc agcagaactt cgtcgcaagc cttttcaatg gcggcggcga
     7621 tttcgggttt tactgcaccc aattcgccgt ttgcctgcgc ggttgctttt ttcaccatca
     7681 ccatactgcg gacaaactgc ggcacgtcgg aaattttttg tgtggagatt ttaaagtttt
     7741 caatggcgcg cagggtgtgg atgccccaat acacttcggc gggaatctcg cggtcgccca
     7801 ataaatcgtg ttcgatacgg acagtcatgt ttttaccttt gtaagtcgga taattaatat
     7861 tgaaaaaatg cgccatcgga aagatgccgc agcaggacga acactatacc ggccggatga
     7921 aattgt
//
LOCUS       DAXGCP010000091         7846 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.091, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000091 DAXGCP010000000
VERSION     DAXGCP010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7846
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.091"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..217
                     /locus_tag="ACFJCW_001815"
     CDS             <1..217
                     /locus_tag="ACFJCW_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4151888.1"
                     /translation="RCRINRSKEFADRRNHINGIGSFWNQAKRALRKYNGIDRKPFPP
                     LLRECEFRLNFGTPSRQLKILRDWCGI"
     gene            complement(291..1712)
                     /locus_tag="ACFJCW_001816"
     CDS             complement(291..1712)
                     /locus_tag="ACFJCW_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HFC4151889.1"
                     /translation="MRHLPLFSLMLFPASVYAADSDGANLNLLWGLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQDRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILITLTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINTMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGPLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLVFFVFKLL"
     gene            complement(2071..2430)
                     /locus_tag="ACFJCW_001817"
     CDS             complement(2071..2430)
                     /locus_tag="ACFJCW_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HFC4151890.1"
                     /translation="MIRYLLIACGGISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLMMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(2427..3032)
                     /locus_tag="ACFJCW_001818"
     CDS             complement(2427..3032)
                     /locus_tag="ACFJCW_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 family protein"
                     /protein_id="HFC4151891.1"
                     /translation="MTIMNIDTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDGFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVVENGLEGIVQIAPFHPYFQFEGTDSDGIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDASAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(3079..3561)
                     /locus_tag="ACFJCW_001819"
     CDS             complement(3079..3561)
                     /locus_tag="ACFJCW_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HFC4151892.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      3765..3862
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            4073..5173
                     /gene="gcvT"
                     /locus_tag="ACFJCW_001820"
     CDS             4073..5173
                     /gene="gcvT"
                     /locus_tag="ACFJCW_001820"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HFC4151893.1"
                     /translation="MTALKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVVGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPDTEAVAFFKALQTA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGRTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLIRGKEADVRVLKLPFVRSGQKQFD"
     gene            5320..5859
                     /locus_tag="ACFJCW_001821"
     CDS             5320..5859
                     /locus_tag="ACFJCW_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151894.1"
                     /translation="MFFDTEGKSHTAIFMKIVGGNGKIAGEVVIDGEYALDIVRMNDD
                     LSIAVQDNKGRSRASDLEALSQAKSFTLIAFSRYAGTVEVDKVSAVTGICADYRSKGL
                     KVAVADNMRPKQEIVVFRASGVMASNKRKINEAYLDYSASSKLPSAQKQELEQDKNNM
                     IAVHYGRLEELIARGICVR"
     gene            5911..6297
                     /gene="gcvH"
                     /locus_tag="ACFJCW_001822"
     CDS             5911..6297
                     /gene="gcvH"
                     /locus_tag="ACFJCW_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HFC4151895.1"
                     /translation="MSNNIPTELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQSGVVESVKAASDVYAPIAGEVVAVNDDLPGAPETANSDPYGAGW
                     FFKIKPANPADYDGLLTAEQYAGEVD"
     gene            6450..7697
                     /gene="hemA"
                     /locus_tag="ACFJCW_001823"
     CDS             6450..7697
                     /gene="hemA"
                     /locus_tag="ACFJCW_001823"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HFC4151896.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAAALPEAVRNLARSNAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEIRPYLYTLDMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRAAQEQESMGAKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKNPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
BASE COUNT         2016 a         1876 c         2183 g         1771 t
ORIGIN      
        1 ccgttgccgc atcaaccgtt ccaaggaatt tgcagaccgt cggaaccaca ttaacggcat
       61 tgggagcttt tggaatcagg caaaacgcgc cttgcggaaa tacaacggaa tcgatcgtaa
      121 acctttcccg ccgttgttga gggaatgcga atttcgactt aacttcggca caccgtcccg
      181 gcagctaaaa atcctgcggg attggtgtgg aatttaggga taatctagta cagccccttt
      241 gattatgccg gaatttaaaa tgccgtctga atgttcagac ggcatagcgt ttacagtagt
      301 ttgaaaacga aaaagacgag ggtatgtacg atgaagacgg gtgtcaggaa ggcgaccgac
      361 cacatcatat agccgaagaa agtcggcatc ggtacgccgc gctgttcggc aatggccttg
      421 accatgaagt tcggtgcgtt gccgatgtag gtcagtgcgc ccatgaatac cgaacccata
      481 gaaaccgcca gcagcgaatg aaacagggga cccgtcatta aggcttgggc atcgccgccc
      541 gccatattga aaaacacgag ataagtgggc gcgttatcca agaatgccga caatatgccg
      601 ctcatccaga aatacatcgt attaatcgga tgacctgccg tatcgtgaac cagcgatacc
      661 accccgccca gcgcgcctgc ctcgcctgct ttcagaatgc tcaggacggg gaagatggtg
      721 atgaagatgc cgaggaagag tttgcccact tcggcgatgg gttcaaagtt gaattcgttg
      781 cctgcgcgga cttgtttggg cgtgattgcc atagatacgg cggtcaatgt aatcaggatg
      841 acatcgcgga caaggttttg cagggcgtaa cggctgccga ggatttcaaa tcccgggtgt
      901 tcgggtttcc aaaggccgga cattagaacc gcgccgacca cgcccgaaag caggaggaag
      961 ttccatttgc cgaagatggc gattttttcg ggtttttcct gttgtgccgg cgtatcttgt
     1021 gcaatgcttt cctgtttgaa gaaacggttg tcgatgaaat agaaggcggt caacaggaca
     1081 gcggtgctaa tcaggacggg ggcgaacata tgtttgaccg tccacatgaa atctacgcct
     1141 ttgaggaagc cgaggaagag tggggggtcg cccaaagggg tcaggccgcc gccgatgttt
     1201 gcaaccagga aaatgaagaa gatgacgatg tgcacgcggc gggtacggtc ttggttggct
     1261 ttcagcagcg gacgaatcat cagcattgcc gcgccggtcg ttcccatgat agaggcaagt
     1321 gccgtaccga cggcaagcag ggcggtgttg agcttgggtg tgccgttcaa gtcgccccaa
     1381 accaaaatgc cgcctgaaat ggtgtacagg gcaagcagca gcaggatgaa ggggatatat
     1441 tcttcaacga gtgcgtgtgc gacggtatgg ataccggcgg acgcgccaaa aaccaaactg
     1501 aacgggatga ggaagagcaa tgtccaaaag gcggtgattt tgccgtaatg gtgatgccag
     1561 gtatgcgaaa aaaacaaggg acccaatgcg atagacagca aaatcagggc aaagggcaag
     1621 ccccacagca ggtttaggtt tgcgccgtcc gaatctgcgg cgtaaaccga tgccgggaaa
     1681 agcattagtg aaaacagggg taggtggcgc atcgtgtttc ctcgattcaa gcactgcctt
     1741 gcgcggcgca cgggagtgat acaggcttcg tgccgcccgg acataggcgg actgtgctgc
     1801 ctgtttgttt ttgaaaaaag ttttccgatt gattgtaaag taaataatca ggataaacca
     1861 gtttcccaaa ccggaaggcg gcgggaaggc ggattgccgt gcttgggaat atatgttctt
     1921 tttgataaat aattttattt aaaacaaata aatatatgtc tttaataaat aatctgtcga
     1981 aaacgaaaaa taaatttatt ttaacatata tttgcaatga aacaggtttg ccccacccgt
     2041 ttgtttgccc ttatcccttt cagacggcat tcaagattcg ggtctgcgcc acatccatat
     2101 ggcgacaagg gaacaaaaaa ccgatgaaac cgccccgacc caccagcgtt ggggaaactg
     2161 ccaaaacatc atcaggcagg atgcggtcat catgctgatg gcgaaaatct tggctttgcg
     2221 cggcactgcg ccgttttgtt cccagttatg aaccatcggg ccgaaatagc ggtgccggtg
     2281 cagccagcgg tgaaagcgcg gggatgcctt tgcccagcag gcggcggaga gtagtacgaa
     2341 cggcgtggtc ggcaacagcg gcaaaaaaat gccgattatc cccaacagca gggagatgcc
     2401 gccgcaggca attaaaagat aacggatcat tttgaaatat ttttcttatt gtgcggataa
     2461 gggcaggatg tgataccgag ttttgcccag ccttcatgtc ccattttttc cagcagggcg
     2521 atattgcgtt cgaatattgc cgaagcgtcg ggaaaggctt gtgcggcttt ggcaatgctg
     2581 tcttcgcgga tgaggtgcag cgtcggatag ggagaacggt tggtgtagtt gccgatgccg
     2641 tctgaatccg tgccttcaaa ttggaaatag ggatgaaacg gggcgatttg gacgatgcct
     2701 tccaagccgt tttcgacaac ggcggcatcg gcaatgtcga gcatatcgtt gaatacgtcg
     2761 aaatcgggga atagggtcgg gtgaaccagc agggtggttt ccagttcggt ggcgggtgta
     2821 ttgcccagtc gctgcagttc ttcgtccaag tcttccaaaa aaccgtcaag gtgtttggct
     2881 tcgctgatcg cgatgcggac aaggttttta acgtgggggg ctttggcaaa gggacacagg
     2941 ttcagaccga tgacggcttt ttccaaccat tgtccggtgt gttcggcaac agcatcttta
     3001 ttttcggaag tatcgatatt cattattgtc atgtaaatgt gtttgcagag tgcacgtgcg
     3061 ggaaaatcgg gaagggcact attccttcag caggtggttg agcggcaggg aggtggtgtg
     3121 tttgatttct tttaaaacaa agctcgattg cgcatcctgt acgccgtggt gggataaaag
     3181 cgtatccaaa acaaaatggg aaaacgcgtt catatcggta aaaaatgcct gaagcaggta
     3241 gtcggtctcg ccggttaggg cgaagcagct caagacttcc ggccattttc gaaccgatgc
     3301 ggcaaaatct tcccgcgcgt cttttgcttt gcggatggaa acgcggataa atgcctgaag
     3361 acctaagttg acggattccg gagacagcag cgcggcatat tggcggacga tgccggcatc
     3421 ttccaactgc ttcagacggc gcaggcacgg agaaggcgaa agtgcgacac gttcggacag
     3481 ttcgacattg gtcagcctgc cgttttcctg gaggacctgt aagattttaa tatcggtttt
     3541 gtctaaagtg agttggggca tatttgcgtt ccgttttaag gaattcggat tgtctgtccg
     3601 tatgtttgcg gcaatccgca tagatggaga ccatattaac atataaaaag ttataccgtc
     3661 atccgggaca aattttgttt tcggaaaatc atgtgaaaac agaggcggtc ggtttgcatc
     3721 tcttttaaga cggcttgccc aaaccgccga ttcaagacat aatcgggaaa tgtgcaggag
     3781 agtgttacac ccaactacaa tgtaaccacc gaaggcgcag acacccttaa atcgctcagg
     3841 tatcagggac tgcacattga aacaaacaat ctggagagcg gcgttagaat aacgtccacc
     3901 gaaggggaga aggccgtctg aaccaccatt cagacaaccg cgcaaagcag tgagcagact
     3961 ggtttgccat catgcggata cggccgaaaa tctcaggttc aaggacagat agggtcatcc
     4021 gcgcacaggt gcgcgggcgg catctgaaca aaaaatccgg agaaacttga gaatgactgc
     4081 tctgaaaacc accccgtttc atcaagccca tcaagatgca ggcgcgaagc cggtagattt
     4141 tgccggctgg gaactgccca tccattatgg ttcgcaaatc gccgaacacg aagccgtgcg
     4201 caccgacgcc ggtatgtttg acgtatccca tatgctcgtt accgacgtcg tcggagcgaa
     4261 cgccaaagcc tttttccgca aattgattgc caacgacgtt gccaaactcg cttttgtcgg
     4321 caaagccctt tattccgctt tgctcaacga caacggcggc gtgattgacg acttgatcgt
     4381 ttaccgcacc aacgaggccg aaacccaata ccgcatcgtg tccaacggtg cgacccgtga
     4441 aaaagacacg gcacaattcc acaaagtcgg acaagagttc ggcgttgcct tcaatccgcg
     4501 ctacgacctc ggtatgcttg ccgtacaagg tcctaaagcc attgaaaaac tcctgaccgt
     4561 caaacccgaa tgggcggatg tgattcacgg cctcaaaccg ttccaaggcg cggatttggg
     4621 caacgactgg tttgtcgccc gtacaggcta caccggcgaa gacggcgtcg aagtgattct
     4681 gccggatacc gaagccgtcg cattcttcaa agccctgcaa acagcaggcg tacagccttg
     4741 cggcctcggc gcgcgcgaca ccctgcgcat ggaagccggt atgaacctct acggcaacga
     4801 tatggacgac gacaccagcc cgctcgaagc aggcatgggc cggacggttg atttgaaaga
     4861 cgaaagccgc gattttgtcg gtaaagccgc cttgttggca ttgaaagaaa aaggcgttgc
     4921 cgtcaaacaa gtcggtttgc tgctcgaaaa aggcggcatc ctgcgcgcgc atatggaagt
     4981 gttgaccgac aaaggaaaag gcgaaaccac cagcggcgta ttctcgccca gcctgaaaca
     5041 atctatcgcc atcgcccgcg taccgaaaga ttttgacggc gataccgcca aagtcctgat
     5101 tcgcggcaaa gaagcggacg tgcgcgtact gaagctgccg ttcgtccgca gcggtcaaaa
     5161 acagtttgat taatatcggt tcagacggca tttgtttgaa ttaagccgtc tgaaagcagg
     5221 ttttaaggaa ttgttatttc ctatgaaagc aaattttggc agtttattgt tgttattgat
     5281 gttatcggct tgcgcttcgt cgccggcgag cgcggattga tgtttttcga tacagaagga
     5341 aaatcccata ctgcaatatt tatgaaaatc gttggcggca atggaaagat tgccggcgag
     5401 gtggtgatag acggggaata tgctcttgat attgtccgca tgaatgatga tttgagtatt
     5461 gccgtgcaag ataataaggg tagaagccgt gcttccgacc tggaagcatt gtcgcaagcg
     5521 aaatcattta ccctaattgc gttcagccgt tatgcgggca cagttgaagt ggataaagta
     5581 tcggctgtta caggcatttg tgcagattac cgcagcaaag gcctgaaggt tgccgttgca
     5641 gacaatatga ggcccaaaca agaaatcgtt gtattccgtg caagcggcgt aatggcaagt
     5701 aataagcgca agataaacga agcatatttg gattattctg catcctctaa actgccttcc
     5761 gcccaaaagc aagaattgga acaagataaa aacaatatga ttgccgtcca ttacggacgc
     5821 ttggaagaat taatcgcacg aggtatctgc gtacgctaag ttgtgcagat gccgtctgaa
     5881 aataaccccc taccaatgga gaatcaaacc atgagcaaca acatcccaac agaactgaaa
     5941 tacgttgcca gccatgaatg gctgcgcctt gaagaagacg gtaccattac cgtcggtatt
     6001 acccatcacg cgcaagagct gttgggcgac atcgtgtttg tcgagctgcc cgaagtcggt
     6061 gcgaacctcg ccgccgaaga acagtccggt gtggttgagt ctgtaaaagc cgcatccgac
     6121 gtgtatgcgc cgattgcggg cgaagtcgtt gccgtcaacg atgacttgcc aggcgcgccg
     6181 gaaaccgcca acagcgaccc ttacggcgca ggctggttct tcaaaatcaa acctgccaat
     6241 cctgccgatt acgacggtct gctgactgcc gaacaatacg cgggcgaagt ggattaaacc
     6301 gcccgtttgt ccgacggcaa ccgtcggaca aacggaaact gcaccttcag acggcatttc
     6361 tgcggtcgga ggtgcagttt ttttgtccgt gttttaagga tgcagttagg ctataataac
     6421 ggtctatatc catcttcacc gattttttca tgcaacttac cgctgtcgga ctcaatcatc
     6481 aaaccgcacc tttaagcata cgggaaaagc tggcgtttgc cgccgccgcc ctgccagaag
     6541 ccgtccgcaa tcttgcccga agcaatgcgg caacggaggc ggtaatcctt tctacctgca
     6601 accgcaccga gctttactgc gtcggcgatt cggaagaaat catccgatgg cttgccgatt
     6661 accacagttt gccgattgaa gaaatccgtc cgtatctgta cacgctggat atgcaggaaa
     6721 ccgtgcgcca cgccttccgc gttgcctgcg gcttggattc gatggttttg ggcgagccgc
     6781 agattttggg gcagattaaa gatgcggtgc gtgcggctca agaacaggaa agtatggggg
     6841 caaaactcaa tgccctgttc caaaaaacct tttccgttgc taaagaagtc cgtaccgata
     6901 ccgctgtcgg cgaaaattcg gtttcgatgg cttccgcgtc cgtcaagttg gcggaacaga
     6961 tttttcccga catcggcgat ttgaacgtat tgtttatcgg cgcaggcgaa atgattgagc
     7021 tggttgccac ttattttgcc gccaaaaatc cccggctgat gacggttgcc aaccggacgc
     7081 tggcgcgtgc acaggagttg tgcgacaagc tcggtgttaa cgccgaaccg tgcctgctgt
     7141 ccgatctgcc tgccattctg cacgattacg acgtggtggt ttcttcaacg gcgagccagc
     7201 ttccgatagt cggcaaaggc atggtcgaac gcgcattgaa acagcgtcag agtatgccgt
     7261 tgttcatgct tgacttggcc gtgccgcgcg atattgaagc ggaagtcggc gatttgaacg
     7321 atgcgtatct ttatacggtg gacgatatgg tcaacatcgt ccaaagcggc aaggaggcaa
     7381 ggcagaaggc cgccgccgcc gccgaaacgc tggtgtccga gaaggttgcc gaatttgtca
     7441 ggcagcagca gggcaggcag agcgttccgc tgattaaggc cttgcgggac gagggcgaga
     7501 aagcgcgcaa gcaggtgttg gaaaatgcga tgaaacagct tgccaaaggc gcaacggcgg
     7561 aagaggtttt ggaacggctg tccgtccaac tgaccaacaa gctgctgcat tcgccaactc
     7621 aaaccttgaa taaggcgggg gaagaagata aagatttggt tcatgccgtc gcgcagattt
     7681 atcatttgga caaataacgg tgcgccggaa aaggatgccg tctgaagggg tttcagacgg
     7741 catatttttg tgccgcctga caacatcgtg aaatcccaca ttatatcgat gtaattacaa
     7801 agtattatcc tatatgcgga ttggttttaa gatttgtaaa tttgat
//
LOCUS       DAXGCP010000092         7781 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.092, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000092 DAXGCP010000000
VERSION     DAXGCP010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7781
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.092"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            74..823
                     /locus_tag="ACFJCW_001824"
     CDS             74..823
                     /locus_tag="ACFJCW_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC4151897.1"
                     /translation="MKKWTRDETLVALYLYYIIPFQKVSKDNPVIQEYAEILGRTPSA
                     LGMKIGNLGRLDPTLKVKNISGLSNGSKMDVVVWNEFSGDWEQLNKEFEGVISQYQSN
                     DENSNIEIESPEIPKGRERFARISVRVNQGFFRSSVLAAYNNQCCITGLKQPELLVAS
                     HIKPWREDKDNRLNPRNGLCLNALHDKAFDRGLLGIDENFKIIFSPLLAKTEGFDDLF
                     KPYENRMIRLPERLNPSLEFLKFHRENIFQS"
     gene            914..3277
                     /gene="pheT"
                     /locus_tag="ACFJCW_001825"
     CDS             914..3277
                     /gene="pheT"
                     /locus_tag="ACFJCW_001825"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HFC4151898.1"
                     /translation="MQFSYSWLKTQANPDLSADKLEHLLTMAGLEVEEIDTAAPAFSG
                     VVVAEVKSVEKHPDADRLNVTQVDAGTGELVQIVCGAPNVKPGIKVPCSLPVAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDMLFT
                     LKITPNRADCLSVKGIAREVSALTQCAFTPVEIQTAPIGSEKKQAVRIDAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LIVRRAQNGETLACLNEKTVTLADNTLVVADEKGALSLAGLMGGAASAVSDGTQNIVL
                     EAAWFEPEIIVGKSRQYGFGSDSSFRFERGVDYRLQADAIERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLGRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRITAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMSELPETRRPRFAVYNEMAARGYRE
                     VISYAFVDEQWELDFAANAAPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIACVFGKGSDGRFVQNERIGGLWYGAAMPEQWGEKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEVMNHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGVATEAGARLRS"
     gene            3351..3653
                     /locus_tag="ACFJCW_001826"
     CDS             3351..3653
                     /locus_tag="ACFJCW_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HFC4151899.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR"
     gene            3637..3945
                     /locus_tag="ACFJCW_001827"
     CDS             3637..3945
                     /locus_tag="ACFJCW_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151900.1"
                     /translation="MTNNVDLTIPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLKSTFAPYAEGAESGSDGNRPVTLQEIGDGLKDLLEDLDKELC
                     "
     gene            4121..4606
                     /locus_tag="ACFJCW_001828"
     CDS             4121..4606
                     /locus_tag="ACFJCW_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HFC4151901.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAVKSSGKVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFFHDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
     gene            4798..5022
                     /locus_tag="ACFJCW_001829"
     CDS             4798..5022
                     /locus_tag="ACFJCW_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151902.1"
                     /translation="MSVWDIWDRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMPESPDFANAVAMAVAMICIVFIYD"
     gene            5240..6541
                     /gene="bioA"
                     /locus_tag="ACFJCW_001830"
     CDS             5240..6541
                     /gene="bioA"
                     /locus_tag="ACFJCW_001830"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HFC4151903.1"
                     /translation="MPSEHQHTSSLLNFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLIDGMSSWWCAIHGYNHPVLNQAVENQMKQMAHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYQQARGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPKNRFDDEWDGADLQPVRALFEAHHVDIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELEKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGILTKLADKTVQILKEHSK"
     gene            6538..7185
                     /gene="bioD"
                     /locus_tag="ACFJCW_001831"
     CDS             6538..7185
                     /gene="bioD"
                     /locus_tag="ACFJCW_001831"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HFC4151904.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADEQRLTMPEIFSYPASPHLAARLDGRGLDLDKIRTAT
                     QELAAQYEVVLVEGAGGLMVPLTEKLLTIDHIQQQAYPVILVTSGRLGSINHTLLSFV
                     VLKQYGIRLHSLVFNHIHDSRDAHVAQDSLNYLQCRLKADFPEAEWMELAKTGAV"
     gene            7200..7676
                     /locus_tag="ACFJCW_001832"
     CDS             7200..7676
                     /locus_tag="ACFJCW_001832"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HFC4151905.1"
                     /translation="MEHLFGKWLPDLPAPVSDGIDLPMSRLLKARSLTAALCALPHTF
                     SVELLKLGEAETEYGRRRVRDVLLKLDGTAVVQARSACSVGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVSSEGCGRYFAARRSRFSHQGEEMLLTEYFLPELKRFIG"
BASE COUNT         1955 a         1679 c         2183 g         1964 t
ORIGIN      
        1 aatatgttca gggaataaga aaatctgtat tgtacgattt ccttatggaa aatcagaaag
       61 atagctgata aaaatgaaaa aatggactag agatgaaacc ctggttgccc tttatcttta
      121 ttacatcatt ccttttcaaa aggttagtaa ggacaatcct gttattcaag aatatgctga
      181 aatactgggc aggacaccgt ccgcactcgg tatgaagata ggaaatttgg gtcgtttaga
      241 tcctacgctg aaagtcaaaa atatttcggg attaagtaat ggcagtaaaa tggatgttgt
      301 cgtatggaat gagttttcag gagattggga gcaacttaat aaagaatttg agggagtcat
      361 ttcccaatac caatcaaatg atgagaatag taatattgaa atagaatcac ctgagattcc
      421 aaagggaagg gaaaggtttg caagaatatc agtacgcgtc aatcagggct ttttccgttc
      481 cagtgttttg gcagcataca ataatcaatg ttgtattact ggattaaaac aacctgaatt
      541 gttagttgct agtcatatca aaccctggag ggaagataag gataaccgtt taaacccaag
      601 gaatgggcta tgtttgaatg cgttacatga caaagctttt gatagggggt tgttaggaat
      661 agatgaaaat ttcaaaatta tattttctcc actactggca aaaacagaag gatttgatga
      721 tttatttaaa ccatatgaaa atcggatgat aagactgcct gaaagactaa acccaagtct
      781 ggaattttta aaatttcaca gagaaaatat ttttcagagt tgagtaaata tcaacattaa
      841 ccagaattct aaaacagact gtctgaacga aaattgataa aacaaaagtt aattaattga
      901 ttgagaacat aacatgcaat tctcctactc atggctgaaa acccaagcca atcctgatct
      961 ttctgccgat aaactggaac atcttttgac catggccggt ttggaagtgg aagaaatcga
     1021 tactgccgcc cctgctttca gtggcgtggt tgttgccgaa gtaaaatctg ttgaaaaaca
     1081 tcctgatgca gaccgtttga acgttactca agttgatgcc ggtacgggcg agttggttca
     1141 gattgtttgt ggtgcgccga atgtcaagcc gggcattaaa gtgccgtgtt cgttgccggt
     1201 tgccgttttg ccgggcaatt ttaaaattaa gccgactaaa atgcgcggcg taccatcaaa
     1261 cggtatgctg tgttcgacca atgaactggg tttgcctgat gatggtgtag acggcctgca
     1321 cattctgcct gaagatgcgc ctgtcggtac caacatccgc gaatacttgg atttggacga
     1381 tatgctgttt acgttgaaaa ttacgcctaa ccgcgctgat tgcttgagtg ttaagggcat
     1441 tgcgcgtgag gtttctgcgt tgactcaatg tgcgtttacg cctgttgaaa ttcagacggc
     1501 ccctatcggc agtgagaaaa aacaggctgt ccgtattgat gcaccggctg actgcggccg
     1561 ttttatcagc cgcgttattg aaaatgtcaa cgcgaaagcg gctactcctg attggatgaa
     1621 acaacgtttg gaacgcagcg gtatccgcag catttccgca ttggtggaca ttggcaacta
     1681 tgtgatgctg gaaatcggtc agcctatgca tgttttcgat gctgataagc tgtcgggcag
     1741 tttgattgtc cgccgtgctc aaaatggcga gactttggcg tgtctgaatg agaagacggt
     1801 tactttggct gacaatacac tggtggtcgc tgatgaaaaa ggtgcgttga gcttggccgg
     1861 cttgatgggt ggcgcggcga gcgcggtttc agacggcacg caaaatatcg tgctggaagc
     1921 ggcttggttt gagcccgaaa tcatcgtcgg caaatcgcgc caatacggtt tcggttcgga
     1981 ttcgtcgttc cgcttcgagc gcggcgtgga ttaccgtttg caggcggatg ccattgaacg
     2041 cgccaccgaa ttggttttgc agatttgcgg cggtgcggca ggcgagatgg tggaagcaca
     2101 aggtaaattg cccgaagcca agcaggtcgg attgcgtttg ggtcgtctga aaaccgtgtt
     2161 gggcgtggac attcctgccg aacaggtgga aaccattttg caacacttgg gtctgcagcc
     2221 tgagaaaacg gcggaaggct tccgcattac cgcgccgagc ttccgtttcg acatcgaaat
     2281 tgaggctgat ttgattgaag aaatcggacg cgtttacggc tatgaaaaca tccccgacga
     2341 ttacacgtca ggccgtctga aaatgtcgga actgcccgaa acacgccgtc cgcgttttgc
     2401 cgtttacaac gaaatggcgg cgcgcggcta ccgcgaagtg atcagctatg ccttcgttga
     2461 cgagcagtgg gaactcgatt ttgccgccaa cgccgccccc atccgcctgc aaaacccgct
     2521 ggcggcgcaa tatgccgtga tgcgttctac gttgattggc ggcttagtgg aaattttgca
     2581 aaacaacctg aaccgcaagc aaaaccgcgt gcgcgtgttt gaaatcgcct gcgtgttcgg
     2641 caaaggttca gacggccggt ttgtccaaaa cgaacgcatc ggcggtctgt ggtacggcgc
     2701 ggcgatgccc gaacaatggg gtgagaaaac gcgcaatgcg gatttttacg acatcaaggc
     2761 ggacgtggaa aatctgttga aaaacaaagc ggtcgagttc gttaaaaccg gacatcccgc
     2821 cctgcatccc ggacgtgccg ccaatatcgt ttcagacggc aaagtcatcg gctttgtcgg
     2881 cgaactgcat ccgaaatggc tgcaaaaata cgacctgccg caagcgccgc tggtatttga
     2941 aatcgatatg gcggctgtgt tggaatgcgg gaaaacgcgc tatcgggccg tatcgaaatt
     3001 ccagccggtg cgccgcgatt tggcgtttgt gatgccggaa gttatgaatc atgatgattt
     3061 actgcttgtc ttgaaaggcg cagcaaacaa gttggtacag gaaatcagcg tgtttgacgt
     3121 gtatcgcggc acgggtctgc ccgaagggat gaagagcgtg gcggttaaag tgattttgca
     3181 ggatatggaa aacacgctga cggatgaggc ggtcgagccg cttattggaa aactgattgg
     3241 cgtggcaacg gaggcagggg cgcggcttcg cagttaaaaa ataaatattc gcttgaattt
     3301 taaataaaaa ttggtaataa tccacaactg ttacaacaga aggtaatcat atgacactaa
     3361 ctaaagcaga actggccgat attttggtgg ataaagtcag caacgtcacc aaaaacgatg
     3421 ccaaagaaat tgtcgaactc ttttttgaag aaatccgcag cactttggca agcggcgaag
     3481 aaatcaaaat ttccggtttc ggaaatttcc agttgcgcga caagccgcaa cgcccgggcc
     3541 gtaatccgaa aaccggcgag gaagtgccga ttaccgcccg ccgcgtggta actttccatg
     3601 ccagccagaa actcaaaggc atggtggaac actactatga caaacaacgt tgatttgacg
     3661 attcctgcaa aacgctattt cacgctggac gagttgtgcg gactgttgca aatcagcccc
     3721 tatggttttg cgcaatggca acatgatcac ggtgtggttg tcggttacgg cggagaacgc
     3781 tacacccgtt tggatgtggt gaaactgttg aaactgaaga gcacgtttgc accgtatgca
     3841 gaaggtgcgg aatcgggttc ggacggcaac cgtccggtta cgcttcagga aatcggagac
     3901 ggtctgaaag acctgttgga ggatttggat aaggagttgt gctgatttga gaccggttgc
     3961 aggtatgcag ccggttttgt tttacacgct aaaaataatt attgcgtgat ttcacattgt
     4021 ttcggcttga agcacatggt tttgtaatca tttacaggca gctcgcttgg aatcctgttc
     4081 gggcggtttg ctgtttactt aaatataagg atgacggtca atgagatttt tcggtatcgg
     4141 ttttttggtg ctgctgtttt tggaaattat gtcgattgtg tgggttgccg attggctggg
     4201 cggcggttgg acgctgtttc taatggcggc aacctttgcc gccggtgtgc tgatgctcag
     4261 gcatacgggg ctgtccggtc ttttattggc tggcgcggcg gtaaaaagta gtgggaaggt
     4321 atctgtttat cagatgttgt ggcctatccg ttatacggtg gcggcggtgt gtctgatgag
     4381 tccgggattc gtatcctcgg tgttggcggt attgctgctg ctgccgttta agggaggggc
     4441 agtgttgcag gcaggaggtg cggaaaattt tttcaacatg aaccaatcgg gcagaaaaga
     4501 gggatttttc cacgatgacg atattatcga gggagaatat acggttgaag agccttacgg
     4561 cggcaatcgt tcccgaaacg ccatcgaaca caaaaaagac gaataaatat gaatggaatg
     4621 ccgtctgaag gttcagacgg catttttccg gtttgaaaat atagtggatt aacaaaaacc
     4681 agtacggcaa ggcgaggcaa cgccgtactg gtttttgtta atccactata aatttaatcc
     4741 actataaaat agggctgtaa ccttcaatcg gaatttgttg cctgcgggat atacggtatg
     4801 agtgtttggg atatatggga caggatggtg gaaatctatc ataagtataa gaagccgtgc
     4861 ctggttttag cagtggattt tgtgatgggt atggtattca tagagccgaa tgaggagccg
     4921 tgcatcggca gatgctatgc gcctatgccg gagtcccctg attttgccaa cgctgttgcg
     4981 atggctgttg ctatgatctg tatcgtattt atctatgatt gattgaagcg ttgggcggag
     5041 gctgtgtgaa acggtattgg gcgttgggtc gtctgattcc aatcaggctt gaggaatgcg
     5101 aaacggtgtg cgcttatgtt gcggacgatt tgtttcgcgg tttttcgccc gaaacggatg
     5161 gaaaggtgtg ggaagcggtc tgtcggagta gaatacgctt tttgcgtttg aatgcagtaa
     5221 taagaaaaga gagaaactta tgccgtctga acatcaacac acatcatcat tacttaattt
     5281 cgaccgtacc catctgctcc atccctatac ttccatgacc gatccgcttc ccgtttatcc
     5341 tgtcaaacgt gcagaagggg tgtttatcga attggcggac ggcacgcggc tgattgacgg
     5401 gatgtcgtct tggtggtgtg cgatacacgg ttacaatcat cccgttttga atcaggcggt
     5461 tgagaatcag atgaaacaaa tggcgcacgt gatgttcggc ggcctgacgc acgagccggc
     5521 ggtggagctg ggcaagttgt tggtcgggat tttgccgcag gggctggacc gtatttttta
     5581 tgcggattcg ggttcggttt cggtagaagt cgcgttgaaa atggcggtgc aataccagca
     5641 ggcgcggggt ctgacggcga agcagaatat tgcgacggta cggcgcgggt atcacggcga
     5701 tacttggaac gcgatgtccg tttgtgatcc ggaaacgggg atgcaccata ttttcggcag
     5761 cgcgttgccg cagcgttatt ttgtcgataa tccgaaaaac cgtttcgacg atgaatggga
     5821 cggggcggat ttgcagcctg tccgcgcctt gtttgaagcg catcatgtgg atattgccgc
     5881 ctttatttta gaaccggtcg tgcaaggcgc gggcggcatg tatttttatc atccgcagta
     5941 tcttcgcggc ttgcgcgatt tgtgcgacga atttgatatc gtgttgattt ttgacgaaat
     6001 cgccaccgga ttcgggcgca cgggcaagat gtttgcctgc gaacacgcgg aggtcgtgcc
     6061 ggatattatg tgtatcggca agggtttgag cggcggctat atgacgctgg cggcggcaat
     6121 cacttcgcaa aaagttaccg aaacgatttc acgcggcgaa gcgggcgtgt ttatgcacgg
     6181 cccgacattt atggcgaacc cgctggcgtg tgccgttgcc tgtgcttcgg tcaagctgct
     6241 tttatcccaa gactggcagg caaatatccg ccgtatcgaa agcatcttaa aaggccgtct
     6301 gaaagccgcg tgggacattc gcggcgtgaa agacgtgcgc gttttgggtg ctatcggcgt
     6361 gatagagttg gaaaaaggcg tggatatggc gcgttttcaa gcggattgcg tggcgcaggg
     6421 catttgggta cgcccgttcg gcaggctggt gtatctgatg ccgccctata tcatttcaga
     6481 cggcattttg accaaacttg ccgataaaac cgtgcaaatc ttgaaggaac acagcaaatg
     6541 aaaggcgttt acttcgtcag cggtatagac acggacatcg gcaaaaccgt cgccaccggt
     6601 atgttggcaa aacaattgtt gcagcagggc aaaagcgtga ttacgcaaaa gcccgtgcaa
     6661 accggttgcc aagacatcgc cgaagacatc gccgtccacc gtaaaatcat gggcataccc
     6721 atgcaggaag ctgatgaaca gcgtctgact atgcctgaaa tcttcagtta tcccgcctcg
     6781 ccccaccttg ccgcccgact ggacggcagg ggtttggact tggacaaaat ccgcaccgcc
     6841 acacaagaat tggcggcgca gtacgaagtc gttttggtcg aaggcgcggg cgggttgatg
     6901 gtaccactga cggaaaagct gttaaccatt gatcatattc agcaacaggc ttatcccgtc
     6961 atccttgtta ccagcggacg gctgggaagc attaatcaca ccctgctcag tttcgtcgtg
     7021 ctcaaacaat acggcattcg cctgcacagc ctcgtgttta accacatcca cgacagccgc
     7081 gacgcacacg tcgcccaaga cagcctgaac tatctgcaat gccgtctgaa agccgatttt
     7141 cccgaagcgg aatggatgga gttggcaaaa acaggcgcgg tataaagatt gggaaagata
     7201 tggaacacct atttgggaaa tggctgcccg acttgcccgc ccccgtttca gacggcatcg
     7261 acctgccgat gagccggtta ttgaaagccc ggtcgctgac cgccgcattg tgcgccttgc
     7321 cgcatacatt ttcggtggaa ctgctgaaac tgggcgaagc ggaaacggaa tacggacggc
     7381 ggagggtgcg cgatgtgctt ctgaaactgg acggcactgc tgttgtgcag gcacgaagcg
     7441 cgtgcagcgt cggttcggcg ttttggcaaa acattttgga ctgcggcaca cgccctttgg
     7501 gcgagcgtct gtttcaagcc gatttggaag gggcgcgttc ggcgtttgag tttgccgttt
     7561 ccagtgaagg atgcggacgg tactttgccg cgcggcgttc tcggttttcc catcaaggcg
     7621 aggaaatgct gctgaccgag tattttctgc ccgaactgaa acgctttatc ggataaaata
     7681 ccgttttttc aagctgtgcg gcaacctgca tctaaaccac attttaatat aagagactcc
     7741 aatttagata caggacatgt cgatggtact cacggacact a
//
LOCUS       DAXGCP010000093         7719 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.093, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000093 DAXGCP010000000
VERSION     DAXGCP010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7719
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.093"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            177..1139
                     /locus_tag="ACFJCW_001833"
     CDS             177..1139
                     /locus_tag="ACFJCW_001833"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HFC4151906.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALADAKLNINDIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDKPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAEQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDAGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            1186..1557
                     /locus_tag="ACFJCW_001834"
     CDS             1186..1557
                     /locus_tag="ACFJCW_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HFC4151907.1"
                     /translation="MKRQAFFKPMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWTGAYLGSRMFRHKTAKKRFVVLFRLTVSGNVLA
                     TCILIDYFVPPELFVKLGQHL"
     gene            1583..2509
                     /gene="fabD"
                     /locus_tag="ACFJCW_001835"
     CDS             1583..2509
                     /gene="fabD"
                     /locus_tag="ACFJCW_001835"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HFC4151908.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEHAIVKNTFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEVGGKTPAAVAGHSLGEYTALVAAEA
                     LDFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICAESAQGEVVEAVNFN
                     SPGQVVIAGNAAAVGRTMAAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDAGKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKAAACSALTDAGQITAFIEAH"
     gene            2648..4516
                     /gene="msbA"
                     /locus_tag="ACFJCW_001836"
     CDS             2648..4516
                     /gene="msbA"
                     /locus_tag="ACFJCW_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HFC4151909.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIVAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPDLSAAAGILSTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDNFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDGIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLSALQAANLQSLIDASPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTVESADRIIVMDGGKIIEQGTHDQLMFQNGYYTMLRNISGKDTAAVQTA"
     gene            4616..6181
                     /gene="guaA"
                     /locus_tag="ACFJCW_001837"
     CDS             4616..6181
                     /gene="guaA"
                     /locus_tag="ACFJCW_001837"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HFC4151910.1"
                     /translation="MTQDKILILDFGSQVTRLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSGLTRGIQDDAPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     TEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPGWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            6243..6989
                     /gene="fabG"
                     /locus_tag="ACFJCW_001838"
     CDS             6243..6989
                     /gene="fabG"
                     /locus_tag="ACFJCW_001838"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HFC4151911.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKIIGTATGESG
                     AAAISKRLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDNIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFAKSMAREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
     gene            7054..7531
                     /locus_tag="ACFJCW_001839"
                     /pseudo
     CDS             7054..7531
                     /locus_tag="ACFJCW_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
BASE COUNT         1858 a         2436 c         1898 g         1527 t
ORIGIN      
        1 cgtatcggca accccgcccc gcccgtccac ggcaatccgc atctgaaaac catctgtatg
       61 ccaaaccaca cccccatccc tgtttccgtc atttgcaccc tgcccgtatt gggcaatcat
      121 cggtttttcg cttacaatag ccgaatctga accaactctc taaaaaggcc gttcccatgc
      181 agtatgcaaa aatttccggc acgggcagct atcttcctgc caaccgcgtc agcaatgacg
      241 accttgccca aaaggtagat acctctgacg agtggattac cgcgcgtacg ggcatcaaat
      301 tccgccatat tgcagccgaa aacgaaaaaa ccagcgatct tgcagccgaa gcggcgcggc
      361 gcgctttggc agatgccaaa ttaaatataa acgacattga tttgattatc gtggcgacgg
      421 caacgccgga tatgcagttt ccttctaccg ccaccatcgt gcagcaaaaa ttgggcatca
      481 ccaacggctg ccccgcgttt gacgtgcagg cggtgtgcgc aggctttatg tacgcgctga
      541 ctacggcaaa tgcctacatt aaaagcggta tggcgaaaaa cgcgctggtc atcggcgcgg
      601 aaaccttcag ccgcatcgtc gattggaacg accgcacaac ctgcgtgctg ttcggcgacg
      661 gcgcgggcgc ggtggtttta agcgcgtccg acaaaccggg catcatccac agcaaactca
      721 aagccgacgg caattatctg aaactcttaa acgtccccgg gcaaatcgcc tgcggcaaag
      781 tttccggttc gccgtacatt tcgatggacg gtcccggcgt gttcaagttt gccgtcaaaa
      841 tgctgtccaa aatcgccgat gacgttatcg aagaagcagg ttacaccgcc gaacaaatcg
      901 actggattgt tccccatcag gcaaaccgcc gcattatcga atcgaccgcg aaacatttgg
      961 gtttgagtat ggacaaagtc gtcctgaccg tccaagacca cggcaacacg tccgccgcat
     1021 ccattccgct ggctttggac gcgggcatcc gcagcggaca aatcaaacgc ggtcaaaacc
     1081 tgctgctcga aggcataggc ggcggtttcg cgtggggcgc ggtgctgttg caatattgaa
     1141 accggtgccg tctgaaacag gctttcagac ggcatttccc atatcatgaa gcggcaggct
     1201 ttcttcaaac cgatggcgtg tgcggcattt ctgtccgccg tttcgctgcg cctccccgta
     1261 ttgggcgcgt gttacgcaat attgtccctc tatgcgtttg cactttacgg catcgacaaa
     1321 cggcgtgccg tgcggggaaa acgccgcatt cccgaacacc gcctgctcct gcctgccttg
     1381 ttcggcggtt ggacgggcgc atacttgggt agtaggatgt tcaggcataa aacggcgaaa
     1441 aagcgttttg ttgtgctgtt ccgtctgact gtttcgggca atgtcctggc gacctgcatc
     1501 ctgattgatt atttcgttcc gcccgaactt tttgtaaaac tcgggcaaca tctctgacaa
     1561 tccaacccaa caaaggaata ctatgtcttt cgcattcttc ttccccggac aaggttccca
     1621 aagcctcggc atgatgaacg gctttgccga acacgccatc gtcaaaaaca catttgacga
     1681 agcctccgcc atattggggc aggacttgtg ggcgatgatt aacggcagcg atgccgaaat
     1741 catcggtcaa acagtcaaca cccagcccat tatgctcgcc gccggcgttg ccgtttaccg
     1801 cgcctatttg gaagtgggcg gcaaaacgcc tgccgccgtt gccggacaca gcctcggcga
     1861 atacaccgcg cttgtcgccg ccgaagcatt ggattttgcc gatgccgtca aactcgtccg
     1921 cctgcgcgcc gaactgatgc agtccgccgt accgcaaggc gtaggcgcaa tggcggccat
     1981 tttgggtttg gaagatgaac aggtcaggca gatttgtgcc gaatccgcac agggcgaagt
     2041 ggtcgaagcc gtcaacttca actcgcccgg acaagtcgtg attgcaggca acgccgccgc
     2101 cgtcggacgc accatggctg ccgccaaaga agccggagcc aaacgcgccc tgccgctgcc
     2161 ggtatccgtt ccttcccatt gcagcctgat gaaacccgcc gccgacaaac ttgccgaagc
     2221 actcaaaacc gttgaaatca agcagccgca aatccgtgtc atccacaacg ccgacgttgc
     2281 cgcctacgat gatgccggca aaatcaaaga cgcgctcgtc cgccagcttt acagccccgt
     2341 gcgctggacg gaaaccgtca acgccctcgt ttcagacggc attgccgaat ccgccgaatg
     2401 cggcccgggc aaagtgttgg cgggcttggc aaaacgcatc aacaaggccg ccgcgtgcag
     2461 cgcactgacc gatgccggac agattaccgc ctttatcgaa gcgcactgac ttcgttccgc
     2521 aaaaagcagc ctgccctctt caggctgctt ttcacgtccg aacggcaaac agccgcatat
     2581 ttgcgctata atccatccct accaaaccac cgacagcggc tgccgttgca gttcccgccc
     2641 taccgatatg atagaaaaac tgactttcgg actgtttaaa aaagaagacg cgcgcagctt
     2701 tatgcgcctg atggcgtacg tccgccccta caaaatccgc atcgttgccg ccctgattgc
     2761 cattttcggc gttgccgcca ccgaaagcta tcttgccgcc ttcatcgccc ccctgatcaa
     2821 ccacggcttt tccgcgcccg ccgcgccgcc cgatctgtcc gccgccgccg gcatcctttc
     2881 caccctgcaa aactggcgcg aacagtttac ctatatggtt tgggggacgg aaaacaaaat
     2941 ctggaccgtc ccgctcttcc tcatcatcct cgtcgtcatc cgtggcatct gccgctttac
     3001 cagcacctat ctgatgactt gggtctccgt gatgaccatc agcaaaatcc gcaaagatat
     3061 gtttgccaaa atgctgaccc tttcctcccg ctaccatcag gaaacgccgt ccggcaccgt
     3121 actgatgaat atgctcaacc tgaccgaaca gtcggtcagc aacgccagcg acatcttcac
     3181 cgtcctcacg cgcgacacga tgatcgttac cggcctgacc atcgtcctgc tttacctcaa
     3241 ctggcagctc agcctcatcg tcgtcctgat gttccccctg ctctccctgc tctcgcgcta
     3301 ctaccgcgac cgtctgaaac acgtcatttc cgactcgcaa aaaagcatag gcacgatgaa
     3361 caacgtgatt gccgaaaccc atcagggaca ccgcgtcgtc aagctgttca acgggcaggc
     3421 gcaggcggca aaccggttcg acgcggtcaa ccgcaccatc gtccgcctca gcaaaaaaat
     3481 cacgcaggca acggcggcac attccccgtt cagcgaactg attgcctcga tcgccctcgc
     3541 cgtcgtcatc ttcatcgccc tgtggcaaag ccaaaacggc tacaccacca tcggcgaatt
     3601 tatggcattc atcgtcgcga tgctgcaaat gtacgccccc atcaaaagcc ttgccaacat
     3661 cagcatccct atgcagacga tgttcctcgc cgccgacggc gtatgtgcat ttctcgacac
     3721 cccgcccgaa caggacaaag gcacgctcgc gccgcagcgt gtcgaagggc gcatcagctt
     3781 ccgcaacgtc gatgtcgaat accgttcaga cggcatcaaa gccctcgaca acttcaacct
     3841 cgacatcaga caaggcgaac gcgtcgccct ggtcggacgt tccggcagcg gcaaatccac
     3901 cgtcgtcaac cttctgcccc gctttgtcga accgtctgcc ggcaacatct gcatagacgg
     3961 tatcgacatc gccgacatca aactcgactg cctgcgcgcc caattcgccc tcgtctccca
     4021 agacgtattc ctgtttgacg acaccctgtt tgaaaacgtc cgatacagcc gtcccgacgc
     4081 gggcgaagcc gaagtcctgt ccgccctcca agccgccaac ctgcaaagcc tgatcgacgc
     4141 atccccgctc ggactgcacc agcccatcgg atcgaacggc agcaacttat ccggcggaca
     4201 gcggcaacgc gtcgccatcg cccgcgccat tttgaaagac gcgccgatat tattattgga
     4261 cgaagccacc agcgcattgg acaacgaatc cgaacgcctc gtccaacaag cgctcgaacg
     4321 cctgatggaa aaccgcaccg gcatcatcgt cgcccaccgc ctgaccaccg tcgaatccgc
     4381 cgaccgcatc atcgtcatgg atggcggcaa aatcatcgaa caaggcacac acgatcaact
     4441 catgttccaa aacggctact acaccatgct gaggaacatc tccggaaaag ataccgccgc
     4501 cgttcagacg gcataaacaa aatgccgtcc gaaatggtat aatcgccccg accccttcag
     4561 acggcactat atccgccgac ccatccgatt atcttcaatc actgtaaaac ccattatgac
     4621 ccaagacaaa atcctcatcc tcgacttcgg ttcgcaagtt acccggctga tcgcccgccg
     4681 cgtgcgcgaa gcacacgttt actgcgagct gcattccttc gatatgcctt tggacgaaat
     4741 caaagccttc aaccccaaag gcatcatcct ttccggcggc cctaattctg tttacgaatc
     4801 cgactatcaa gccgataccg gtatttttga tttgggcatt ccggttttgg gcatctgcta
     4861 cggcatgcag tttatggcgc accacttggg tggcgaagtg cagcccggca accagcgcga
     4921 attcggttac gcgcaagtca aaaccatcga cagcggactg acacgcggca ttcaagacga
     4981 cgcgcccaac acactcgacg tatggatgag ccacggcgac aaagtgtcca aactgcccga
     5041 cggtttcgcc gtcatcggcg acactccgtc ctgcccgatt gccatgatgg aaaacaccga
     5101 aaaacaattc tatggcatcc agttccaccc cgaagttacc cacaccaaac aaggccgcgc
     5161 cctgttgaac cgctttgtct tggatatttg cggcgcgcaa ccgggctgga cgatgcccaa
     5221 ctacatcgaa gaagccgttg ccaaaatccg cgaacaagtc ggcagcgacg aagtgatttt
     5281 aggtctgtcc ggcggcgtgg actcttccgt agccgccgcg ctgattcacc gcgccatcgg
     5341 cgaccaactg acctgcgtgt tcgtcgatca cggtttgttg cgcctgaacg aaggcaaaat
     5401 ggtgatggat atgttcgccc gcaacttggg tgtgaaagtg atacacgtcg atgccgaagg
     5461 gcagtttatg gcgaaactcg ccggcgtgac cgaccctgag aaaaaacgca aaatcatcgg
     5521 cgcggaattt atcgaagtat ttgatgccga agagaaaaaa ctcaccaacg ccaaatggct
     5581 ggcgcaaggc acgatttacc ccgacgtaat cgaatccgcc ggtgcgaaaa ccaaaaaagc
     5641 ccacgccatc aaatcccacc acaacgtcgg cggcctgcct gaaaatatga agctcaaact
     5701 gcttgagccc ttgcgcgact tgttcaaaga cgaagtgcgc gagttgggcg tggctttggg
     5761 cctgccgcgc gaaatggtgt accgccaccc cttcccgggc cccggtttgg gtgtgcgcat
     5821 cttgggcgaa gtgaaaaaag aatacgccga cttgctgcgt caggcggacg atattttcat
     5881 ccaagaatta cgcaatacta ccgacgaaaa cggcacgtct tggtatgacc tgaccagcca
     5941 ggcatttgcc gtgttcctgc ccgtcaaatc cgtcggcgtg atgggcgacg gccgcactta
     6001 cgactacgtc gtcgcactgc gcgcagtcat caccagcgac tttatgactg cacactgggc
     6061 agagctgcca tactcactgc tcggccgcgt gtccaaccgc atcatcaacg aagtcaaagg
     6121 catcaaccgc gtggtgtacg atgtcagcgg caaaccgccc gccaccatcg agtgggaata
     6181 aacagcaaac agggctgcac cgtccggcgc agtccttcga ttatcggaaa aaaggaaaaa
     6241 atatgagcac acaagattta agcggcaaaa tcgctttggt aaccggcgca tcgcgcggca
     6301 tcggcgcggc aattgccgac acactggcgg cagccggtgc caaaatcatc ggtacggcaa
     6361 ccggcgagag cggtgcggcg gcgattagca aacgtctggc acaatggggc ggcgaaggcc
     6421 gcgtattaaa ttccgccgaa cccgaaaccg tcgaaaacct gattgccgac atcgaaaaaa
     6481 cgttcggcaa actcgacatt ctggtcaaca acgccggcat cacccgcgac aacctgttga
     6541 tgcgtatgaa agaagaagag tgggacaaca tcatgcaggt caacctcaaa tccgtgttcc
     6601 gcgcttctaa agccgtcttg cgcggtatga tgaaacaacg ttccggccgc atcatcaaca
     6661 tcacctccgt cgtcggcgtg atgggcaatg ccgggcaaac caattatgcc gccgcaaaag
     6721 cgggcttgat cggttttgcc aaatctatgg cgcgcgaagt cggcagccgg ggcattaccg
     6781 tcaactgcgt cgccccgggc tttatcgata ccgatatgac ccgcgccctg cccgaagaaa
     6841 cccgccaaac atttaccgcc caaaccgcct tgggcagatt cggcgacgcg caagacatcg
     6901 ccgatgcggt tctgttcctc gcttccgatc aagcgaaata catcaccggt caaacgctgc
     6961 acgtcaacgg cggtatgctg atgccctaac ggacaggctt ttcaaccatg ccgtctgaag
     7021 ccctttcaga cggcatttgc attcccaaac aaaatgaaca ctcaccacca cctgccctgc
     7081 ccctgcggtt caggcacaag ctatgccggc tgctgccgac cgcttcatct gcgccaaatc
     7141 ctgccgccca ccgccgaagc cctcatacgt tcgcggtacg gcgcgtatgt gctgcacctt
     7201 atcgactaca tcatcgctac taccgttccg gcgcaacaaa cattcctcga tgccgccgaa
     7261 ctgatgcagt ggagccgaat ggctgggctt gaatgtcatc gcacaccgca acctcggcaa
     7321 acagcacgcc caagtcgaat ttgaagccta cttccaagac ggcggaaacc gaacagtgca
     7381 tcacgagctg tcggcattcg tgaaaatagc ggagcaatgg tatttcatcg atccggctgt
     7441 tccgctgcct accatgaaac agccctgcat ttgcggttcg ggcaaaaaat tcaaagcctg
     7501 ctgcggcaaa tatctgcaac ctgtcgcata aaaatgccgt ctgaacgttc agacggcatt
     7561 ttcaacgcgc aaaaaaaaac cattcatacc aagggtaagt atgaatggtc aatacattgc
     7621 gggaaaacat cttacttgct gcactgccga aaagggagaa acggcagcgt taaccagcaa
     7681 aagcattgta cctttattaa tgttaaaaaa cattaattt
//
LOCUS       DAXGCP010000094         7630 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.094, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000094 DAXGCP010000000
VERSION     DAXGCP010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7630
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.094"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..403
                     /locus_tag="ACFJCW_001840"
     CDS             <1..403
                     /locus_tag="ACFJCW_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595-like element IS1016 family transposase"
                     /protein_id="HFC4151912.1"
                     /translation="GAAGKAVVFGIPKRNGRAYTVAADNAEPETLLPAVKKKIMPDGI
                     VYADSPGSRGKSDAGGFTRCRINRSKEFADRRNHINGIGNFWNQAKRALRKYNGIDRK
                     PFPPLLRECEFRLNFGTPSRQLKILRDRCGI"
     gene            complement(1380..2063)
                     /locus_tag="ACFJCW_001841"
     CDS             complement(1380..2063)
                     /locus_tag="ACFJCW_001841"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HFC4151913.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGRLQGLDKKQTAE
                     KYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVVPDGENLKVTLERVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVIEKFYL"
     gene            2212..4515
                     /gene="parC"
                     /locus_tag="ACFJCW_001842"
     CDS             2212..4515
                     /gene="parC"
                     /locus_tag="ACFJCW_001842"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HFC4151914.1"
                     /translation="MNTQPHASHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDNSAYQAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFMPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDRLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRVVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNIFLGDENEKRKLIIKEMQADMKQFGDARRTL
                     VEEAGRAVLTQTAADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSSGRTYSIDAAEIPGGRGDGVPVSSLIELQNGAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLGDMVGRVKAGKVVMTADSGETVLPPVAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESMTHTAVSSEPEILIESEGRRGAAHKDRLPV
                     ALIEAKRGKKGRLLPISGSLKQLSSPK"
     gene            4535..6259
                     /locus_tag="ACFJCW_001843"
     CDS             4535..6259
                     /locus_tag="ACFJCW_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008134 - transcription factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-interacting transcriptional regulator"
                     /protein_id="HFC4151915.1"
                     /translation="MVISNPRELEKLKDRIPNLINIIRVAIVFPLMIMHILGLETGSR
                     ANLHASWTAWAFYLWLAIACWLIFFSTLNPQWQWQWQALRIPSFSAVADITMIGVLTY
                     LFGGIDSGFGILILPFVGSSCLLSYGRYPLLYASYASILLIFNALADSNINMYPLILD
                     AKTVTNTFVVVAGSYFVAMIASLSVRYIDRAGKLAHENHVAYRRIRGLNQIVLNRVQE
                     AVVVINVEHQTILFNKKAKDLLPMLEIGQHTSLFDPVAILWDKTSSRTFEHYIDTPEL
                     TARIRAVPMNKKQNKLLILYIRPQSEIQAEALSVKLAALGQLTANLAHEIRNPMSAIR
                     HADGGTLFLDEVADLPLSMQVKLLRAIQEKAVRRIGDATEQPVDVRIVCATHKNLEAL
                     VESGAFRQDLYYRLNVVSLNMPSLREMRENLKLPTPYLLYKHSHNNRPYTLSPAAQQM
                     LLNYSYPGNFRELENILERAVALCVGYTVQIDDLQIQDVHHKPVRTETAVPVADTLPS
                     ETAAAPSRLLPFDPDTMQIQDYLDKIERDIIGQVLKQTEGNRTQAAKRLGISFRSMRY
                     RMERLNIG"
     gene            6363..7115
                     /locus_tag="ACFJCW_001844"
     CDS             6363..7115
                     /locus_tag="ACFJCW_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HFC4151916.1"
                     /translation="MTDILIDNTATEAVRALIQAFPLVPVSQPPEQGSYLLAEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARITLHFGNSAVQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMTYFHRLVGEAQDEAALLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYGTDKG"
BASE COUNT         1843 a         2242 c         1899 g         1646 t
ORIGIN      
        1 cggcgcggca ggaaaagcgg ttgtcttcgg cattccgaaa cgcaacgggc gggcctatac
       61 cgttgccgcg gacaatgccg agcctgaaac gttgctccct gccgtcaaaa agaaaatcat
      121 gccggacggt attgtttatg ccgatagccc gggcagccgc ggcaagtcgg acgcgggcgg
      181 ttttacccgt tgccgcatca accgttccaa ggaatttgca gaccgtcgga accacattaa
      241 cggcattggg aacttttgga atcaggcaaa acgcgccttg cggaaataca acggaatcga
      301 tcgtaaacct ttcccgccgt tgttgaggga atgcgaattt cgacttaact tcggcacacc
      361 gtcccggcag ctaaaaatcc tgcgggatcg gtgtggaatt tagggataat ctagtacagc
      421 ccctactatt ttagtagttt taccattaga aaaaggatat gaatggaatt gccttggggt
      481 agaagtacta tccgctgctc aatctctagc aaatatctat tgcaacaagg ttcgcctcat
      541 agatggtcat gtttgggagg aataaatgaa aaagcgtagt tggtaatttt tagttgcgca
      601 gggtgggctt cagcccaccg ttttttcttc attttgggtt gttgattggt gggctaaagc
      661 ccaccctacg attactaaaa tcccgtcatt cccgcgtaga gcgcatcata taaggcggga
      721 atccagacct ttcggtgcga aaacttatcg gataaaacgg tttcccctgc atcctggatt
      781 cccactttcg tgggaatgac gggatatagg tttccctacg gacgtgttca gattcctgcc
      841 ttcgcgggaa taacggcgga gcagtttctg cttttccaat aaatgaccgt aacttaaaat
      901 cccgtcatcc ccgcgaaagc aaaaatcctg cctgtcggat ttcggttttt tcgggaaact
      961 gatgaatcgt cattcccgcg caggcgggaa tccagaacgc gggacggcgg caatattcaa
     1021 aggttgtctg aaaattcaga ggttccagat tcccgccttc gcgggaatga cagcggagca
     1081 gtttctgctt ttccgataaa tgaccgcaac ctaaaaccca tccttcacac gaaaacagaa
     1141 aaacaaaaac ctaaaatccc gtcattcccg cgataacagt tgcgtaattg cgtagggtgg
     1201 gcttcagccc accgtttctt catttttgct tgtcaattag tggactgaag cccaccctgc
     1261 ggttactgtt tcttcttttt cgattattaa ttggcaggct gaagccctcc ctacgtttac
     1321 cgtcaaaaat gccgtctgaa atgctcaagc cctcagacgg cattttttat ttcgcaccct
     1381 tacaggtaaa atttctcgat gactttcagg ttgtcgtcta atttgtacac cagcggctgg
     1441 ccggtcggga tttccaagcc catgatgtct tcgtcggaaa tgccctcgat gtgttttgcc
     1501 agcgcgcgca gggagttgcc gtgcgccgct accaagacgc gtttgccgct caaaatcgcg
     1561 ggggcgattt ggtcttccca aaacggtaat acgcgctcca gcgttacttt caggttttcg
     1621 ccgtcgggta cgacatcggc aggcagatgg gcatagcgac ggtctttgtg tgcggaaaac
     1681 gcgtcgtctt tgtccaaaag cggcggcagg gtgtcgtagc tgcgccgcca gatgcggact
     1741 tgctcgtcgc cgtatttttc ggcggtttgt tttttgtcca aaccttgcag tcggccgtag
     1801 tggcgttcgt tcagcctcca tgttttgatt tgcggtacga acagttggtc ggattcttcc
     1861 aaaacgatgt tgcaggtctt aatcgcgcgg gtcaggacgg atgtgaaggc gatgtcgaac
     1921 tcatagccgt tttctttcag ttttttaccg gcggcggcgg cctcggcaag cccctgctcg
     1981 ctcagcttca cgtcgcgcca gcctgtaaac aggtttttcg cgttccattc gctttgtccg
     2041 tggcggataa ataccaattc catatcgtct ccaatgtgtg aaagtgggaa agctttattt
     2101 ataacatatt ttcacatttc ccgtatttga ttcagattca ggcacggcgc ccactatggt
     2161 ttgccatttt gatttacaat aatgtccttt gctttacatt ccgcatacac aatgaatacg
     2221 caaccgcacg cttcccatac cgattccaac acgctgatgc tcggccgata cgccgaacgc
     2281 gcctatctcg aatacgccat gagcgtggtc aaaggccgcg cgctgcctga agtttcagac
     2341 ggccaaaagc ccgtgcagcg gcgcattttg tttgccatgc gcgatatggg tttgacggcg
     2401 ggggcgaagc cggtgaaatc ggcgcgcgtg gtcggcgaga ttttgggtaa ataccatccg
     2461 cacggcgaca attccgccta tcaggcgatg gtgcgcatgg ctcaggattt taccttgcgc
     2521 tatcccttaa tcgacggcat cggcaacttc ggttcgcgcg acggcgacgg ggcggcggcg
     2581 atgcgttaca ccgaagcgcg gctgacgccg attgcggaat tgctattgtc cgaaatcaat
     2641 caggggacgg tggattttat gccgaactac gacggcgcgt ttgacgagcc gctgcacctt
     2701 cccgcccgct tgcctatggt gttgctcaac ggcgcgtcgg gcatcgcggt gggtatggcg
     2761 accgagattc cgtcgcacaa tttgaacgaa gtcacgcagg cggcgattgc actgttgaag
     2821 aaaccgacgc tggaaaccgc cgacctgatg caatatattc ctgctcccga ttttgccggc
     2881 ggcggtcaaa tcatcacgcc ggcggacgaa ttgcgccgta tttacgaaac cggcaagggc
     2941 agcgtgcgcg tgcgtgcgcg ttatgaaatc gagaaattgg cgcgcggaca gtggcgcgtc
     3001 atcgtaaccg aactgccgcc gaacgccaat tccgccaaaa tccttgccga aatcgaagag
     3061 caaaccaacc cgaaaccgaa agcgggcaag aagcagctca accaagaccg gcttaatacc
     3121 aaaaagctga tgctggattt aatcgaccgc gtgcgcgacg agtccgacgg cgaacatccc
     3181 gtgcgccttg tatttgaacc gaaatccagc cgcatcgata ccgatacctt catcaacacg
     3241 ctgatggcgc aaacttcgct ggaaggcaat gtgtccatga acttggtgat gatgggtttg
     3301 gacaaccgcc ccgcgcagaa aaacctgaaa acgattttgc aggaatggct ggatttccgc
     3361 gtcgttaccg taacacgccg tctgaaattc cgtttaaacc aagtggaaaa acggctgcac
     3421 atcctcgaag gccgtctgaa agtctttctg cacatcgacg aagtgattaa agtcatccgc
     3481 gaatcggacg acccgaaagc cgatttgatg gcggcattcg ggctgaccga aatccaggcc
     3541 gaagacattt tggaaatccg cctgcgtcag ctggcgcgtt tggaaggttt caaactcgaa
     3601 aaagaattga acgaattgcg cgaagaacaa ggccgtctga atatcttttt gggcgacgaa
     3661 aacgaaaaac gcaagctgat tatcaaagag atgcaggcgg acatgaagca gttcggcgac
     3721 gcgcgccgca cgctggtgga agaggccgga cgcgccgtgc tgacacaaac cgccgccgac
     3781 gaacccatca cgctgatttt gtcggaaaaa ggctggatac gcagccgtgc cggacataat
     3841 ctcgatttga gccaaaccgc gttcaaagaa ggcgaccgcc tcaaacaaac ccttgaaggc
     3901 cgcactgttt tacccgtcgt catcctcgat tcatcgggca gaacctactc gatcgatgcc
     3961 gccgaaatcc ccggcggacg cggcgacggc gtaccggttt cctccttaat cgagttgcaa
     4021 aacggcgcga aacccgtcgc gatgttgaca ggattgccgg aacaacatta tttattatca
     4081 agcagcggcg gctacggctt tatcgccaag ctgggcgata tggtcggacg cgtgaaagcg
     4141 ggcaaagtgg tgatgaccgc agacagcggc gaaaccgtcc tgccgccggt tgccgtctat
     4201 gcctcctcgt tcatcaaccc cgactgcaaa atcattgcag ccaccagtca aaaccgcgcc
     4261 ctcgccttcc ccatcggcga attgaaaatt atggcgaaag gcaaaggact gcaaatcatc
     4321 ggattaaacg ccggcgaatc gatgacgcat accgccgttt cttccgagcc ggaaatcctg
     4381 attgaaagcg aaggcaggcg cggcgcggcg cacaaagacc gcctccccgt cgccctgatt
     4441 gaggcaaaac gcggcaaaaa aggcagactg ttgcccatat cgggcagcct gaaacagctt
     4501 tcttccccca aataaacccg gttccgcaca tattatggtg atttccaacc cccgcgaact
     4561 tgaaaaactc aaagaccgga ttcccaatct gatcaacatc atccgcgtcg ccatcgtttt
     4621 cccgctgatg attatgcaca tcctcgggct ggaaaccggc agccgtgcga acctgcacgc
     4681 ctcatggacg gcgtgggcgt tttacttgtg gcttgccatt gcctgctggc tgattttctt
     4741 ttccaccctc aacccgcaat ggcaatggca atggcaggct ttgagaatac cgagtttcag
     4801 cgccgtggcc gacatcacga tgatcggcgt gctgacctac ctgttcggcg gcatcgattc
     4861 ggggttcggc atcctgatcc tgcccttcgt gggcagctcc tgcctactca gttacgggcg
     4921 ttatcccctg ctctatgcca gctatgcatc catcctgctg atattcaacg cccttgcaga
     4981 cagcaatatc aatatgtatc cgctgattct ggatgcaaaa accgtcacca ataccttcgt
     5041 cgtcgtagcc ggctcctatt tcgtcgctat gattgcctcg ctgtcggtca gatacatcga
     5101 ccgtgccggc aaacttgccc atgaaaacca cgtcgcctac cgccgtatca ggggcttgaa
     5161 ccaaatcgtg ctcaaccgcg ttcaggaagc ggtcgtcgtc atcaacgtcg agcatcagac
     5221 catactgttc aataaaaagg caaaagatct gctccccatg cttgaaatcg gacagcatac
     5281 ctccctgttc gaccctgtcg ccatcttatg ggataaaaca tcctcacgca ccttcgaaca
     5341 ctatatcgac acgcccgaac tgaccgcccg catccgcgcc gtgccgatga acaaaaagca
     5401 gaacaagctg ctcatcctct atatccgccc gcaaagcgaa attcaggcgg aagccctgtc
     5461 cgtcaaactt gccgcgctcg gacaactgac cgccaacctt gcccacgaaa tccgcaaccc
     5521 gatgtccgcc atccgccacg ccgacggcgg cactttattt ttggacgaag tggccgacct
     5581 gcccctttcc atgcaggtca aactcttgcg cgcgattcaa gaaaaagccg tgcgccgtat
     5641 cggcgacgcg accgagcagc ccgtcgatgt ccgcatcgtc tgcgccaccc acaaaaacct
     5701 cgaagccctt gtcgaaagcg gcgcattccg ccaagacctg tattaccgtc tcaatgtcgt
     5761 cagcctcaat atgccgtccc tgcgtgaaat gcgcgaaaat ttgaagctgc ccacccccta
     5821 cctcctgtac aaacacagcc acaacaaccg gccctacaca ctctcccccg ccgcgcaaca
     5881 gatgctcctg aattacagtt atccgggcaa tttccgcgaa ctcgaaaaca tcctcgaacg
     5941 cgccgtcgcc ctgtgcgtcg gatatacagt gcaaatcgac gacctgcaaa tccaagatgt
     6001 gcaccacaaa cccgtccgga cggaaaccgc cgtccccgtt gccgatacct tgccgtctga
     6061 aacagccgcc gcaccgtccc gccttctccc gttcgacccc gataccatgc agatacagga
     6121 ctatctcgac aaaatcgaac gcgacatcat cggacaagtc ctcaaacaaa ccgaaggcaa
     6181 ccgcacgcaa gccgccaaac gcttgggcat cagcttccgc tctatgcgct accgtatgga
     6241 acgcctcaac atcggctgac gacaaaacgg catccgcacc atctccgccc acccgaaaaa
     6301 atgccgtctg aaacggcacg ggaaagcggg ttcgccccac gcccgaacgg acacaaaaca
     6361 ccatgaccga catccttatt gacaacaccg ccaccgaagc cgtccgcgcc ctgatacagg
     6421 cattccccct tgtgcccgtt tcccaaccgc ccgaacaagg cagttacctc cttgccgaac
     6481 acgataccgt cagcctcagg cttgtcgggg aaaaaagcag cgtcatcgtc gattttgcct
     6541 ccggcgcggc acaataccgg cgcacaaaag gcgggggcga actcatcgcc aaagccgtca
     6601 accataccgc caaaccgacc gtttgggacg cgaccgcagg attggggcgc gacagcttcg
     6661 tcctcgcctc gctcgggctg accgttaccg ccttcgagca acatcccgcc gtcgcctgcc
     6721 tgctttcaga cggcatccgc cgcgccctcc tcaatcccga aacgcaagac accgccgcgc
     6781 gcatcaccct gcatttcggc aactccgcag tacaaatgcc cgcccttgtt caaacacaag
     6841 gcaaacccga catcgtctat ctcgacccca tgtatcccga acgccgcaaa agtgccgccg
     6901 ttaaaaaaga aatgacctac ttccaccggc tcgtcggcga agcgcaagat gaagcggcac
     6961 tcctgcatac cgcacgccaa acagcaaaaa aacgcgtcgt cgtcaaacgc ccccgcctcg
     7021 gcgaacacct tgccggacaa gcccctgcct accaatacac cggcaaaagc acccgcttcg
     7081 acgtttacct gccctacggg acggacaagg gataacgccc ataaaacaag acaccgaaaa
     7141 atttgccgtt cttatgcaaa cgagaaaccg gtttttgcgt ttcgactgtt ttggataaat
     7201 catcacacct taaagtttgt cattcccacg gaagtgggaa tccagaaatg aaaagcaaca
     7261 ggaatttatc gtaaatgacc gaaaccgaac ggactagatt cccgcctgcg cgagaatgac
     7321 aaggtttcag gttgctgttt cgggttgctg ttttttatgg aaatgacgag gttttagatt
     7381 gcgagaattt atccgctccg ccgtcattcc cacggaagtg ggaatctaga aatgaaaggc
     7441 aacaggaatt tatcgtaaat gaccgaaacc gaacggacta gattcccgcc tgcgcgggaa
     7501 tgacggggcg ggaggatgcc gtctgaaatt ccgtcattcc cgtgaaaacg ggaatctaga
     7561 acttctgatt tttcagacga cttttgaaga ttgccgctac ccaatgatct ggattcccgc
     7621 ttttgcggga
//
LOCUS       DAXGCP010000095         7592 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.095, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000095 DAXGCP010000000
VERSION     DAXGCP010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7592
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.095"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(95..301)
                     /gene="rpoZ"
                     /locus_tag="ACFJCW_001845"
     CDS             complement(95..301)
                     /gene="rpoZ"
                     /locus_tag="ACFJCW_001845"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HFC4151917.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDVRNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(359..976)
                     /gene="gmk"
                     /locus_tag="ACFJCW_001846"
     CDS             complement(359..976)
                     /gene="gmk"
                     /locus_tag="ACFJCW_001846"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HFC4151918.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEANGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSTEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLKGRGTDSREVIQRRLSKVRHEIEQ
                     SVLFDFVVVNDDLEKAEGDLLHIVNACRLKRSRQLGFIADLLENS"
     gene            1104..1703
                     /locus_tag="ACFJCW_001847"
     CDS             1104..1703
                     /locus_tag="ACFJCW_001847"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HFC4151919.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYQLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(1749..2537)
                     /locus_tag="ACFJCW_001848"
     CDS             complement(1749..2537)
                     /locus_tag="ACFJCW_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HFC4151920.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDTGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPL
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAAKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            2862..4217
                     /gene="yegQ"
                     /locus_tag="ACFJCW_001849"
     CDS             2862..4217
                     /gene="yegQ"
                     /locus_tag="ACFJCW_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HFC4151921.1"
                     /translation="MKAPELLLPAGGLERMRAAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVADMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELGMEEIAEIRQECPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESEAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIHDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHQTQDYQNYLSGHSTAKQSQYVGHVTEIDENGWATIEVKNR
                     FAVGDSLEIIHPSGNQTIKLEQMTRKGQPVDVAPGNGIQVKIPNMQGKEKALIARVLN
                     P"
     gene            4348..4821
                     /locus_tag="ACFJCW_001850"
     CDS             4348..4821
                     /locus_tag="ACFJCW_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HFC4151922.1"
                     /translation="MLAACQSGRALKNAHTASAGTPAGESCKVIRGDTAGGGKNIIYR
                     CSNGQAAINAATAAGVLESGIPVSFGGGVPVANGRNLVTRQAANGVGKSDSEACEHAL
                     INAARKFQQTAGKLGGRSVTGFHSYFGKQSLQGGQYDCQAGSFHVRAVMRANVVR"
     gene            complement(5030..7403)
                     /locus_tag="ACFJCW_001851"
                     /pseudo
     CDS             complement(5030..7403)
                     /locus_tag="ACFJCW_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent
                     hemoglobin/transferrin/lactoferrin family receptor"
BASE COUNT         1878 a         2151 c         1784 g         1779 t
ORIGIN      
        1 atttcagacg gctttcggga tgtatgtgtt ttttcatttc aaaccgtcgg actgcacggc
       61 ggcagagtgt gccggcgtgc gtttccggca gaatttattt attgcgcgtc aacagttccg
      121 taccgatatg cccggctgcg atttccctta aggcggtaac ggtcggtttg ttattgcgga
      181 catcgtccac aagcggcgta ttgccatttt caagctggcg ggcccgacgg gccgctacca
      241 atgtcaggtc aaaatggttg gaaatttttc cggtacagtc ttcggtggta atacgtgcca
      301 tattatttgc tttctttcaa aaatatttaa attgggaaac cggatatttt cgcggttttt
      361 aggaattttc caacaaatct gcaataaatc ccagttgccg cgaccttttc agacggcagg
      421 cattcacaat atgaagcaaa tccccctccg ccttctccag gtcgtcattg accacgacaa
      481 agtcgaacaa tacggactgt tcgatttcat gccttacctt cgacagcctc ctttggataa
      541 cttcccgact gtccgtcccg cgccctttga ggcgcgcggc aagcacgtcg aaagaaggcg
      601 gcaggataaa gataccgaca gcttccggca gcgcgttgcg aacctgcgcc gcgccctgaa
      661 cgtcgatttc caaaatcacg tcatagcctg ccgccgccaa cgcattcacg ccctccgtgc
      721 ttgtgccgta atagttgccg aatacgtctg cgtattccaa aaaagcctcc tgcgcgataa
      781 gcgattcaaa ctcttctttg gaaacaaagt gataatgtac gccgtttgct tcgccttcac
      841 gcggcgggcg cgtcgtatgc gacacggaaa cgcgcaaacc gttatggttt gccaacagcc
      901 gcgacaccag cgtggttttg cccgtgccgg aagcggccga aatgataaag atgttgcctt
      961 ttcgataagc ggacatattt tttacctgta tattttccaa ccgattgtat cacaacggac
     1021 accctatttc atatttgccg atgcccatat tttgccgcta ttgttttgat tgatttggca
     1081 agcggcaggc tgacggctac aatatggcgt taaaaacatc aaacttggaa cacgcaatgc
     1141 tggttcatcc cgaagctatg agtgtcggcg cgcttgccga caaaatccgc aaaatcgaaa
     1201 actggccgca aaaaggcatc ttattccacg acatcacgcc cgtcctgcaa agtgcggaat
     1261 acttccgcct tttggtcgat ttgctggttt accgctatat ggatcagaaa atcgacatcg
     1321 ttgccggctt ggacgcgcgc ggcttcatta tcggcgcggc actcgcctac cagctcaacg
     1381 tcggcttcgt ccccatccgc aaaaaaggca agctgccttt tgaaaccgta tcgcaaagct
     1441 acgcgctcga atacggggaa gctgcggtgg aaatccacac cgatgccgtc aaacccggtt
     1501 cgcgcgtcct gctggtcgat gatttggttg ccacgggcgg cacaatgctt gccgggctgg
     1561 aactgatccg caaactcggc ggggaaattg tcgaagccgc cgccattttg gaatttaccg
     1621 accttcaagg cggcaagaat atccgcgcaa gtggcgcgcc cttatttacc ctgcttcaaa
     1681 acgaaggctg catgaaaggc tgaaaaccga ccctgccgtc tgaaaccggc agggttgtta
     1741 ttatacgttc aaatcacacc caaatcttgc aagcccctca acacgccgtc ttcatcaacg
     1801 ccggggcaaa catatttcgc cgcttctttc gctgcctgtt ccccgttacc cattgccacg
     1861 ccgaacccga cttcagacag catttccaca tcgttcaaac cgtcgccgaa cgccatcacg
     1921 tctgccattt ccaaacccaa tgcttcaacc acgcttctga tgccgtctgt tttcgacatt
     1981 cccgcaggca gcagatcgac cgcttcctcg tgccagcgca ccgttttcaa gccttcccgt
     2041 tccacaatat ccgaccaaag cggcatttcg ttttcctccg caaacaccag catctgatac
     2101 accggtttgc ttgaaaaata atccttatcg gcaaaaaaat cgctggcgat atgctgcaag
     2161 gcgcggcaca cgcattccga cagcgcggac acggcgatcc cctctccgcc gacaaacgca
     2221 taatccatgc ccaagccatc caaatgcgca caaaccctgc ccatcaaacc ggtatccatc
     2281 ggtacttcgc gcacagtttt accgtgcagc agcgcaaact gtccgtttat cgttaccacg
     2341 gcatccatac ccgtttccgc catcatgtcc ctgacctttt cgggaatcgt cgccaaagac
     2401 cgccccgttg ccaacgccgt caatatacct ttgccgcgca aagccgccac cgccgttttc
     2461 acggaagggc gcaaggtatc cgtatatttg cggtacagcg tatcgtcaat gtcgaaaaac
     2521 acgattttgg gattcatcat attctctctc gcactcaaac tgccgcattg tatcccaaga
     2581 aggcaaatac ttgataaatc cttataaatt tcccggcaaa attgaccgcg aacacgaaaa
     2641 ggcggataat ccgcccatct tcaaacaccc ttcagacggc atttgcagca atgccgtctg
     2701 aaacattttt acaaagcata caaatcatgc ttcaacacac aggacgacac ataaagcacc
     2761 gccctatatg tcgtcctgat tcggaagggg ttacgcccct cccaaataaa gtctgatcct
     2821 gccgccctaa agggcggggt ttcaaccgaa aaggaaacac gatgaaagca cccgaactct
     2881 tattgcccgc cggcggattg gaaagaatgc gcgccgccta cgattacggc gcagatgccg
     2941 tttacgccgg cagcccgcgt tactccctgc gcgcccgcaa caacgaattt gccaaactcg
     3001 acgtcctcga gcaaggcatt aaagaagcgc acgaacgcaa caaaaaattc tttttgaccg
     3061 tcaacaccct gccgcacaat tccaaactca aaaccttcgt tgccgacatg gagccgctga
     3121 ttgccatgaa acccgacgcg ctgattatgg cggatccggg tttgattatg accgtgcgcg
     3181 aaaaatggcc ggaaatgccg atccatctgt ccgtacaggc gaacaccacc aactactggg
     3241 gcgtgaaatt ttggcagaac attggtgtcg aacgcatcat cctgtcacgc gaattgggca
     3301 tggaagaaat tgccgaaatc cgccaagaat gccccgacat cgaactcgaa gtcttcatcc
     3361 acggcgcatt gtgcatcgcc tactcaggcc gctgcctgtt gtcgggctat ttcaaccacc
     3421 gcgatcccaa ccaaggcacc tgcaccaact cctgccgttg ggactacaaa gtccacaacg
     3481 ccacggaaag cgaggcaggc gatgcccagc ttctgcaagg tttcaacttt gaaaaagccc
     3541 aagaagaagc caaccaaaac tttgaaggca tcaacggtca aaaacgccat ccctacgccg
     3601 acaaagtttt cctgattgaa gaatccaacc gcccgggcga gatgatgccg attatggaag
     3661 acgaacacgg cacctacatc atgaactcca aagatcttcg cggtatcgaa gtcgtcgaaa
     3721 aactcgccaa aatcggtgtg gacagcctca aagtcgaagg ccgtaccaag tctctctact
     3781 acgtcgcccg cgtcgcccag tcctaccgca aagcgattca cgatgccgtc gcaggccgtc
     3841 cgtttgatta cagcctgttg agcgaactcg aaggccttgc caaccgaggc tacaccagcg
     3901 gcttcctcga acgccaccaa actcaggatt atcaaaacta cctcagcggc cattccaccg
     3961 ccaaacaaag ccaatacgtc ggacacgtta ccgaaatcga cgaaaatggc tgggcgacca
     4021 tcgaagttaa aaaccgcttc gccgtcggcg attcgctcga aatcatccac ccgagcggca
     4081 accaaaccat caaattggaa caaatgaccc gcaaaggcca acctgtcgat gttgccccgg
     4141 gcaacggcat tcaggtcaaa atccccaata tgcagggcaa agaaaaagcc ctcatcgcac
     4201 gcgtgttgaa cccctgagcc acaatgccgt ccgaaccccg ttttcagacg gcattttgtt
     4261 gaatcttact gtacaatggc aatgatttcc cacagcaaac aaggacatcc gacataaaaa
     4321 atcctcatac tctccgccgc cgccctgatg ctggcagcct gccaatccgg ccgcgcgctt
     4381 aaaaacgcgc acacggcatc cgccgggaca ccggccggag aatcatgcaa agttatccgc
     4441 ggagacaccg caggaggcgg caaaaacatc atttaccgtt gtagcaacgg tcaggcggca
     4501 ataaatgcag ccaccgccgc cggcgtattg gaatcaggga ttcccgtcag cttcggcggc
     4561 ggcgtaccgg ttgcaaacgg caggaatcta gttacacggc aagcggcaaa cggcgttggc
     4621 aaatccgact ccgaggcctg cgaacacgcc ctaatcaatg ccgcccgcaa attccagcag
     4681 accgccggca aactcggcgg gcgcagtgtt accggcttcc acagctactt tggcaagcaa
     4741 tcgctgcaag gcggacaata cgactgtcag gcaggttcgt tccacgtccg cgcggtcatg
     4801 cgcgccaatg tcgtccgtta acatatcggc aatcaaaaaa tgccgtctga aacatttttc
     4861 agacggcatt tttaatcctg caacattact ccctgccctg agttcggata ctgtatcaat
     4921 ataaaacccc atcacacaga tttacggtaa aaagccgtcc gaatgagttc ctgaaaacaa
     4981 ttcggacagc tttaatcccc aacgaggcaa ttaatccaat aatactagat taaaacttcc
     5041 attccagcga tacggcgtaa ttacggcctg aggcgcggta gcggtctaag cctttgccat
     5101 ctcggtcgac cgcgttggtg gtgctgtagc tatacaaacc gcgcagggaa tcccaagtgg
     5161 tgtatttgcg gttgaacaca ttatatacgc ctgcacgcaa agtcaggttt ttagccggtt
     5221 tgtagaagcc gtacatatca aacacataag ccgacttgtt cagccacggg taatctttta
     5281 cctttttctg caaaggcgta ccccggccct tgttttcata aacggtgtat tgcgcgtctt
     5341 tggccttttt cgcacccaga taagtcaggc gggagaacac accccatttt tcgctcgggc
     5401 ttcgtagtcg acaccggcaa tcactttcgg cggctgtgtg gacagcaggc tgttgtcgcc
     5461 cgacagtttg cttttcgcat aacccagcga gccgaacaat ttccagccct caggaacaaa
     5521 agacgctatt ttgtccacat tcagacggcc tgtcagctca agaccacgga ttcgggcctt
     5581 atcgatattt tgcatctgcc attccggttt ttcggaataa ggattgctac acataccgta
     5641 gtagtaattc atctgagtac agccgacatc gccgctggtg gtcagcttct gctcttcaga
     5701 caagaagttg cggtaattgt tttgatacag gttggcatcc aaagtacctt tttcgctgcg
     5761 gccttgcaga gacagggtgt gggtggtgct gcgctcggct ttcaggttgg gattgggcag
     5821 ccaattaccc gaaccgtggt tgtaagtgaa atacacttcg gacgcattgg ggacacggta
     5881 gccggaagta atgtcgtaac cgacatgcca agcctgattc agttgcgccg ccaaaccgac
     5941 aaatccgctc cagcctttat aagtattggc tgcaggcggt gttttgtcac aagcatgaca
     6001 ctcggcattc aattcctgag gcgtcatttt ggtatgatcg taacggatat ctgcacggct
     6061 gctgaacacg tcgttccatt ggatttgatc agacagtgag aaaccataat tagtggtttt
     6121 cacagggtgt tgaatcgagc tggtagtacg ggatatctgt ccgctgaagt aataatcgtc
     6181 gcggtttaag ttttcaaact cacgccgact ggcgaaagtt ttaaacgaca agcgatgttg
     6241 gccgcccagt tgcaacggtt ggctgtccat acgcaaagta aaacgtttga atcgggtgtc
     6301 catgctgcgg ttgtatattt cgtccaaatc cttctgattt atagttgcgc gtccaggtgg
     6361 aataatccat cgggaacgag cctttgttgt taaccgccgc cactttggtt ttctgataat
     6421 cgaagtccgc cttcaaagac gacaaccaat ttgaatcagg cgtccattcg taaaagaggt
     6481 tggcattgcg ccgtctgttt acgtcatcgg cttcgcgcca ggaagaagcg gtcaggttat
     6541 aagactcttc aaatcgtgta attatgcccc tgctggccgt taaacgatgc gccgatgcgg
     6601 tgcttgtcgt tgatttgata agcaatctta cccaagaagt tgtggtattt gtgtttggac
     6661 ggatcaggga taccgcgtgc cgaaccacgg atattcgctc cgctgccagc accctctacc
     6721 ggatagccac gctcgcccgc gctttcggtc tcatgaccgc gacgttgcga atacagcaaa
     6781 gcggcatcca cgcggtcgtt gctcacaccg aaaccgagtg tatttgtcca ttcgcggttg
     6841 cggctgctgt aaccgttttt catcatcacg ccgaattgcc tgtcgtccaa cagcaaatca
     6901 tgtccttgca gggtttggta attcacgccg ccacccaatg cgccgctacc ggtattgaaa
     6961 gagtcagcgc ccttcgcgat ttcgatgttg cgcacgagtt cggggtcgat agacaggcgc
     7021 gagctgttga agttgccata acgtgcatac agtgagtttt cttccgaatc aggcaggctc
     7081 acgccgtcaa tgctgacacc gacacggttg ccttccacgc cgcgcacagc aaagcctttt
     7141 tgatggcggc cgctatcgct caagccgacg tcggtggagt aacgcaccaa gtctttgttg
     7201 tcgcgtatca tttcctgttg aatgcggccg aggttgacac gttccacggt tgcaggcgca
     7261 ttaagctggt ctttaacgcg cacttctttt atctctgctt taacgggtgt ggtttcggtt
     7321 gcagcttcat ccgctgccaa gaccggattg ccgaaaatac tgccgaccag cgcggcaata
     7381 ggaagcatgt gtaatggttt catattatca actcaagatg taatggattg ttcatccatc
     7441 agttaattca taataaattt tctgataatc attaatattt aataagacag caacccgtac
     7501 aaataaatct gtgtcgtgta attaaaggtc tctgcaaaca tctatgccga ggccttgttt
     7561 gtttcattat ttttaagggt ctgtactaga tt
//
LOCUS       DAXGCP010000096         7526 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.096, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000096 DAXGCP010000000
VERSION     DAXGCP010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7526
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.096"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..345
                     /locus_tag="ACFJCW_001852"
     CDS             <1..345
                     /locus_tag="ACFJCW_001852"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151923.1"
                     /translation="PDAWQAAGEDHGRGPYVQADLAYAYEHITRDYPEATGANQGKIS
                     TVSDYFKNIRTRSVHPRLALGYDFGGWRVFSAPAVAAGLHQSLQYYRSRHCRRFRQIH
                     QFRRITPIPQKP"
     gene            complement(1655..1891)
                     /locus_tag="ACFJCW_001853"
     CDS             complement(1655..1891)
                     /locus_tag="ACFJCW_001853"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151924.1"
                     /translation="MKTANPHIVIPAKTALHTPPAAAIFTLKSRHSRESGNLGMKSSR
                     NLSEITETERTGFPPAREWRGKVGCGWDWWNDEI"
     gene            complement(1895..2050)
                     /locus_tag="ACFJCW_001854"
     CDS             complement(1895..2050)
                     /locus_tag="ACFJCW_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151925.1"
                     /translation="MPSESPSDGIGFPKHSAPFSSCRKQTPIRFAANAQKTQCRLKRQ
                     TGFRRHR"
     gene            complement(2067..3863)
                     /locus_tag="ACFJCW_001855"
     CDS             complement(2067..3863)
                     /locus_tag="ACFJCW_001855"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HFC4151926.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTANEAGVWVDSRYWEQAAKQLSGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGIPSDMVSLTGKRTLAQSLAAKNIRIQHPDDLLDQVWTSRPAIPAETVFIH
                     DHAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDSAVLFTEQCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESARLIEGINPSTFFKSVKSEADIARIREAMEQDGAALCGFFAEFEDIIGKGG
                     SLTEIDVDTMLYRHRSARPGFVSLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPTAEQKRDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVADPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            4322..5575
                     /locus_tag="ACFJCW_001856"
     CDS             4322..5575
                     /locus_tag="ACFJCW_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HFC4151927.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QLALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSCVYLWVFLILCIASATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRIRPSGYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGREKPGNAELFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDKRHRLTAGMNA
                     LAIVGLLYLAGFAVLFLLNLTGLLA"
     gene            5730..7241
                     /gene="lysS"
                     /locus_tag="ACFJCW_001857"
     CDS             5730..7241
                     /gene="lysS"
                     /locus_tag="ACFJCW_001857"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HFC4151928.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLNNIRQQRNAYPNDFKRDS
                     FAADLQAQYGEIGKEELDPQAVPVKIAGRMMLKRQMGKASFATIQDVTGQIQLYLNNK
                     GVSQEVLDGFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEKSRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIVDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDLQTIRDVILFPQMRPE"
BASE COUNT         1624 a         2045 c         2153 g         1704 t
ORIGIN      
        1 cctgatgctt ggcaggcggc gggtgaagac catgggcgcg gcccgtatgt gcaggcggat
       61 ctggcttacg cctacgagca catcacccgc gattatcccg aagcaaccgg tgcaaaccaa
      121 ggcaaaataa gcacggtaag cgattatttc aaaaacatcc gcacccgctc cgtccacccc
      181 cgactcgccc tcggctacga tttcggcggc tggcgcgtct tttccgcccc cgccgttgcc
      241 gccggcctcc accaatccct tcaatattac cgatcccgcc attgccgccg attccgtcaa
      301 atccatcaat tccgccgaat cacgcctatt ccccaaaaac cttgatgcgg cgggctgaag
      361 cccgccctgc aaccctctct atgcaccccc ttgcgagccc gacactacgc aacatcttga
      421 gaacccatcc tgtcaagaat acccgaaccg tcccgataca ccgtaatcct aaaacccgcc
      481 attcccgcgc aggcgggaat ccagtccgtt cggtttcagt catttccaaa aattgccgta
      541 gcgttaagtt tctagattcc cactttcggg ggaatgacgc ggtgcaggtt tccgtgcgga
      601 cggattcgtc attcccacac agacaggaat ccggatttgt ccgcgcggaa acttatgcgc
      661 cgtcattccc gcacaggcgg gaattcaggt ctgtcggcat aggaacttat cggataaaac
      721 ggttgcccca accctgcgtt ctagattccc actttcgtgg gaatgacgat tcaggtattc
      781 ctaatagcaa cccgccacaa cccacctacg cccatcctac gcatctgcca tacagccctg
      841 ttccggagcg cgcggataag gtgcgatgcc gccggcgggc atcatagtcc tctctccctg
      901 tgggagagag ctagaaagct gcaaggcttg tattttagaa gactaaggga tttgggaaag
      961 attgtcgaaa ttcggggagc cctctccccc acgggggagg gggcaggttg cggcagattt
     1021 ggcggttgca ggcggtttga aaaacagatt ggatttacaa ccgttgattt caggtcgtct
     1081 gaaaagcaaa aagcagcctg cacaacctga ttagtttaca aaacccttaa ccccaacagc
     1141 ctccccgtcc tctctccccg tgggagaggg ctggagagag ggcaacaagc cgcaaggctt
     1201 gtatttaggc ggttgagttg ttgggaaagg ttgccgcaac ttggagaatg ccgcctcccc
     1261 ggccctcccc cacgggggag ggagtgggtt tcggcagatt tttcggttgc aggcggtttg
     1321 aaaaacagat tggatttaca accgttgatg caggtcgtct gaaaagcaaa aagcagcctg
     1381 cacaacctga ttagtttaca aaacccttaa ccccaacagc ctccccgtcc tctctccccg
     1441 tgggagaggg ctggagagag ggcaacaagc cgcaaggctt gtattggggc ggttaagttg
     1501 ttgggaaagg ttgccgcaac ttggagaatg ccgcctcccc ggccctcccc acgggggagg
     1561 gagcagattg cggcagattt ggcggttgca ggcggtttga tttgcgaggg aatcggacgc
     1621 gcaggcggga atccggattt gtccgcgcgg aaacttatat ttcgtcattc caccaatccc
     1681 acccacagcc cacttttccg cgccattccc gcgcaggcgg gaatccagtc cgttcggttt
     1741 cggttatttc cgataaattc ctgctgcttt tcattcctag attcccactt tcgcgggaat
     1801 gacgggattt cagggtaaag atggcggcag ccggaggggt gtgaagagct gttttcgcag
     1861 gaatgacgat atgcggattt gctgttttca tccgctaccg atgccgtctg aagcctgttt
     1921 ggcgtttcag acggcattgg gttttttgtg catttgccgc aaaacggatc ggtgtctgct
     1981 tgcggcaaga tgaaaacggc gcggaatgtt ttgggaaacc aatgccgtct gaagggcttt
     2041 cagacggcat ttttgtaccg tgccgtttaa cgcgccagcg gttcggtgcg tttaatcagc
     2101 cacgcttttg ccgcgccttc ggtcagcggc tcgaggcggc ggcggacttc ggcgtggtag
     2161 cggttgaccc agtcgatttc gccgtcggtc atcagggcgg tgtccatcag gcgtgtatcg
     2221 atggggcaga gggtcagggt ttcaaaacag aggaagctgc cgaactcggt ttcctgcggg
     2281 tcggcgacgg cttggttggc ggcgaggttt tcaatgcgga tgccccattt ccccggacgg
     2341 tagaggccgg gttcgatgga ggtaaccatg ccttttttca tggcggtttc gggcgtggcg
     2401 ggggcggcga aggcgatgcg ctgcgggcct tcgtggacgt tgaggaaata gcctacgccg
     2461 tggccggtgc cgtgtccgta gtcgcattgc gcctgccaca ggggtttgcg gcaaatcgcg
     2521 tcaatcagcg gcgaggggat gttttcgggg aacacggctt cggcaagcgc gatatgggct
     2581 ttgagaacga gcgtgttgtc gcgtttttgt tctgctgtgg gcgtgccgac ggggacgacg
     2641 cgggtgatgt cggtcgtgcc gcctttgtat tgcgcgccgg agtcgatgag cagcagaccg
     2701 ttgccgctga tggtgctgtg gctttcgggt gttgcgctgt aatgcggcag ggcgccgttg
     2761 gcgttgaagc ctgcgatggt gtcgaaactc aaggacacaa aacccgggcg cgcgctgcgg
     2821 tggcggtaaa gcatcgtatc cacgtcgatt tcggtcaggc tgccgccttt gccgatgatg
     2881 tcttcaaact cggcgaagaa gccgcacaac gccgcgccgt cttgttccat cgcttcgcgg
     2941 atgcgggcga tgtcggcttc ggatttgacg gatttgaaga aggtggacgg gttgatgcct
     3001 tcaatcaggc gcgcgctttc gggcaggcgc acgagcgtac tgacggcggt tttgttcggc
     3061 tcgatgagca gcgcgccgcc gatttgcgcg agtttgtcgg caacttgggc gtaaggctcg
     3121 accgtgatac ctgcggtttg cagcgcggcg gcggcttcgg cgttcaggcg gcattgttcg
     3181 gtaaacagga cggcactgtc tttgccgatc agcaggaagg acacgaaaac agggttgaaa
     3241 ggcacgtcgc tgccgcgcag gttggtcagc caagcgatgt cgtcaagcga ggaaaccaag
     3301 tggtaatccg cgcctttttc cgccataact gcgcgcacgc gggcgagttt ctcggcggcg
     3361 gtttcggaga cgtaggcgtg gtcgtggatg aacacggttt cggcggggat agcgggacgg
     3421 cttgtccaca cttggtcaag caggtcgtcg gggtgttgga tgcggatgtt tttggcggcg
     3481 agcgattgcg ccaaagtgcg tttgccggtg agcgacacca tatcggaagg gatgccgacg
     3541 gcagcgtttt cgggcaggtt tgccgcgagc cattcgttgt acggcggcac ttgcccgctt
     3601 ttttgcagct caatgccgct gccggaaagc tgtttggcgg cttgttccca atagcggctg
     3661 tccacccata cgcccgcttc attggcggta acgacgaatg tgccgaccga gccggtaaag
     3721 cctgacaatt cgcgccgcgc ctgccaatgc tcgggcaggt attcggatag gtgggggtcg
     3781 gcggaaggga tgacgagtgc gtccaagcct tgcgccttca tggcttcgcg caatgcggac
     3841 aggtaattcg atacggtatt cataacagtt cctccaatcg ggtttcgcgg cttcagacgg
     3901 catggacgga aatctgaaat gccgtctgaa aaacataacc atattatcaa atcgccagcc
     3961 tgctgcaaaa cggacgggct gatcggatgg tgcgtgtttg cacgaaaaaa agcgatgtaa
     4021 ggttgtttgt tgtaaaattt caggcataaa atgtcgtttc atgccttctt ttggaagtaa
     4081 tacggaaaat atagtcaggt ttgagcatga agttctaata gtgtgtgttg gcaggtattt
     4141 ggattacgtt acaatacgcg ctttcatcaa aatttcccta ccgggcggta tcctgttttt
     4201 gaagacggta ggatttgggt ttgtttgggg tcaatcccgc ccaaattgga gcaatagata
     4261 gggctgtgtc cgaatatgcg gctctgtgtg ttgaaacaca gttaaaaata cggaagactt
     4321 tatgtccgaa caacatattt cgacttggaa aagcaagatc aacgcattgg gaccggggat
     4381 tatgatggct tcggcggctg tcggcggttc gcacctgatt gcctcgacgc aggcgggcgc
     4441 gctttacggc tggcagctcg cgctcatcat catcctgacc aacctcttca aatacccgtt
     4501 tttccgcttc agcgcgcatt acactctgga cacgggcaag agtctgattg aaggttatgc
     4561 cgagaaaagc tgcgtttatt tgtgggtttt tttgattttg tgtatcgcct ccgccacgat
     4621 taacgcgggc gcggtcgcca ttgtaaccgc cgccatcgtc aaaatggcga ttccctcgct
     4681 gatgtttgat gccggcacgg ttgccgcctt gattatggca tcctgcctga ttattttggt
     4741 gagcggacgt taccgcgctt tggatcgtgt ttccaaaatc atcattgtta ctttgagcat
     4801 cgccacgctt gccgccgccg gcatcgctat gtcgcgcggt atgcagatgc agcccgattt
     4861 tatcgagccg acaccgtgga cgcttgccgg tttgggcttc ctgatcgcgc tgatgggctg
     4921 gatgcccgcg ccgattgaga tttccgccat caattctttg tgggtaaccg aaaaacaacg
     4981 catccggcct tccggctacc gcgacggcat tttcgatttc aacgtcggtt atatcgccag
     5041 tgcggttttg gctttggttt tccttgcact gggcgcgttt gtgcaatacg gcaacggcga
     5101 agcagtgcag atggcgggcg gcaaatatat cgggcaattg attaatatgt atgccgtaac
     5161 catcggcggc tggtcgcgcc cgctggtggc gtttatcgcg tttgcctgta tgtacggcac
     5221 gacgattacc gttgtggacg gctacgcccg cgccattgcc gagcccgtgc gcctgctgcg
     5281 cggcagggaa aaacccggca acgccgaact ctttgcctgg aatatttggg tggcgggcag
     5341 cggtttggcg gtgattttct ggttcgacgg cgtaatggcg aatctgctca aatttgcgat
     5401 gattgccgcc tttgtgtccg cccctgtgtt cgcctggctc aactaccgcc tcgtcaaagg
     5461 ggacaaacgc cacaggctta ccgccggtat gaacgccctt gccattgtcg gcctgctcta
     5521 cctggccggg tttgccgttt tgttcctgct gaacctgacg gggcttttgg catagtttcc
     5581 aaaacacgga tgccgtctgc aagattttca gacggcatcg ccctttcttg gaaaaaaaca
     5641 ccgacatcgc gtaaaatacg cgcaaatttt gtgattcggt caggtcgtct gaaacagact
     5701 gcgcctgatt tattttttcg gaaaacccta tgagcgaaca aaaccatccg caaaccgagc
     5761 cgcagttgga cgaaaaccaa atcatcgccc tgcgccgcga aaaactgaac aacatccgcc
     5821 aacagcgcaa cgcttacccc aacgatttca agcgcgacag ctttgccgcc gatttgcagg
     5881 cgcaatacgg cgaaatcggc aaagaagaac tcgacccgca ggccgttccc gttaaaattg
     5941 ccggccgcat gatgctcaaa cgtcaaatgg gcaaagccag cttcgccacc attcaagacg
     6001 ttaccggtca aatccagctt tatctgaaca acaaaggcgt gagtcaggaa gttttggacg
     6061 gcttcaacca ctgggacttg ggcgacatcg tcggcgcgga aggcactttg ttcaaaacca
     6121 accacggcga actaaccgtg cgtgtgtccg acatccgcct gctgtccaaa tccctgcgtc
     6181 cgctgcccga caaacacaaa ggcttgagcg atcaggaaac caaataccgc caacgctacg
     6241 tcgatttgat tgccaatgaa aaatcgcgca atacctttat caaacgcagc caaatcatcc
     6301 aatctgtgcg taattttatg gtgggcgagc attatctcga agtcgaaacc ccgatgatgc
     6361 acccgattcc cggcggcgcg acagcgaaac ccttcgttac ccaccacaat gccttggaca
     6421 ttccgctcta cctgcgcatc gcgcccgagc tgtatctgaa acgcttggtg gtcggcggct
     6481 tggaacgcgt gtttgaaatc aaccgcagct tccgtaacga gggcatgtcc gtgcgccaca
     6541 accccgaatt tacgatgatt gaattttacg aagccttctc cgactacgaa cgtatgatgc
     6601 agatggcgga agacatcatc cgcaacgcat cgcgcacggt aaacggcacg gcaaacatca
     6661 cttacaacgg caaagaagtc gatttggaaa gcccgttcga acgtctgacc atcctcgaag
     6721 ccatcaaaaa atacaatccg cactacaccg acgagcagtt gaacgatgcg gaatggctga
     6781 aaaaagaaat cgtcaaacac ggcgaaagcc tgccgccgtc cccgggcatc ggcagcctgc
     6841 aactcgccct gtttgaaggt tgcgccgagg gcaaactgtg gaatccgacc tttattgtcg
     6901 attacccggt cgaagtttcc ccgttggcgc gcgcttcgga tacgaaacaa ggtctgaccg
     6961 aacgcttcga gcttttcgtt gtcgggcgcg aactggcaaa cggctattcc gagttgaacg
     7021 accccgaaga ccaagccgaa cgcttcaaat cgcaagtggc gcaaaaagat gcgggcgacg
     7081 acgaagccat gcactacgat gccgactaca tccgcgcgat ggaattcggt ttgccgccga
     7141 ccggcggttg cggcatcggc atcgaccgct tagtgatgct gctgaccgat ttgcaaacca
     7201 tccgcgatgt gattctgttt ccgcagatgc gtcccgagta atcatatatt caattaaaaa
     7261 caaaatagta caacactcga cgttgaaggt ttaaccatgg catactctgc ggacttaaga
     7321 aacaaagctt taaaccatag cggattaaca aaaatcagga caaggcggcg ggccgcaggc
     7381 agtacgaatg gtacggaacc gatccgcccg gcgctccatc accttaggga atcgttccct
     7441 tcgagccggg gcggggcaac gccgtaccgg tttttgttaa tccgctatat tacggacaat
     7501 gcaaaaacac cggccaaacc gcagca
//
LOCUS       DAXGCP010000097         7129 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.097, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000097 DAXGCP010000000
VERSION     DAXGCP010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7129
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.097"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..1060)
                     /locus_tag="ACFJCW_001858"
     CDS             complement(<1..1060)
                     /locus_tag="ACFJCW_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLxRFG domain-containing protein"
                     /protein_id="HFC4151929.1"
                     /translation="MSDLVRYNPLEHGRLAGGLKEYRGFTQKDARAAADDTALTRGFK
                     NSMRSARMGWNALTGDKEELGRLKAEDMDYRKIQEGRKSQARRELGEAWDKGAGVGGG
                     LSNVWGELKKDWREKGLDGALEDVGEMGGAVLEQAPNALVPIATATAGGILGALAGGN
                     AAVGAYAGATLGNTLMEYGGQLDRAAEAAGVDPADKDAVMAFIGRGAPGALKNAAVKG
                     AVVGAADMAAMKLGGSILNMGKKAAGKAALEKMGVAAADKAAVAAAKGTPEFAALAAK
                     GSAKGGLGGAARHAAAYATEAAGEFAGEYLGTGLANGEWDEKGAALEAFSSLGHSAVG
                     FAGTKAYAAVTDPLRPPAG"
     gene            complement(1057..2253)
                     /locus_tag="ACFJCW_001859"
     CDS             complement(1057..2253)
                     /locus_tag="ACFJCW_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151930.1"
                     /translation="MGLFEPSAGDFWEMKEKEEKEKARKGAEERERAAAQAHRADVVR
                     RTVANYEAGPARYRNVMDLSRNNIEDGARRLRRAGAFERGADAGLGFSGGDKALSPDA
                     RAGADFARRDTRPTDAGGRTPPPLGFDGNVYRGGKPVRDFDAQRPLVSAKPDALSPEE
                     RELYKRATTPHAGALNGQLTAAQLNAARGIVAEHNKNAADRELGRERLAAAAAENAAN
                     REAVLQKGRFDAAVKANEGALNREMAQRNADRAFDVQQAELGMKRQGFEMKREADALE
                     LEDRKRIADLTRAYGFAKSDGQRGEIARQIDALNGKFERQGEKGFDPNVFKTISYEVA
                     DPDTGLTAKREGIVDLRTGKPLDVEFAGEREKRYAQLGFKPNGQKTAGGKIIYENEKG
                     EKRVEQ"
     gene            complement(2491..4758)
                     /locus_tag="ACFJCW_001860"
     CDS             complement(2491..4758)
                     /locus_tag="ACFJCW_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151931.1"
                     /translation="MEALLMGTDVPETGVLPDKNGEPLTIGEYRLFVGEMMNQPAWRA
                     VADKEMDYADGRQLDNELLQKQRELGLPPAVENLITPTLLSVQGYEATIRTDWRVTAD
                     GETGGRDVADALNFKLNRAERQSRADKACSDAFRGQIACGIGWVEVTRNPNPFEFPYE
                     CGVIHRNAIHWDMKSYKYDLSDARWLIRRRWLLPERLAQFFPEYAGHFKAMGRGGSDW
                     RISGEMLDGGGNTGLADAWGISGRNTVSEEFWFNETTRELAVAEVWYRRWVTADCLRD
                     KKTGRTVEFDGANPNHREMAANGAVLFAASVPRMRRAFVVGDLVVRDEPTPYPHQKFP
                     YVPFFGFREDNTGIPYGYVRNMKYAQDNLNSTNSKLRWGLSAIRTVRTKGIVDMSDEQ
                     FRRNIARVDADIVLNKIEAAQPGARFDVSRDFELSAQHWQMLQDSRATIRQISGITPS
                     FMGNRGNATSGRQESIQVEQSNQSLGLVMDNFRQSRSLVGELLLAMIIEDLGSDEQTV
                     VIEGDAITQGRTVVINRPETDPVTGKAYLSNDLQNIRLKVALEDVPSTNSYRSQQLGA
                     MSEAVKSLPPEYQAAVLPFMVSLMDIPFKDKVIEKIKEVRVQETPEQIEARIAQAVQD
                     ALAKSGNDIKRRELALKEQRTASEIKEIEARAVQIGVQAAYAAMQAGGQIAAMPQIAP
                     VADAVMQGAGYVRPARGDDPGFPVPAMPPETQIPPEGIPEAYGADTGPMTAVPPKSAN
                     HAQTGMETPTVSDNL"
     gene            complement(4743..6017)
                     /locus_tag="ACFJCW_001861"
     CDS             complement(4743..6017)
                     /locus_tag="ACFJCW_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HFC4151932.1"
                     /translation="MTGKTVDLKLPAKLDGLFKPCRYKVMYGGRGGGKSHGAASALLA
                     LGAQRPLRILCAREIQKSMRDSVHRLLKDKVAQLGLGHFYEITDFEIRGANGTLFVFS
                     GLQSHTVDSIKSFEGIDIVWVEEGHGVSKKSWDVLTPTIRKEGSEIWITLNPDMETDE
                     TYRRFIAMPSEDTWLCEINWRDNPWFPEALNRERLKAQRSMNKEDYGNIWEGRPRMVS
                     EGAVYRHEIQDAFHSGRVTLVPYDSSLPVHTVWDLGWNDAMTIGLVQRDLTSVRIIGY
                     IEDTHRTLDWYVAELEKLPYRWGTDFLPHDGRTRNFQTGKSTMEILTGLGRKSVFVQN
                     ATGIEEGIRAARMLFPKVYFDKDKTARLLECLKRYGRQIHAKTGVAMGPLHDEYSHGA
                     DMFRYLAQAVDLMDTGSNTGYTETPVSDWRLY"
     gene            complement(5998..6537)
                     /locus_tag="ACFJCW_001862"
     CDS             complement(5998..6537)
                     /locus_tag="ACFJCW_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151933.1"
                     /translation="MPRLSDEDWRKVELDYRRGVLSIAEIGRKYNVSAQHVGRVAKER
                     VWTRDLNDEVQAKARAMVLSADKNGNAPDYADFNLKQVTDAEAKRVAAVQRRHRNLAE
                     NLSKSAEQIVAELYGSPEDTFTKARMFQTVAAGFKVLVEIERKSYGMDTAESKISESA
                     KTAGIRIEFVGPEDDGKDG"
     gene            complement(6537..6959)
                     /locus_tag="ACFJCW_001863"
     CDS             complement(6537..6959)
                     /locus_tag="ACFJCW_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151934.1"
                     /translation="MSGLSDIDKVYQGVVDLHNAEQVVSREALAETTGLKMSEITKFT
                     KLLVEHGKIYRVTRGIFKPAIGFGETRPVSVSVLDSGMGVLEIGDTVLHLNPQEMRSL
                     GALMSGFGQQFSSIQMGREFSVLRNYLECSAKNGRLDF"
     gene            complement(7024..>7129)
                     /locus_tag="ACFJCW_001864"
     CDS             complement(7024..>7129)
                     /locus_tag="ACFJCW_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC4151935.1"
                     /translation="IMVNRKNKILGLFEHIEDAVKAREAASKDFGFVV"
BASE COUNT         1391 a         2467 c         1685 g         1586 t
ORIGIN      
        1 gtccggccgg cggcctgagc gggtcagtta ccgccgcata agccttcgtt ccggcaaacc
       61 ccaccgcaga atgccccaaa gaagagaaag cctccaaagc cgcccccttc tcgtcccatt
      121 ccccgtttgc cagccccgta cccaaatact cgcccgcaaa ctcaccggcc gcttccgtcg
      181 cataagccgc cgcgtgccgt gccgcaccgc ccaaaccgcc cttggcagac cccttcgccg
      241 ccagcgccgc aaattcaggc gttcccttag ccgccgcaac cgccgcctta tccgccgccg
      301 caacacccat tttctccaac gcggctttcc cggcggcctt tttgcccata ttcaaaatac
      361 tgccgccaag tttcatcgcc gccatatccg ccgcgccgac caccgcgccc ttgaccgccg
      421 catttttcaa cgcacccggc gcaccgcggc cgataaacgc catcaccgca tccttgtccg
      481 cagggtcgac gcccgccgcc tctgccgccc tgtccagctg cccgccgtat tccatcagcg
      541 tattgcccaa ggtcgcgccc gcataggcgc cgacagccgc gttaccgccc gccaaagcgc
      601 ccaatatgcc gccggcggtt gccgtagcaa tagggacaag cgcattgggc gcctgctcca
      661 gcaccgcgcc ccccatctcg cccacatctt ccaaggcgcc gtccaaaccc ttctcgcgcc
      721 agtctttctt aagctccccc cacacattcg acaggccgcc gccgacaccc gcgcccttat
      781 cccaagcctc gcccagctcc ctgcgcgctt gggatttgcg cccctcctga atcttccgat
      841 aatccatatc ctcggccttg agccggccca gttcctcttt gtcgcccgta agggcattcc
      901 accccatacg cgccgaacgc atagaatttt taaacccgcg cgtcaacgcc gtatcgtcgg
      961 cggccgcccg cgcatccttt tgcgtaaagc cgcggtactc cttcaaaccc ccggcaagcc
     1021 gcccgtgttc caacggattg tatctgacca aatcactcat tgctcaaccc tcttctcacc
     1081 cttctcattc tcataaatga ttttaccgcc ggccgttttc tgaccgttcg gcttaaagcc
     1141 caactgcgca taacgcttct cgcgctctcc cgcaaactcc acatccaaag gcttgcccgt
     1201 ccgcaaatcg acaatcccct cgcgcttcgc cgtcaagccc gtatccgggt cggcaacctc
     1261 ataactgata gtcttgaaca cattcgggtc aaagcccttc tccccttgcc gctcaaactt
     1321 cccgttaagc gcatcaatct gccgcgcaat ctccccgcgt tgcccgtccg acttcgcaaa
     1381 accataagcc cgcgtcaaat cggcgatgcg cttcctatcc tcaagctcca gcgcatccgc
     1441 ctcacgcttc atctcaaacc cctgccgctt catccccagc tcggcctgct gcacatcaaa
     1501 cgccctgtcc gcattcctct gcgccatctc gcggttcaac gcaccctcgt tcgccttaac
     1561 cgccgcatca aaccgcccct tctgcaacac cgcctcacgg ttcgccgcat tctccgccgc
     1621 agcggccgcc agcctttccc tgcccaattc cctgtccgcc gcatttttat tatgttccgc
     1681 cacaatcccg cgcgccgcat taagctgcgc cgccgtcaac tgaccgttca aagcccccgc
     1741 atgaggcgta gtcgccctct tataaagctc ccgctcctca ggcgacagcg catccggctt
     1801 ggcagacacc aaaggacgct gcgcgtcaaa atcacgcacc ggcttgccgc cccgatacac
     1861 attcccgtca aatcccaaag gcggcggcgt ccgtccgccc gcatccgtcg ggcgcgtatc
     1921 gcgccgcgcg aaatccgccc cggcccgcgc atcgggggaa agcgccttat cgccgcccga
     1981 aaaccccaaa ccggcatccg caccccgttc gaaagcaccc gcccggcgca accgccgcgc
     2041 cccatcctca atattgttac ggctcaaatc catcacattc cgataacgcg ccggcccggc
     2101 ctcataattc gcaacggtac gccgcaccac atcggcacgg tgcgcctgtg ccgccgcccg
     2161 ctcccgctcc tccgccccct tccgggcctt ctctttttcc tccttttcct tcatctccca
     2221 aaaatccccg gcagacggct caaacaaacc catcgcaaac cctccgaaca aataaagtcc
     2281 aaaataagca aaaacccaag cccaatcaaa cgcctaaagt taagaacaaa caaaaatcgc
     2341 aaccccggac caattaacaa acaacaagtt acacaaaaaa aacacaccga cgggccattt
     2401 ccgggggcaa ataaaaaccg ccttcgtgca aggcggttgc aaaaaagcct ttcatttaac
     2461 gaaaggcttt ttgccgcccg cgtaccgcgt tcagaggttg tccgacaccg tcggcgtttc
     2521 catgcctgtt tgggcgtgat tcgcactctt tggcggcacg gccgtcatcg ggccggtatc
     2581 cgcgccgtag gcttcaggga tgccttcggg cggtatttgc gtttcaggcg gcatggcggg
     2641 gacggggaag ccgggatcgt cgccccgcgc cggcctgaca tatcccgcgc cctgcatgac
     2701 cgcgtcggca acgggggcga tttgcggcat ggcggctatc tgcccgcccg cctgcatggc
     2761 cgcataagcc gcctgcacgc cgatttgtac cgcccgcgct tcgatttcct tgatttcgct
     2821 cgcggtacgt tgttccttga gcgccaattc ccgccgtttg atgtcgttgc cggattttgc
     2881 caatgcgtcc tgcaccgcct gcgcgatacg cgcctcgatt tgttcgggcg tttcctgcac
     2941 tcggacttct ttgatttttt caatcacttt gtctttaaac gggatgtcca tcagggacac
     3001 cataaacggc agcaccgccg cctgatattc gggcggcagg gatttgaccg cctcgctcat
     3061 cgcacccagc tgctggctgc ggtaggagtt ggtgctgggc acgtcttcca aagccacttt
     3121 cagccgtatg ttttgcaggt cgttggacaa ataagccttg ccggttacgg ggtcggtttc
     3181 aggcctgttg atgacgaccg tccgcccttg cgtgattgcg tccccttcta tgacgacggt
     3241 ttgctcgtcc gagcccaaat cctcgataat catcgcaagc agcaactcgc cgaccaatga
     3301 gcggctctgg cggaagttgt ccataaccag ccccagcgac tggttggact gctcgacttg
     3361 gatgctttcc tgcctgccgc tggtggcgtt gccccggttg cccataaatg acggggtaat
     3421 cccgctgatt tgccgtatgg tcgcgcggct gtcttgaagc atctgccaat gctgtgccga
     3481 caattcgaaa tcgcggctga cgtcgaaacg cgcgcccggc tgggcggcct ctattttgtt
     3541 cagcacgatg tccgcgtcca cccgtgcgat attgcggcgg aactgttcgt ccgacatatc
     3601 gactatgcct ttggtgcgta ccgtgcgtat tgccgacaaa ccccatcgta atttgctgtt
     3661 ggtgctgttg aggttgtcct gcgcgtattt catattgcgg acatatccgt aggggatgcc
     3721 ggtgttgtcc tcgcggaatc cgaaaaacgg gacgtaaggg aacttttgat gcggatacgg
     3781 ggtcggctcg tcgcggacga ccaaatcccc cacgacaaag gcgcggcgca tacgcgggac
     3841 ggaagcggca aacaataccg cgccgtttgc cgccatctcc cgatggtttg ggtttgcgcc
     3901 gtcaaactcc accgtgcgcc ctgttttttt gtcgcgcagg cagtctgccg ttacccaccg
     3961 cctgtaccat acttccgcca ccgccagttc gcgcgtggtt tcattgaacc aaaactcttc
     4021 gctgacggtg ttgcgccccg aaatacccca agcgtccgcc agtccggtat tgccgccgcc
     4081 gtcaagcatt tccccgctga tgcgccagtc cgaaccgccg cgccccatcg ctttgaagtg
     4141 tccggcatat tcagggaaga attgcgccag gcgttccggc agcagccagc ggcggcgtat
     4201 cagccagcgg gcatcggaca ggtcgtattt gtaagatttc atatcccaat ggatggcgtt
     4261 gcggtggatg acgccgcact cataaggaaa ctcgaaaggg ttggggttgc gtgtaacctc
     4321 cacccagccg atgccgcagg ctatctgccc cctgaacgcg tccgaacaag ccttgtcggc
     4381 acggctttgc cgttccgcgc ggttgagttt gaagttcaat gcgtccgcca cgtcccgccc
     4441 gccggtttcg ccgtccgccg tcacgcgcca gtccgtccgt atcgtcgcct catatccctg
     4501 taccgacagc agggtcgggg taatcaggtt ttcaacggcg gggggcaggc ccaactcgcg
     4561 ctgtttctgt aaaagctcgt tgtcaagctg cctgccgtcg gcgtagtcca tttccttgtc
     4621 ggcaacggca cgccatgcag gttggttcat catttcaccg acaaacagcc ggtattcccc
     4681 gatagtcagc ggttcgccgt ttttatcggg caatacgcct gtttccggta cgtccgtccc
     4741 catcaataaa gcctccaatc cgaaacgggc gtttccgtgt atcccgtatt gctgcctgta
     4801 tccattaaat caaccgcctg cgccaggtag cggaacatat ccgcgccgtg cgaatattcg
     4861 tcgtgcagcg gccccattgc cacgcctgtt ttcgcatgta tttggcggcc gtaccgtttc
     4921 aggcattcca aaagccgcgc tgttttgtct ttatcgaagt acactttggg aaacagcatc
     4981 cgcgccgccc tgatgccttc ttcgataccg gtcgcgtttt gcacgaaaac cgacttgcgc
     5041 cccagtccgg tcaaaatctc catcgtactt ttgcctgttt ggaagttgcg cgtcctgccg
     5101 tcgtgcggca ggaagtccgt cccccaccgg tagggcagct tttccaattc ggcaacatac
     5161 cagtccaacg tccggtgcgt gtcttcgatg tagcctatga tgcgcacgct cgtcaaatcg
     5221 cgctgcacca gcccgatggt catggcatcg ttccagccca aatcccaaac cgtatgcacg
     5281 ggcaaagaag aatcataagg gacgagcgta acgcgtccgg aatgaaaagc gtcctgtatt
     5341 tcatgccggt aaaccgcccc ctccgatacc atgcgcggcc tgccttccca aatattcccg
     5401 tagtcctctt tattcatcga acgctgtgct ttgagccgct cccggttcaa tgcttcggga
     5461 aaccacggat tgtcgcgcca gttgatttcg caaagccaag tgtcttcgga cggcatagcg
     5521 ataaaacgcc ggtaggtttc gtccgtctcc atatcgggat tgagggtaat ccaaatttcc
     5581 gaaccttctt tgcgtatggt cggcgtgagc acgtcccagc tttttttact gacgccgtgc
     5641 ccttcctcaa cccatacgat gtcgatacct tcaaacgatt tgatgctgtc cacggtatgc
     5701 gactgcaggc ccgaaaatac aaacagcgtg ccgtttgcgc ctcgtatctc gaagtcggtt
     5761 atttcgtaga aatgccccaa acccaactgc gccactttgt ctttcaacag gcggtgtacg
     5821 gaatcgcgca tcgatttttg aatttcgcgc gcgcataaaa tacgcaaagg gcgttgcgcc
     5881 cccagcgcca gcagtgcgga tgccgcgccg tgcgatttgc cgccgccgcg cccgccgtac
     5941 ataaccttgt accggcaagg cttgaacagc ccgtccagtt ttgcgggcaa tttcaaatca
     6001 accgtctttc ccgtcatctt caggccctac aaattcgata cggatgcccg ccgtcttggc
     6061 ggattccgaa atcttcgatt cggcggtatc cataccgtat gatttacgct cgatttccac
     6121 caaaacctta aaccccgccg ccaccgtttg gaacatacgc gcctttgtga atgtgtcctc
     6181 cgggcttccg tacaattccg cgacaatctg ctccgcgctt ttggacaggt tttccgccaa
     6241 attccgatgc ctgcgctgta cggcggcaac ccgtttcgct tccgcgtccg ttacttgttt
     6301 aaggttgaaa tccgcataat ccggcgcatt gccgtttttg tccgcggaca gcaccatcgc
     6361 ccgcgccttt gcctgtacct cgtcattcaa atcgcgcgtc cacacgcgtt ctttggcaac
     6421 cctgccgacg tgttgcgccg aaacattgta tttgcgcccg atttcggcaa tgctcaaaac
     6481 cccgcgccgg taatccagct cgactttgcg ccaatcctca tctgacaatc tcggcattaa
     6541 aaatccaacc tcccgttttt ggcggaacat tccagataat tccgcaacac tgaaaactcg
     6601 cgccccatct gaatactgga aaactgctgt ccgaaccccg acatcaaagc ccccaacgag
     6661 cgcatttcct gcgggttgag gtgcaatacc gtatcgccta tttccaatac gcccatcccc
     6721 gaatccaata ccgatacgct gacggggcgc gtctcgccaa accctatggc gggcttgaaa
     6781 atcccccttg tcacgcggta gattttgccg tgctcgacca gcagcttggt aaatttagtg
     6841 atttccgaca ttttcaggcc ggtcgtttcc gccaaagcct cgcggctgac cacctgctcc
     6901 gcgttgtgca aatccacaac cccctggtac accttgtcaa tatccgacaa tcccgacatc
     6961 aaatcaaact cctaaacatc ccaaacgatt ccaaactcta ccgccgcccg cgattgcagg
     7021 cggttacact acaaagccaa aatctttaga tgctgcctct ctcgctttca ctgcatcttc
     7081 aatatgttca aataaaccta atattttatt ttttctatta accataatc
//
LOCUS       DAXGCP010000098         7026 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.098, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000098 DAXGCP010000000
VERSION     DAXGCP010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7026)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7026)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7026
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.098"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            419..865
                     /gene="yciA"
                     /locus_tag="ACFJCW_001865"
     CDS             419..865
                     /gene="yciA"
                     /locus_tag="ACFJCW_001865"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HFC4151936.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVEVWVKTL
                     MNDCVTEDRHLVTEAVFTYVAIDAEGNPRPIPKEGNPKLSGLLATP"
     gene            complement(916..1737)
                     /locus_tag="ACFJCW_001866"
     CDS             complement(916..1737)
                     /locus_tag="ACFJCW_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HFC4151937.1"
                     /translation="MAVLITGASAGFGEAMCRTFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSCRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDNERVAGVYEGVEFIRPEDIAETALW
                     LYRRPAHMNVNTIEIMPVAQTFAGMKVIKTAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1856..2314
                     /locus_tag="ACFJCW_001867"
     CDS             1856..2314
                     /locus_tag="ACFJCW_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HFC4151938.1"
                     /translation="MKTQISLAATALALFLSACGNGGAPAQPKGEISENRTAAFKSMM
                     PDFSRMGKMVKGEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2457..3593)
                     /gene="lst"
                     /locus_tag="ACFJCW_001868"
     CDS             complement(2457..3593)
                     /gene="lst"
                     /locus_tag="ACFJCW_001868"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HFC4151939.1"
                     /translation="MGLKKVCLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGKPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFYLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTNNLIRESSYLGGEFAVNGAIKRNFARMMVGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTALNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFRQADIPILAFDDKNQSHGKSK"
     gene            complement(3598..3858)
                     /locus_tag="ACFJCW_001869"
     CDS             complement(3598..3858)
                     /locus_tag="ACFJCW_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151940.1"
                     /translation="MAALFALCSILACLNAAAGKEGGNGFPAFGGGVGGVVPDVRRHI
                     FGKINFNIRQLSEYLLKFRIFRTGVSAPGHSGRMFNLSEWSF"
     gene            3937..6162
                     /locus_tag="ACFJCW_001870"
     CDS             3937..6162
                     /locus_tag="ACFJCW_001870"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HFC4151941.1"
                     /translation="MTQKSTIVYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPGANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPDATSVSIVFTDKQGNKKELREPVALK
                     AGEIIDAAVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLIANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVIDAAGNVLMQHD
                     VEAGGIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     AKAQVLADTLDAATEKLLLNDKSPKRKAGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAAALTADEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQVLNA
                     L"
     gene            6459..6761
                     /locus_tag="ACFJCW_001871"
     CDS             6459..6761
                     /locus_tag="ACFJCW_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151942.1"
                     /translation="MKTVPTILTGILLATALPASAHGMHKSKPLAMDELPPICQQYFK
                     RTETCYNKAGNKADFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRNLNCE"
BASE COUNT         1859 a         2091 c         1576 g         1500 t
ORIGIN      
        1 accgtagtct cgaaacccgt ccgacaacac cgcaatctcg aaacccgtca ttcccgcgca
       61 ggcgggaatc cggacctgtc cgcacggaaa cttatcggat aaaacggttg cccaaacccc
      121 gcgtcctaga ttcccacttc cgtgggaatg acggttcggt tgcgttccga caacaccgca
      181 atctcgaaac ccgtcattcc cgcgcaggcg ggaatgacgg ttcggttgct tagggtagga
      241 tttggcggga ttggtgggct gaagcccgcc ctacgcatcc gccctacaat actccttgcg
      301 aatctgtccc gcgcccgacc ttgtatgtct caaatgggtt aaactacgca cttcccgact
      361 tcccgtttcg ggcaggggtg caggtccgat ttatatttca ataaaacaag gaaactttat
      421 gcagcacgaa gaaggcaacc gccaacgccc tcaaggcgaa ctgctcctgc gtaccgtcgc
      481 tatgccgcgc gataccaatc ccaaccaaga cattttcggc ggctggatta tgtcgcaaat
      541 ggatttgggc ggcggcatat tggcggcgga aatcgcgcgg gggcgcatcg ttaccgtcgc
      601 cgttcaggaa atgaacttca tccgcccggt caaggtcggc aacgtcgtct gctgctacgg
      661 gcattgcgtc cgcgtgggca atacttccct ccagcttaaa gtcgaagtct gggtgaaaac
      721 tttgatgaac gattgcgtta ccgaagaccg ccatctcgta accgaggcgg tgttcactta
      781 tgtcgccatc gatgcggaag gcaatccgcg cccgattccg aaagaaggca accccaaatt
      841 gtcaggctta ttggccaccc cgtaagaata cccgtaaaaa tgccgtctga aactgtcttc
      901 agacggcatt ccgtatcatt tgaaccaaga cctgatgcgg gaaaacagcg acatactctg
      961 tttttcaaag tcttcccgca cttcgggcac ggctgttttt atgaccttca ttcctgcaaa
     1021 agtctgcgcc acaggcataa tttcaatcgt gttcacattc atatgcgccg gccggcggta
     1081 cagccacaat gcggtttccg caatatcttc ggggcggata aattccacac cctcatacac
     1141 gcccgccacc ctctcgttat cgcctttgaa gcgcacgttg gaaaactccg tattgccgca
     1201 caaacccggc tcgatattgg taacgcggat gttcttatcc gccagctctg cgcgcaaatt
     1261 caggctaaac tggcgcacaa acgccttggt cgccccgtaa acgttgctgc cggcataagc
     1321 ataattgcct gcaatcgaac ccaaattcat cacataaccg ccgccgcgtt ccaccatttg
     1381 cggcaaaatc ttgcgcgtca ggaacgtcaa acccaaaaca ttggtttgaa tcattgtttc
     1441 ccaatcttca aaatccgcct tgtccgccgt gtccaaaccc aaagccagcc cggcattgtt
     1501 gatgaggcag tcgatgtcgg aaaattcatc ggggatgccg ttcaaggcgt tttccaccga
     1561 ctcgcggcac gacacgtcca tttccaaagg gtaaaacaaa gcacccaatt catccgccaa
     1621 agcctgaagc ctgtccgcac ggcgcgccgc accgataacg cggtatcccg ccccgacaaa
     1681 cgtgcggcac atcgcttcgc cgaagcctgc cgaagcaccg gtaattaaaa cagccattgt
     1741 ttttcctttc tttctcgttt cccaaacctg tttcaggtat cataacaccc ttcagacggc
     1801 atcgcgccgg ctgaaaacga caacaaccgt accaccacga caggacacat tcaacatgaa
     1861 aacccaaatc agccttgccg caaccgccct cgccctattc ctttccgcct gcggaaacgg
     1921 cggcgcgccc gcacagccca aaggcgaaat ttccgaaaac cgcaccgccg cgttcaaatc
     1981 tatgatgccc gacttctcgc gtatgggcaa aatggtcaaa ggcgaagagc cttacgatgt
     2041 cgaaaaattc aaacaggcgg cggcggcgtt tgccgaaagc agcaaaaaac cgttcacact
     2101 ttttgagtcc gatccgcaag gcaacggccg cgccctgcct gccgtttggt cggatggtgc
     2161 aaaatttgaa gccgaaaaaa caaaattcgc cgccgccgtc gaaaaactca acgccgccgc
     2221 ccaaaccggc aaactggacg aaatcaaagc cgcctacggc gaaaccggcg caagctgcaa
     2281 atcctgccac gacagtttcc gcgcgcccga ataacatccg aaacagaaca atgccgtctg
     2341 aatccttcag acggcatttt ctttgtcatt tcgccacgcg caaagcaatc ggaaattatc
     2401 ttcaattcaa aaaatacgcc atatcctgat ttttgcctta cttactccgc cattttctat
     2461 tttgatttac catgcgattg atttttatcg tcaaatgcca aaatcggaat gtcggcctga
     2521 cggaacagcg cataaacggg cttgagccaa taatcttccg gaagggaagc cggtttcaat
     2581 gcgtaaacgt gcacattggg aaaatccttc atcgtcaacg ccgcaccgct gaaaaaggta
     2641 taaatttcat acctcgtatg cgggtttttc ttaatttcgc gcaaaatata gtcttcgatg
     2701 acatagggcg aatttaacgc ggttacgccg gaaagcccgt aggtctggcg gggatgcggc
     2761 gcgacatatt gtatgttgaa attttttgcc gccttttccg aaatttcctt catctctttg
     2821 tcgggcgaac ccaaaagtat ccgcaccgtg ccgcccgttt cgtcccccgc cttcagttcg
     2881 gacgcatcga acagcggcag gtaagtcatc ttgcggcggc cgtcatccat aatgtttttc
     2941 aaacccttga atatcgtgta atgctcgtcg gaagcattgc gggttttggc gatgctccaa
     3001 tccccgacca tcattcgggc aaaattccgc ttaatcgccc cgtttacggc aaactcgccg
     3061 cccaaatagc tgctctcccg tatcaggttg tttgtgccgt cgtcaaaggt tttgatttcc
     3121 gcatccgggt aagtactcaa aaaggcggca atactgactt tttccaaact cgccaaataa
     3181 atccgcttga ccttcggcag cagcatcgac ttcaccttca gctccgccat cgtcggaatg
     3241 aaattaaacg atttgttcaa accgtagggc aggtagaaaa aatacgcccg ctccgcctta
     3301 tcctttatct gattgaaata ataatcgtat ttttcattcc tgttttcaga catcagcacc
     3361 acataaaacc gctcccccgg atgctgcgcc ataatccttt ctgccacctt catctgcaat
     3421 atggtatagc agaaaatcag attgacgggt ttcccctctt cattgaagag tttgtccttc
     3481 agcagggaaa ccgcgttcct ttccccctga tttacccggt caaacgtata aaatatcccg
     3541 aagcaaaaaa caatcaggca caacacggtc aaacagactt ttttcaaccc catatcccta
     3601 aaaactccat tccgacaaat tgaacatacg ccccgagtgt cccggtgcgg aaactccggt
     3661 gcggaaaatg cggaatttta gcagatattc cgacagttgc cgaatattaa aattaatttt
     3721 accgaaaatg tgccgccgca catcaggcac aacgccgccg acgccgccgc caaacgcggg
     3781 aaagccattt cccccttcct ttcccgccgc cgcgttcaaa cacgccaaga tcgaacaaag
     3841 cgcgaacaaa gccgccaaaa tatgccataa tagccgcgca cattccccgc gcaatgtgtt
     3901 tcaaaagaaa aaaccaacct acaagagaat aatcctatga ctcaaaaatc caccattgtt
     3961 tatacccata ccgacgaagc ccccgcgctg gcgacccaat cgctgctgcc gattgtgcag
     4021 gcgtttgccc gccacgccga tattgatgtc aaaactgccg acatttccct gtccggccgc
     4081 attttggcgg cattccccga atatctgacc gaagcgcagc gcgtacccga cgcgcttgcc
     4141 gaattgggcg aactggtgaa acaacccggt gcaaacgtaa tcaaactgcc gaacatcagc
     4201 gcatccgtac ctcaactgac cgccgcgatt aaagaattgc agtctaaagg ctttgccgtt
     4261 cccgactatc ctgccgaccc tcaaaccgat gaagaaaaag ccgtacgcga acgctacgac
     4321 cgcatcaaag gcagcgcggt aaaccctgtc ctgcgcgaag gcaactccga ccgccgcgcg
     4381 cctaaagcgg tgaaaaactt tgccaaaaaa aatccgcaca gcatgggcgc gtgggcgaaa
     4441 gactccaaaa cccacgttgc caccatgcaa agcggcgact ttttccataa cgaacaatcc
     4501 gttaccgtac ccgatgcgac ttccgtatcc atcgtgttca ccgacaaaca aggcaataaa
     4561 aaagagctgc gcgagcctgt tgccctgaaa gccggcgaaa tcattgacgc ggccgtaatg
     4621 agcaaaaaag ccctgctcgc cttccttgcc gaacaagtga aagacgcaaa agctaaaggc
     4681 gtattgttct cgctgcatat gaaagccacg atgatgaaag tgtccgaccc gattatcttc
     4741 ggacacgccg tcaaagtgtt cttcgcgcct gtatttgaaa aattcggcgg caaactggct
     4801 gccgcaggcg tcaacgtcaa caacggcttc ggcaacctga ttgccaatct ggacaaactg
     4861 gatgcggaca cccgcgccgc cgtcgaagct gaaatcgccg ccgtttacgc cgccaaccct
     4921 gatttggcga tggtcgattc cgacaaaggc atcaccaacc tgcacgttcc cagcgatgtc
     4981 atcgttgatg cttctatgcc tgcgatgatc cgcaattccg gccgtatgtg ggacaaaaac
     5041 ggcaaagcgc aagacaccaa agccgtgatt cccgacagca gctatgccgg tgtttaccaa
     5101 gcaaccatcg atttctgccg cgaacacggc gcattcgatc cgacaacaat gggtactgtg
     5161 cccaacgtcg gactgatggc gcaagcggcg gaagaatacg gctcacacaa caaaaccttt
     5221 gaaatcgaag ccgacggtca ggttcaagtg attgatgcgg cgggcaatgt cctgatgcag
     5281 cacgacgttg aggcaggcgg catctggcgc atgtgccaaa ccaaagacgc tcccgtcaaa
     5341 gactgggtac aactcgccgt caaccgcgcc cgcctgagca acacgcccgc cgtgttctgg
     5401 ctcgacgaaa accgtccgca cgacaagagt ctgctcgcca aagtcaaagc ctaccttgcc
     5461 gaattggata ccaacggcct cgacatccgc gtcctcgcgc ccgaagaagc cgctaaattc
     5521 agcttgggcc gtctgaaaaa cggcgaagac accatttccg taaccggcaa cgtcctgcgc
     5581 gattatctga ccgacttgtt cccgattttg gaactgggta ccagcgcgaa aatgctgtcc
     5641 atcgttccat tgatgaacgg cggcggtatg tttgaaaccg gcgcgggcgg ttctgcaccg
     5701 aaacacgtcc aacagttcct cgaagaaaac cacctgcgtt gggactcatt gggcgaattc
     5761 ctcgcgcttg ccgtatcgtt tgaacatctg gcgcaaaaaa ccggcaacgc caaagcccaa
     5821 gtcctcgccg acactttgga tgccgccacc gaaaaactgc tgttgaacga caaatcgccc
     5881 aaacgcaaag cgggcgaact cgacaaccgc ggcagccatt tctacctcac cctctactgg
     5941 gcgcaagaat tggcggcgca agacaaagat gccgaactga aagccgcatt tgctccattg
     6001 gcagccgctt tgactgccga cgaagccaaa atcgttgaag aactctctgc cgtacaaggc
     6061 aaagcggtcg acatcggcgg ctactacgca gccaatcctg aaaaagccgc acaagcgatg
     6121 cgtccgagcg caacctttaa tcaagtacta aacgccttat aagcacaaag gcaaaaatgc
     6181 cgtctgaaca ttcgtcgttc agacggcatt agttatccct atctgcctga ttatgattaa
     6241 acgccgcacc cattggatat atagtggatt aacaaaaacc agtacggcgt tgccccgcct
     6301 tagctcaaag agaacgattc tctaaggtgc tgaagcacca agcgaaccgg ttccgtacta
     6361 tttgtactgt ctgcggcttc gtcaccttgt cctgattttt gttaatccac tataaatcat
     6421 ataatcttta gttttttacc ctacggaaag acaataatat gaaaactgtt ccaaccatcc
     6481 tgaccggcat ccttttggca accgcccttc ccgcatccgc acacggtatg cataagagca
     6541 aacccctggc tatggacgag ctgccgccga tttgccaaca atatttcaaa cgcaccgaaa
     6601 cctgttacaa caaagccgga aacaaagcag atttcgcacg caacaacacc aaattcctat
     6661 tccaagccct acctgccgcc gatttgggac agcgtaagca aatgtgccaa atcgctatgg
     6721 attcgtttgc agaaaaaacc cgcaatctga attgcgaata aagccgcatc agcaatagca
     6781 atgccgtctg aaacaaaggt tcagacggca ttctcacatc aaaacgtacc ggctgataaa
     6841 acccgccttc cccgcatccc tgacccgaac aggattaaac ggagtaacgg tttcggccat
     6901 tatggcaagt ccccatccca aaaatgacca tataaattaa taccataaaa cattgataaa
     6961 aagcgtctgc cggttgcggt ttgttgcagg gcgttacgga aaatcatctt aaaccgatga
     7021 ttttta
//
LOCUS       DAXGCP010000099         7025 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.099, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000099 DAXGCP010000000
VERSION     DAXGCP010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7025)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7025)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7025
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.099"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            20..910
                     /gene="ubiA"
                     /locus_tag="ACFJCW_001872"
     CDS             20..910
                     /gene="ubiA"
                     /locus_tag="ACFJCW_001872"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HFC4151943.1"
                     /translation="MNLKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQFYLGLAFSFGIP
                     MAFAAVGNSVPVEAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFAAIFAHTFFAK"
     gene            1095..1544
                     /gene="ptsN"
                     /locus_tag="ACFJCW_001873"
     CDS             1095..1544
                     /gene="ptsN"
                     /locus_tag="ACFJCW_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HFC4151944.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHASVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVASAEEARAILTEE"
     gene            1548..2510
                     /gene="hprK"
                     /locus_tag="ACFJCW_001874"
     CDS             1548..2510
                     /gene="hprK"
                     /locus_tag="ACFJCW_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HFC4151945.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANDLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            2491..3345
                     /gene="rapZ"
                     /locus_tag="ACFJCW_001875"
     CDS             2491..3345
                     /gene="rapZ"
                     /locus_tag="ACFJCW_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HFC4151946.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDLGYFCVDNLPLEMLPSLVSYH
                     IERADETELAVSVDVRSGIDIAQAREQIAYLRGLGHRVEVLFVEAEEAVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVVLESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLAQEM
                     VDGIERFVTRWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLSGR"
     gene            3426..4367
                     /gene="ylqF"
                     /locus_tag="ACFJCW_001876"
     CDS             3426..4367
                     /gene="ylqF"
                     /locus_tag="ACFJCW_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HFC4151947.1"
                     /translation="MAIQWFPGHMNKARKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGAVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDDNSWLEWIAKKRGAVLSGGRVNYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPSEA"
     gene            4371..4502
                     /locus_tag="ACFJCW_001877"
     CDS             4371..4502
                     /locus_tag="ACFJCW_001877"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151948.1"
                     /translation="MPSEKYFSGSFSLLQPISDGISKPMPFQHGYPYDRQNFSRRAD"
     gene            4468..5070
                     /locus_tag="ACFJCW_001878"
     CDS             4468..5070
                     /locus_tag="ACFJCW_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HFC4151949.1"
                     /translation="MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLIEMPPTDEEEPETVPSDTLPN"
     gene            5254..6927
                     /gene="recN"
                     /locus_tag="ACFJCW_001879"
     CDS             5254..6927
                     /gene="recN"
                     /locus_tag="ACFJCW_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HFC4151950.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPALKAELREQGLLDEGGEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKAVGGQLIDIHGQNDHHSLNQEAAQRELLDAFVGGRVQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGHSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAGRLSSETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRALGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDEIQRIEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
BASE COUNT         1754 a         1834 c         1865 g         1572 t
ORIGIN      
        1 acttatatga aagagggtta tgaatcttaa atccccttta tttttacgac tgtccgatcg
       61 tttggacgtt tatatcagac tgatgagggc ggacaagccc attgggacgc tgcttttact
      121 gtggccgacc tactgggcat tgtggctggc ttcagacggc attcccgatt tggcggtatt
      181 ggcggcgttt acaatcggca cgtttttaat gcgcagtgcc ggctgcgtca tcaacgactt
      241 tgccgaccgc gattttgacg gtgctgtcga gcgcaccaaa aaccgtccgt tcgcacaggg
      301 cagggtcaag aaaaaagaag ccctgctgct gacggcattt ttgtgtctgc ttgccgcatt
      361 gtgcctgatt ccgctgaatc atctgacatg gctgatgagc ctgcccgcgc tgttccttgc
      421 gctgacttac ccgtttacca aacgcttttt tccgattccc caattttatc tgggacttgc
      481 cttttccttc ggcatcccga tggcgtttgc cgcagtgggc aacagcgttc ccgttgaagc
      541 gtggatactc tttgccgcca atgttttatg gacactggct tacgataccg tctatgcaat
      601 ggcggacaaa gaggacgatt tgaaaatcgg catcaaaacc tccgccgtca cgttcgggcg
      661 ttacgacatc gccgccgtta tgctgtgtca tggcggcttt accctgctga tggcagtatt
      721 gggtgcggtt atcggtgcgg catgggcata ttggacggca atccccatcg tcctgctgct
      781 gcaataccgc caatatgccg ccatcaaaag ccgcgtccgg caaatctgtt ttgaaacgtt
      841 tttggcaaac aacagaatcg gttgggtgtg gtttgccgct atttttgccc atacgttttt
      901 cgcgaaataa ggcagggcaa tgccgtctga agaaccgtaa actgctttgg acggcatttc
      961 tatctgtgcc gaaaagcgtt aaaatatgtt tttgaaacgc tgtgttatgt cagcccgtgc
     1021 cgtatgcggg attgaggttt gccccggcag tcggtacaat ccttctgttt tgcgatgtct
     1081 gaaaagagaa gcttatgagc cttatcggcg aaattttgcc tttgtcccat attgttttgg
     1141 atatggaggt gggcagtaaa aaaaggctgt ttgaggaagc cggcctgctt ttggaacgcg
     1201 aatcctcatt gtcccatgct gatgttttcg aatgtctttt tgcccgtgaa aaactcggtt
     1261 cgaccggttt ggggcagggt gtcgccatcc cccacggccg ccacgcgagc gtgaagcagg
     1321 cgacgggcgc gttcatccgt acgcgcgaac ccgtcggatt cgacgcgcct gacggcaaac
     1381 cggtttcact ggtttttatc ttgctggtgc cggaaaacgc aacgggcgag catttggaag
     1441 tcttatccaa actggccggc aagttttccc aaaaaagcat cagagaatcg ctgatgacgg
     1501 ttgcttctgc ggaagaagcc cgcgccatcc tgaccgaaga ataaaatatg cccagtatct
     1561 ccgtccgccg cctgtttgac gacaaccaat acaagttgca acttgcctgg gccgccggca
     1621 attcgggtgc ggacaaccgt atcggcgtag aggcggacaa gcccgtcctc gccctggtcg
     1681 gacacctgaa tttcatccat cccaaccaaa tccaagtggt cggtttggcg gagtcggaat
     1741 atctgaaccg cctcgaatcg ggggagacgg gttatcagtt cggagacctg ttcgatattt
     1801 ccatgtcttt ggtcattgtg gcaaacgatt tgccggtttc cccggggctg cgcgactact
     1861 gccacaaaaa cgacatcccc ctgttgactt ccaaactcga aagcccttat ctgatggatg
     1921 tgttgcggat ttacctgcaa cgcaccttgg cagcatcgtc cgtcaaacac ggcgtatttc
     1981 tcgatgtgtt tgaaatcggc gtgctgatta ccggacattc tggtttgggt aagagcgaat
     2041 tggcattgga actgatttcg cgcggccata gcctgattgc cgacgatgcg gtcgagctgt
     2101 tccgcatcgg tccggaaaca ttggaagggc gttgttcgcc tatgctgcgc gattttttgg
     2161 aagtgcgcgg cttggggata ctcaatatcc gccatatttt cggcgaaact tccatccgcc
     2221 ccaaaaaaat cctgcaactc attatcaatt tggtcgaggc ggacgacgag tatatgaagc
     2281 agctcgaccg gttgagcatc cgcaccgaaa ccgaatccat cctcaacgtc aacgtccgtt
     2341 cggttacgct gcccgtcgcc gtcggacgca accttgccgt tttggttgag gcggcggtac
     2401 gcaattacat tttgcagttg cgcggcaaag acagtacgcg cgaatttttg gaacgccatc
     2461 agacgcaact taaagaaaac gaacagaatc atgaaaatcg tcctgattag cgggctttcc
     2521 ggctcgggca aatccgttgc actgcgccaa atggaagatt tgggctattt ttgcgtggac
     2581 aacctgccct tggaaatgct gccgtcgctg gtgtcgtacc atatcgaacg tgcggacgaa
     2641 accgaattgg cggtcagcgt cgatgtgcgt tccggcatag acattgccca agcgcgcgag
     2701 cagattgcct atctgcgcgg actcggacac agggtggaag ttttgtttgt cgaggcggaa
     2761 gaggccgtgc tggtccgccg cttttccgaa acccggcgcg gacatccttt gagcaatcag
     2821 gatatgacgc tgttggaaag cctgaaaaaa gagcgcgaat ggctgttccc gcttaaggaa
     2881 atcgcctact gtatcgacac ttccaagatg aatgcccaac agctccgcca tgcagtccgg
     2941 cagtggctga aggttgagcg taccggactg ctggtggttt tggagtcctt cgggttcaaa
     3001 tacggtgtgc cgaacaacgc cgattttatg ttcgatatgc gcagtctgcc caacccgtat
     3061 tacgatcccg agttgaggcc ttacaccggt atggacaagc ccgtttggga ttatttggac
     3121 ggacagccgt tggcgcagga aatggttgac ggcatcgaaa ggtttgttac gcgttggttg
     3181 ccgcgtttgg aggatgaaag caggagctac gttaccgtcg ccatcggctg taccggcggg
     3241 cagcatcgtt cggtctatat tgtcgaaaaa ctcgcccgaa ggttgaaagg gcgttatgaa
     3301 ttgctgatac ggcacaggca ggcgcaaaac ctgtcgggcc gctaatcccg tcaaaccatt
     3361 atgccgtctg aaaccccgtc cgccgtttca gacggcattt caaatattga gaagaaagaa
     3421 cagacatggc aatccaatgg tttcccggcc atatgaacaa ggcaagaaaa gccatcgccg
     3481 agcgtgccaa aagcgttgat atggtgattg aaatgctgga cgcgcgtatg cccgcctcca
     3541 gcgaaaatcc actgttggcg cagctttcca aaggtaagcc caaactcaaa attttaaaca
     3601 agcaagacct tgccgaccct gaacgcacaa aggtctggct tgaccactac aacagccgcc
     3661 ccgacacccg ggccatcgcc ctcgattcct ccgaaaccgg cgcacacggc aaaatcaccc
     3721 aagcctgccg cgcgatgatt ccccaccggc aaggcataga caaacccctg cgcgttttga
     3781 tttgcggcat tcccaacgtc ggcaaatcca ccctcatcaa tggaatgata ggcaaaaaat
     3841 ccgccaaaac cggcaacgaa cccggcatta ccaaagccga acaacgcctt ttccttgccg
     3901 acgacttctg gctgtacgac accccgggaa tgctgtggcc gaaaatcatc gtcgaagaaa
     3961 gcggctacaa cctcgccgcc ggcggcgcag tcggacgcaa cgcattggac gaagaagaag
     4021 tcgccctcga acttttagac tacctccgcc gccactacct ccctatgctg caagaacgct
     4081 accaagccga caaagacccc agcagccact gggacgacaa ctcgtggctc gaatggatag
     4141 ccaaaaaacg cggcgcagtc ctcagcggcg gacgggtcaa ctaccaaaaa gccgccgaaa
     4201 acatcctcac ggacttccgc gaaggcaaaa tcggcagaat cacccttgaa acaccgaacc
     4261 aatgggaaac ttggcttaaa aaagcacgtc agaaagaagc cgaactcaaa gccattcgcg
     4321 aagccagaaa agcagagcgc aaagggcaga agccttcgga agcataaaga atgccgtctg
     4381 aaaaatattt ttcaggcagc ttctctctac tccaaccgat ttcagacggc atatccaaac
     4441 ccatgccgtt tcagcacgga tacccgtatg accgacaaaa tttctcccga cgcgctgatt
     4501 gaagccgcac tgctgaccca aaccgaaccg ctgaccgaaa aatctatgcg cgaactgtgt
     4561 gtgccgccgt tgtcgcaaga caaactgatt gatgtgttgg cgcagttgaa aacgcgttgg
     4621 caggataggg cgttgcaact ggtgcatacg caggagggct ggcgttttca gattgttcag
     4681 acggcattcg agcggctggg cagcctgcaa gaacagcgtg cgccgcgcta ctcccgcgcc
     4741 gtgatggaaa cactggcgat tatcgcctac cagcagcccg taacgcgcgg cgacatcgaa
     4801 ggtatacgcg gcgtggcggt gtcgcagaac gtgatgcaga ccttgcagga tcgggggtgg
     4861 attgaagtca tcggacatcg ggacacattg ggaaaacccg cattgtgggc aacaacggca
     4921 acttttctca gcgatttgcg cttggacggt ttggaagaac tgccgccgct gaccgaactg
     4981 ggcgaactgg ttttgcccga tttgatagaa atgccgccta cggatgaaga agagccggaa
     5041 accgtaccgt ccgataccct gcccaactga aattccaaat gccgtctgaa acgcacattg
     5101 cttcagacgg cattgcaaca aataagcaga taaaaacaaa cactaagcaa aattaaggaa
     5161 aaacttattt ttaatttaaa aaatcttaga tataattcgt atatctaaag ttgatattgc
     5221 ttttgtcggt agaattgcta aggaatcctc acaatgcttc taacactttc tttgcgtgat
     5281 tttgtcattg tcgaaaatct gaatctggat tttcaaagcg gttttaccgt tttgaccggc
     5341 gagaccggcg cgggcaagtc cattactttg gatgcgattg gtctgctgtt gggcgataag
     5401 gccgattaca gccaagtccg cagcggtgca aaagaagcgc agctgtcggc attgttcgat
     5461 atttcccatt tgcctgcttt aaaagcagaa ttgcgtgaac aagggctgtt ggatgagggc
     5521 ggggaagaac tcagtatccg ccgcattatc gatgccaaag gcaaaagccg cagttttatc
     5581 aacaatcagg cggctacctt ggcgcaactc aaagccgtcg gcgggcagct tatcgacatc
     5641 cacgggcaaa acgaccatca ttcgcttaat caggaagctg cccagcgcga attgttggac
     5701 gcatttgtgg gcggcagggt gcaggcggaa accgtcaggc agctttatca aaactgggcc
     5761 aatgcgaaaa aagccctcca agaggcgcag gaacacgccg atgccgtcat tatcgagcgg
     5821 gagcgtctgg aatggcagtt taacgaactg aatcagttgg acattaaaca aggcgaatgg
     5881 gaagctctca gccaaagcca cgacagcctt gcccattctg ccgaattgtt gcaggccgcc
     5941 gaagaagtcg gaagcaagat tgacggcgac aacggcatcc aacgccatat ctatcaatgt
     6001 caaaaactat tggccaatct gcaaaacatc gagccgcgct ttgccgagag cctgaatatg
     6061 ttggcaagca tcgaggccga attgggcgaa atcagtgcca atatgcgcga tgtggcagga
     6121 cacagtgaca tcaaccccaa tgaattggcg gcacaggaac agcgtatggg cgaactgatg
     6181 gggatggcgc ggaaataccg gattgaaccc gaagagttgc ctgccaagtt ggcagaaatc
     6241 gaagaacgcc tgcaaagtct tcaagctgcc gctgatttgg acgcgctcga gcataatgtt
     6301 gcccacaatt ttgccgaata tcaggaagct gcccacatcc tttctgccat gcgccatcag
     6361 gcggcagggc gtttgagtag cgaaacgacc gagcatatgc aacaccttgc catgaaaggc
     6421 gcgcgtttcg acatcgtcct gttgccttcg tcgccgacgg cacacggttt ggagcaggtt
     6481 caatttcaag ttgccgctaa caaaggcaat ccgccccgcc cgctgaacaa agtcgcctcc
     6541 ggcggcgaat tggcgcgtat cagccttgcc ttacaggttg ttgccagcca atatacccaa
     6601 gttcccaccc tgatttttga tgaggtcgat accggtattg gagggggagt ggctgaaatg
     6661 gtcggcaagg cattacgtgc gttgggcaga aaacatcagg tgcttgccgt tacccatctt
     6721 ccgcaagtcg catcctgcgg agaaaaccac tggcgggtgc gcaagcacag cgagggagag
     6781 caaaccgtca gcgaaatcag tatattggat gaaatacaac ggatcgaaga ggttgcccgt
     6841 atgttgggcg gagaagttat taccgatacg acgcggcaac atgcggcaga attgctgcaa
     6901 cttgcgtcga aaaatagttt attttaaaat caatcagtta caaaaataac tgaaaataga
     6961 agtctaaaat aatagacagg actcagataa atccgtatta tcacgctttc ttaatcactt
     7021 gaaca
//
LOCUS       DAXGCP010000100         6685 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.100, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000100 DAXGCP010000000
VERSION     DAXGCP010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6685
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.100"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..384
                     /locus_tag="ACFJCW_001880"
     CDS             <1..384
                     /locus_tag="ACFJCW_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151951.1"
                     /translation="GQLKPKGNKAEVAIRYDGKFKYDGKATHGPSVKNAVYAHQIETD
                     LYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQYSIFEYEVEHPENPDEKE
                     VTIRAEDCGCIPEEVIIAKELIEIN"
     gene            402..2186
                     /gene="lpdA"
                     /locus_tag="ACFJCW_001881"
     CDS             402..2186
                     /gene="lpdA"
                     /locus_tag="ACFJCW_001881"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HFC4151952.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVIKEVKVKVGDKISEGGLIVVVEAEGAAAAPKAEAAAAPAQEAPKAAA
                     PAPQAAQFGGAADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVG
                     CIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAKS
                     RKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTKLPF
                     IPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG
                     ADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVA
                     AGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHEG
                     HVAAENCAGHKAYFDARVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASGR
                     AIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIHP
                     HPTLGESIGMAAEVALGVCTDLPPQKKK"
     gene            complement(2610..4160)
                     /locus_tag="ACFJCW_001882"
     CDS             complement(2610..4160)
                     /locus_tag="ACFJCW_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HFC4151953.1"
                     /translation="MKKPLISVAAVLLGVALGTPYYLGVKAEESLTQQQKILQKTGFL
                     TVESHQYDRGWFTSTETTVIRLKPELLHNAQKYLPDNLKIVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGETVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGAFIDSEGRFRFDTLVYGDEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGDASGLFTHDPVLNIKIFRFTLPQGKIDVGGKIMFK
                     GMKKEDLNQLGLMLKKTEANIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEARASIAD
                     INETLRLMVDSTVQSMAREKYLTLDGNQIDTVISLKNNALKLNGKTLQNEPDPDFDEG
                     DMVSGQPH"
     gene            complement(4285..6530)
                     /locus_tag="ACFJCW_001883"
                     /pseudo
     CDS             complement(4285..6530)
                     /locus_tag="ACFJCW_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752514.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
BASE COUNT         1620 a         1671 c         1654 g         1740 t
ORIGIN      
        1 ggacagttaa aacctaaagg taataaagct gaagttgcaa ttcgttatga tggtaagttt
       61 aaatatgatg gtaaagctac acatggtcca agtgtgaaga atgcagttta cgcccatcaa
      121 attgaaacag atctatatga cggatgttat atatctacga caacagacaa ggaaattgcc
      181 aagaaatttg caacaagctc cggcatcgaa aatggctata tatatgtttt aaatagagat
      241 ttgtttggtc aatattctat ttttgaatat gaggttgaac atccagaaaa cccagatgag
      301 aaggaagtaa caatcagagc tgaagattgt ggctgtattc ctgaagaagt gattattgct
      361 aaagagttga tagaaattaa ctaagttgaa aggtcaatat aatggcttta gttgaattga
      421 aagtgcccga cattggcgga cacgaaaatg tagatattat cgcggttgaa gtgaacgttg
      481 gcgacaccat cgccgttgac gacaccctga ttaccttgga aaccgacaaa gcgacgatgg
      541 acgtgcctgc cgaagttgcg ggcgtgatca aagaagtgaa agtcaaagtc ggcgacaaaa
      601 tctccgaagg cggtttgatt gtcgtcgtcg aagccgaagg tgcggctgcc gcccctaaag
      661 ccgaagcggc tgccgccccg gcgcaagaag cacccaaagc tgccgctcct gctccgcaag
      721 ccgcgcaatt cggcggtgct gccgatgccg agtacgacgt ggtcgtattg ggcggcggtc
      781 ccggcggtta ctccgctgca tttgccgctg ccgatgaagg cttgaaagtc gccatcgtcg
      841 agcgttacaa aactttgggc ggcgtttgcc tgaacgtcgg ctgtatccct tccaaagcct
      901 tgttgcacaa tgccgccgtt atcgacgaag tgcgccactt ggctgccaac ggtatcaaat
      961 accccgaacc ggaactcgac atcgatatgc ttcgcgccta caaagacggc gtggtttccc
     1021 gcctcacggg tggtttggca ggtatggcga aaagccgtaa agtggacgtt atccaaggcg
     1081 acgggcaatt cttggatcct caccacttgg aagtgtcgct gactgccggc gacgcgtacg
     1141 aacaggcagc ccctaccggc gagaaaaaaa tcgttgcctt caaaaactgt atcattgcag
     1201 caggcagccg cgtaaccaaa ctgcctttca ttcctgaaga tccgcgcatc atcgattcca
     1261 gcggcgcact ggcactgaaa gaagtaccgg gcaaactgct gattatcggc ggcggcatta
     1321 tcggcctcga gatgggtacg gtttacagca cgctgggttc tcgcctggat gtggttgaaa
     1381 tgatggacgg actgatgcaa ggcgcagacc gcgacttggt taaagtatgg caaaaacaaa
     1441 acgaataccg ttttgacaac attatggtca acaccaaaac cgttgcagtc gagccgaaag
     1501 aagacggcgt ttacgttacc tttgaaggtg caaatgcacc taaagagccg caacgttacg
     1561 atgccgtact ggtcgcggca ggccgtgcgc ctaacggcaa actcatcagc gcagaaaaag
     1621 ccggtgttgc cgttaccgat cgtggcttca tcgaagttga caaacaaatg cgcaccaacg
     1681 taccgcacat ctacgctatc ggcgatatcg tcggtcaacc gatgttggca cacaaagccg
     1741 ttcacgaagg ccacgttgcc gctgaaaact gtgccggcca caaagcctac ttcgacgcac
     1801 gcgttattcc cggcgttgcc tacacttccc ccgaagtggc atgggtcggt gaaaccgaat
     1861 tgtctgccaa agcatcaggc cgcaaaatca ccaaagccaa cttcccatgg gcggcttccg
     1921 gtcgtgcgat tgccaacggt tgcgacaacg gctttaccaa gctgattttc gatgccgaaa
     1981 ccggccgcat catcggcggc ggcattgtcg gtccgaacgg tggcgacatg atcggcgaag
     2041 tctgccttgc catcgaaatg ggctgcgacg cggcagacat cggcaaaacc atccacccgc
     2101 acccgacctt gggcgaatcc atcggtatgg ctgcggaagt ggctttgggt gtatgtaccg
     2161 acctgcctcc tcaaaagaaa aaataaacct gatgctctaa gcagccgata aggtttatcc
     2221 gaacaaatgc cgtctgaacc cttcaggcgg catttttatt tggctgtgtt ttaaccatct
     2281 gtcaatttta actggttgca agggaaaaga cgattatttt tcagttaggc agacacctac
     2341 actattgaat accttgaagc taagcatgcc tatcaatact atattaaaat acagcctttt
     2401 atttttcctc catgctttcc aataacagat ttcaactgga tttcaatagt tcccctatcc
     2461 cgtccgaatt ccatatctaa acattggaag cgtgtcctga tatcggatta gagacaatca
     2521 attgtttttg aaacatgaaa atccatccta tttcgagacc gacaaaaatg ccgtctgaac
     2581 atttcagacg gcatttggca taaacggcat taatgcggct ggccggaaac catatctccc
     2641 tcgtcaaaat caggatcggg ttcattttgc agcgttttcc cgtttaactt cagggcgttg
     2701 tttttaaggg aaatgaccgt atcaatctga ttaccgtcta aagtaagata tttttccctt
     2761 gccatacttt ggaccgtact gtccaccatc aggcgcaatg tttcattaat atcggcaatg
     2821 cttgctctgg cttccgcctc atcttcggca tttacactga aaatatttcc agcctgactt
     2881 accgccaaat cttccaacat tttttgagga atactcattc tgatgtttgc ctcggttttc
     2941 tttaacatca gtcccaattg gttcaaatct tccttcttca tgcctttaaa catgattttt
     3001 ccgcccacat caatttttcc ctgaggcagg gtgaaacgga aaattttgat atttagtacc
     3061 gggtcatggg taaataatcc ggaagcatcg cctttgactg ccgcaatcaa atcattgcgg
     3121 atttgttcct cagtcatttt tttggcagaa atttgtgcaa acttgcgttt caatacggtt
     3181 aaggcagaag catcgaggtg ttcggcagcg atatggatgt ccagcgggcc gtatttttca
     3241 tcgccgtaca ccaacgtatc gaaacggaac cgcccttcgc tgtcgataaa cgcgcccgat
     3301 tccccggtct tggttgaaaa agccagcttg ccgacttcga ttttggaagg tgcgatgctg
     3361 ccgttgggat tgataaacgc gccgatctgc aaatcggtaa cgaggttgac cagttcgttc
     3421 aatttgacgt tgtaatcgac accctctttc cattcgagcg aaaatttttc caaagtcaga
     3481 ttgctgctgc ccaaagcaag cggattgatg ccgtctgaag tttccgaatc gaaatgcgct
     3541 ttttcaaacg cggcatcgcc tttgtctgcc agcttgattt tgaacaaggg cgcatcatag
     3601 ctgttgcggt agcttttgaa acctttttga taaaccgttt cccccgtcag gccttcccag
     3661 tgcagcctga tgcccgacag ttcttcataa tcgaaagcgg gaacactgac ttccatttta
     3721 ccgctgccgt tgaaataaac ggtattggca agggaaaccg gagcttgttt cccaaaaaag
     3781 cgttccaaaa ctttttccgt ttcaggcgcg tatttgaact cggtttcaat gtgcgcctgc
     3841 gtgccgaatc cgccggcgaa agggccgtgc gtgatatggt ttaccagcgt aaccggctgt
     3901 tccaacacta ttttcaagtt atccggcagg tatttctgcg cattatgcag caactcgggt
     3961 ttcagacgga tgaccgtcgt ttccgtagag gtaaaccagc ctcgatcata ctggtgcgat
     4021 tcgacggtca aaaagcccgt tttctgcaat attttttgct gctgcgtcag actttcttct
     4081 gctttgacac ccaaataata aggtgtaccc aaagcaacgc cgagcaatac tgccgcaact
     4141 gaaatcaaag gttttttcat cacttcaaac aagcaggttt caaaggtact agaatagcat
     4201 tatttaagca tatcccgcca tatttcttta aaagaaatgc cgtctgaaac ctgttcggac
     4261 ggcattttcg gaaacggagg cagcttagaa atccaattcc gccttcagcc agtaagtacg
     4321 cggcagaccg acgacggcga aactacggtc aaattgtccg cgctgtacct gccagtagtt
     4381 ttttgttgaa caggttttct accgagctgc tgacggtcag ggtgtttttg cccagcttgg
     4441 ttttgtagcg cgcgcctacg tcaaccaagg tataggacgg gaaggcgtat tgtttttgcg
     4501 tgtcttgata agacttgccg aaatacgaaa cattgccgtt caagctcaaa cctttggcaa
     4561 acggtgtatc ccgttcaacg cctgttttga caatcacgcg cgggttggcg acttgtacgc
     4621 cgttaaccag catatcgcgc gcattcggat aattcttcac ggacgattgc agatacatca
     4681 cgccgaaagt cgggcgcagg gttttgttca acaggttggc ataggcattg aactcaatac
     4741 cgcgattgcg ttccatacct tgctcgtcgc cggctgcgcc tcctgctgct ttatatgctg
     4801 caaaatcagt accttttttg gtattgccgc gccagtagcc cgggcgtttg atttggaacg
     4861 cgttcaacgt ggttacaaaa tcgccccagt ttttacgcac gccgatttca aactggcggc
     4921 tgacgcgcgg cttcgccatt gtcgtttcgc cggaatcatc ggttttgata tcggcacgct
     4981 ccaagtcttc catatagttg ccgcacacga ccaaatcagg ttgcggcacc cacgccgcca
     5041 tcagcatcgg gctgaaacgt ttggcatcgc cgctctgtga tttcttctta tcagtgtatt
     5101 caaccgcttg gaaacgtccg cccaaagtca gggggtattt gttatcaacg aagcccaaag
     5161 tatcggacaa agccaagctg ttgactttga tattggcatc caagttggcc gagttcgccc
     5221 aagaattggg atagtcggct ttgaacgatg ccaattgatt cgcaatattt tcgtttgcct
     5281 tcacttctat cttgctgttg ccgttcccgc tgccgtttat ggttttccgc tggcggataa
     5341 cgcggtcgaa agccgtactc cagttatgcg tgaccgggcc ggtttcaaat tcgccgcgtg
     5401 cggtcaggtt catactcaaa gtacggaaat attggtcggt caggcgcgcc gtgccggtgt
     5461 ggtattggtt ggcagccatg caggttttgg tttggctgct cgcaccgctt gtaccgcaaa
     5521 cggttgggga aatcagcgta ccgtaataac gcgctttgtt gtagccgata ccgccggtaa
     5581 tttaggtatt gtcaaacgca tcccattcaa acgtcagcat attggtttcg ccgacggtat
     5641 tttgccagtt ccaagaaggc agcaggttga ttttgccgtc gggcgcgtcg aacaagcgtc
     5701 cgccggcgtt ttggatatcc ttcatacgcg cgcggccgcc gttgattttg cgtttcgcgt
     5761 agatggagtc gaacgtcacg cgcagttttt cgccgcgata atcggcattt aaggcaaatt
     5821 ctttgttgtc ttctctgtaa ccgtggcgcg gggtgtcgcc gtggcgcagt ttgccgttgg
     5881 cacgcacgcc gaatgctttg ttttcgccga agcgttgccc taagtcgaac ctaccttggg
     5941 cgcggttgtt gccgaaccgg gccaaaccga ttttgcggtt gccttcgtcg gcggcttttt
     6001 tggtttcgat gttgacggaa ccggataccg cgccttcagg gtatgccgtt tacggcggtg
     6061 gacgcgcctt taatcagttg tgcgaagccg acttgcacgc tcgccgtgcc ttgcgtgcca
     6121 tacattcctg ccaagccgtt tacgctgaat tggcgcgcat caagctgata accacggaaa
     6181 tacagaccgg tcagcgtgtt gctttcgccg ccaaactctc aaacggaagc gtcttttttg
     6241 gctacggcat ccactaaagt acgcgcctcg gtattgttga aggcttgttc gtcgtagttg
     6301 acgacggtaa tcggcgcggt aaacgcgttg gctttaccca atacgcccaa atttacgcgg
     6361 tcgcgcaagt cgccatcgct ggcgatggag taagaatgcg cggctttgac gcgcttggca
     6421 tcggcgcgga catgaacctg tccgagttcg ccatgctgcg gagtattgtc ggcggcagat
     6481 gaaaacgcgc tcaaaatcaa cagcggcatt aaggcaagtt ttttgttcat gaaaacgctc
     6541 tcttttttaa gtattgggga attaaagata aaacaaacaa acttatcgga tatttcgggc
     6601 ggcaattata tttgataatc acaactatta ccgaaaaact taatcaggcg gagctatccg
     6661 actgttaaat attggtttat ttttg
//
LOCUS       DAXGCP010000101         6653 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.101, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000101 DAXGCP010000000
VERSION     DAXGCP010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6653
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.101"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            120..1339
                     /locus_tag="ACFJCW_001884"
                     /pseudo
     CDS             120..1339
                     /locus_tag="ACFJCW_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
     gene            complement(1399..2205)
                     /locus_tag="ACFJCW_001885"
     CDS             complement(1399..2205)
                     /locus_tag="ACFJCW_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HFC4151954.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVTAEYQ
                     PTFRSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDTT
                     DGKGEVDIIPLRQGFWKASVEYKADFPDQSLCQKQANYTTLTFQIGHSHH"
     gene            2397..2606
                     /locus_tag="ACFJCW_001886"
     CDS             2397..2606
                     /locus_tag="ACFJCW_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HFC4151955.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVIELLARVLGKNPETTVV
                     VIDEVDTDNWDIGGKSVSERRKEGR"
     gene            2695..3909
                     /locus_tag="ACFJCW_001887"
     CDS             2695..3909
                     /locus_tag="ACFJCW_001887"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HFC4151956.1"
                     /translation="MDKFPKSAKLDHVCYDIRGTVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQNKGLRDITVNDVYIGN
                     GVSELIAMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITSKTKAIVVINPNNPTGAVYSKEILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHCHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIRDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYHQ"
     gene            complement(3981..6560)
                     /gene="clpB"
                     /locus_tag="ACFJCW_001888"
     CDS             complement(3981..6560)
                     /gene="clpB"
                     /locus_tag="ACFJCW_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HFC4151957.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADSSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGEILPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDAAGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEIDG
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGADEVAEIVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIKVEADGDRL
                     KFA"
BASE COUNT         1485 a         1659 c         1775 g         1734 t
ORIGIN      
        1 tatagattaa taaaatcggg cttatgtcga ctacatgcta ttacgttttg tcgggaaatt
       61 ggttatagta atgagcgaaa tgcacgcccc tgaaaatctt tttgcgaaaa ggaagcaaaa
      121 tgtctgatgc cgttgcaaaa gaaaccctca atccgtttga aatcgcgcga aaacaggtca
      181 aaaccgcctg cgaccggctg aaaaccgatc cggccgttta tgaaatcctg aagagtccga
      241 cccgcgtgtt ggaagtcaaa ctcgacgacg gcacggtcaa aacctttacc ggttaccgtt
      301 cgcgtgcgtt cccatcccgg tgtgaatctg gacgaagtca aggcactgtc gatttggatg
      361 accatcaaat gctgcgttgc aggcattcct tacggcggcg gcaaaggcgg cgttaccttg
      421 gatccgcgcg attattccga ggcggaactg gaacgcatcg cccgagctta tgccgaagcg
      481 attgccccgc tgatcggcga aaaaaatcga tattcccgcc cccgatgtga acaccaacgg
      541 caaaattatg tcgtggatgg tggatgccta tgaaaacgtg gtgaaacatt ccgcgccggg
      601 cgtatttacc ggcaaaccgg ttgagttcgg cggctctttg gcgcgtaccg aggctaccgg
      661 ttacggcgtg aacctcgccg ccgtccaagc tttggaaaaa ctgggcaaag atgtgaaagg
      721 cgcaacctac gccattcaag gtttcggcaa tgtgggctac cacaccggct attacgcgca
      781 tcaatccggc gcgaaagtcg ttaccgtatc tactgttgac gttgctatct acaatgaaaa
      841 cggcttggat atggaagcgc tgtttaaaga gttccaagaa aaaggcttca tcaccaacaa
      901 agccggttac ggcaaagaaa ttaccaacgc cgaacttttg gctttggata tggacgtact
      961 cgccccttgc gcattggaaa accagctgac ttccgaaaac gccggtaaag tccgcgcgaa
     1021 aatcgtggtt gaaggcgcaa acggcccgac tacgcccgaa gccgacgtta tcctgcgtca
     1081 aaacggcgta ttggtcgtgc ccgatatttt ggcaaactgc ggcggcgtgg tcgtttccta
     1141 tttcgagtgg gtgcaaaacc tgcaaggcta ttattgggag tttgacgaag ttcaggaaaa
     1201 agaaatcgtc gtcctgcgcc gcgcgttccg cgatatttgg aacttggcgc aagagtatga
     1261 tgtcgatttg cgtaccgcgt cttatatgat gagtatccgc cgtgttgaaa aagcgatgaa
     1321 gctgcgcggc tggtattgat gtttgaacaa aggatgccgt ctgaaaccat ttcagacggc
     1381 atttttgttt ggacggaatt aatggtgaga atggccgatt tggaaggtta aagttgtgta
     1441 gttcgcctgt ttttggcaca ggctttgatc ggggaaatcg gctttgtatt cgacactcgc
     1501 tttccaaaag ccttggcgca aggggatgat gtccacttcg cctttgccgt cggtggtgtc
     1561 ggagaaggct tgggcttcgg ttttgtgcgt tttgctgcgg tcgctggtgt cgaagccgtc
     1621 aaatgtagcg gtaacggtgg cattgggcag cggttcgcca cggaacagaa cgcggacttt
     1681 gaagcgttcg cctacgtgaa tgttggcggg attgtccagc gggacgattt ccaagttttg
     1741 tccgaccggt ttggtgatga tggcggtgtc cgcgctttcg tgtcccacgt tgacaatgtt
     1801 tttaccgaac atacgggttt gttcgcaata gcttgcgtca ggcatttctt tgatgccagc
     1861 ctgtttccag cctgctttgt tttttgaccg gaaagtaggc tgatattcgg cggtaacgag
     1921 gtagctgccg tctttgacgg gacggttgct gcggtattgg tagttgtatg tgccgcgttg
     1981 aatcatgttt tccttacctt tttcggtaac cagctgcatc ggtttgctga agatgtgcag
     2041 gcggtctttg gcgatgggtt cgagttcggg gaattcgccg tagcccaagt cggctttaag
     2101 gtattcgccg ccgtgcgtgt gggcggtttc gacccagacg cggtgggcgt gtgcggatgt
     2161 ggcaaatagt gcggaaacgg cgagcagtgt caatgttttc ttcatggtgc agcctttata
     2221 tcgtgcgggt taaaaatttt gttatgctat aacaaaatat gtatcgtgtg aagacggatt
     2281 tgccgcctga aaactgtctt tttgtatcga tttgaatttt tcagaaaatg aagcggacgt
     2341 ttgggcggag gcaacttgtt tgataagata gcaatatttc aaaacggaga aatatcatgc
     2401 cttatgtcaa tattaaagta accggcggca aggaagcacc gactgccgcg caaaaagcgg
     2461 aactgatcgg cggcgtaatc gaattgctgg cacgcgtgct gggtaaaaat cccgaaacaa
     2521 cggttgtcgt gattgacgaa gtggataccg ataactggga tataggcggc aaaagcgtca
     2581 gcgaacggcg caaagagggc aggtaaaaag cctgaaaacc ccgccctgat gctttaaatt
     2641 ccgcgtgaaa aagagtacat tcccacccat tgcccaaaat ttacggaaca cattatggat
     2701 aaatttccca agtctgcaaa gctcgaccac gtctgctacg acatacgcgg gacggttcac
     2761 aaaaaagccc ttcagttgga agaggagggc aacaaaatcc tcaagctcaa tatcggcaac
     2821 cctgcgccgt tcggctttga agcacctgat gaaatcttag tcgatgtcat ccgcaacctg
     2881 ccgacttcgc aaggctattg cgattcgaag gggttgtatt ccgcacgcaa agccattgtt
     2941 cactactatc agaacaaagg tttgcgcgat attacggtaa acgatgtcta tatcggcaac
     3001 ggcgtgtccg agctgattgc gatgtctatg caggcgttgc tcaacgacgg cgacgaaatc
     3061 ctgattcccg cgcccgacta ccctttgtgg acggcggcgg caacgcttgc gggcggtacg
     3121 gtacgccatt atctgtgcga cgaagaaaac ggctggtttc ccaaccttgc cgatatggaa
     3181 gccaaaatca cgtccaaaac caaagccatc gtcgtcatca accccaataa cccgacagga
     3241 gcggtgtaca gcaaggaaat cctgctggaa attgccgaac tggcgcgcaa gcatggtttg
     3301 attattttcg ccgacgagat ttacgacaaa atcctttatg atggcgcggt tcactgccac
     3361 atcgccgcgc tcgcccccga ccttttgacg gtaacgttca acggtttgtc caaagcctac
     3421 cgtgtagccg ggttccgcca aggctggatg gtgctaaacg ggccgaaaca tcacgcaaaa
     3481 ggttatatcg agggtttgga tatgctctcg tccatgcgct tgtgtgccaa tacgccgatg
     3541 cagcacgcga ttcagacggc attgggcggt tatcagagca ttaacgaatt catcttgccc
     3601 ggcggacggc ttttggaaca gcgcaacaga gcgtgggaac tggtcaacca gattcccggc
     3661 gtgtcctgcg tcaaaccgat gggcgcgatg tatatgttcc cgaaaatcga taccgaaatg
     3721 taccgcatcc gcgatgatat gaaattcgtt tacgatttgc tggtgcgcga aaaagtcctg
     3781 ctggtacagg gaacggggtt taattggatc aaacccgacc atttccgcat tgttacgctg
     3841 ccttacgtcc atcagattga agaggcgatg ggcaggttgg caagattcct gcaaacctac
     3901 catcagtagg attctgataa aaaatgccgc ctggaacgga gattcccgtt tcagacggca
     3961 ttttcaacag caggaacaaa tcaggcaaat ttcagtctgt cgccgtcggc ttctactttg
     4021 atttcgcttt cgggcgcata gtttccggca agcagggctt tggccagcgg gttttcgatt
     4081 tccgattgga tcgcgcgttt gagcggacgt gcgccgtaaa tcgggtcgaa accggctttg
     4141 gcgatgatgt ccagagcggc atcggaaaca gtcaggcgca ggttttgttt ttccaaacgt
     4201 ttttccaaac ctttgagctg gattttcgca atactgcgga tattggcctg atccaagcca
     4261 tggaacacga ccacttcgtc gatgcggttg atcatttccg gacggaaatg ttctttcaca
     4321 tcctccatca caacttcttt caccgcttcg tagtcctgcg tgcccatttg ttggatgtgc
     4381 tggctgccga tgttggaagt catcacaatc acggtatttt taaaatctac cgtcctgcct
     4441 tgtccgtcgg tcaaacggcc gtcatccaat acttgcagca ggatgttgaa tacgtcggga
     4501 tgggcttttt ccacttcgtc caaaagaatc acgctgtacg gtttgcggcg gacttgttcg
     4561 gtcaggtagc cgccctcttc gtatccgaca taacccggag gcgcgccgat taagcgggca
     4621 acggcgtgtt tttccatgta ttcggacatg tcgatgcgga tgaggtggtc ttcgctgtcg
     4681 aacaggaagc ctgccaaagc tttgcacaac tcggtcttac ccacaccggt cgggcctaag
     4741 aacaggaagc tgccgtaagg tttgttcgga tcggcaaggc cggagcggct gcggcggatg
     4801 gcatcggaca cggcgcgcac ggcttcgttt tgaccgacta cgcggcggtg caacacttct
     4861 tccattttca acaatttatc gcgttcgcct tccatcattt tggatacggg aatgccggtc
     4921 atacgggaaa cgatttcggc cacttcatcc gcgccgacat tattacgcaa gagtttgttt
     4981 gccggttttg tgctgtccgt atctgcccgt tcggcggctg cacgctgttt ttccaaatgc
     5041 tccaaatctt catacatcaa ttttgaagcc agtgccaaat cgccttgccg ttttgcctgt
     5101 tcgattttaa ttttgacttc gtcaatttgt ttcttaatat tggcagcacc gtctgaaatc
     5161 gctttttcgg ctttccagat ttcgtccaaa tcggcgtatt ctttttgcaa gccgtcgatt
     5221 tcctcgtcta tcagttccaa acgttttttg ctggcatcgt ctttttcttt ttcaacgtgc
     5281 gccttttcca tccgaagctg aatcaaacgg cggtcgattt tgtccatagc ttccggtttg
     5341 gtttcttttt ccatcttgac acggctggca gcttcgtcaa tcaaatcaat cgccttgtcg
     5401 ggcaggaagc ggtcggtaat gtagcggtcg ctcaactccg ctgcggcaac gatagcaggg
     5461 tcggtaatat cgatgccgtg gtggatttcg taacgttcct gcaaaccgcg caggatagcg
     5521 atggtgtctt ccacgctggg ttcgccgacc aatacttttt ggaaacggcg ttcgagtgcc
     5581 gcgtcttttt cgatgtattg gcggtattcg tccaaagtag tcgcaccgat acagtgcagt
     5641 tcgccccgcg ccaaggtcgg tttcaacata ttgcccgcgt ccatcgcgcc gtcggttttg
     5701 cccgcgccga ccaaagtatg gatttcatcg atgaaaatca gggtgttgcc gtcgtctttc
     5761 gccaaatcgt tcaatacgcc tttcaagcgt tcttcaaatt cgccacggta tttcgcaccg
     5821 gcaatcaaag ccgccaaatc caaaaccagc aggcgtttgt tacgcaggga ttcaggtact
     5881 tcgccgttga cgatgcgttg cgccaaacct tcgacgatgg cggttttacc cacaccgggt
     5941 tcgccaatca gcacggggtt gtttttggtg cggcgttgca gcacctgaat cgcgcggcgg
     6001 atttcatcat cacgaccgat aacggggtcg agcttaccgt ctcgggcgcg ttgggtcaga
     6061 tcgagcgtgt attttttcaa agcatcgcgt tggtcttcgg cattcgcatc gttcacgttt
     6121 tgtccgcctc gtaccgcatc gatcgcggca ttgatatttt gttcggtcgc accggcttct
     6181 ttcaagattt tgccggccgc atcgttctgc tgcaccaagg cgagcaggaa aagttcgctg
     6241 gcgatatagg catcgccgcg tttggttgcc gctttgtcca tcaggttcaa caccgcctgc
     6301 aattcgcggc tgggcagaat ctcaccacct tgtccggaca ctttcggcag gctgttcaaa
     6361 tgctgctgca aacgctgttt aacctgcggc acgttcacgc ccgcatgagc caagagcgcg
     6421 gcagctccgc tgttttggtc gtcaagcagg gctttcagta cgaaacctgc ttccagatag
     6481 ctgctgtccg cagccaacgc caaactctga gcttctgcaa gggcttgttg gaatttggcg
     6541 gttaatttgt cgtatcgcat tttcgtttcc ttttcaaaat gtccgctgtc gaagcctata
     6601 tgtgcatgac tgtggataac tcaagtgttg ttttctgttt ttctatattt aat
//
LOCUS       DAXGCP010000102         6526 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.102, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000102 DAXGCP010000000
VERSION     DAXGCP010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6526
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.102"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..662
                     /locus_tag="ACFJCW_001889"
     CDS             <1..662
                     /locus_tag="ACFJCW_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC4151958.1"
                     /translation="LSEEKDGNRLARHHKHGKIWKKPTRHEDIAAFFPFGNPIHNNTM
                     IMRRSVIDGGLRYDTGRDWAEDYQFWYDVSKLGRLAYYPEALVKYRLHANQVSSKHSV
                     RQHEIAQGIQKTARNDFLQSMGFKTRFDSLEYRQTKAAAYELPEKDLPEEDFERARRF
                     LYRCFKRTDTPPSGAWLDFAADGRMRRLFTLRQYFGILYRLIKNRRQARSDSAGKEQE
                     I"
     gene            662..1501
                     /locus_tag="ACFJCW_001890"
     CDS             662..1501
                     /locus_tag="ACFJCW_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC4151959.1"
                     /translation="MQNHVISLASAAERRAHIADTFGSRGIPFQFFDALMPSERLEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWEQALDEGLPYIAVFEDDVLLGEGAEQFLA
                     EDTWLQERFDPDSAFVVRLETMFMHVLTSPSGVADYGGRAFPLLESEHCGTAGYIISR
                     KAMRFFLDRFAVLPPERLHPVDLMMFGNPDDREGMPVCQLNPALCAQELHYAKFHDQN
                     SALGSLIEHDRRLNRKQQRRDSPANTFKHRLIRALTKIGREREKRRKRREQTIGKIIV
                     PFQ"
     gene            1513..2434
                     /locus_tag="ACFJCW_001891"
                     /pseudo
     CDS             1513..2434
                     /locus_tag="ACFJCW_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361211.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
     gene            2494..3507
                     /locus_tag="ACFJCW_001892"
     CDS             2494..3507
                     /locus_tag="ACFJCW_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HFC4151960.1"
                     /translation="MQPLVSVLICAYNVEKYFAQSLSAVVGQTWRNLDILIVDDGSTD
                     GTPAIARHFQEQDGRIRIISNPRNLGFIASLNIGLDELAKSGGGEYIARTDADDIASP
                     GWIEKIVGEMEKDRSIIAMGAWLEVLSEENNKSVLAAIARNGAIWDKPTRHEDIVAVF
                     PFGNPIHNNTMIMRRSVIDGGLRFDPAYIHAEDYKFWYEAGKLGRLAYYPEALVKYRF
                     HQDQTSSKYNLQQRRTAWKIKEEIRAGYWKAAGIAVGADCLNYGLLKSTAYALYEKAL
                     SGQDIGCLRLFLYEYFLSLEKYSLTDLLDFLTDRVMRKLFAAPQYRKILKKMLRPWKY
                     RSY"
     gene            3526..4368
                     /locus_tag="ACFJCW_001893"
     CDS             3526..4368
                     /locus_tag="ACFJCW_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HFC4151961.1"
                     /translation="MQNHVISLASAAERRAHIADTFGSRGIPFQFFDALMPSERLERA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLFGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHCGTAGYIISR
                     EAMRFFLDRFAVLPAERIKAVDLMMFTYFFDKEGMPVYQVSPALCTQELHYAKFLSQN
                     SMLGSDLEKDREQGRRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKVYGRRV
                     ILFK"
     gene            complement(4922..5647)
                     /locus_tag="ACFJCW_001894"
     CDS             complement(4922..5647)
                     /locus_tag="ACFJCW_001894"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HFC4151962.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHTARLTVLEKHRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTRLIMSINRACKLGDIRHPSGAIVFMVGPEGGWTEQEEQQAFEAGFQAVTLGKR
                     ILRTETAPLAAIAAMQTLWGDFT"
     gene            5751..>6526
                     /locus_tag="ACFJCW_001895"
     CDS             5751..>6526
                     /locus_tag="ACFJCW_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HFC4151963.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSRRKEDGSMLSEADIAAQT
                     AFAAALPLLIDCPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVG"
BASE COUNT         1512 a         1566 c         1906 g         1542 t
ORIGIN      
        1 ttttgtcgga agaaaaggac ggcaaccggc tggcgcggca tcacaaacac ggcaaaattt
       61 ggaaaaagcc gacccggcac gaagacatcg ccgccttttt ccctttcggc aaccccatac
      121 acaacaacac gatgattatg cggcgcagcg tcattgacgg cggtttgcgt tacgacaccg
      181 ggcgggattg ggcggaagat taccaatttt ggtacgatgt cagcaaattg ggcaggctgg
      241 cttattatcc cgaagccttg gtcaaatacc gccttcacgc caatcaggtt tcatccaaac
      301 acagcgtccg ccaacacgaa atcgcgcaag gcatccaaaa aaccgccaga aacgattttt
      361 tgcagtctat gggttttaaa acccggttcg acagcctaga ataccgccaa acaaaagcag
      421 cggcgtacga attgccggag aaggatttgc cggaagaaga ttttgaacgc gcccgccggt
      481 ttttgtaccg atgcttcaaa cggacggaca cgccgccctc cggcgcgtgg ctggatttcg
      541 cggcagacgg caggatgagg cggctgttta ccttgaggca atacttcggc attttgtacc
      601 ggctgattaa aaaccgccgg caggcgcggt cggattcggc agggaaagaa caggagattt
      661 aatgcaaaac cacgttatca gcttggcttc cgccgcagag cgcagggcgc acattgccga
      721 taccttcggc agtcgcggca tcccgttcca gtttttcgac gcactgatgc cgtctgaaag
      781 gctggaacag gcgatggcgg aactcgtccc cggcttgtcg gcgcaccctt atttgagcgg
      841 agtggaaaaa gcctgcttta tgagccacgc cgtattgtgg gaacaggcgt tggacgaagg
      901 cttaccgtat atcgccgtat ttgaagatga tgtcttactc ggcgaaggcg cggagcagtt
      961 ccttgccgaa gatacttggc tgcaagaacg ctttgacccc gattccgcct ttgtcgtccg
     1021 cttggaaacg atgtttatgc acgtcctgac ctcgccctcc ggcgtggcgg actacggcgg
     1081 gcgcgccttt ccgcttttgg aaagcgaaca ctgcgggacg gctggctata ttatttcccg
     1141 aaaggcgatg cgttttttct tggacaggtt tgccgttttg ccgcccgaac gcctgcaccc
     1201 tgtcgatttg atgatgttcg gcaaccctga cgacagggaa ggaatgccgg tttgccagct
     1261 caatcccgcc ttgtgcgccc aagagctgca ttatgccaag tttcacgacc aaaacagcgc
     1321 attgggcagc ctgatcgaac atgaccgccg cctgaaccgc aaacagcaaa ggcgcgattc
     1381 ccccgccaac acattcaaac accgcctgat ccgcgccttg accaaaatcg gcagggaaag
     1441 ggaaaaacgc cggaaaaggc gcgaacagac aatcggcaag attattgtgc ctttccaata
     1501 aaaggagaaa agatggacat cgtatttgcg gcagacgaca actatgccgc ctacctttgc
     1561 gttgcggcaa aaagcgtgga agcggcccat cccgatacgg aaatcaggtt ccacgtcctc
     1621 gatgccggca tcagtgagga aaaccgggcg gcggttgccg ccaatttgcg gggggggggg
     1681 taatatccgc tttatagacg taaaccccga agatttcgcc ggcttcccct taaacatcag
     1741 gcacatttcc attacgactt atgcccgcct gaaattgggc gaatacattg ccgattgcga
     1801 caaagtcctg tatctggata cggacgtatt ggtcagggac ggcctgaagc ccttatggga
     1861 taccgatttg ggcggtaact gggtcggcgc gtgcatcgat ttgtttgtcg aaaggcagga
     1921 aggatacaaa caaaaaatcg gtatggcgga cggagaatat tatttcaatg ccggcgtatt
     1981 gctgatcaac ctgaaaaagt ggcggcggca cgatattttc aaaatgtcct gcgaatgggt
     2041 ggaacaatac aaggacgtga tgcaatatca ggatcaggac attttgaacg ggctgtttaa
     2101 aggcggggtg tgttatgcga acagccgttt caactttatg ccgaccaatt atgcctttat
     2161 ggcgaacggg tttgcgtccc gccataccga cccgctttac ctcgaccgta ccaatacggc
     2221 gatgcccgtc gccgtcagcc attattgcgg ctcggcaaag ccgtggcaca gggactgcac
     2281 cgtttggggt gcggaacgtt tcacagagtt ggccggcagc ctgacgaccg ttcccgaaga
     2341 atggcgcggc aaacttgccg tcccgccgac aaagcatatg cttcaaagat ggcgcaaaaa
     2401 gctgtctgcc agattcttac gcaagattta ttgacggggc aggccgtctg aagccttcag
     2461 acggcatcgg acgtatcgga aaggagaaac ggattgcagc ctttagtcag cgtattgatt
     2521 tgcgcctaca acgtagaaaa atattttgcc caatcgctgt ccgccgtagt ggggcagact
     2581 tggcgcaact tggatatttt gattgtcgat gacggttcga cggacggcac gcccgccatt
     2641 gcccggcatt tccaagaaca ggacggcagg atcaggataa tttccaatcc ccgcaatttg
     2701 ggctttatcg cctctttaaa catcgggctg gacgaattgg caaagtcggg ggggggggaa
     2761 tatattgcgc gcaccgatgc cgacgatatt gcctcccccg gctggattga gaaaatcgtg
     2821 ggcgagatgg aaaaagaccg cagcatcatt gcgatgggcg cgtggttgga agttttgtcg
     2881 gaagaaaaca ataaaagcgt gcttgccgcc attgcccgaa acggcgcaat ttgggacaaa
     2941 ccgacccggc atgaagacat tgtcgccgtt ttccctttcg gcaaccccat acacaacaac
     3001 acgatgatta tgaggcgcag cgtcattgac ggcggtttgc ggttcgatcc agcctatatc
     3061 cacgccgaag actataagtt ttggtacgaa gccggcaaac tgggcaggct ggcttattat
     3121 cccgaagcct tggtcaaata ccgcttccat caagaccaga cttcttccaa atacaacctg
     3181 caacagcgca ggacggcgtg gaaaatcaaa gaagaaatca gggcggggta ttggaaggcg
     3241 gcaggcatag ccgtcggggc ggactgcctg aattacgggc ttttgaaatc aacggcatat
     3301 gcgttgtacg aaaaagcctt gtccggacag gatatcggat gcctccgcct gttcctgtac
     3361 gaatatttct tgtcgttgga aaagtattct ttgaccgatt tgctggattt cttgacagac
     3421 cgcgtgatga ggaagctgtt tgccgcaccg caatatagga aaatcctgaa aaaaatgtta
     3481 cgcccttgga aataccgcag ctattgaaac cgaacaggat aaatcatgca aaaccacgtt
     3541 atcagcttgg cttccgccgc agagcgcagg gcgcacattg ccgatacctt cggcagtcgc
     3601 ggcatcccgt tccagttttt cgacgcactg atgccgtctg aaaggctgga acgggcgatg
     3661 gcggaactcg tccccggctt gtcggcgcac ccttatttga gcggagtgga aaaagcctgc
     3721 tttatgagcc acgccgtatt gtggaaacag gcattggacg aaggcttacc gtatgttgcc
     3781 gtatttgagg atgatgtcct gtttggcaaa gacgcagaaa agttccttgc cgaagatact
     3841 tggttggaag agcgttttga taaggattcc gcctttatcg tccgtttgga aacgatgttt
     3901 gcgaaagtta ttgtcagacc ggataaagtc ctgaattatg aaaaccggtc atttcctttg
     3961 ctggagagcg aacattgtgg gacggctggc tatatcattt cgcgtgaggc gatgcggttt
     4021 ttcttggaca ggtttgccgt tttgccggca gagcggatta aagcggtaga tttgatgatg
     4081 tttacttatt tctttgataa ggaggggatg cctgtttatc aggttagtcc cgccttatgt
     4141 acccaagaat tgcattatgc caagtttctc agtcaaaaca gtatgttggg tagcgatttg
     4201 gaaaaagata gggaacaagg aagaagacac cgccgttcgt tgaaggtgat gtttgacttg
     4261 aagcgtgctt tgggtaaatt cggtagggaa aagaagaaaa gaatggagcg tcaaaggcag
     4321 gcggagcttg agaaagttta cggcaggcgg gtcatattgt tcaaatagtt tgtgtaaaat
     4381 ataggggatt aaaatcagaa atggacacac tgtcattccc gcgcaggcgg gaatctaggt
     4441 ctttaaactt cggttttttc cgataaattc ttgccgcatt aaaattccag attcccgctt
     4501 tcgcggggat gacggcgggg ggatttctgt ttttccgaca aattcctaaa acttaaaatt
     4561 ccgttattcc cgcgaaaaca gaaaaccaaa aacagaaacc tgaaaacaga aacctaaaat
     4621 tcgtcattcc cgcgcaggcg ggaatccagt ccgttcggtt tcgcttgttt taagtttcgg
     4681 gtaacttcca cttcgtcatt cccgcgaaag tgggaatccg gttcgttgag tttcagtcat
     4741 ttccgataaa tcaccgcaac gttaaatttc tagattcccg cctgcgcggg aatgacggcg
     4801 gagagggttt gttgtttcgg gtaaatccct gtagtttttc gtttccagat tcccgctttc
     4861 gcggggatga cggcgggggg attgttgctt tttcggataa aatcccgtgt tttttcatct
     4921 gctaggtaaa atcgccccaa agcgtctgca tcgcggcgat ggcggcgagt ggggcggttt
     4981 ctgtgcgtaa aatccgtttt ccgagtgtaa ccgcctgaaa gccggcttca aatgcctgtt
     5041 gttcttcctg ttctgtccag ccgccttcgg gcccgaccat aaagacgatt gcgccggacg
     5101 ggtggcggat gtcgccgagt ttgcaggcgc ggttgatgct cataatcagc ctggtgcttt
     5161 cagacggcat tttgtcgagt gcttcacggt agccgatgat gggcagtacg gggggaacgg
     5221 tgttcctgcc gctttgttcg cacgcggaga tgacgatttc ctgccagcgt gcgaggcgtt
     5281 tggcggcgcg ttctccgtcg aggcggacga tgcagcgttc gctgatgacg ggctgtatgg
     5341 cggttacgcc gagttcgacg cttttttgca gggtgaaatc catgcgatcg ccggaggaaa
     5401 tggattggat gagcgtgatg ttgagcgggg actcgttgtc ggttgtgtct tcgtgcagga
     5461 tttcggcttc ggcgcggtgt ttttccaaaa cggtcagccg tgcggtatgt gccttgcctt
     5521 tgccgtcgaa gagggtgatg ttttcgttgg ggcggacgcg caggacgttg aggtggcgga
     5581 cgatgttgtc gggcagggcg acggtttgtc cgacggaaag gttttcgggc aggtagaatc
     5641 tgggcatagt ttttggcggt tcggacggtt ataatccgtc gcagcggcgt gatggaaacg
     5701 gacattatac gttcgcgcgc cgcaagttca aaatatgagg acagtaggaa gtgttacacc
     5761 gtttgcagaa agtcgtgcgc catatcgcgc aaaccgaaat tatgccgcgt tttttgaata
     5821 cgccgtcccg ccgcaaggaa gacggttcga tgttgagcga ggcggacatt gccgcgcaga
     5881 cggcttttgc cgccgcgttg ccgcttctga tcgattgccc gatgttgggc gaggaaatgt
     5941 cgcggcagga acagtcggct ttgtgggaac aatattcggg ggaaaagggg ctgtggattg
     6001 tcgatccgat agacgggacg aacaattttg tcaacgggct gccgcatttt gccgtgtcgg
     6061 tggcgtttgt ccgcaacggg cgcgccgaat tgggcgtaat ctacaatccg gtcagcggcg
     6121 aatgttttta tgccgaacgc gggcagggtg cgtttcttaa tgggacacgc ctgcctttgc
     6181 gtctcgtgga taaaaaactc aatgaggcga ttgcgggcgt ggaaatcaaa tatctgcgtt
     6241 cgggcaaact ttccagccgc atgagtacgc tcgcgccttt cgggacgata cgcagtatgg
     6301 gcagcagcac gctggactgg tgttatctgg cgtgcgggcg ttatgatgtt tatgtccacg
     6361 gcgggcagaa gctgtgggat tatgctgcgg gtgcgttgat tttcgaggag gcgggcggca
     6421 ggctgacgac tttggaaggc gacgggtttt ggagtggtga acacgtgttc aaacgctcgg
     6481 tcgtcgccgc gctcgaaccg aagctgtttg aacgctgggt cgggtg
//
LOCUS       DAXGCP010000103         6338 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.103, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000103 DAXGCP010000000
VERSION     DAXGCP010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6338
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.103"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(89..1327)
                     /locus_tag="ACFJCW_001896"
                     /pseudo
     CDS             complement(89..1327)
                     /locus_tag="ACFJCW_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680490.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
     gene            complement(1507..2880)
                     /locus_tag="ACFJCW_001897"
     CDS             complement(1507..2880)
                     /locus_tag="ACFJCW_001897"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HFC4151964.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQGY
                     IKNLPLRHTVLFGGVNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKAEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPRQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTFQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYI
                     HRIGRTGRAGADGVAISLMDESEQKMFEAIKELTGNKLLIERIEGFEPRWWEQEGSKP
                     EKTETSEPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRRGHRTCALL
                     QPRYGVK"
     gene            3094..4098
                     /gene="dusB"
                     /locus_tag="ACFJCW_001898"
     CDS             3094..4098
                     /gene="dusB"
                     /locus_tag="ACFJCW_001898"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HFC4151965.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRAFGAGWAVCEMLAS
                     DPTLRNTGKTLHRSDFADEGGIVAVQIAGSDPEQMADAARYNVGLGAQVIDINMGCPA
                     KKVCNVQAGSALMQDEPLVAAILEAVVKAAGVPVTLKTRLGWHDDHQNLPAIAKIAED
                     CGIAALAVHGRARTQMYKGEARYELIAETKSRLNIPVWVNGDITSPQKAAAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECRAAILNHIRAMHAFYGETVGV
                     RIARKHIGWYIGEMPDGEQARREINRLDNAAAQYDTLAGYLERLAGKTDRWACGYREG
                     "
     gene            4111..4260
                     /locus_tag="ACFJCW_001899"
     CDS             4111..4260
                     /locus_tag="ACFJCW_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151966.1"
                     /translation="MPPFGFGRHLSAWFGGRAESRPANVENNKCRLKTSGTGFAKRLS
                     DGIPS"
     gene            4287..4526
                     /locus_tag="ACFJCW_001900"
     CDS             4287..4526
                     /locus_tag="ACFJCW_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HFC4151967.1"
                     /translation="MNPATADIAQCIEQNLNQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            4529..5065
                     /gene="ruvC"
                     /locus_tag="ACFJCW_001901"
     CDS             4529..5065
                     /gene="ruvC"
                     /locus_tag="ACFJCW_001901"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HFC4151968.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADEP
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            5116..5985
                     /locus_tag="ACFJCW_001902"
     CDS             5116..5985
                     /locus_tag="ACFJCW_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HFC4151969.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKIAGLIGSLAYLLVKPRRRIGEIN
                     LAKCFPEWDEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAKCLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDEQILKGRNRYHNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNNSVFVDFFGIQTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPSEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
BASE COUNT         1380 a         1630 c         1870 g         1458 t
ORIGIN      
        1 attttaattg actatatttg tgtgaatgat gaaataaaaa tgccgtctga acccgattgg
       61 attcagacgg cattttgtat ggcaggattt attcgctttc caactgaccg acccattctg
      121 acaaggcagt caggcgttgt tcggatttcg ccacgaacgg gttttcggta tcccacgcgt
      181 agcctgccaa aatcgaagaa agcatacggc tgatttccgg gctgcggtcg ggcgcgtaca
      241 cgacgttttg gaagcggaaa tcataccagc cgtccacata ggtgcggaac gcgtctacgc
      301 cgatcatcag gggttcggca aattcggttt gccaatcggc ggcttcgcct ttgagttgtt
      361 ttgtcagcag atcggcagca agttcggcgg agtgcagcgc gatggttacg cccgacgaga
      421 acacggggtc gaggaactcg gcggcattgc ccaacagcgc gaaatgcctg ccgtgcagtg
      481 atttgacgtt ggcggaatag ccttggatgg agcggaacgg aaaatcgttt tcccaaacgg
      541 ctttgtccaa aatttcgctc aacatcgggc attcgtaaac aaattttttc aacaccgttt
      601 ccgattcgcc ggcaagtttg tcgggtgtgc cgaccacgcc gacggaacag cggttgtcgc
      661 cgaagggaat cagccaaatc cacacgtcgc ggttgttgcg gatgggtggt aatcaggatt
      721 ttgttgcggt cgaatttcgg gtgggtaatg ttgtcgtcga tgtgcgtgaa atgcgtttgg
      781 cgcggcggca ggtgcgaggg cgtttccaag tttagcaggc gcggcagcac gcgtccgtag
      841 ccgcttgcgt ccaagacgaa tttcgcggtc agttcatagc tctcgccggt gtcggtttcg
      901 atgttcaagc gggcaaaatc gccgctgttg tcgaacgcgg ttacgccgtg cccgaaacgt
      961 acttcaacgc cttgtttggc ggcttcttca atcaggattt tgtcgaacac ggcgcggcgg
     1021 acttggtaaa ccgtgccggg gccgtctgaa aatttatcgg tgaaatcaaa ctcggtatag
     1081 cggctgcccc acgaaaacgc cgcaccgttt ttcaactgaa agccgggccc ggtgcgaacg
     1141 gcatcggcaa aaccggcttc ttccagcatt tccatacagt gcggcagcag gctttcgccg
     1201 atgacgaagc gcggaaagtg ctgttttcca acacgcagac ttgataacct tttttgcgga
     1261 gcagggcgga tgcggccgaa cctgccggac ctgcgccgat tacggcgaca tcgaattggg
     1321 tggacattgg gaaatcctga tggtttgagt ggaaaaggaa atgatattgt acaggcagca
     1381 aatgccgtct gaaactgttt gcggaagaaa tttatccggt gcgggcggtt gctcccaatg
     1441 cgccagtccg gtttgaaaaa tgccgtctga aacgggaaat gttcagacgg catttgattt
     1501 tcagggttat tttacgccgt aacgcggttg gagcagggcg cacgtccggt gtccccggcg
     1561 gcttcggcgg ctgcgcccgg caatttttcc gcaggccgcg cccgcatcgt ttgccgtggt
     1621 ttccggccgg gtattttttt cgcgctgagc cctggcggat tcgtagcggt tgcgttgtct
     1681 cggttcgctt gtttcggttt tttccggttt tgagccttcc tgttcccacc atcggggctc
     1741 gaagccttcg atgcgttcga tgagcagctt gttgccggtc agttctttga tggcctcaaa
     1801 cattttctgt tcggattcgt ccatcaggga aatcgccacg ccgtccgcac cggcgcgccc
     1861 cgtgcgtccg atgcggtgga tgtagtcttc gggctgggcg ggcatttcgt aattgatgac
     1921 gaagggcagt tcggcgatgt ccagcccacg cgcggcgata tcggtggcga cgaggacgcg
     1981 caggctgccg tctttgaagg cgttgagtgt ttcgagcctg ctttgttggg aacggtcgcc
     2041 gtgtatcgcc tgtgcggaca ggttgcggcg caccagttcg cgcgttacgc ggtcgacgct
     2101 ttgtttggtt ttgcaaaaga cgataacttg gttcatatgc agatcgacaa tcagccgttc
     2161 gagcaggttg cgcttttgga aggtatcgac ggcgatgatg tgttgttcga cgttggcgtt
     2221 ggtggtgttt tgggcggcaa cctcgacggt ttcgggcgcg ttcatgaagt cttgcgccag
     2281 tttgcgtatc ggtgcggaga aggtggcgga aaagagcagg gtttggcgtt ggcggggcag
     2341 catctgcatg attttgcgga tgtcgtcgat aaaccccata tccaacatgc ggtctgcttc
     2401 gtccagaacg acgatttcgg ctttgtttaa actgatgttt ttctgtttca catggtcgag
     2461 cagccgtccg acggtggcga cgactatttc gcagccggca cgcaggtcgg cggtttgttt
     2521 gtccatgttg acaccgccga agaggacggt atgccgcagc ggcaggtttt taatgtagcc
     2581 ctgcacgttt tggtcgattt ggtcggcaag ttcgcgcgtc ggggtcaaca cgagcatacg
     2641 cacggggtgc attgcaggcg aggtgctggc ggtggcgtaa cgtttgaggc gttccagact
     2701 gggcagcata aaggcagcgg ttttgcctgt gccggtttgc gcggcggcaa gcaggtcgtg
     2761 tccggccagt gctttgggaa tggccgcggc ttggatgggc gtcgggtttt cgtaaccttg
     2821 cgcggtcagt gcggaaacca gttccgtacc caaacctaaa gaggaaaatg gattactcat
     2881 gattgtagtc tttctttcag accttatgcc gtctgaagcg ggaaaccgat aggacgggga
     2941 aataaactgc ccgcctgtga acggcgggga cgggaatttg tgtgcggatt atgccataaa
     3001 acggtgcccg ccccaatcgc gggcgcgtcc gcagattgga aatcctgctt aaaaaatgta
     3061 caatggcgca cttttttgaa acgcgggccc attatgcaca tcggcggtta ttttatcgac
     3121 aaccccatcg cacttgcgcc gatggcgggc attaccgaca aacccttccg ccgcctctgt
     3181 cgggcgtttg gcgcaggttg ggcggtgtgc gaaatgctgg ccagcgatcc gacgctcagg
     3241 aataccggaa aaaccctgca ccgcagtgat tttgccgatg aaggcggcat cgttgccgtg
     3301 cagattgccg gcagcgaccc cgaacagatg gcggatgcgg cgcgttacaa cgtcggactc
     3361 ggggcgcagg tcatcgacat caatatgggc tgccccgcca agaaagtgtg caacgtccaa
     3421 gccggtagcg cgctgatgca ggacgagccg ctggttgccg ccattttgga ggcggtggtc
     3481 aaggcggcgg gcgtacccgt taccctcaaa acccgtttgg gttggcacga cgaccatcaa
     3541 aacctgcccg ccatcgccaa aatcgccgaa gattgcggca ttgccgccct tgccgtccac
     3601 gggcgcgcgc gcacgcaaat gtacaaaggc gaggcgcgtt acgaactcat cgccgagacc
     3661 aaaagccgtc tgaacatccc ggtctgggtc aacggcgaca tcacttcgcc gcaaaaagcc
     3721 gccgccgtcc tcaaacaaac cgccgccgac ggcatcatga tagggcgcgg cgcgcaaggc
     3781 aggccgtggt ttttccgcga tttgaagcat tatgccgaac acggcgtttt accgcctgcc
     3841 ttgagtttgg cagaatgcag agccgccatt ttgaaccaca tccgcgccat gcacgcgttt
     3901 tatggtgaga ccgtcggtgt gcgcatcgca cgcaaacaca taggctggta catcggcgaa
     3961 atgcccgacg gcgaacaggc gcggcgtgaa atcaaccgct tggacaatgc ggcggcgcaa
     4021 tacgacacac ttgccggtta tcttgaaagg cttgccggaa aaaccgaccg ttgggcgtgc
     4081 ggctatcggg aagggtaggg cagtattgcc atgccgccgt tcgggttcgg acggcatctg
     4141 tctgcatggt tcggaggtcg ggcggaatcc cggccggcga atgtcgaaaa caataaatgc
     4201 cgtctgaaaa cgagtggaac gggtttcgcc aaaaggcttt cagacggcat tccgtcttaa
     4261 aaacatttca atcaaaagga tatgcgatga accctgcgac tgcggacatt gcgcaatgta
     4321 tcgagcagaa cttgaaccaa tatttcaaag acctgaacgg caccgaacct tgcggcgtgt
     4381 acgatatggt actgcatcag gtggaaaagc cgctgctggt gtgcgtgatg gagcaatgcg
     4441 gcggcaacca gtccaaagcc tccgtgatgc tgggactgaa ccgcaatacc ttgcgtaaga
     4501 aactgattca acacggtttg ctgtgaatat gtcggcaacc gtccgtatct tgggcatcga
     4561 cccgggcagc cgcgtaacgg gtttcggcat catcgatgtc agggggcgcg atcattttta
     4621 cgtcgcctcc ggctgcatca aaacgcctgc cgatgagcct ctggcagaca ggattgccgt
     4681 gattgtgcgg catatcggcg aagtcgttgc cgtttacaag ccgcaacagg cggcggtgga
     4741 acaggtgttc gtcaacgtca atccggcatc gacgctgatg ctcggtcagg cgcgcggagc
     4801 ggcattggcg gctttggtca gccataagct gcccgtttcg gaatacaccg ccttgcaggt
     4861 caaacaggcg gtggtcggca aaggcaaggc ggcgaaagaa caggtgcagc atatggtggt
     4921 gcaaatgctg ggactttcgg gaacgccgca ggcggatgcg gcggacggtc ttgccgtcgc
     4981 gctgacccac gccttacgca accacgggct tgccgccaaa ctcaatcctt cggggatgca
     5041 ggtcaagcgc ggaaggtttc aatagtttca gacggcattt gtattttgcc gcctgaaaag
     5101 aaaatgtgta ccgagatgaa atttatattt tttgtactgt atgttttgca gtttctgccg
     5161 tttgcgctgc tgcacaagat tgccggcctg atcggttcgc ttgcctacct tctggtcaaa
     5221 ccgcgccgcc gtatcggcga aatcaatttg gcaaaatgtt ttcccgaatg ggacgaagaa
     5281 aagcgtaaaa ccgtgttgaa acagcatttc aaacacatgg caaaactgat gctcgaatac
     5341 ggcttatatt ggtacgcgcc tgccaaatgc ctgaaatcgc tggtgcgcta ccgcaataag
     5401 cattatttgg acgacgcgct ggcggcgggg gaaaaagtca tcatcctgta cccgcacttt
     5461 accgcgttcg agatggcggt gtacgcgctt aatcaggatg tcccgctgat cagtatgtat
     5521 tcccaccaaa aaaacaagat attggacgaa cagattttga aaggccgcaa ccgctatcac
     5581 aacgtcttcc ttatcgggcg caccgaaggg ctgcgcgccc tcgtcaaaca gttccgcaaa
     5641 agcagtgcgc cgttcctgta tctgcccgat caggatttcg gacgcaacaa ttcggttttt
     5701 gtggattttt tcggcattca gacggcaacg attaccggct tgagccgcat tgccgcgctt
     5761 gcaaatgcaa aagtgatacc cgccattccc gtccgcgagg cggacaatac ggttacattg
     5821 caattctatc ccgcttggaa atcctttccg agtgaagacg cgcaagccga cgcgcaacgt
     5881 atgaaccgct ttatcgaaga acgcgtgcgc gaacacccgg aacaatattt ctggctgcac
     5941 aagcgtttca aaacccgtcc ggaaggcagc cccgattttt actgactaca taaaattaca
     6001 aaacaaatca ggcgtttcag atcaaaaacc ccgattgttt ttgggaattt gaaacccggg
     6061 ttgtacaaac aggatttgcc ggacggtttt aacggttcag ttgtttgtaa aaacaatgct
     6121 tttttaaaat tgacaaaaaa cgaaatcggt tttaaaggct tattccgaga acaaagggga
     6181 gtggatgccg aaaacccggt taatatatta tagtggatta acaaaaacca atacggcgtt
     6241 gcttcgcctt agctcaaaga gaacgattcc ctaaggtgct gaagcaccaa gcgaatcggt
     6301 tccgtactat ttgtactgcc tgcggcttcg ccgccttg
//
LOCUS       DAXGCP010000104         6276 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.105, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000104 DAXGCP010000000
VERSION     DAXGCP010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6276
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.105"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            190..1248
                     /gene="alr"
                     /locus_tag="ACFJCW_001903"
     CDS             190..1248
                     /gene="alr"
                     /locus_tag="ACFJCW_001903"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HFC4151970.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGMTEIQMEAFDLGTKGLEGEESLANSAAILNIPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRISMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(1790..3145)
                     /locus_tag="ACFJCW_001904"
     CDS             complement(1790..3145)
                     /locus_tag="ACFJCW_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HFC4151971.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISTDIDVLNQ
                     NIYNKITTVGKDLVATAKHLSAKYGVPIVNQRISVTPIAQIAAATKADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSVPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETIKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDAVSLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPAKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(3160..3432)
                     /locus_tag="ACFJCW_001905"
     CDS             complement(3160..3432)
                     /locus_tag="ACFJCW_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HFC4151972.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENRINILNISQQLMDDFFT
                     MIILVDTSKCPKSRQEILDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(3557..4294)
                     /locus_tag="ACFJCW_001906"
     CDS             complement(3557..4294)
                     /locus_tag="ACFJCW_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HFC4151973.1"
                     /translation="MKKLSRIVFSIVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVAAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHKRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(4432..5331)
                     /gene="prmB"
                     /locus_tag="ACFJCW_001907"
     CDS             complement(4432..5331)
                     /gene="prmB"
                     /locus_tag="ACFJCW_001907"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HFC4151974.1"
                     /translation="MFNQAAQELTTIRDVLRFAVSRFNEAGLFFGHGTDNAHDEAVYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIVPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINIEDYGLEERIQLIHTDLFEGLEGTYDLIVSNPPYVDAESVGALPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            5475..5882
                     /locus_tag="ACFJCW_001908"
     CDS             5475..5882
                     /locus_tag="ACFJCW_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151975.1"
                     /translation="MADGMGNLIGWEETGLVEGKQWITAKDDKVSDVCNANGGMGVIG
                     LHEPFSHGALTIPEHPNGRCAVVPVVGRTGKLAKGSRAMETGDGRQVRLFPYRAANWG
                     NLLKQRSFVKRLCSMRVITLSAKAMSMKAAGMN"
     gene            5816..6148
                     /locus_tag="ACFJCW_001909"
     CDS             5816..6148
                     /locus_tag="ACFJCW_001909"
                     /inference="COORDINATES: protein motif:HMM:NF037911.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151976.1"
                     /translation="MQYARDNFVGKSYVNESSGHELKVTWQGVKHAASKSNSIELSLM
                     VALDKVLMNAKYEGSFPNKLGRDHIIAVHKYSTGVRFGNKVLKIRIIAREKFDGIKHY
                     DHFILKDK"
BASE COUNT         1695 a         1564 c         1459 g         1558 t
ORIGIN      
        1 caaatagagt ataaatttgg gaaagcaatt atatcaggaa aagcaaaccg ccttcctacc
       61 tgaaaactgc tgctctggct tgaagacaca aggttcttta atattttaaa agccttgccg
      121 ttggattata attccccaat tgatttctta attttgctaa taaacacttg tttggtaagg
      181 aatgaattta tgcggccttt gaacgtgcag atcaggttgg gcaaccttag gcacaattat
      241 cggattttga aggaaatgca cggaggcaag ctgttggcgg tagtgaaggc cgacgcatac
      301 ggacacggtg cggtcagatg tgctttcgcg ctggcagact tggcagacgg ctttgccgtg
      361 gcgacaatcg acgagggaat caggctgcgg gagagcggca ttacccatcc gattgtcctt
      421 ttagaaggcg tatttgaagc atcagagtac gaagcggtcg aacaatactc gctttggccg
      481 gcagtcggaa accaatggca gcttgaggct ttgctttccc gccattggaa aaaacctgtc
      541 aaggtctggt tgaaaatgga ttcgggaatg caccgtaccg gatttttccc tcatgattac
      601 gcttcggcat atgcggcatt gaaacagtcg gaatatgtgg acagtattgt caagttctcg
      661 catttctcct gtgcggacga acctgaaagc ggtatgacgg aaatacagat ggaagcattc
      721 gatttgggta cgaaagggct ggaaggcgaa gaaagccttg ccaattcggc agctattttg
      781 aatatccccg aagcacgcag ggattggggg cgcgcgggct tggcgttata cggcatttcc
      841 ccgttcggag gcagcgatga caggctgaaa cccgtgatga ggctttcaac ccgtattttc
      901 ggcgaacgcg ttttacagcc gcactcccct atcggttatg gcgcaacatt ttataccagt
      961 aaatctacgc gcgtcggtct gattgcctgc ggttatgcgg acggttatcc gcgccgcgct
     1021 ccaagcaatt cccccgtcgc cgtcgacggt aaattgaccc gggtcatcgg caggatctct
     1081 atggatatga tgactatcga gctggacgct tcgcaagaag gtttgggaca cgaggtcgaa
     1141 ctgtggggcg atacggtcaa tatcaatacc gttgccgaag cggccggaac catcccttac
     1201 gaattgatgt gcaatatcaa acgtgcaaaa ttcacttata tcgagtaatc gagtccaaac
     1261 gaaaatcccg tctgaagctt ttcagacggc ataaatgcgt tttgacaaaa tcagtaaaag
     1321 acattgccaa atagaaaata ctgataatgc ccacaatctg aaaccccatc cttcccgcaa
     1381 aaacggaaaa tcaaaatcag aaacctaaaa tttcgtcatt cccgcgcagg cgggaatccg
     1441 gttttttgag tttccgtcat ttctgataaa ttctcgtcgt ttttcatttc tagattcccg
     1501 catgcgcggg aatgacaaaa ttaaagtttc agaatttatt tgaacaacaa actagattcc
     1561 cgctttcgtg gggatgacgg cggataggtt ttgttgtttc ggataaattc ctgttgtttt
     1621 ttggtttcca gattcccacc tttaaaagaa tgacgtaaga aagcagaaat aagaacacgg
     1681 ggatttttta aatttgcaat attcttttct aaagacattt tacccaatgc ccataaacaa
     1741 aaatgccgcc tgaagccttt cagacggcat tttcccatca aaaccgcaat cagtttttca
     1801 tcgattgaac cggtgcggga atcctgccgc cccggttgac gaacacttcg cacgaacctt
     1861 cttttgccgg cattacaggc gcgtagccca acagaccgcc gaactcgacg ctgtcgccga
     1921 cggttttgcc cgttaccgga ataatgcgca cggcggtggt tttgctgttg atcatgccga
     1981 tggcggcttc gtcggcgatg atgccggaaa tggtgtgcgc gggcgtgtcg ccgggaacgg
     2041 caatcatgtc caaaccaacg gagcagacgg cggtcatggc ttcgagtttg tccagcgtca
     2101 acacgcctgc ctcggcggcg gcaatcatac cttcgtcttc ggaaacgggg ataaacgcgc
     2161 cgctcaaacc gccgaccgcg ctggaagcca tcatgccgcc ctttttcacg gcatcgttca
     2221 gcaatgccaa agctgctgtt gtgccgtgcg taccgcagac gctcaagccc atttcttcaa
     2281 gaatgcgcgc caccgagtcg ccgacggcgg gggtcggtgc cagcgacaaa tcgagaatgc
     2341 cgaacgggat attcagcatt tttgaggctt cgcggccgat gagttcgccc acgcgggtga
     2401 ttttgaaagc ggttttcttc acgacttcgg cgacctcggt caggctgacc gcgtccgaat
     2461 tttccagcgc ggctttgacc acgcctggac cggatacgcc gacattaatc acagcatccg
     2521 cttcgcccga gccgtggaac gcacccgcca taaacggatt gtcttccacc gcgttgcaga
     2581 acacgacgat tttggcgcag ccgaaacctt cgggcgtgat ttcagccgtg cgtttgatgg
     2641 tttcgcctgc cagcttgacc gcatccatat tgataccggc acgcgtgctg ccgatattga
     2701 tggagctgca cacgatatcg gtagttttca tcgcttcggg aacggaacgg atcaacacct
     2761 catccgaagg cgacatacct ttttgcacca gcgcggaaaa gccgccgata aaggacacgc
     2821 cgatggcttt ggctgccttg tccaaagtct gcgccacgct gacataactg tcggctttgg
     2881 tcgccgccgc gatttgggca atcggcgtaa cggaaatgcg ctgattcaca atcggcacgc
     2941 cgtatttggc ggaaaggtgt ttcgccgttg ccaccaagtc tttgccgacc gtggtgattt
     3001 tgttgtaaat gttttggttt aacacgtcga tgtcggtgct gatgcagtcg tgcaaatcaa
     3061 tgccgatggt aatggtgcgg acatcaaaat tctggtcggc aaccattttg acggtttcta
     3121 aaatttcgcc ggattggata ctcatcacat tcctccgact caaatgcggt gcatcgcttg
     3181 gaagatttct tcgttttgca tacggatgtc aagcgcgagt tttttgctct cttccgcaaa
     3241 caaatccaaa atctcctgcc gcgatttagg gcatttcgag gtatccacca agataatcat
     3301 agtaaaaaaa tcgtccatca gctgttggct gatattgagg atgttgattc ggttttccgc
     3361 caaaattttg gaaacatcgt acacgatgcc gacgcggtct ttaccgatga cggtgatgac
     3421 tgaattgttc acaggcttac tccttgcaga tatccgttaa aatccgaaat tataccaccg
     3481 tcggattttg aagaatattg tcaacaatat atacatacaa aatgccgtct gaaactattt
     3541 cagacagcat caagattcag ggttcgatta aataaccatc cttatcccat tgggttttcc
     3601 tgaccaactt gtcatcctga taaacagcct cgctcttttt agaaccatct tcataccact
     3661 ccaaaaccac cccgttgcgt ttatggtggc ggatagacag ttccgaaagt aatcggccgc
     3721 tttcatccca agtcagaatt ttggcaggct catcgttgac cataaccatt tccgtcttga
     3781 tacttccatc ggcataccat tgcttccata cgccgttcgc cttattttgc ttaaactgga
     3841 tttcgctttc cttgccgccg ttacggtaat aacggtatcc cgtaccctca ctcaagccat
     3901 ttttataagg cataaccgca gattttttac cgttcggata ccagttgacc cattccccgt
     3961 ccggcttacc cttgctgaag ccccccgcca tttttttctg accattaaaa tgccacaaaa
     4021 tcaacatacc gttttgcagg gtaggcacaa aagatttgat ttgcgttgaa gcaacgatat
     4081 aaggttcgga atatttcttc atcgacggat aataaaaatc ctgcgcgtgt gcgatacccg
     4141 ccgccacact atattgcctg atataagcgg cagaagacat cgtcgccgtc agtttcccgt
     4201 tctgattaaa ataaacagaa taggtctgcg ccggcaaagc ggccgaaaaa cccaacagta
     4261 cgattgaaaa tacaatccga gataatttct tcattatgat agcgatataa aaaacaatta
     4321 acttataaac aatatggtaa ggatttctca accaagcgtc aaacccgaaa caatgtatcg
     4381 taaaaatgcc gtctgaaaac aaatcgtctt cagacggcat ttccctccaa ctcactcttc
     4441 gcccaataac tgctcgcgcg tcaagaggaa aacaaaaccg tcgcccccgc tggtttccaa
     4501 ccaagtaaaa ggcaactccg gatacgctgc ttccaataca tccctgttat gcccgatttc
     4561 caccagcaat acacctttag gattcagaaa ctttgccgca ttcagaagaa tctgcctggt
     4621 ggcatccaac ccgtccgccc cgctgcccaa cgccaattcc ggttcgtgca aatattcctc
     4681 aggcaaagcc ccaaccgact ctgcatccac ataaggcgga ttggaaacaa tcaaatcata
     4741 agtgccttcc agtccctcaa acaaatcggt atgaataagc tgaatacgct cttccagacc
     4801 ataatcttca atattgatcc ctgcaacttc caaagcatcc aaactcacat caaccgcatc
     4861 aatttgggca tcaggataat ggtgcgccat ctgaatggca aggcaaccgc ttccggtgca
     4921 aagatccaaa gcattatgca ccagctcatc gtattctatc caaggtcgaa gtccgtcacc
     4981 cagcaattca taaataaaag agcgcggtac aatcacgcgt tcatctacat aaaaatcaaa
     5041 ctccccctgc caggcctggt gtgtcaaata agcggcagga atgtgttcga cagcacgacg
     5101 ctcaataacc gccagcactt cctctttttc agcttccaag agttttgcat caagatatgg
     5161 ggcaagcata tccaaaggca aattcaaagt atgcagaatc aaataaaccg cttcatcatg
     5221 cgcattatct gttccatgac caaaaaagag ccctgcctca ttaaaacggc tgactgcaaa
     5281 acgtaaaaca tcacggatag tcgtcaattc ttgtgcggcc tgattaaaca taatatgaac
     5341 cattctgcgt atagatgctt ttaattataa cagaaacaac aagcaaacct tttcatatcg
     5401 ccaaataacc actcaatcta cccatacaac tacataaatg ccgcgcgaag accattgccc
     5461 gaacggaaac ggcgatggcg gacggtatgg gcaacctgat aggctgggaa gaaacggggc
     5521 ttgttgaggg caagcagtgg ataaccgcaa aagacgacaa ggtgtccgat gtctgcaatg
     5581 ccaacggcgg gatgggcgta atcggtttgc acgagccttt ctcccacggt gcgttgacga
     5641 tacccgagca tccaaatggc aggtgcgcgg ttgttcccgt tgtcgggcgg acaggcaagc
     5701 tggcgaaagg cagccgcgcg atggaaacgg gcgatggacg gcaggtgagg ttgtttccgt
     5761 atcgggcggc gaattggggg aatttgctga aacaaaggag cttcgtaaag cggctatgca
     5821 gtatgcgcgt gataactttg tcggcaaaag ctatgtcaat gaaagcagcg ggcatgaact
     5881 gaaggtaact tggcaaggtg tgaaacacgc tgcgtcaaaa tcgaacagca tcgaactttc
     5941 ccttatggtc gcgcttgata aagttttgat gaatgcaaaa tatgaaggaa gttttcctaa
     6001 caaattaggg agggatcata ttattgcggt acacaaatac tcaaccggtg tcagatttgg
     6061 caataaagtc ttaaaaatca ggataatagc ccgtgagaaa tttgatggga taaaacatta
     6121 cgatcatttt attttgaaag acaaatgaaa aaaccctgtc cagtatatct gggatagctt
     6181 atggaagcat ttaacccagc ctcggataag gctttaaatc catcatgcca tttatacggt
     6241 aaaaacaagg gtctgtacta gattagcaga tatgtt
//
LOCUS       DAXGCP010000105         6218 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.106, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000105 DAXGCP010000000
VERSION     DAXGCP010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6218)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6218)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6218
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.106"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..280)
                     /locus_tag="ACFJCW_001910"
     CDS             complement(<1..280)
                     /locus_tag="ACFJCW_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151977.1"
                     /translation="MASYVSIKGWIECSDDDIKIIQENINNFWNNCPFNIEEKESAKI
                     YKSGWVFPTNSFNWSSYIFFGACVKSYFIIYFEKCIKTIMELDIEISGF"
     gene            complement(283..882)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001911"
                     /pseudo
     CDS             complement(283..882)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
     gene            complement(938..1219)
                     /locus_tag="ACFJCW_001912"
     CDS             complement(938..1219)
                     /locus_tag="ACFJCW_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151978.1"
                     /translation="MGNGHQNNQSSLEKRIFYLEHSGQYLMICALSDYSQNKHTVVMA
                     NFLYPNEKMDWRNLDDLFNELVLEELQSSFMDWYPTIEKAISHHLEDFS"
     gene            complement(1197..1721)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001913"
                     /pseudo
     CDS             complement(1197..1721)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951299.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
     gene            complement(1769..2104)
                     /locus_tag="ACFJCW_001914"
     CDS             complement(1769..2104)
                     /locus_tag="ACFJCW_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151979.1"
                     /translation="MMADKEQVEKMIYSENKDCVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLRSKQGNPDFQGFAEDALDDI
                     SFFIFKKRP"
     gene            complement(2101..2832)
                     /locus_tag="ACFJCW_001915"
     CDS             complement(2101..2832)
                     /locus_tag="ACFJCW_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC4151980.1"
                     /translation="MVKTADGYKAIARIRAGESVLSKDEASGETGYKPVTARYGNPYR
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLLSESGRTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGNRAETEGVWVHNECPYGKGNQRYKDAPYHGKNDNSV
                     KSRAPTNGQAVLDNSVQVKSTSSQRVGVDKTNNEIVVLNQTRIFNDGSAEYHGHVRNW
                     KNLHTDQQNALKKAGLVNSKGKIKK"
     gene            complement(2967..3510)
                     /locus_tag="ACFJCW_001916"
                     /pseudo
     CDS             complement(2967..3510)
                     /locus_tag="ACFJCW_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227004.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
     gene            complement(3637..3864)
                     /locus_tag="ACFJCW_001917"
     CDS             complement(3637..3864)
                     /locus_tag="ACFJCW_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151981.1"
                     /translation="MEIKFNTLGVILNGVNPEEKFIKIIDGQENTGGFLILLSSNDKF
                     SSFDSYDDWVENLEILKEYLQESHWIIKWVG"
     gene            complement(3923..4246)
                     /locus_tag="ACFJCW_001918"
     CDS             complement(3923..4246)
                     /locus_tag="ACFJCW_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HFC4151982.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKPMIIEFFIGGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFGIAQKNDCNYEGF
                     GSYGN"
     gene            complement(4236..4589)
                     /locus_tag="ACFJCW_001919"
     CDS             complement(4236..4589)
                     /locus_tag="ACFJCW_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151983.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQTGLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            complement(4886..5434)
                     /locus_tag="ACFJCW_001920"
     CDS             complement(4886..5434)
                     /locus_tag="ACFJCW_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HFC4151984.1"
                     /translation="MDYNQTVLSHLQKFWKHHDIKGFTWTLGRIVEELPDFQVFQVIP
                     NHEDEPWVYVSSGIGQFLGQEFFIISPFETPEHIETLAMLASASMHYPDQFQLGKTVN
                     IGRPWVEQSSFRHFLISLPYPYGQELEYMDNVRFFWLLPITQTERLFLNTHSVEELET
                     KFDEAGIDYLDINRASTVWQAG"
     gene            complement(5424..>6218)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001921"
     CDS             complement(5424..>6218)
                     /gene="mafB"
                     /locus_tag="ACFJCW_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC4151985.1"
                     /translation="KSYTCSFHGSTLVKTADGYKAIAHIQAGDRVLSKDEASGKTGYK
                     PVTAQYGNPYQETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLLSES
                     GKTQTVRNIVVKPKPLKAYNLTVADWHTYFVKGDKAETEGVWVHNDCPTKLKPTERYN
                     RQTHYGGSQTDGARAQAARQAGEGKPCPTCGRIQIFGTKTAPSPQHEPPLVKHYYEHG
                     GHSMSNADRAKHARESIKGTQCLTCQRKEGAMMSRYSREQAKKHGL"
BASE COUNT         1686 a         1316 c         1143 g         2073 t
ORIGIN      
        1 aaaaacctga tatttcaata tccaattcca ttattgtttt aatacatttt tcaaaataaa
       61 taatgaaata agattttacg catgcaccaa aaaaaatata gctgctccaa ttaaaactat
      121 ttgtcgggaa aacccacccg cttttatata tttttgcaga ttctttctct tcgatattaa
      181 agggacaatt attccaaaaa ttattaatgt tttcttggat gatttttata tcatcgtcag
      241 agcattcaat ccatcctttt atggaaacat atgatgccat gtttaatctc ctaaacctgt
      301 tttaacaatg ccgccttttg attcaatata tgacttaact tgtgaatgaa caccgtattt
      361 aaaccaaaat tctgcacgtt ttccctgttg gtttgctgct tcgatggttg ctttaatttg
      421 ctttctattt ttttgattta agaaattttt aggtttatct attgctgaaa ttgttctttt
      481 ggcttgtatt aaagcatcat tcgtaacagc gtcaatttct ctaccgttaa caagttttga
      541 tgtaccatcg gtttttcttc taattaaatc ttcataatgt atatctagag cttctctata
      601 ctttgcattt tgatataact gtctcgcact atcagacaaa gccaatttct ttttataaga
      661 atcagcaaaa tccccgctaa ccgcagcctt ccctggtttt gccgcctttg ccaacttcgc
      721 gactttggct gctgcggcaa cgttgaagac ggcttcgacg gtttcggcgg cattgggatt
      781 ttcctgtatc caccggtcaa cggcttcgcg tatggaattt tctctatcag agagataact
      841 caatttcccg atagctgtaa attcataatc cgccgatatg gggaaaggtc gtctgaaaat
      901 taaaagcagt ttcagacgac tttttgattt atgcttgtta cgaaaagtct tctaaatgat
      961 ggctaattgc cttttcaata gttggatacc aatccataaa tgaagactgt aattcctcta
     1021 aaaccaactc attgaacaaa tcatctaaat ttctccaatc cattttttca tttggataga
     1081 ggaaattcgc cataacgaca gtatgtttat tttgggagta atccgatagg gcgcaaatca
     1141 tcagatactg ccccgaatgc tccagataaa aaattctttt ttctaaggaa gattgattat
     1201 tttggtgtcc atttcccatt ttttaccctt tttgacgtat tggctttcga gttcttaaat
     1261 tgagttacct gtcttccatc aggagttaga ataaccactt tatctccttt tacataaaca
     1321 tggtttcctg tgtcggaatc taaatattgc tttccttcgc gaacgacacg attggaatct
     1381 cccacacttc gatgagaatc gtttttagct tcttcttttc tttgttgggc atgattggtt
     1441 ggttttggtt taggcggaca atcattatga acccaaactc cttccgtttc cgcctgacta
     1501 cccttgacga aataagtatg ccagtcggcg acggtcagat tgtaggcttt gagcggttcc
     1561 ggtttgacgg taacgctttg aacggtctgc tctgcaccgt tttcagcaaa cagcctgctt
     1621 cccgctttca aatcttccgc tttaatccat ttgccgtccg aataaaacgg atggatgcgg
     1681 ttggaaatca gggtttggct gttaccgatg ccgtctgaaa gccggaatgt actttcagac
     1741 gcatcggatt tccgggttta atccgcgctt acggacgctt tttaaatata aagaaggaaa
     1801 tatcgtctaa cgcatcttcg gcaaaacctt gaaaatccgg attaccttgt tttgagcgca
     1861 ataaagcaat cactttatcg caatcgccga tattttcatg catcctggcg agatgtccga
     1921 aacaggttaa tgacaatctg gcaatatcca agtctttatg cttcgacaac tccgtcaatt
     1981 tctcggaaat ccaagggatt tcatcctcct ccgagctgaa ggtcataccg agcataccat
     2041 caataacaca atctttattt tcagaataaa tcatcttttc tacttgttcc ttatcagcca
     2101 tcattttttg atttttcctt ttgaattaac caatcctgct ttctttaaag cattttgttg
     2161 atcagtatgt aaatttttcc agttccttac atgcccatga tactcagcag aaccgtcatt
     2221 aaaaattcta gtttggttta atacaacgat ttcattattg gttttatcaa ctccaactct
     2281 ttgagaagat gtcgatttaa cttgaacaga gttatcaagg acagcttgcc catttgttgg
     2341 cgctctactt ttcacagaat tatcattttt accatgataa ggagcatctt tatatcgttg
     2401 gttgcctttt ccatacggac actcattatg aacccaaacc ccttccgttt ccgcccgatt
     2461 gcccttgacg aagtaagtat gccagtcggc aacggtcaga ttgtaggctt tgagcggttt
     2521 tggtttgaca acggtgttgc ggacggtttg ggttctgccg ctttcggata acagtctgct
     2581 tcccgccttt aaatcttccg ctttaatcca tttgccgtcc gaataaaacg gatggatgcg
     2641 gttggaaatc agggtttggc tgttaccgat gccgtctgaa actttaatgt aaacggtttc
     2701 ccgatacgga ttaccgtatc gggcggtaac gggtttgtat cccgtttctc cgcttgcctc
     2761 gtccttggag aggacgctct cgccggctcg gatacgggca atggctttgt agccgtctgc
     2821 cgttttgacc aaggtgctgc cgtggaaagg gcaggtgtag gatttttgaa gaacttagtt
     2881 ttcaatattc tgtttcaaat gaaggaaaga ccgtctgaaa aacaagctta atttcagacg
     2941 acctttaatc aaatttaaga aagcccttac caaacaaacg gtttcctatt catatccgaa
     3001 aggttgccaa cttcattatc caacaagaac tgctcaaaag cattccaacc ctttttttcc
     3061 accaattcgg cttcctgttt atacaagggg acaagcaaag ggaaaacaat attgtagtgt
     3121 tcgccataac agacttggaa atcatcgtcg aaataaaatg gggcggaaac atacagtgca
     3181 tccatttttg ttgaattaac aatgcttcta ggcaaataaa caacctgccc ccgaagaagg
     3241 atttttttta ttctcaatga tggtttctgc taaccatctt aaaaatggga aaatctgatt
     3301 ttcatcatat tttaaagaac atacaaaaag tatttcaaat ctgcttttat aattcagatc
     3361 atgtttgctt aaccctaaag taatataagt ttttaaatcc ctgttagggg aagagggaat
     3421 agctgcgata tttaatttgt actgacttcc cgaatcgctt ttcgagccat gagaaatagt
     3481 gcctatatat ttttcaatat gattaatcat atttttctta gcttcccatc actgtatcga
     3541 ataatcataa accggattga gacaaaacgc cttgttccca ttggtagaaa gtccgtctga
     3601 aaagtaaaag cgtttcaaac ggactacgtt tgccgactat ccgacccact ttattatcca
     3661 atgagattct tgcaggtatt cttttaatat ttctaagttt tcgacccagt catcgtaact
     3721 gtcaaatgat gagaatttgt catttgaaga taacagtatc agaaatccac cggtattttc
     3781 ctggccatca ataattttta tgaatttttc ttcaggattg accccattca ggataacccc
     3841 caaagtattg aattttattt ccatagacat cccctaatct ttaatgggaa tatggttttt
     3901 tcaacccaac ctacactttt tgttagttcc catacgaacc aaaaccttca taattacaat
     3961 catttttttg tgcaatacca aataacgtag tttcaatagc taaaatgttt tcaagggaag
     4021 ggacgatatt gacggaacaa tagcaagtcc acatttctcc gaattcatct tgttcaatac
     4081 tgatttgaaa atcttgccga taagaaatga gttggctttc tattgattgc agattttttt
     4141 gagaacctcc tataaaaaac tctattatca taggttttgt caaatcaaac cctagttctt
     4201 gatattgttt cagtacatct gaagtagatt tttcgtcaat tatcatttaa tagcaattca
     4261 tcaaaccata cgtcttcata accgttttcc ccaattaaaa aacggtaacc gggcggaagt
     4321 gtcaaaaagg ggatgatttc gggtcgccat atttgcaaat ggaacgtatg caagggcagg
     4381 aaaaaatttt tatcatagga gaagttttca ccggcccaga tataccaacc gttagtatca
     4441 cctttgggac ggtgccttaa cccgttaatc ggatacaggc ctgtctgttt gacattttca
     4501 gcaacaccga tttttgaaac atcggaaaca ggatatattt ctgtattata ttttttacaa
     4561 attattattt gttcattttt tattcccatt actcagtttc tttttctgtt cttttgaata
     4621 ttggcttaat ctccctccct gttttgcaga acaagtcgga cattgcgctt gtaccgattc
     4681 aattacctgg cttcatcttg cttcatcttt ggcaaggata cgggcaataa tttttcatcc
     4741 gtctgccgtt ttgactaaag caccgacgta taagggacgg agataggatt tttgaagaac
     4801 tcagttccca gtatcctgtt ccattcatca gaataccgtc tgaaagtcca aacttgtttc
     4861 agacggcatt ttgattgccg aatttttatc ctgcctgcca gacagtactc gcacgattta
     4921 tatctaaata atcaataccc gcttcatcaa atttcgtttc caattcttct accgaatgag
     4981 tattcaagaa aagtctttct gtctgggtaa ttggcaataa ccagaaaaat cggacattat
     5041 ccatatattc caactcttgc ccataaggat aaggcagaga aatcagaaaa tgccggaagg
     5101 atgattgctc gacccacggt ctaccgatat tgacggtttt ccctaattga aattgatcag
     5161 gataatgcat acttgcagat gccagcattg ccaaggtctc aatatgttca ggtgtttcaa
     5221 acgggctgat gataaaaaac tcctgcccta aaaattgacc tatcccagag ctgacataaa
     5281 cccaaggctc atcttcatga ttaggaatca cttggaaaac ttggaaatcg ggaagttctt
     5341 caacaattct tcctaaagtc caagtaaatc ctttaatatc atgatgtttc caaaattttt
     5401 gcaagtgaga taaaacagtt tggttatagt ccatgctttt tagcctgttc tctcgaatat
     5461 cttgacatca tcgcaccctc tttcctttga catgttaaac attgagttcc ttttatgctt
     5521 tccctggcat gtttcgctcg atcagcattg ctcatagagt gaccaccatg ttcatagtaa
     5581 tgttttacta atgggggttc atgttgcgga cttggtgcgg ttttcgtacc aaatatctga
     5641 attctaccac aagttggaca aggtttacct tctcctgcct gtcttgctgc ctgagccctt
     5701 gctccatctg tttgagaacc tccataatgc gtttgacgat tataacgttc tgtcggtttt
     5761 agtttggttg gacaatcatt atgaacccaa accccttccg tttccgcctt atcgcctttg
     5821 acaaagtagg tatgccaatc ggcaacggtc agattgtagg ctttgagcgg ttttggtttg
     5881 acaacgatgt tgcggacggt ttgggttttg ccgctttcgg ataacagccg gcttcccgct
     5941 ttcaaatctt ccgctttaat ccatttccca tccgaataaa acggatggat gcggttggaa
     6001 atcagggttt ggctgttgcc gatgccgtct gaaactttaa tgtaaacggt ttcttgatac
     6061 ggattaccgt attgggcggt aacgggtttg tatcctgttt tcccgcttgc ctcgtccttg
     6121 gaaaggacgc ggtctccggc ttgaatatgg gcaatggctt tgtagccgtc tgccgttttg
     6181 accaaggtgc tgccgtggaa ggagcaggtg taggattt
//
LOCUS       DAXGCP010000106         6216 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.107, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000106 DAXGCP010000000
VERSION     DAXGCP010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6216
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.107"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            356..1896
                     /locus_tag="ACFJCW_001922"
     rRNA            356..1896
                     /locus_tag="ACFJCW_001922"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
     gene            1997..2073
                     /locus_tag="ACFJCW_001923"
     tRNA            1997..2073
                     /locus_tag="ACFJCW_001923"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2031..2033,aa:Ile,seq:gat)
     gene            2079..2154
                     /locus_tag="ACFJCW_001924"
     tRNA            2079..2154
                     /locus_tag="ACFJCW_001924"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2112..2114,aa:Ala,seq:tgc)
     gene            2502..5393
                     /locus_tag="ACFJCW_001925"
     rRNA            2502..5393
                     /locus_tag="ACFJCW_001925"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            5490..5603
                     /gene="rrf"
                     /locus_tag="ACFJCW_001926"
     rRNA            5490..5603
                     /gene="rrf"
                     /locus_tag="ACFJCW_001926"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            5639..5758
                     /locus_tag="ACFJCW_001927"
                     /pseudo
     CDS             5639..5758
                     /locus_tag="ACFJCW_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComE"
     gene            5860..>6216
                     /locus_tag="ACFJCW_001928"
     CDS             5860..>6216
                     /locus_tag="ACFJCW_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HFC4151986.1"
                     /translation="MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLF
                     SCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLIKVKGIGPA
                     VLAKLKDQASVGAPAPK"
BASE COUNT         1664 a         1355 c         1850 g         1347 t
ORIGIN      
        1 agcgtttggc ggagataaaa aaccttatcc gacagcgaca tgacgaattt ccccaaaaaa
       61 atcccgctga aagtattgac tgttttcccc tgcgggcgta tagttcggtt cttcgccgct
      121 gccgaagcgg cggacgaact gaaaagtata gcacggaatg tcggaaatat cgagagatat
      181 cttagacagg cggaagggat actttataat ttcgcaacgc tctttaacaa aacagattac
      241 cgataagtgt gagtgccttg ggcctcgcac tgtttgaaag acagacgaga tgatgttttg
      301 aacattgtcc tgtcggtttc tttgaagcag accagaagtt aaaaagttag agattgaaca
      361 taagagtttg atcctggctc agattgaacg ctggcggcat gctttacaca tgcaagtcgg
      421 acggcagcac agggaagctt gcttctcggg tggcgagtgg cgaacgggtg agtaacatat
      481 cggaacgtac cgggtagcgg gggataactg atcgaaagat cagctaatac cgcatacgtc
      541 ttgagaggga aagcagggga ccttcgggcc ttgcgctatc cgagcggccg atatctgatt
      601 agctggttgg cggggtaaag gcccaccaag gcgacgatca gtagcgggtc tgagaggatg
      661 atccgccaca ctgggactga gacacggccc agactcctac gggaggcagc agtggggaat
      721 tttggacaat gggcgcaagc ctgatccagc catgccgcgt gtctgaagaa ggccttcggg
      781 ttgtaaagga cttttgtcag ggaagaaaag gccgttgcca atatcggcgg ccgatgacgg
      841 tacctgaaga ataagcaccg gctaactacg tgccagcagc cgcggtaata cgtagggtgc
      901 gagcgttaat cggaattact gggcgtaaag cgggcgcaga cggttactta agcaggatgt
      961 gaaatccccg ggctcaaccc gggaactgcg ttctgaactg ggtgactcga gtgtgtcaga
     1021 gggaggtgga attccacgtg tagcagtgaa atgcgtagag atgtggagga ataccgatgg
     1081 cgaaggcagc ctcctgggat aacactgacg ttcatgtccg aaagcgtggg tagcaaacag
     1141 gattagatac cctggtagtc cacgccctaa acgatgtcaa ttagctgttg ggcaacttga
     1201 ttgcttggta gcgtagctaa cgcgtgaaat tgaccgcctg gggagtacgg tcgcaagatt
     1261 aaaactcaaa ggaattgacg gggacccgca caagcggtgg atgatgtgga ttaattcgat
     1321 gcaacgcgaa gaaccttacc tggttttgac atgtgcggaa tcctccggag acggaggagt
     1381 gccttcggga gccgtaacac aggtgctgca tggctgtcgt cagctcgtgt cgtgagatgt
     1441 tgggttaagt cccgcaacga gcgcaaccct tgtcattagt tgccatcatt cggttgggca
     1501 ctctaatgag actgccggtg acaagccgga ggaaggtggg gatgacgtca agtcctcatg
     1561 gcccttatga ccagggcttc acacgtcata caatggtcgg tacagagggt agccaagccg
     1621 cgaggcggag ccaatctcac aaaaccgatc gtagtccgga ttgcactctg caactcgagt
     1681 gcatgaagtc ggaatcgcta gtaatcgcag gtcagcatac tgcggtgaat acgttcccgg
     1741 gtcttgtaca caccgcccgt cacaccatgg gagtggggga taccagaagt aggtagggta
     1801 accgcaagga gtccgcttac cacggtatgc ttcatgactg gggtgaagtc gtaacaaggt
     1861 agccgtaggg gaacctgcgg ctggatcacc tcctttctag agaaagaagg ggctttaggc
     1921 attcacactt atcggtaaac tgaaaagatg cggaagaagc ttgagtgaag gcaaggttcg
     1981 cttaagaagg gaaaccgggt ttgtagctca gctggttaga gcacacgctt gataagcgtg
     2041 gggtcggagg ttcaagtcct cccagaccca ccaagaacgg gggcatagct cagttggtag
     2101 agcacctgct ttgcaagcag ggggtcatcg gttcgatccc gtttgcctcc accaaaactt
     2161 tacaaatgaa agcaagtttg ctgtttttag cagcttattt tgatttgcga agtagaataa
     2221 cgacgcatcg atctttaaca aattggaaag ccgaaatcaa caaacaaaga caatgagttt
     2281 gttttgattt tttattcttt gcaaaggata aaaaatctct cgcaagagaa aagaaaacaa
     2341 acatagtatt tgggtggtga ttgtatcgac ttaatcctga aacacaaaag gcaggattaa
     2401 gacacaacaa agcagtaagc tttatcaaag tagggatttc aagtttgctt acttagtcaa
     2461 cgggtaggta aacgaagtca aagaagttct tgaaatgata gagtcaagtg aataagtgca
     2521 tcaggcggat gccttggcga tgataggcga cgaaggacgt gtaagcctgc gaaaagcgcg
     2581 ggggagctgg caataaagct atgattccgc gatgtccgaa tggggaaacc cactgcattc
     2641 tgtgcagtat cctaagttga atacataggc ttagagaagc gaacccggag aactgaacca
     2701 tctaagtacc cggaggaaaa gaaatcaacc gagattccgc aagtagtggc gagcgaacgc
     2761 ggaggagcct gtacgtaata actgtcgaga tagaagaaca agctgggaag cttgaccata
     2821 gcgggtgaca gtcccgtatt cgaaatctca acagcggtac taagcgtacg aaaagtaggg
     2881 cgggacacgt gaaatcctgt ctgaatatgg ggggaccatc ctccaaggct aaatactcat
     2941 catcgaccga tagtgaacca gtaccgtgag ggaaaggcga aaagaacccc gggaggggag
     3001 tgaaacagaa cctgaaacct gatgcataca aacagtggga gcgccctagt ggtgtgactg
     3061 cgtacctttt gtataatggg tcaacgactt acattcagta gcgagcttaa ccggataggg
     3121 gaggcgtagg gaaaccgagt cttaataggg cgatgagttg ctgggtgtag acccgaaacc
     3181 gagtgatcta tccatggtca ggttgaaggt gccgtaacag gtactggagg accgaaccca
     3241 cgcatgttgc aaaatgcggg gatgagctgt gggtaggggt gaaaggctaa acaaactcgg
     3301 agatagctgg ttctccccga aaactattta ggtagtgcct cgagcaagac actgatgggg
     3361 gtaaagcact gttatggcta gggggttatt gcaacttacc aacccatggc aaactcagaa
     3421 taccatcaag tggttcctcg ggagacagac agcgggtgct aacgtccgtt gtcaagaggg
     3481 aaacaaccca gaccgccggc taaggtccca aatgatagat taagtggtaa acgaagtggg
     3541 aaggcacaga cagccaggat gttggcttag aagcagccat catttaaaga aagcgtaata
     3601 gctcactggt cgagtcgtcc tgcgcggaag atgtaacggg gctcaaatct ataaccgaag
     3661 ctgcggatgc cggtttaccg gcatggtagg ggagcgttct gtaggctgat gaaggtgcat
     3721 tgtaaagtgt gctggaggta tcagaagtgc gaatgttgac atgagtagcg ataaagcggg
     3781 tgaaaagccc gctcgccgaa agcccaaggt ttcctacgca acgttcatcg gcgtagggta
     3841 agtcggcccc taaggcgagg cagaaatgcg tagtcgatgg gaaacaggtt aatattcctg
     3901 tacttgattc aaatgcgatg tggggacgga gaaggttagg ttggcaagct gttggaatag
     3961 cttgtttaag ccggtaggtg gaagacttag gcaaatccgg gttttcttaa caccgagaag
     4021 tgatgacgag tgtctacgga cacgaagcaa ccgataccac gcttccagga aaagccacta
     4081 agcttcagtt tgaatcgaac cgtaccgcaa accgacacag gtgggcagga tgagaattct
     4141 aaggcgcttg agagaactcg ggagaaggaa ctcggcaaat tgataccgta acttcgggag
     4201 aaggtatgcc ctctaaggtt aaggacttgc tccgtaagcc ccggagggtc gcagagaata
     4261 ggtggctgcg actgtttatt aaaaacacag cactctgcca acacgaaagt ggacgtatag
     4321 ggtgtgacgc ctgcccggtg ccggaaggtt aattgaagat gtgcaagcat cggatcgaag
     4381 ccccggtaaa cggcggccgt aactataacg gtcctaaggt agcgaaattc cttgtcgggt
     4441 aagttccgac ccgcacgaat ggcgtaacga tggccacact gtctcctccc gagactcagc
     4501 gaagttgaag tggttgtgaa gatgcaatct acccgctgct agacggaaag accccgtgaa
     4561 cctttactgt agctttgcat tggactttga agtcacttgt gtaggatagg tgggaggctt
     4621 ggaagcagag acgccagtct ctgtggagtc gtccttgaaa taccaccctg gtgtctttga
     4681 ggttctaacc cagacccgtc atccgggtcg gggaccgtgc atggtaggca gtttgactgg
     4741 ggcggtctcc tcccaaagcg taacggagga gttcgaaggt tacctaggtc cggtcggaaa
     4801 tcggactgat agtgcaatgg caaaaggtag cttaactgcg agaccgacaa gtcgggcagg
     4861 tgcgaaagca ggacatagtg atccggtggt tctgtatgga agggccatcg ctcaacggat
     4921 aaaaggtact ccggggataa caggctgatt ccgcccaaga gttcatatcg acggcggagt
     4981 ttggcacctc gatgtcggct catcacatcc tggggctgta gtcggtccca agggtatggc
     5041 tgttcgccat ttaaagtggt acgtgagctg ggtttaaaac gtcgtgagac agtttggtcc
     5101 ctatctgcag tgggcgttgg aagtttgacg ggggctgctc ctagtacgag aggaccggag
     5161 tggacgaacc tctggtgtac cggttgtaac gccagttgca tagccgggta gctaagttcg
     5221 gaagagataa gcgctgaaag catctaagcg cgaaactcgc ctgaagatga gacttccctt
     5281 gcggtttaac cgcactaaag ggtcgttcga gaccaggacg ttgataggtg gggtgtggaa
     5341 gcgcggtaac gcgtgaagct aacccatact aattgcccgt gaggcttgac tctatcattt
     5401 gaaggacttc aagagataaa agcttactga ctgattcagt cattaccgaa tatattgatt
     5461 aaggctttac cgatttgcaa cagtttaagt ttggcggcca tagcgagttg gtcccacgcc
     5521 ttcccatccc gaacaggacc gtgaaacgac tcagtgccga tgatagtgtg gttcttccat
     5581 gcgaaagtag gtcactgcca aacacccttt cagaaaaccc ccggatatcc gggggttttt
     5641 gctttgcccg gaaaaaatgt cggggatggc gggacggcat ctgtacggtg tccggtcggg
     5701 tttgcggagg aacggcttga aactttggga tattcatttt agaatgaccc gttttatagc
     5761 ggattaacaa aaatcaggac aaggcggcgg gccgcaggca gtacggatag tacggaaccg
     5821 gttcgcccgg tgcttcatca ccttagggaa tcgttccctt tgagccgggg cggggcaacg
     5881 ccgtaccggt ttttgttaat ccgccatatc gtcgcaagat gcggtttgtt gtttgcaacc
     5941 cttaaaggaa aaaccatgaa aaaaatgttt gtattgttct gtatgctgtt ctcctgcgcc
     6001 ttctcccttg cggcggtaaa catcaatgcg gcttcgcagc aggagctgga ggcgctgccg
     6061 ggcataggcc cggcgaaggc gaaggccatt gcggaatacc gcgcgcaaaa cggcgcgttc
     6121 aagtctgtgg acgatttgat caaggtgaag ggcatcggtc cggcggtgct ggcgaagctg
     6181 aaagaccagg cttccgtcgg cgcgcccgca ccaaaa
//
LOCUS       DAXGCP010000107         6163 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.108, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000107 DAXGCP010000000
VERSION     DAXGCP010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6163)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6163)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6163
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.108"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..732
                     /locus_tag="ACFJCW_001929"
     CDS             <1..732
                     /locus_tag="ACFJCW_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006996595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HFC4151987.1"
                     /translation="DAKAPRVQVLFAEDYLSISLCDLWTNINTTGLEAEGNVELKNGK
                     KPESLIETIIKLATNENDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERM
                     KKVIDGEQGGISKAVNWQGGGEFVYAELSPFNETAKQQILACENSDGIKTLFEGLCER
                     HFLKYNVSVNEFSQIIEEPEFQSLALDEQKQMMLEMLDLNQMYISLSEMDDEQFAGCL
                     NDDDKALSRAFYQSVKHQAEKKDGE"
     gene            722..2746
                     /locus_tag="ACFJCW_001930"
     CDS             722..2746
                     /locus_tag="ACFJCW_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HFC4151988.1"
                     /translation="MANNKTLFDWVEDRKSMLEEMEQTDFFALPEFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMIAALILYYFEKGYRH
                     FLFFVNKNNIVYKTENNFIDPTHPKFLFTEKILQGDTVIPIRKVETFSQYSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEKEMNE
                     RTSDAEIERKGWEHMVAAATVSEKQLIGRGVRYFPFAFEGKQPNKRKFDNDMQHELRI
                     LEELFYYTHDEQSRYITELKNELRKDGYLPEKDDDKVLATFKLKSEFADNKDFRELLI
                     WANKKIPNPNAKSNNADSLQANPQTLSFQVHGNQLLQETQFTADENDETARQIGTQNN
                     FTQTIKMSEMERHIFNKALHIKGKNSQSLFHFDRLQSKLDIQNRNELQNKLLKDWQIE
                     FLGLEQDKQVRPDDKLAGCLKILEMVEKHLNESDIPFIGTKEFTPKKLWEIFGTPKQK
                     WVKKDDIKTAIATQNDWYVMDNFAGTGLEEALIQFISARLGDLKSQYDVHLIRNEEVF
                     KLNNFADGEGFMPDFVLLLKDKQKSSSDSVDDFLHYQIFIEPKGGHLVENDSWKEAFL
                     KSITVEYGRDKILQKNTPHYRLIGLPFFTDHQKNGQFTELFPLGAASLEK"
     gene            complement(2895..4067)
                     /locus_tag="ACFJCW_001931"
     CDS             complement(2895..4067)
                     /locus_tag="ACFJCW_001931"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HFC4151989.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGGDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTAEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALV
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDVSMAFTGHRDIQDVDASILRSKDWGRETV"
     gene            complement(4188..4430)
                     /locus_tag="ACFJCW_001932"
     CDS             complement(4188..4430)
                     /locus_tag="ACFJCW_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151990.1"
                     /translation="MVSLMVVVARVGFFIVGGIVQYLSVSVKYGGAVADCLFKWRYSL
                     ILLYLFGFLNQLVMFFEERRLGRFAGKRFQNDLIYF"
     gene            4417..4863
                     /gene="iscR"
                     /locus_tag="ACFJCW_001933"
     CDS             4417..4863
                     /gene="iscR"
                     /locus_tag="ACFJCW_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HFC4151991.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPPAQINIAQIISAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNGDGSRVVQFTHIH"
     gene            4892..6106
                     /locus_tag="ACFJCW_001934"
     CDS             4892..6106
                     /locus_tag="ACFJCW_001934"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HFC4151992.1"
                     /translation="MTVKTPVYLDYAATTPVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WTAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILISIMWVNNEIGVV
                     QNIPAIGEICRERKIAFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLEHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
BASE COUNT         1894 a         1539 c         1312 g         1418 t
ORIGIN      
        1 gatgcaaaag caccacgagt gcaggttttg tttgcagaag attatttgag tattagttta
       61 tgcgatttat ggacaaatat aaataccaca ggactagaag cagaaggaaa tgtagagtta
      121 aaaaatggta aaaagccaga aagtttaatt gaaaccatca ttaaactagc aaccaacgaa
      181 aacgacatcg ttctagacta ccacttgggc agtggcacaa ccgccgccgt cgcccataaa
      241 atgaaccgcc aatacatcgg cattgaacaa atggattata ttgaaacgct tgccgttgaa
      301 cgcatgaaaa aagtaattga cggcgagcaa ggcggtatct caaaagctgt gaattggcaa
      361 ggtggcggcg agtttgttta tgccgaactt tccccattta acgaaaccgc aaaacaacaa
      421 attttggcgt gcgaaaattc agacggcatc aaaacactgt ttgaaggttt atgcgaacgc
      481 catttcttga aatacaacgt cagcgtaaat gaatttagcc aaattattga agagcctgaa
      541 tttcaatcct tggcattaga cgaacaaaaa caaatgatgc ttgaaatgtt ggatttaaat
      601 caaatgtata tttcattatc cgaaatggac gatgaacaat ttgcaggctg cctgaatgat
      661 gacgataaag cgttaagccg tgcgttctat caatcagtaa aacatcaagc ggagaaaaaa
      721 gatggcgaat aataaaacgt tgtttgattg ggtggaagac cgcaaatcaa tgctggaaga
      781 aatggaacag acggattttt tcgcgctgcc tgaatttgtt tccaataatt taaaatatcc
      841 gttttttgaa tggcaaaaat cggctttaga aaactttgtg atttttgacc gcacttcaaa
      901 attaaaggat ttccccgaca tcaaaaaccg ccctacccat ttgctgttca atatggcaac
      961 aggtgcaggc aaaacgatga tgatagcggc attgattctg tattattttg agaaagggta
     1021 tcggcatttt ttatttttcg tcaataaaaa caatatagta tataaaacgg aaaataattt
     1081 tatcgacccg acgcatccaa aatttttatt taccgagaaa attttgcaag gtgatacggt
     1141 aattcccatt cgcaaagtgg agacatttag ccaatattca gacggcattg aaattaaatt
     1201 taccagcatt caaaaactat ataacgatat tcacaccgag cgagaaaatc aaaccacatt
     1261 ggcggatttg cacgaattaa atcttgtgat gctgggcgat gaagcacacc atttaaacgc
     1321 gcaaaccaaa ggcaaaaaac aaggcgaatt agatttagaa aaggaaatga acgagcgtac
     1381 cagcgatgcc gaaattgaac gcaaaggctg ggagcatatg gttgctgccg ccaccgtatc
     1441 ggaaaagcag ttgattggtc gcggcgtgcg ttattttcca tttgcgtttg aaggtaaaca
     1501 gccgaataaa cgcaaatttg acaacgatat gcaacatgaa ttgcgtatct tggaagaatt
     1561 gttttattac acgcacgatg agcaatcccg ctatattaca gaactgaaaa acgagttacg
     1621 aaaagacggt tatttgcctg aaaaagacga tgataaggta ttggcaacat ttaagctcaa
     1681 atctgaattt gcagataata aggattttag agagttgtta atttgggcga ataaaaaaat
     1741 ccccaaccca aacgccaaaa gcaataatgc agacagcctg caagccaatc cgcaaacgct
     1801 ttcattccaa gttcacggta atcaactgtt gcaggaaacg caatttacag ccgatgaaaa
     1861 tgatgaaaca gcccgacaaa tcggcacaca aaataatttt actcaaacca taaaaatgag
     1921 tgaaatggag cggcatattt tcaataaagc attacatatc aaagggaaaa atagtcaatc
     1981 tttattccat tttgaccgcc tgcaaagcaa actcgacatt caaaatcgca atgaattgca
     2041 aaataaattg ttgaaagact ggcagattga atttttggga ttagagcaag ataaacaggt
     2101 tcgcccggat gataaacttg caggctgcct gaaaatcttg gaaatggttg aaaaacatct
     2161 gaatgaaagt gatataccgt ttatcggtac aaaagaattt acacctaaaa aattgtggga
     2221 aattttcggc acgccaaaac aaaaatgggt caaaaaagat gatataaaaa ctgctattgc
     2281 cacgcaaaat gattggtatg tgatggataa ttttgccgga acgggtttgg aagaagcgtt
     2341 aattcaattt atttcagcgc gcttgggcga tttgaaatct caatatgacg ttcatttaat
     2401 ccgcaatgaa gaagtgttta aattgaataa ctttgccgat ggcgaaggat ttatgccgga
     2461 ctttgtttta ttgctgaaag ataaacaaaa atcttcttcc gacagcgtgg acgacttttt
     2521 gcattaccaa attttcattg aaccgaaagg cgggcattta gtggaaaatg attcgtggaa
     2581 agaagctttt ttaaaatcaa tcacagtgga atatgggagg gataagatcc tgcaaaaaaa
     2641 tacaccgcat tatcgtttga tcggtttgcc gttttttact gatcatcaga aaaatggaca
     2701 atttacagag ttattccctt taggtgcggc atcgcttgaa aaatagagta gtgcattgca
     2761 ggcagccccg ttcggcaaaa cttcctttac aaaagggcgt tttgtcagat atttaatcaa
     2821 cacattatta aaatacaacc aaattttaat gccgtccgaa ccatgtattc agacggcatc
     2881 gtatttttca gtatctaaac cgtttccctg ccccaatcct tactcctcaa aatcgaggca
     2941 tcgacatctt gaatatcgcg gtgtcccgta aacgccatcg acacatccat ttccttgtac
     3001 aaaatctcca gcgcgcgcgt tacgccttct tcgccatacg cacccaaacc atacaggaac
     3061 gcccgaccta tcatcgtgcc tttcgcaccc aaagcccacg ccttcaaaat atcctgaccg
     3121 ctgcggatac cgctgtccat ccaaacttcg atgtcgctgc cgactgcgga aacaatatcg
     3181 ggcaaggcct tgatggcgga cacagtatcg tcgagctggc ggccgccgtg gttggaaacg
     3241 accaatgcat ccgcaccgct tttcgccgcc ttttccgcgt cttcgggttc cataatgcct
     3301 ttgataatca gcttgccgcc ccacaaatct ttaatccgcg ccacgtcgtc ccagcttaag
     3361 cgcgggtcga actgttccgc cgtccacgaa gaaagtgaag acaaatcgcc gacgtttttg
     3421 gcgtgtccga cgatattgcg gaacgtgcgg cgttccgtgt tcagcatttt catgcaccat
     3481 tcgggcttgg tcgccagatt gattaaattg gcgatggtcg gtttcggcgg cgcggacagg
     3541 ccgtttttga tgtctttgtg gcgttgaccc aaaacctgca aatcggcagt caataccaat
     3601 gccgaacatt tggcatcttt cgcacgctta atcaggtttt ccataaattc gcggtcgcgc
     3661 atcacataaa gctgaaacca aaacggcgcg ctggtgttct cggcaacgtc ttcaatcgag
     3721 cagatggaca tggtggacaa cgtaaacgga ataccgaact tctccgccgc acgcgccgcc
     3781 aaaatttcgc cgtctgcgtg tgccatgccg gtaaaacccg tcggcgcaat cgccaccggc
     3841 attttcacat cccccccgat cattttggtt tcgaggctgc gtccctccat attgaccaat
     3901 accttttgtc ggaagcggat atctttgaaa tccgaagtat tctccctata agtcgtttcc
     3961 gtccacgaac ccgaatcgat gtaatcgtaa aacatacgcg gcattttgcg cttggcaacg
     4021 cggcgcaagt cttcgatgca ggtcattttg cttaaatcac gtttcatctt gtttttccct
     4081 gtttaacagc ctgatggaat atgccgtctg aaactgcttg agccttcaaa cggcatttcg
     4141 ggcaataccc aaataaatca ctaagattta gataatctat atcaatatta aaaataaatc
     4201 aaatcgtttt gaaaccgctt cccggcaaaa cgccccaacc gccgctcctc aaaaaacata
     4261 actaactgat tcaaaaaacc aaacaaataa agcaaaatca gactataccg ccatttaaac
     4321 aaacaatcgg caacagctcc cccatacttg actgaaacac tcagatattg gacaattccg
     4381 cccactataa aaaagccgac acgggcaacc accaccatga gactgaccac caaagggcgt
     4441 ttcgccgtta ccgctatgct ggatttggcg atgaacgcgc aaaccggcgc cgtcaaactc
     4501 agtgccatca gcgaacgcca aaatatatcc ctctcctatc tcgagcaatt gttcggcaaa
     4561 ctccgccgcg ccggactggt tgaaagcctg cgcgggcccg gcggcggcta catcctcgcc
     4621 gcccctcccg cacaaatcaa catcgcccaa atcatttccg ccgccgaaga ccgtctggac
     4681 gcgacccaat gcggcagcaa agccaactgc caccacggcg cgccctgcct gacgcacgac
     4741 ctttgggaga atttaaacaa aaccatcaac gactatctcg gcagcgttac cctgcaaagc
     4801 atcatcgaac agaaaaacaa cggcgacggc agccgcgtcg tccaatttac acacatccat
     4861 taaataacac ccgaaaaaga aagagcaaac catgaccgtc aaaacccccg tttacctcga
     4921 ctacgccgcc accacacccg ttgacaaacg cgttgccgaa aaaatgattc cctatctgac
     4981 tgaaaccttc ggcaaccccg cctccaacag ccacgcattc ggctggacgg cagaagaagc
     5041 cgtcgaaaaa gcccgcgccg acatcgccgc cctgattaac gccgacccca aagaaatcgt
     5101 cttcaccagc ggcgcgaccg agtccgacaa cctcgccatc aaaggtgcgg caaacttcta
     5161 caaaaccaaa ggcaaacacc tcatcaccgt caaaaccgaa cacaaagccg tgctcgacac
     5221 gatgcgcgaa ctcgaacgcc aaggctttga agttacctac ctcggcgtgc aggaaaacgg
     5281 tttgattgat ttggaagaac tcaaagccgc catccgcgac gacaccatcc tgatttccat
     5341 aatgtgggtg aacaacgaaa tcggcgtggt gcaaaacatt cccgccatcg gcgaaatctg
     5401 ccgcgaacgc aaaatcgcct tccacgtcga tgccgcccaa gcctgcggca aagtgcctgt
     5461 cgatgtcgaa gccgccaaaa tcgacttgct ctcgatgtcc gcgcacaaag tgtacggccc
     5521 caaaggcatc ggcgcgctgt acgtccgccg caaaccgcgc gtccgcctcg aagcccaaat
     5581 gcacggtggc ggtcacgagc gcggtttccg ttccggcaca ttgccgaccc atcaaatcgt
     5641 cggcatgggc gaggccttcc gcatcgccaa agaagaattg gcacaagaca cagcgcacta
     5701 cctgaaactg cgcgacatct tcctcaaagg catcgaaggc atcgaagaag tctatatcaa
     5761 cggcgacctc gaacaccgcg ccccgaacaa cctgaacgtc agcttcaact tcgtcgaagg
     5821 cgaaagcctg attatggcgg tgaaagaact cgccgtatcc agcggatccg cctgcacctc
     5881 cgcctcgctc gaacccagct acgtcctgcg cgcgcttggc cgcaacgacg aactggcgca
     5941 ctcatccctg cgcatcacct tcggccgcat gaccaccgaa gaagaagtgc aattcgcggc
     6001 agaactgatc aaatccaaaa tcggcaaact gcgcgaactg tcgccgctgt gggaaatgtt
     6061 caaagacggt attgatctga actcgattga atgggcggcg cattaagatt gatgtcaaac
     6121 aaaggctgtc tgagaaagaa taccatgaaa gttaaaatta tta
//
LOCUS       DAXGCP010000108         6123 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.109, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000108 DAXGCP010000000
VERSION     DAXGCP010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6123)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6123)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6123
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.109"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            129..440
                     /locus_tag="ACFJCW_001935"
     CDS             129..440
                     /locus_tag="ACFJCW_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HFC4151993.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHISKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRTLPYAEQKIQCRAAYEAFDDFDGGRFR
                     R"
     gene            complement(490..600)
                     /locus_tag="ACFJCW_001936"
                     /pseudo
     CDS             complement(490..600)
                     /locus_tag="ACFJCW_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(703..1470)
                     /locus_tag="ACFJCW_001937"
     CDS             complement(703..1470)
                     /locus_tag="ACFJCW_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HFC4151994.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPKSRNRAV
                     IALGKGALAALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVCETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVAGDADVAV"
     gene            complement(1558..2385)
                     /gene="mutM"
                     /locus_tag="ACFJCW_001938"
     CDS             complement(1558..2385)
                     /gene="mutM"
                     /locus_tag="ACFJCW_001938"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HFC4151995.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVILRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLIVRFQTGILLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEERHPLLEKLGPEPLSEAFCTDYLYAGLKAQKRAV
                     KLALMDNTVVVGVGNIYANESLFRAGISPHRPANRLKKKECAVLVETVKAVLQRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCLRCGGLVVKETLGQRGTFYCTNCQK"
     gene            complement(2438..3103)
                     /locus_tag="ACFJCW_001939"
     CDS             complement(2438..3103)
                     /locus_tag="ACFJCW_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HFC4151996.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFNRYVASYRFSGMCAVQVGGQWL
                     SLSEDIVCVPRDMSMSAENMALADVFADMLLLPHTLECGVPSQILSEAHRILKPSGRL
                     MLTGFNPYSLWGFCRWFDGVRLPEKRFCLPLPELKRQLADAGFDIEFGKFMVYLPPVS
                     SLGQIRFWRFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYWGGKALAAGAAR
                     VAD"
     gene            3282..5258
                     /locus_tag="ACFJCW_001940"
     CDS             3282..5258
                     /locus_tag="ACFJCW_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HFC4151997.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQVGLAIMRLNSSILD
                     LPPTKQYFQSGSLWDELRQGFRMGEVNPELVRRHESKFIASRSYFDRVVNRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDVYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAVNRARDQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPGRPLDNEAIARLAG
                     ITQSELLALNPAFNVPAFIPKNKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLHTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVSIARIQPAAAQTADITVAPLPQETVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQVVPPNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAETSPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            5326..6018
                     /locus_tag="ACFJCW_001941"
     CDS             5326..6018
                     /locus_tag="ACFJCW_001941"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HFC4151998.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIRGGYVSINGTCMDDTDADIDSS
                     YVETLDIDGEAVTVVPEPYFYILLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPTGETLCETLKNGVPLHD
                     ENETVCAADAVLENPTTLLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIECPKF"
BASE COUNT         1597 a         1933 c         1349 g         1244 t
ORIGIN      
        1 tgcatatcaa acggcaagtt ttgtcggctg aatgagtctg aaactgccga cagtttgccc
       61 gttccatcct tccatcctat actggaagga attacaaact gaaaggatcg tcatgtccgt
      121 caataaagat gcttgccata ctgttgtctg caatactggg actggtatca acaactgccg
      181 ctgccggtac gtcagaaccc gcccaccgac ataccaaaca tatcagcaag gcaaacaagc
      241 agatgctgca ccccgaatgc aggaaatatt tggaacgccg tgccgcgtgg taccgatcgc
      301 aaggcaacgt gcaggaattg cgcgaaaaca aaaaggcgcg caaagcattc cgcaccctgc
      361 cttatgcgga acagaaaatc caatgccggg cggcttatga ggctttcgat gatttcgacg
      421 gcggcaggtt ccgccgttaa tcccatataa aatatgctgt ctgaacacaa gttaagatgg
      481 cattttccat agatatagtg gattaaattt agaccggtac ggcgttgcct cgccttgccg
      541 tgctatttgt actgtctgcg gcttcgccgc cttgtcctga tttaaattta atccactata
      601 caacaaacta tccttacggc atttcttttg aggtactccc gttaccgcag ccttaaggca
      661 tccgcaaaag cgaatcatac cgctacattc cgacaaccgc tttcagacgg caacatccgc
      721 atcgcctgcg acaacggcac ggatgctttc ttcgatttta tcttttaaag cataacggtc
      781 ttcgctttcc gccgcgtccg ccacgcaaac gaaatcgact ttgatagtca gttttttcat
      841 agacacgatt cgccacaggc aagtcggcaa accgacatcg gcatacgacg gacgggccgt
      901 cctttttccc gtttcgtcat aataacgcag tgcgaccgcc aaaacctttg cccccgcatc
      961 gatggcggat tggaacagcg cagccttgaa cggcaggagc cccagtccgg aggaagttcg
     1021 cgcctcaggg aaaaaactga cgttttgacc gcgttgcaag gtttcgcaga cggcgcggtt
     1081 aatcggttcg atgtcgcgcc gcgaattgcg gttgatgaac accgttcccg cgttctgccc
     1141 catcttgccc aataccggcc agcttttgat ttcctgcttg gcgataaagc tactcggata
     1201 aaccgcgctc atcgcgaaaa tatccagcca ggacacgtgg ttggcggcaa ccaagacacc
     1261 gttcggatgt tcgggtgcgg gtctgcccac ctccaatccg atatccaaag ccgccaaagc
     1321 gcccttgccc aacgctataa ctgcccgatt gcgcgacttg gggcagccgc cgtcaatacc
     1381 gcgcaggttt ttgccggttt tgaacagcca gaccgtcaag cggcacaagc ggcgcagacg
     1441 tgtaaaaaat gaagctttat ttgaagacat gggcaattct ttcccgataa tcggtgtttg
     1501 ttgttgaaac gttcggacgg cataccgata aaatgccgtc agaaaccgtt ttccgcccta
     1561 tttctgacag ttcgtgcaat aaaacgtgcc gcgctgcccc aaagtttctt tcacaaccaa
     1621 accgccgcac cggaggcacg gctgattgtg ccgcccgtac accgtatatt cctgttgaaa
     1681 gtagccgctt ttgccgtcgc tgtccacaaa atccctcagc gtactgccgc ccgtttcaat
     1741 ggcgcgctgc aacaccgctt tgacggtttc aaccaaaacc gcgcactctt tcttttttag
     1801 gcggttggca ggacggtggg gcgaaatgcc cgccctgaac agactctcgt tggcataaat
     1861 attgcccacg ccgaccacga cggtattgtc catcagagcg agtttgaccg cgcgtttctg
     1921 cgccttcagc cccgcataca gataatccgt gcaaaatgcc tccgacaaag gctccggccc
     1981 cagtttttcc aacagcggat gacgttcttc gattccctca taccaaagta tcgcgccgaa
     2041 ctttctcgga tcgcggtaac gcatgaccgt gccgtctgaa aacacaatat cgacgtgatc
     2101 gtgtctgtcc ggcctgccga tacgtccgtc cgacggcgta aagatccgca agctgcccga
     2161 catccccaag tgaatcagca aaatccccgt ttggaaacgg acaatcagat atttggcacg
     2221 cctgccgcag gacaaaacct gccggccgga caaaatctcc cccaaatcgg gattgatctg
     2281 ccagcgcagc ttcagttggc gcaatatcac ggcttccacc gtttttcctt caatatgcgg
     2341 cgcgatgccg cgcaacgtcg tttccacttc cggcaattcc ggcataaccc ctcccgacat
     2401 ttcttctgac agatgccgtc tgaaagacgg ccgtccctta atccgcaacc cttgccgcac
     2461 ccgccgcaag ggctttgccg ccccaatacc cgtcccacgc gggcaggggc gttacgcccg
     2521 ccgccctttt gaccaaaacc aaaccgtaca ctgcggcaca ttgcggccac caacggtcgc
     2581 ccgccttttc cataaaccgc caaaagcgta tttgcccgag cgacgaaacg ggaggcagat
     2641 acaccatgaa tttcccaaat tcaatatcga aaccggcatc ggcaagctgc cttttcaact
     2701 cgggcagcgg cagacaaaac cgtttttccg gcagacggac accgtcaaac caacggcaga
     2761 atccccaaag cgaatacgga ttgaaacccg tcagcatcaa acgtccggac ggtttcaata
     2821 tccggtgcgc ttccgacagg atttgcgaag gtacgccgca ttccagcgta tgcggcaaaa
     2881 gcagcatatc cgcaaaaaca tccgccaaag ccatattctc cgccgacatc gacatatctc
     2941 gcggcacaca gacaatgtct tcagacaggc tcagccactg accgcccacc tgaaccgcac
     3001 acattcccga aaaacggtat gacgccacat accgattaaa gaagtcctgt tccaattttg
     3061 caacataccg ccccatcgcc gtatcttcaa accatgcatc catattgcgt ccgtttcaaa
     3121 cagattgcct gccgatattt tattccaaac aggatttctg tcaaaaaaca catcggccgc
     3181 ccatttccga atccgcataa agttcctgta aaacttgacg ctttttcagt caaacagtac
     3241 catcggacga taaaatatgt ttattccgcc gagtataaat catgtccaaa ctcaaaacca
     3301 tcgccctgac cgcatcaggt ctgtccgttt gtccgggttt cctatatgcc caaaacacct
     3361 catcacacca agtcggttta gcgattatgc ggttaaactc ttcaatactc gacctgccac
     3421 cgacaaaaca atatttccaa tccggcagcc tgtgggacga gctgcgccaa ggcttccgga
     3481 tgggcgaagt caatcccgaa ctggtacgcc gccacgaaag caaattcatc gcaagccgca
     3541 gctatttcga cagggtcgtc aaccggagcc gaccctatat gtaccatatc gccaacgaag
     3601 tcaaaaaacg caatatgccc gccgaagccg ccctgcttcc cttcatcgaa agcgcgttcg
     3661 tcaccaaagc caaatcacac gtcggcgcat cgggcctgtg gcagttcatg cccgctaccg
     3721 gcaggcatta cggcttggaa aaaacaccgg tttacgacgg caggcacgac gtttacgcag
     3781 ccaccgatgc cgcactcaac tatctgcaat atctctatgg actgttcggc gactggccgc
     3841 tcgcctttgc cgcctacaac tggggtgaag gcaacgtcgg acgcgccgtc aaccgcgccc
     3901 gcgaccaagg gctcgaaccg acctacgaaa acctgcgtat gcccaacgaa acgcgcaact
     3961 atgtccccaa gctgctcgcc gtgcgcaaca ttattgccac cccccaatct ttcggcatga
     4021 atatcagcga catagacaac aaaccctatt ttcaggcagt cgaaccgggc cgtccgctcg
     4081 acaacgaagc catcgcccgg cttgccggca tcacgcaaag cgagctgctc gccctgaatc
     4141 ctgcattcaa cgtccccgcg ttcatcccca aaaacaaacg caaactgctg cttcctgtcg
     4201 cgtccgtcca aaccttccaa agcaactacc tcaacgccgc acccgacagc ctgttttcat
     4261 gggaagtcta tacgcctgcc gccaaaacca gcctgtccga catctcgacg gcaaccggca
     4321 tgagcattgc cgacatcaaa cgcctcaaca acctgaacgg caaccttgtc aacgcaggac
     4381 gcagcatcct tgtcgccaag aacggcaaga cccttcatac ggcatcggaa tccgtcgttt
     4441 ccatcgacat cgacaatacg cccgacacct accgttccaa tatgccggca ggcacggtga
     4501 acgtcagcat tgcccgaatc caacccgccg ccgcacagac agcggacatt accgtcgcac
     4561 ctttgccgca agaaaccgtc cgtacggaac ccgatcccct tgtccgcatt gccgaacccg
     4621 cccttgcgac agccgcagcg caacctcaaa ccgaaaaaca gactgccatg ccgtctgaaa
     4681 cccaaaccgc aacactcgcg caggtcgtcc ccccaaacga catgcaggcg gcagacgaac
     4741 tcatgcagct tgttgcccga aacaacctgc gccggcaggc tgaagaaacc atctccgccg
     4801 tcatcggcac gcctgacaca gttgccgaac acaacatttc ctcatctccg caacataccg
     4861 ttgccgccga cggcaaacgc cgggcacgtt tggaaacgcg cgtagccaaa gctgccgacg
     4921 gcgaagccga aacctccccg ctccatgcca gcatccaccg cgttgtagaa ggcgacaccc
     4981 tgttcaacat tgccaaacgc tacaacgtca gcgtagccga cctgattgtc gccaacaaca
     5041 tcaaaggcaa caccatccaa aaaggacagg tactccgcct ggcgcaggca gcccctgccc
     5101 aaacccgtat tgaaaaagta tcctacaccg cgcgcaaagg cgacaccttc aaaagtatcg
     5161 ccgcgcgctt caatatccat atcgacgaca tccgccggct caatcccaac ctgaacacca
     5221 tcaatccggg acagagggtc aaactgattg gaagctgatt cggatacggc acatgacagg
     5281 actttctcag tcctgtcttt ttcatcccac atttcccata ccatcatgaa actcatcaaa
     5341 tacctgcaat atcaaggcat aggaagccgc aagcagtgcc aatggctgat taggggcggc
     5401 tacgtctcca tcaacggaac ctgcatggac gacaccgatg cagacatcga ttcctcatac
     5461 gtcgaaacgt tggatattga cggggaagca gtaaccgtcg ttcccgaacc ctatttctac
     5521 atcctgctca acaagcctga agattacgaa acttcgcaca aaccgaaaca ctaccgcagc
     5581 gtattcagtc tgttccccga caatatgcgg aacatcgata tgcaggcggt cggcaggctg
     5641 gatgcggata cgaccggcgt attgctgatt accaacgacg gcaaactgaa ccacaacctg
     5701 acttcgccga gcagaaaaat tcccaagcta tacgaagtaa cgctcaaaca ccctacagga
     5761 gaaacgctct gcgaaacttt gaaaaacggc gtgccgctcc acgacgaaaa cgaaaccgtt
     5821 tgtgccgccg atgccgtttt ggaaaatccg accaccctgc tgctgaccat taccgaagga
     5881 aaataccacc aagtcaaacg catggttgcc gccgccggca accgcgtgca acaccttcac
     5941 cgccggcgat tcgcacattt ggaaacagaa aacctcaaac ccggggaatg gaaatttatc
     6001 gaatgtccga aattctgaaa caaaattcca taatttccct atattcaacc atatgcttat
     6061 taaataagca gttttacaaa aattaactca aaaaacagtt agtttacaat ataatccgct
     6121 tgt
//
LOCUS       DAXGCP010000109         5964 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.110, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000109 DAXGCP010000000
VERSION     DAXGCP010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5964
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.110"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            88..360
                     /locus_tag="ACFJCW_001942"
     CDS             88..360
                     /locus_tag="ACFJCW_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4151999.1"
                     /translation="MKKTSKYLIYTAAFTSFCFAFQENRSEAKQPDITLSASLCEQFN
                     MLNAKDMDTEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGVVYE"
     gene            568..2496
                     /gene="dnaK"
                     /locus_tag="ACFJCW_001943"
     CDS             568..2496
                     /gene="dnaK"
                     /locus_tag="ACFJCW_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HFC4152000.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSIIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKADNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKIAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDYIIDEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLIARSIEPCRTALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVKDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKTAIDAKAEALGTASQKLGEMVYAQAQAEAQAGEGAQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            2719..4639
                     /locus_tag="ACFJCW_001944"
                     /pseudo
     CDS             2719..4639
                     /locus_tag="ACFJCW_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712496.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            4696..5673
                     /locus_tag="ACFJCW_001945"
     CDS             4696..5673
                     /locus_tag="ACFJCW_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HFC4152001.1"
                     /translation="MDMKRRDFLKMTAALAAAGVSPSLLTAGKEQFTVYGAPAMPSVT
                     IAVTALQGKLAKQADVSLKIWRSPDQLRAGVASGQFKVMMSPSNVGVNLRNQGQKVGM
                     VNILTNGITQLVCKGSAIASPQDLVGKKILVPFKNDMPDIVLQALLKKLKIDAHKVSI
                     TYAATPPEAVGLFPSKGYHAVILPEPMATASLLKGKTIGINVVHGFDLVKAWGQAFGT
                     KPLIPMAGIIANEEYFHAHKAQFDIFHQDLKNALNWILANRQNAAKIGKNYLPAPEPA
                     LVMGLDGARLTVSKGSEVKNEILKFYEILMQFNPELLGGKLPDNGFFLA"
BASE COUNT         1772 a         1605 c         1377 g         1210 t
ORIGIN      
        1 tttaaattat gatttttctt atccaataca taatttttca gattttccat aggtttaatc
       61 ccgaattgac agaaaaagga tagaaaaatg aagaaaacca gcaaatatct tatctatact
      121 gcggcattta cctcattctg ctttgccttc caagaaaacc gttctgaagc caaacagccc
      181 gacatcactt tatccgcatc cctgtgcgaa caattcaaca tgctgaacgc caaagatatg
      241 gatacagaac aagtctccct ttccaaagaa tgcgacatca tcgagtcttc acacgactgg
      301 gaaaaagagt acggcaactt gaacgaacag gaaatgctcg ccggcgtcgt ctatgaataa
      361 acctgcctgc catttgaaac attatgcttg aatgcattgg agccaaatgt attaaatcaa
      421 atataaaacc aatatattca taaagttata tacttatggc catgctgtag cttgaaacag
      481 cccgccgccc gccctattta cagcccatcg ggacaaaatg ttccaacata tttctcaaaa
      541 taagcaaaat caaataggag tatccacatg gcaaaagtaa tcggtatcga cttaggtaca
      601 accaactctt gtttggccat ttccgaaaac ggtcaaacca aagtcatcga aaacgcagaa
      661 ggcgcacgca ccacgccgtc cattatcgct tatttggacg gcggcgaaat cctcgtcggc
      721 gcgcctgcca aacgccaagc ggtaaccaac gccaaaaaca ctatttacgc cgccaaacgt
      781 ttgatcggtc acaaatttga agacaaagaa gtccaacgcg acatcgaatc tatgcctttc
      841 gaaatcatca aagccgacaa cggcgacgca tgggtaaaag cacaaggcaa agagctgtct
      901 cctcctcaaa tttccgcaga agtcctgcgt aaaatgaaag aagccgccga agcttacttg
      961 ggcgaaaaag taaccgaagc cgtgattacc gtccctgcct acttcaacga cagccaacgt
     1021 caagccacca aagacgcagg ccgtatcgcc ggtttggacg taaaacgcat catcaacgag
     1081 ccgaccgcag ccgctttggc attcggtatg gacaaaggcg acaacaaaga ccgcaaaata
     1141 gccgtatatg acttgggcgg cggtaccttc gatatttcca tcatcgaaat cgccaacctc
     1201 gacggcgaca aacaatttga agtattggct accaacggcg atactttctt gggcggtgaa
     1261 gacttcgacc aacgcttgat tgactacatc attgacgagt ttaaaaaaga acaaggcatt
     1321 gatttgaaac aagacgtaat ggctctgcaa cgtctgaaag aagctgccga aaaagccaaa
     1381 atcgaattgt ccagcggcca gcaaaccgaa atcaacctgc cgtacattac catggacgca
     1441 accggcccga aacacttggc aatgaaaatt acccgcgcca aattcgagag cctggttgaa
     1501 gacctgattg cccgctctat cgagccttgc cgcaccgcat tgaaagatgc cggcttgagc
     1561 accggcgaca tcgacgacgt gattttggtc ggcggtcagt cccgtatgcc gaaagtacaa
     1621 gaagccgtta aagacttctt cggcaaagaa ccgcgcaaag acgtgaaccc tgacgaagcc
     1681 gttgccgtag gtgcagcgat tcaaggcgaa gtattgagcg gcggccgcag cgacgtattg
     1741 ctgctggacg taacccctct gtccttgggt atcgaaacca tgggtggtgt gatgaccaag
     1801 ctgattcaaa agaacactac tattccgact aaagcgtctc aagtgttctc tactgccgaa
     1861 gacaaccaaa gcgcagtaac catccacgta ctgcaaggcg aacgcgaacg cgcttctgcc
     1921 aacaaatctt taggtcaatt caacttgggc gacatcgcac ccgcaccacg cggtatgccg
     1981 caaattgaag ttactttcga catcgacgcc aatggtatct tgcacgtttc cgccaaagac
     2041 aaaggcactg gcaaagcggc caacattacc atccaaggtt cttcaggttt gagcgaagaa
     2101 gaaatcgaac gcatggtgaa agatgccgaa gccaatgccg aggaagataa aaagctgact
     2161 gaattggtcg cttcccgcaa ccaagccgaa gccctgattc actccgtgaa aaaatctttg
     2221 gcggactacg gcgacaaact cgacgctgcc gagaaagaaa aaatcgaagc cgcgctgaaa
     2281 gaagccgaag aagccgtgaa aggcgacgac aaaaccgcca tcgatgccaa agccgaagca
     2341 ctgggcacag ccagccaaaa actgggcgaa atggtttacg cgcaagcgca agccgaagcc
     2401 caagccggcg agggcgcaca agccaatgct tctgcaaaga aagacgatga tgtcgtagat
     2461 gccgactttg aagaagtaaa agacgacaaa aaataattga tgccgtctga aaaaaacgcg
     2521 aaccattcgg ttcgcgtttt tttcaattga gataaaagac aatagcatga cagagattcc
     2581 aaattcatct accgtgatat tcccaagccc aagttccaac tgttgcatcg gttatctgga
     2641 aatttttcat atcattttct tatttactta aattttttaa taagataata aataataatt
     2701 attatcatga gctaagaaat gaaactaaat actctcacat gggctttgat gaccgttttt
     2761 tccgttgcgc catcttgggc agaacaaccg gcaaatactg aagaaataca acccgtcaaa
     2821 accttctccc cgcccaaacc gattgcaccg accgccgcac aaggctattt ccccgaaaac
     2881 caattcgacc gctccgaccg cagcgattat tactttgtta ccgaaaacat agaccaagcc
     2941 ttccgtccgc tgaaggcaaa cagcagtttt tacggcaaaa gcttttacaa ctccgttacc
     3001 gcgcaagcac tcggggcgaa ggtatacggc gtagccaacc tcaatcgcac caaggcaaac
     3061 ggctacaaag atggcggtgg gcgcgacact gattggaaat acagccgctt caatcaggct
     3121 ttggtactcg gtttcgtgcc gtctgaaaat caagaatacc gcctcactta tctgcacgac
     3181 gacatcaaca acgaccgcca gccgcaggtc gtcaacgacg cattggacac cgaacgccac
     3241 atctccaaac tcaacgtgcg ttggggcaat gccgatttga gcaatacggt cagcgcggaa
     3301 gcaggcgtca tcaaactcaa acgccatgcc gacaattact ccttgcgacc aaacaacacg
     3361 ccgcagcaag tgttcgtaga acttgaccgc aaagtgtatg atttctcgct caaacacgat
     3421 gcggatttcg gcaaattcca caacacggca gccgtcagct accgcaacga cagccaaaac
     3481 ggcgaacgca acacccacac tgccatgtgc gatttcctca acggctaccg tttcgccgat
     3541 gtgcacatcg accgctggtg cattgccgat accttatctt acaagtttga cgaccgacac
     3601 aaactgggct tgggcttaag ctacgaactc aacgaagcgg acattcgcaa aaatacggca
     3661 cagcctgaaa acccaataaa acccggtttc cccttcgcct catcacaaca aatctggaaa
     3721 acccattacg gctacgactt caacggcaaa gtgcgccgtc atgctttgtc gggcgaactc
     3781 aaatacgatt tcacgccgtc tgaaacgcaa aaatacagcg tttccctcgc gcatttggaa
     3841 cgcatcggcg acaacaccga acgcttcaac tcgcttgctg ccatcgtgca aaaccgtatg
     3901 agcggcatgc tgatgaacca aaatccagcc gccgccattg caggcaatcc ccctgctgaa
     3961 aactgaaaaa cacaaccgca tcaggctcac cgccgacagc cgcaacgact actacaacgg
     4021 ctacatgaac tcgctcgcag gcgcgggctg gaacgtgggc ggcacgcttg tggcggacaa
     4081 agtcaaagac ctgattattt ttgaccgcgc acacggacaa agcggcacag cttccaaaga
     4141 cggcggcatc atcacacgca acgtggacgc acgattgttt accgcgcagg cctacgcgcg
     4201 ttacaacttc aatccgcatt gggcggcagg catcaaagcc gcctacaact acggacacaa
     4261 cgaaaccgac ggcaggccgc cctatcaaat ccgtccgttt gaagccgccg tccaagccga
     4321 ctacaaaaac tactttgccc acggcagcta caacatcggc gcggcaacac gctttgtcgc
     4381 caaacaaacg cgcggtgatt ttgatatggc aagcggtctg ggcatagaca aacgcgaagc
     4441 cgccaaaggc tttaccgttg ccgacgtgta cgcaggcgta aacatcaaag acaaatacgg
     4501 cttgcgcttg ggcgtgaaca acgtattcaa caaaaaatac gtcgaataca tcagcggcga
     4561 ccacgtcctc gccctatccc ccagcgtagt gtatgcaccg ggcaggacat attggttgag
     4621 tttgcatgcg gcattttaaa accatgccgt ctgaaaaata cctgcattgg cttattaaga
     4681 attaggagat aaaaaatgga tatgaaaaga cgcgatttct taaaaatgac cgccgcgctg
     4741 gcagccgcag gcgtttcgcc ttctctgctt actgccggta aagagcaatt taccgtgtac
     4801 ggcgcaccgg caatgcccag cgttaccatt gccgtaacgg cgttgcaagg taaactggcg
     4861 aaacaggcgg acgtgtcgct gaaaatctgg cgttcgcccg accaactgcg cgcgggcgtg
     4921 gcaagcgggc aatttaaagt gatgatgagt ccgagcaatg tcggcgtaaa cctgcgcaac
     4981 caagggcaga aagtcggcat ggtgaatatt ttgaccaacg gcatcacgca gttggtctgc
     5041 aaaggcagcg cgattgcctc gccgcaggat ttggtcggca aaaaaatcct cgtgccgttt
     5101 aaaaacgata tgcccgacat cgtgctgcaa gccttgttga aaaaactgaa aatcgacgca
     5161 cacaaagtca gcattaccta cgctgccaca ccgcccgaag cagtcggact atttccaagt
     5221 aaaggttacc atgccgtcat cctgcccgaa ccgatggcaa ccgccagcct actgaaaggc
     5281 aaaaccatag gtataaacgt cgtgcacggt tttgatttgg taaaagcatg ggggcaggcg
     5341 tttggcacca aaccgctgat tccgatggca ggtatcatcg ccaacgaaga atatttccac
     5401 gcacacaagg cgcagttcga catcttccat caagatttga aaaacgcgct caactggata
     5461 ttggccaacc gccaaaacgc ggcgaaaatc ggcaaaaact acctacccgc ccccgaaccc
     5521 gccctagtca tgggcttgga cggcgcacgg ctgacggtaa gcaaaggcag cgaagtgaaa
     5581 aacgagattt tgaagtttta cgaaatcctg atgcagttca acccggaact tttgggcggc
     5641 aagctgccgg ataacgggtt cttcttggct taaagggaaa gaggccgtct gaaaagggta
     5701 gggtggttgt gaatacctga tttatcattt ttcagacggc ctattaaggc attgtcagcg
     5761 gcgtgggtcg gattcttgaa tccgacattt cggctaaacg gggctgtcgg atacaagtat
     5821 ccgacctact cttttcagac ggcctatcag ataatagttc gaacagtaca caaagagccg
     5881 tcggattgcc tgaaatgttg ggtcatgacc caacctacgc ttactgggga aacgggatcg
     5941 aagtgtgagg tatgtggcgg ggtt
//
LOCUS       DAXGCP010000110         5781 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.111, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000110 DAXGCP010000000
VERSION     DAXGCP010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5781
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.111"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..426
                     /locus_tag="ACFJCW_001946"
     CDS             <1..426
                     /locus_tag="ACFJCW_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152002.1"
                     /translation="IKMNETDLPKLLSVINRFTDIDKNWSCVLLFWIQRASGYLEMMT
                     LDDDENTATFLIEKLEKLLEPLPIDIDNTTFAEALADDFEILFLMAQYGSEYWNSLEE
                     SFEEFCIRHTTLPNQLIADIPHAKKEKVTMWLKSLLKSS"
     gene            423..2975
                     /gene="mobH"
                     /locus_tag="ACFJCW_001947"
     CDS             423..2975
                     /gene="mobH"
                     /locus_tag="ACFJCW_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobH family relaxase"
                     /protein_id="HFC4152003.1"
                     /translation="MKTSLLTIASSLMLVSGSMLYLINTRKSTDSVSHNDEVAHINQN
                     IVNDRFRILNAHELIQVLDLSPQISGIKMNLGLSDENWSKDALPFLEKYIAFVQRLPA
                     SESHHHAGDGGLVRHTLDVAALALVASTSQSWPPNAKTEEIAKKTAVWRYGIMCAALL
                     HDVGKTVTGFQVELFDSAISLEKLLWLPDTGSMAESGKLYYRVEFPDAKSAYSTHAEI
                     AWTFFQALVPSHVRQWLATTDSNLMITLRNYLSGKKDGSPLEQLIKNADMTSVSRDLR
                     SGSRQRFSTAKRKPFIETIMETLKEMLSDRGVHFSIATTAGGDLFRKGDRIYLMSKNV
                     PDYIRQYLRKNQHPAAGSFPADNQRIFDTLFEYRAVIPPENDPHRAINHIEVEFTRMD
                     GEKVRNIFSVLCFNAKTLYPDGDYPTEFLGNLSEVSAKKEIPDVVVSEDKVSTQIQGA
                     EDNPVTMTKDKMDFLSIQPVTAEQPPLPEKNQTETANSAFDNSMNTAAPAENKSSESE
                     KAKEPGYGTIDNLIENFNLIEADSEQTESTKSEAETAENAVNLVQENIRVEVKTETVD
                     KPRAEVKETETDKAPKTIKSGTKASRKKLAGLFADNRKPIGKTAEPDAQIKTTETVTH
                     QIDSEAVSLPESESAQNGMRELEQLRLREPTSSPRPVQVMDDSEGLDSLASGVKNMTE
                     LEAIVSERNLKKQSETESTEIVEDSVKAKHMEARDRGMQFLRWLADGLGDGSIAVNRS
                     GATVHFIEQGMLLVTPAVFRDYAGGVFNKSDTESLGPLTQKGFEALRLHARTKKSSLH
                     RVLTTNGSNRRLFYCYLIPEHNIKHIIQPGSRPQNNTDIKLDESDLLVMEQK"
     gene            2972..5014
                     /gene="traD"
                     /locus_tag="ACFJCW_001948"
     CDS             2972..5014
                     /gene="traD"
                     /locus_tag="ACFJCW_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV conjugative transfer system coupling
                     protein TraD"
                     /protein_id="HFC4152004.1"
                     /translation="MSAHFPENVYRSPYEWISVAAYSTTAVSVAHLPVPPTIAYGSLA
                     IFSLVSVKRALSALRIMRFRKNIRKLPYYALTADEIPSSDKALFLGKGFRWTQTHTQR
                     LFMVRQPENDGLRNPSKLYKAARKHEIETMGTDWISRITRKSAWWNPVAPLPPVGGSP
                     ELHGIEIEEDDIWEDLGERVGHKVVLGTTRVGKTRLCETMIVQDIRRGDVTIAFDPKG
                     DADLMTRMYVESQKSNRPFYMFHLGFPEYSCRYNPIGDYGRITEVATRIANQLPSEGQ
                     SAAFRDFVWRFVNVLTKTMEGLSIKPSYENIYKSAANVDELAGDYFKKILDKHHPGWE
                     KDFDNFDMPESEAKSAVKTGRNLDTMKLGSFLKAKKHNEPLIDALGGILSNDRSYFEK
                     LVSSLYPLLEKLTTGEVAKLISPDTEDLSDPRIIMDWRKVMESNAVVYIGLDSLSDAE
                     VAAAVGNAMFADLTSLAGQIYKFGHGVGQSGKTQKRKVSIHADEFNELIGDEFIPLLN
                     KAGGAGYQVTVYTQTWKDVEAKIGFPAKAGQIGGNLNTMIMLRVKTVETAEMLTNQLP
                     EVKIMTSTLVSRAGDVAFPDSHEDFSSGNEDRIGAETVPMLTPADLTQLPKGQAFALI
                     EGGQLYKIRLPLPKKDKQEEIPAHIGEMAADMREVYRLSRPSAEENAFTEGSSYAV"
     gene            5004..5699
                     /locus_tag="ACFJCW_001949"
     CDS             5004..5699
                     /locus_tag="ACFJCW_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4400 domain-containing protein"
                     /protein_id="HFC4152005.1"
                     /translation="MPSNTSAWYMNSLPLKFLFLPFKAAYTLFLIVLLIFGSSVLTQN
                     YFGTGNLLEDEIKWSESVGHDAFPGKEVGDTINLQIARLSYKGLKTVFFDLTLVNESL
                     KAKSEADFGYKFKNYLVPRMKYLQQFDTTLKVISLRLGNLALIVGISVIFAIPVLIDG
                     LVMRAIRQENASRESAGIYHRAKYWRTGIIWLGCMIYMCVPISIPPYLLYLPLVAAIW
                     MIFMQAKYLKKYL"
BASE COUNT         1764 a         1197 c         1289 g         1531 t
ORIGIN      
        1 atcaaaatga atgaaacaga tcttcccaag cttcttagtg tcataaatcg gtttacggat
       61 atcgataaaa actggtcttg cgtgttgttg ttctggatac agcgtgctag cggttatctg
      121 gaaatgatga cgctggatga cgatgaaaat acggcaacct tccttatcga aaaactagag
      181 aaactactag agccactacc gatagatatt gataacacga cttttgcaga agcacttgcc
      241 gatgactttg aaatcttatt tctaatggcc caatacggtt ctgaatactg gaattcactt
      301 gaagaaagct ttgaggaatt ttgtattaga catactacgc tacctaatca attgattgct
      361 gatattccac atgcaaaaaa ggaaaaagtc accatgtggc taaaatcttt gcttaaatca
      421 tcatgaaaac aagccttctc actattgcat cctcactaat gcttgtcagc ggctcaatgc
      481 tatacctgat aaatacgaga aaaagtacag attccgtgtc acataatgat gaggttgccc
      541 atatcaatca gaacatagta aatgaccggt ttcgcatttt aaacgcgcat gaactgattc
      601 aggtgctcga cttaagccct caaatatccg gtattaagat gaacttaggg ttatcggatg
      661 aaaactggag taaggatgcc cttccctttt tggaaaaata tatagccttt gttcaaaggc
      721 ttcccgccag tgagtctcat caccatgcag gtgatggtgg tttagtccgc catacactcg
      781 atgtggctgc actggctctt gtggcatcta catcgcaatc atggccccca aatgccaaaa
      841 ccgaggaaat agcgaagaaa actgccgttt ggcgttatgg aatcatgtgt gccgccctgc
      901 ttcacgacgt tggtaaaact gtgacgggat ttcaggttga actgtttgat tcggctatca
      961 gtctcgaaaa attattatgg ttgcctgata caggctccat ggctgaaagt ggcaagcttt
     1021 attatcgtgt cgaatttcct gatgcaaagt ctgcttacag tacacatgcc gaaatcgcct
     1081 ggacattctt tcaagctttg gttccttcac atgtcagaca atggcttgcc acaacggatt
     1141 cgaatttaat gattactttg agaaattatc tgagtgggaa aaaggatggc agtcctcttg
     1201 agcagttaat aaaaaatgcg gatatgacct cagtttcaag ggatttacga agcggcagcc
     1261 gtcaacgctt ctcaaccgcc aagcgtaaac cattcattga aaccattatg gaaacattga
     1321 aggagatgtt atccgataga ggagtccatt tcagcatcgc aacaactgcc ggtggtgacc
     1381 tgttccgtaa gggtgatcgc atctatttga tgtcaaaaaa cgtacctgac tacatccggc
     1441 agtatttgag gaaaaatcaa catcctgctg caggctcatt tccggctgac aaccaaagga
     1501 tatttgacac attattcgag taccgtgccg tcattccgcc ggaaaacgat cctcacaggg
     1561 caattaacca tatagaggtt gagtttaccc gtatggacgg tgaaaaggtc cgtaatatct
     1621 tcagtgtact ttgtttcaat gccaaaaccc tgtatccgga cggagattat ccgactgagt
     1681 tcttaggtaa tctttcagaa gtttccgcca agaaggaaat accggatgtt gtagtatcag
     1741 aggataaagt gtcaactcag atacaaggtg ccgaagataa cccagtcact atgaccaagg
     1801 acaaaatgga cttcctgtct atccaaccgg tgacagcaga acaacctccc ctacctgaaa
     1861 aaaatcaaac tgagacagct aactcggctt ttgacaacag tatgaatact gctgctccag
     1921 cggaaaataa atctagcgag tcagagaaag ctaaagaacc gggttacggc acaattgata
     1981 atttaattga aaactttaac ctgatagaag ctgattcaga acaaacagaa tcaaccaaat
     2041 cagaagccga gacagcagaa aatgccgtta acctggttca agaaaatata agagtagaag
     2101 ttaaaactga gacagtggac aaacctcgcg ctgaggttaa agaaactgag acagataaag
     2161 caccaaaaac aattaaatca ggaaccaaag caagccgtaa gaaacttgcc ggccttttcg
     2221 cagacaatcg taaacctatt ggaaaaacag ccgaacccga tgcacagatt aaaacaactg
     2281 agacagtaac tcatcaaata gattctgaag cagtttcatt gcctgaatct gaatcagcac
     2341 aaaacggtat gcgtgaactg gagcagctaa gactaagaga acctacatct agtccacgcc
     2401 cggttcaagt catggatgac tccgaaggtt tagatagcct tgcaagcggg gtaaaaaata
     2461 tgaccgaact cgaagccata gtttctgaac gtaatttgaa aaagcaatca gaaacagagt
     2521 cgaccgaaat agtcgaggat tcagtcaaag ccaaacatat ggaggccaga gaccgtggaa
     2581 tgcagttttt acgatggctg gcagatggat taggagacgg cagcatagca gtcaatagaa
     2641 gtggtgcaac agtccacttt attgaacagg ggatgctttt ggttacgcca gccgtatttc
     2701 gagattacgc cggcggcgtg ttcaataaat ctgatacgga aagtctaggc cctcttacac
     2761 aaaaaggctt tgaggctttg aggttgcatg caagaacgaa aaaaagctca ttgcataggg
     2821 ttctgactac aaacggtagc aatcgcagac tcttctattg ctaccttatc cctgaacata
     2881 atatcaaaca tatcatacag ccaggttcaa gacctcagaa taataccgat attaaattag
     2941 atgaatccga cttattagta atggaacaaa aatgagtgcc cacttccctg aaaacgttta
     3001 tcgatcaccc tatgaatgga tcagtgtagc cgcatactcc accacagcgg tttcagtagc
     3061 acatttgccc gtacctccga caattgctta tggcagttta gctatttttt cgttggtttc
     3121 agtcaaacgt gcgttatcag cattacgcat tatgcgtttc cgtaaaaata ttcggaagtt
     3181 accctattat gcccttactg ccgatgaaat tccttcttct gataaagctc tttttcttgg
     3241 gaaaggtttt agatggacac agacacatac ccaacgtctt tttatggttc gccagcctga
     3301 gaacgacgga cttcgtaacc cctcaaaact ctataaggca gcgcgaaaac atgagattga
     3361 gacaatgggt acagactgga tttcccgcat aactcggaaa tcggcatggt ggaatccggt
     3421 tgctccctta cctccggtcg gaggttctcc tgaattacat ggcattgaaa ttgaggaaga
     3481 tgatatttgg gaagatttgg gggagcgtgt tggccacaag gttgtattgg gcacaacccg
     3541 cgttggtaaa acccgattat gcgaaaccat gattgttcag gatattcggc ggggggatgt
     3601 tacgatcgca tttgatccaa agggtgacgc tgacctgatg actagaatgt atgtcgaatc
     3661 gcaaaaatca aacaggccgt tttatatgtt ccatttgggt ttccccgagt acagttgccg
     3721 gtacaaccct atcggggatt atggccgtat taccgaggtg gcgacaagga ttgcaaacca
     3781 actgccttct gaaggtcagt ctgctgcttt ccgagatttt gtatggcgtt tcgtcaacgt
     3841 tttaacgaaa accatggaag gtttatccat taaaccaagc tatgaaaata tctataagtc
     3901 tgctgcaaat gtagatgaac ttgcagggga ttactttaaa aagatattag ataaacacca
     3961 ccctggttgg gagaaagact tcgacaattt tgatatgccc gagtctgaag caaaaagcgc
     4021 agtcaaaact gggcgcaact tggacacaat gaagctcggt tctttcttga aggccaaaaa
     4081 gcataacgaa cctcttattg acgcattggg tggtattttg tccaatgaca gatcctattt
     4141 tgagaagcta gtcagctccc tgtatccatt gctggaaaaa ctgacgactg gcgaagttgc
     4201 caagcttatc agcccggata cagaggattt gtcagatcca agaatcatta tggactggcg
     4261 caaagtcatg gaatcgaatg ccgtcgtcta tattggattg gattccctat ctgatgccga
     4321 agttgcagca gccgttggta atgcgatgtt tgctgactta acctctcttg cgggtcagat
     4381 ctataaattc ggccatgggg ttggacagag tggaaaaacc cagaaaagaa aagtctcaat
     4441 tcatgcagac gaattcaatg aattaatcgg tgacgaattc attccgttat tgaataaggc
     4501 cggtggtgcc ggctaccaag tgacggttta tacacaaacc tggaaagacg tagaagccaa
     4561 aattggtttc cctgctaaag caggtcaaat tggcggcaac ttgaatacga tgattatgct
     4621 tagggtgaaa actgtcgaaa cagcagagat gctgacgaat cagttgccgg aagtcaaaat
     4681 tatgaccagc actctagtct caagggctgg tgatgttgcc ttccctgata gtcacgaaga
     4741 ttttagcagt ggaaacgaag acaggattgg tgctgagaca gttcctatgc tgacacccgc
     4801 cgatttaacc caattaccca aaggtcaagc attcgcgctt attgaaggtg gccagctata
     4861 taaaattcga ctccctctac ccaaaaagga caagcaggag gaaatccctg cgcatattgg
     4921 agaaatggcg gctgatatgc gcgaagttta cagactaagc cggccttcgg ctgaagaaaa
     4981 cgcatttacg gagggaagta gttatgccgt ctaatacaag cgcatggtac atgaattcat
     5041 tgcctttaaa gttcttattt ctcccgttta aagctgctta taccttattc ttaattgtgc
     5101 tgcttatctt tggtagttcg gtgttgacac aaaactattt tggtaccggt aatctcttgg
     5161 aagatgaaat caaatggtct gagtctgttg gccatgatgc gtttccagga aaagaggttg
     5221 gcgatactat aaatctgcaa attgccagac ttagttacaa ggggctgaaa accgtatttt
     5281 ttgacctgac attagtcaat gaatcactaa aagccaagtc agaagccgat tttggttaca
     5341 aatttaaaaa ttatttagtc ccccgtatga aatatctaca gcaattcgat actacgttga
     5401 aggttatttc cttacgtttg ggaaatttgg cattaatcgt gggtatctca gtaatctttg
     5461 caattccggt tttgatagat ggtttagtaa tgagagccat tagacaggaa aatgcctcgc
     5521 gagagagtgc aggcatttat caccgtgcaa aatactggag aacagggatt atttggttgg
     5581 gttgcatgat ttatatgtgt gtgccaatat caataccgcc ctacttgctc tatttacctc
     5641 tggtagcagc aatttggatg attttcatgc aagctaaata tcttaagaaa tatctctagg
     5701 cttccagtag aatctaaata gtgctttttt agttcattaa acgggggctt aatgctttaa
     5761 ctgacggtac agaaatctcg a
//
LOCUS       DAXGCP010000111         5513 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.112, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000111 DAXGCP010000000
VERSION     DAXGCP010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5513
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.112"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..388
                     /locus_tag="ACFJCW_001950"
     CDS             <1..388
                     /locus_tag="ACFJCW_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4152006.1"
                     /translation="AVVFGIPKRNGRAYTVAADDAEPETLLPAVKKKIMPDGIVYADS
                     PGSRGKSDAGGFTRCRINRSKEFADRRNHINGIGNFWNQAKRALRKYNGIDRKPFPPL
                     LRECEFRLNSGTPSRQLKILRDRCGI"
     gene            514..1335
                     /locus_tag="ACFJCW_001951"
     CDS             514..1335
                     /locus_tag="ACFJCW_001951"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HFC4152007.1"
                     /translation="MSSPRQVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATVSGQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYKDKLFGLTIQPERLQAIRQER
                     RPNSAYARIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(1421..2083)
                     /locus_tag="ACFJCW_001952"
     CDS             complement(1421..2083)
                     /locus_tag="ACFJCW_001952"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HFC4152008.1"
                     /translation="MIQAVLFDLDGTLADTALDLGGALNTQLARHGLPEKSMDEIRTQ
                     ASHGAAGLLKLGANITPEHPDYTAWRTEYLEEYDSRYAQDTTLFDGVNELIAELDRRG
                     IKWGIITNKPMRFTDKLVPKLGFAVPPATVVSGDTCGEPKPSIKPMLHACGKIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTGSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(2121..2948)
                     /locus_tag="ACFJCW_001953"
     CDS             complement(2121..2948)
                     /locus_tag="ACFJCW_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HFC4152009.1"
                     /translation="MKPDIYALLERALLSGDPDEKGRLTDEAFAAVQNADGAEANAPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTTEGHAAMLHAITHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRERLRAFGFDYGDFEAHNHLWDMAYKTAYDPLLRL
                     ALVPRVLEARGLDVTPGIRAKVEQRGDSATCGVLDIIYRDEVGHVAIGNRWYQHLCRE
                     RGLEPVALFRSLIARYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKHAV"
     gene            3331..3954
                     /gene="lolA"
                     /locus_tag="ACFJCW_001954"
     CDS             3331..3954
                     /gene="lolA"
                     /locus_tag="ACFJCW_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HFC4152010.1"
                     /translation="MMKPHNLFQFLAVCSLTVAVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTLPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVRATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            4227..5366
                     /locus_tag="ACFJCW_001955"
     CDS             4227..5366
                     /locus_tag="ACFJCW_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HFC4152011.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAEQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKMRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTRQVQKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPTKELMEKSFIVSPKSAESVKLGVKLWQGLKAGK"
BASE COUNT         1268 a         1509 c         1539 g         1197 t
ORIGIN      
        1 agcggttgtc ttcggcattc cgaaacgcaa cgggcgggcc tataccgttg ccgcggacga
       61 tgccgagcct gaaacgttgc tccctgccgt caaaaagaaa atcatgccgg acggtattgt
      121 ttatgccgat agcccgggca gccgcggcaa gtcggacgcg ggcggtttta cccgttgccg
      181 catcaaccgt tccaaggaat ttgcagaccg tcggaaccac attaacggca ttgggaactt
      241 ttggaatcag gcaaaacgcg ccttgcggaa atacaacgga atcgatcgta aacctttccc
      301 gccgttgttg agggaatgcg aatttcgact taactccggc acaccgtccc ggcagctaaa
      361 aatcctgcgg gatcggtgtg gaatttaggg ataatctagt acagcccctt gttttttggg
      421 gtgtaatccg aggtaggggc ggctggggtg cttctccctt gtctgccgct gctgttatga
      481 tgatattttt attctgtatt taaggagggg gtgatgagca gtccgcgcca agtgttttat
      541 atttccgacc gcaccggtct gactgccgag aatatcggcg aggctttgct gaaccagttt
      601 ggcaatctgt cgttcaaacg ccatacgcat ccgtttgtcg atacgccgga aaaggcgcgc
      661 gcggtggtgg agaaggtcaa tcggagccgg caggaaaacg gtcagcgtcc gattgcgttt
      721 gtcagtgtgg ttgatgacga aatccgccgg attattaaag gggcggatgc ttttcagatt
      781 aatttctttg agactttttt gggactgttg gagaaggaac tcaataccga agcaacggta
      841 tccgggcagg ggcatcacag tatcggcaat acgaagcgtt acgatgcgcg tatggaggcg
      901 gtcaattttt ctttgaacca tgatgacggg gtcagcgata agaaccttca ggaggcggat
      961 gtgattctga tgggcgtgtc ccgttcgggc aaaacgccga cctgcctgta tctggcgttg
     1021 caatacggta tccgtgcggc aaactatccg ctgattcccg acgatttgga atcggccgat
     1081 ctgccgcgta tggtcaagcc gtataaagac aaactgttcg ggttgactat ccagccggaa
     1141 cgtttgcagg ccatccgtca ggaacgccgc ccgaattcgg cttatgcgcg catcgacacc
     1201 tgccgcagcg aagtggcgga cgcgcagagt atgttcagac ggcatggcat tccgtttgcg
     1261 aatacgacgg acaagtcggt tgaggaactg gcggtacaca tccttcaggc gtgcaagctc
     1321 aaacgcaggt tttgacgggc tttgattcgg tttgaaggtg gaaatgccgt ctgaaatcag
     1381 gtttcagacg gcagttttat gtttgtgggg cggatatttt tcagggctgt attttgtcca
     1441 gacattcgag cagatcgagc ggcgtgcgga tgtggaaatc cgcctgccat gagccggtat
     1501 cgtcttcatc ggaaatatag ccccattcgg cgaggacggt tttcataccg gcgttgcgtc
     1561 cggcttggat gtcgcgttcc gcgtcgccga cgtagagggt gtgttgcggg tcggcgtgga
     1621 tttttccgca ggcgtgcagc atgggtttga tgctgggttt gggttcgccg caggtgtcgc
     1681 cgctgacgac ggtggcgggc ggaacggcga atccgagttt gggaacgagt ttgtcggtga
     1741 agcgcatggg tttgttggtg atgatgcccc atttgatgcc gcgtctgtcg agttcggcga
     1801 tgagttcgtt cacgccgtcg aagagagtgg tgtcttgggc gtagcggctg tcgtattcct
     1861 ccagatattc ggtgcgccat gcggtatagt cggggtgttc gggcgtgatg ttcgcgccga
     1921 gtttgagcaa tcctgccgcg ccgtggctgg cttgggtgcg gatttcgtcc atgctttttt
     1981 cgggcagtcc gtggcgggcg agttgggtgt tgagtgcgcc gccgaggtct agggcggtgt
     2041 cggcgagcgt gccgtcgagg tcgaacaata cggcttgtat catgtgtttt ccttttttat
     2101 aaagtgcggg acgaaaggtt tcagacggca tgtttatttt gtttcaaacc ctgctcgaaa
     2161 tcttccaaca tatccaattc gaagcggctg aagcccgctt tttcccgcgc ttcgatgttc
     2221 acatagccgc ggaagataaa catatcgtaa cgggcaatca gactgcggaa cagggcgaca
     2281 ggttccaaac cgcgttcgcg gcagaggtgt tgataccacc ggttgccgat ggcgacgtgt
     2341 cccacttcgt cgcggtaaat gatgtccaac acgccgcagg ttgccgaatc gccgcgctgc
     2401 tccaccttcg cgcgtatccc cggcgtaacg tccagtccgc gcgcttccaa cacgcgcggc
     2461 accaacgcca gacgcaacaa aggatcgtag gcggttttgt atgccatatc ccataaatga
     2521 ttgtgtgcct cgaaatcgcc gtaatcgaag ccgaaagcac gcagcctttc gcgcatcagg
     2581 cggaagtggt acacctcctc cttcgccact ttcacccagt cgcggacaaa ctgaaacggc
     2641 agcgtgcgga aacggtatgc cgcgtccaaa gccagattga cggcgttgaa ctcgatatgc
     2701 gtaatcgcgt gcagcatagc cgcatggcct tcggttgtgt tcattttgcg cggggtcagt
     2761 tgcgagggcg cgaccaaaac cggcttgtcc ggccgtcccg cgcgggggaa gtccgccggc
     2821 ggcgcgtttg cctccgcccc gtccgcattt tgaacggcgg caaacgcctc atccgtcagc
     2881 cgtccttttt catcggggtc gcccgaaagc agggcgcgtt ccagcaaagc ataaatatcg
     2941 ggtttcatct caagtccgcc gtgttcggaa aacgaatatt atagcgttta aaaaaaacaa
     3001 gatgaggcat ataatctccg cgattcggca ttccgcgccc aaaccgtcaa atatagtgga
     3061 ttaacaaaaa ccagtacggc gttgccccgc cttgccgtac tatgttgtac tgtctgcggc
     3121 ttcgtcgcct tgtcctgatt tttgttaatc cactataacg cggcatacaa ttgaaagggc
     3181 agcgtggcgt gcctgctttt tccgagcggt caaaaaaatc agccctcgga aaacgcggtt
     3241 tgcaaaatgc aaaccgcccg taacgccgcc cgtatgattg ttttgccgcg ccgatacttt
     3301 gcgccacacc catcccgaca aggaaaaata atgatgaaac cgcacaacct gttccaattc
     3361 ctcgccgttt gctccctgac cgtcgccgtc gcttccgcac aggcgggcgc ggtggacgcg
     3421 ctcaagcaat tcaacaacga tgccgacggt atcagcggca gcttcaccca aaccgtccaa
     3481 agcaaaaaga aaacccaaac cgcgcacggc acgttcaaaa tcctgcgccc gggcctcttc
     3541 aaatgggaat acactttgcc ctacaaacag actattgtcg gcgacggtca aaccgtttgg
     3601 ctctacgatg ttgatttggc acaagtgacc aagtcgtccc aagaccaggc catcggcggc
     3661 agccccgccg ccatcctgtc gaacaaaacc gccctcgaaa gcagttacac gctgaaagag
     3721 gacggttcgt ccaacggcat cgattatgtg cgggcaacgc ccaaacgcaa caacgccggc
     3781 taccaataca tccgcatcgg cttcaaaggc ggcaacctcg ccgccatgca gcttaaagac
     3841 agcttcggca accaaacctc catcagtttc ggcggtttga ataccaatcc ccaactctcg
     3901 cgcggcgcgt tcaagtttac cccgcccaaa ggcgtggacg tgttgagcaa ctgatgccgg
     3961 ccgccccgat gccgtctgaa cgccgccgag gcttcagacg gcattttcac gcaggcggaa
     4021 caatgtcccg cattatcggc cgatcgggca acggaacggc aaatccgtga aaattaacgg
     4081 ttgcgccccg gctgtttttg ccgtttaatg caaaccttgc tgcaccaagg gccaagaaag
     4141 ccgaccggcc gcccccacag cttccgatgc aggcggcccg tccgtccctg caatgttttt
     4201 tatttttgaa cgaaaggtcg aaaaccatga aaaaaacact ggtggcggcg gcaatcctga
     4261 gccttgcctt gactgcgtgc ggcggcggaa gcgataccgc cgcccaaacc ccctccgcca
     4321 agcccgaagc cgaacaatcg ggcaaactca acatctacaa ctggtcggat tatgtcgatc
     4381 ccgaaaccgt cgccgccttt gaaaaagaaa ccggcattaa gatgcgttcc gactattacg
     4441 acagcaacga aacactggag gcaaaagtcc tgaccggcaa atccggctac gacctgaccg
     4501 cgccgtccat cgccaacgtc ggccggcaaa tcaaagcggg cgcgtatcag aaaatcgaca
     4561 aggcgcaaat cccccattac ggcaacatcg ataaagattt gctgaaaatg atggaagccg
     4621 tcgatccggg caacgaatac gccgtcccct atttctgggg catcaacacc ttggcaatca
     4681 acacgcggca ggtgcaaaag gcattgggta cggacaagct gcccgaaaac gagtgggatt
     4741 tggtgttcaa acccgaatac accgccaaac tcaaatcctg cggcatcagc tatttcgaca
     4801 gcgcaatcga acagattccc ttggcgttgc actatttggg caaagacccc aacagtgaaa
     4861 atcccgaaga catcaaagcc gccgtcgata tgatgaaagc cgtccgaggc gacgtgaaac
     4921 gcttcagctc ttccggctat atcgacgata tggcggcggg caacctgtgt gccgccatcg
     4981 gttacggcgg cgatttgaac attgccaaaa cccgtgccga agaagccgca aacggcgtgg
     5041 aaatcaaagt attgaccccg aaaaccggcg taggcgtgtg ggtggattcc tttatgattc
     5101 cgcgcgacgc gcaaaacgtt gccaacgccc accgctatat cgactacacg ctccggcccg
     5161 aggtggctgc gaaaaacggc agcttcgtta cctacgcgcc cgccagccgt cccgcgcgcg
     5221 agctgatgga tgaaaaatac acctccgacg catcgatttt cccgaccaaa gaactgatgg
     5281 aaaaaagttt catcgtatca cccaaatccg cagaatccgt caaactgggc gtgaagctgt
     5341 ggcaagggct caaagcgggc aaataaccgg aatccctgcc gtctgaaacc tttcgggcgg
     5401 caggaaacgg cgtgtccgca ttaagtcagg attaggatta tttagaaaga tgagatggat
     5461 atgaatttaa gtattgtcgt tcctatttat aatgtcgaaa gttatttgga agc
//
LOCUS       DAXGCP010000112         5436 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.113, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000112 DAXGCP010000000
VERSION     DAXGCP010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5436
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.113"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            283..432
                     /locus_tag="ACFJCW_001956"
     CDS             283..432
                     /locus_tag="ACFJCW_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152012.1"
                     /translation="MNAEGFCEKQTACRPDGRRNAGDRADLKAFEFAGRELANYREML
                     KRYAV"
     gene            462..3509
                     /locus_tag="ACFJCW_001957"
     CDS             462..3509
                     /locus_tag="ACFJCW_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HFC4152013.1"
                     /translation="MSDLEAKVRITVENHTKQGFDSAAADADKAAEKMRSSGDNAAKG
                     FKAAIDSMHETMRNLHADVKAGFEAAGNQAQQASEKVRAEVGKIGSGLSGLTKLLAGL
                     ATADFAKSVLDTADAMQSINSQVRQVTSSETEYLAVQQQLLDTANRTRASLESTANLY
                     VSTSRALKDYGYTQQEILKFTEAANNAMTIGGVGAQQQVAALTQLSQALGSGVLQGDE
                     FKSISEAAPILLDTIAEYMGKSRDEMKKLGSEGKLTADVIFKAISGASEKFGEQAAKM
                     PVTMGQALTVFSNNWQSMVSKLLNDSGTMSGIAAVIKLIADNLNLVVPIVAGFAVAVA
                     AAVAPTLALNLALLANPFGIIAVAIGTVVGLIAKFGDEIDVFGGGWSNLSDVIRAVWQ
                     IITETVGEAVGTVKSWFDGLTGRLNEGAGGWPSLFGRVMSVISSAIGAYVNVYINIFA
                     TGWMLIKEAANDMPQFFANLGKAIGNVFISAIERMINKAVGMINSMIDFANKAASMAG
                     ISGIGKLNKVRMGRMDDGGLGERIHDSLTKDRAGAMANAVRERAADIHEADALKGRGG
                     GGHAKTARKKPGANQGGGKGGKSRSGGPGAAKDPMQAWEGEIKARKLAHREMQRETLA
                     HQEWDLAREAEYWRAKLATVDANGKTGVKIREKILTLEDQLSKQSTEAKMNQAAEWEK
                     LDKHKLEMEKDAADQALADGRISQLERLDLEIEFENRRYQIAYDALQERIALAEQDPA
                     YSQAAIGKLKAQMGELGRGHERTQAKNEGKRENQRRKDAPNVMEMLQDGGRNVWQEAQ
                     QQMGQAFTAMLARAQNFRQAMNGFFKSMGQTFIQEMVTKPLTGLMRRMVEESAIYKMI
                     FGTKETLETAAAAKTAATKATETTAVVSSNAVQAASGAAASQAHIPYVGPILAVAAMA
                     AMMSAVMGLMGGGGGSQTTTTTTRIPSAAGGWDIPAGINPLTQLHENEMVLPAEHAQT
                     IREMADQQGGGSTVIINSTGGDFIHKNDLAKLLKQMKRDFKFV"
     gene            complement(3569..4048)
                     /locus_tag="ACFJCW_001958"
     CDS             complement(3569..4048)
                     /locus_tag="ACFJCW_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HFC4152014.1"
                     /translation="MTDNLIQIATPILTVIGVFVAAYGIMRNTENAKKRATIDMIMAE
                     RNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAILTVLNQREFVCAGVLGG
                     ALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQEFEAVARKWKKKPLKTK"
     gene            complement(4389..5378)
                     /locus_tag="ACFJCW_001959"
     CDS             complement(4389..5378)
                     /locus_tag="ACFJCW_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC4152015.1"
                     /translation="MATITQRNGKWRVQIRMKGVSRSATFERASDAKAWAARIESQIM
                     DGIQGNAPRNTIFADLIRRYLSEVTPSKRGAREESYRIGRALKTPLAKVRLADLRPQD
                     FADWRDQRLQEVSPTSVGRELTTLSAVCEHAMKEWGLLRENPVRKISKPKKSRARTRR
                     PTEQEIADICAALLYRPNEKPKMAVQRVAVAVLFAIETAMRAGEICGLKWADVNMRRR
                     IAHLPITKNGDSRDVPLSLRAAELIEQLRGIDDTWVFSLDAKSLDVLFRRARDNCGIQ
                     GLHFHDTRREALTRLSKKVPVEVLAKISGHRDLRILLNVYYRPDMADIAKMLD"
BASE COUNT         1319 a         1345 c         1572 g         1200 t
ORIGIN      
        1 gtcggttccg ggttggcggc cgcatcgggg gaagtgtcgg cattcccccc gattttttac
       61 atatcgggcg gacgcggcaa atttttgccg ttttgtttgc gcgaaggggg cgttatacaa
      121 aattatcagg cgcaccaata atgggcggaa atgaaaatgc cgtaccctat gggcaggctt
      181 cgcactctga aaggttcagg cggcatttgt attccctgcg cgtcaaaccg ccttcgtgta
      241 aagcggttgc aaaaaagcct tttattttga cagggtgcag agatgaacgc cgaaggattt
      301 tgtgaaaaac aaaccgcctg ccggccggac gggcgccgaa atgcgggcga tcgtgccgat
      361 ttgaaggcct ttgagtttgc cggacgggaa ttggcgaatt atcgggaaat gttgaaacgt
      421 tatgccgtct gaaaagacgg cttttttatt tggggctgta aatgagcgat ttggaagcca
      481 aagtcaggat aacggtagaa aaccatacga agcagggttt tgattcggcc gccgccgatg
      541 ctgataaggc ggcggaaaag atgcgcagca gcggcgataa tgccgcaaag ggctttaaag
      601 ctgcaatcga cagtatgcac gagaccatgc gcaatttgca cgccgatgtg aaagcgggat
      661 ttgaagcggc gggcaatcag gcgcaacagg cgtctgaaaa ggttagggcc gaagtgggta
      721 aaatcggctc aggcttatcg gggctgacca aactgctggc aggattagca accgcagact
      781 tcgccaaatc ggtgcttgat accgccgatg cgatgcagtc gataaacagc caagtccgac
      841 aagtcacgtc gtctgaaacg gagtatctgg ccgtgcagca gcagcttctc gatacggcaa
      901 accgtacccg tgcatcgctt gaatcaacgg caaacctgta cgtttccaca agccgcgcgt
      961 tgaaagacta cggctacacg cagcaggaaa ttttaaaatt caccgaggcg gccaacaacg
     1021 cgatgaccat cggcggcgtt ggcgcgcaac aacaggtcgc cgcgctgacg cagttatcgc
     1081 aggctttggg cagcggcgta ttgcagggcg atgaatttaa atccatttcc gaagccgcac
     1141 ctattttgct ggataccatt gcggaatata tgggcaaatc ccgcgacgaa atgaaaaagc
     1201 tgggcagcga agggaaattg acggcggatg tgattttcaa agccatttcc ggcgcgtcgg
     1261 agaagttcgg ggagcaggcg gccaaaatgc ccgtgacgat ggggcaggct ttgacggtgt
     1321 tctcgaacaa ctggcaaagc atggtttcaa aactgctgaa cgacagcggc acaatgtcgg
     1381 ggattgccgc cgttattaaa ctgattgccg ataacctgaa tttggtcgtc cctatcgtcg
     1441 caggttttgc cgttgccgtt gccgccgccg ttgcaccgac actggctttg aatcttgcac
     1501 tgctggcaaa cccgttcggg attattgccg tcgcaatcgg cacggttgtc gggctgattg
     1561 cgaaattcgg cgatgaaatc gatgttttcg gcggcggctg gtcgaatctt tccgatgtga
     1621 ttcgggcggt ttggcaaatc atcacggaaa ccgtcgggga agcggtggga accgtcaaat
     1681 cgtggtttga cgggctgaca ggccggctga acgagggcgc gggcggctgg ccgtcgttgt
     1741 tcgggcgcgt gatgagcgtc atctcaagcg caatcggcgc gtatgtgaac gtttatatca
     1801 acatattcgc aaccggctgg atgctgatta aagaagccgc aaacgatatg ccgcaattct
     1861 tcgccaatct cggcaaggcc ataggcaacg tgtttatttc cgcgatcgaa cggatgataa
     1921 acaaagcggt aggcatgatt aacagcatga ttgactttgc caacaaagcc gcgtcgatgg
     1981 ccgggatatc gggcattgga aagctgaaca aggttcggat ggggcggatg gacgacggcg
     2041 ggcttggcga gcgtattcat gacagcttga cgaaagaccg cgccggcgca atggcaaatg
     2101 ccgtccgcga acgggccgcc gatattcacg aagccgatgc cctcaaggga cgcggcggcg
     2161 gaggacacgc caaaaccgcc cggaaaaagc cgggcgcaaa tcagggcggc ggcaaagggg
     2221 gcaaatcccg ttcgggcggt ccgggcgcgg ccaaagaccc gatgcaggct tgggaagggg
     2281 aaatcaaagc ccgaaaactc gcacaccgcg aaatgcagcg cgaaacgctc gcacaccaag
     2341 aatgggattt ggcgcgtgag gcggaatatt ggcgggcgaa gctggcaacg gtggacgcca
     2401 acggcaaaac gggcgtaaaa atccgcgaaa aaatcctgac gcttgaagac caattatcga
     2461 agcagtcaac cgaagccaaa atgaatcagg cggccgaatg ggagaaattg gacaagcaca
     2521 agctggagat ggagaaagac gcggcagacc aagccctggc agacggacgt atttcgcaac
     2581 tcgaacgcct ggacttggaa atcgagtttg aaaaccgccg ttaccaaatc gcctatgacg
     2641 cattgcagga acgcatcgca cttgccgaac aagacccggc atacagtcag gcggcaatcg
     2701 gcaagctcaa ggcccaaatg ggcgaattgg ggcgggggca cgaacggacg caggcgaaga
     2761 acgagggcaa acgcgaaaac caacgccgca aagacgcgcc caacgtcatg gaaatgctgc
     2821 aagacggcgg caggaacgtt tggcaggaag cacagcagca gatggggcag gcgttcaccg
     2881 ccatgctggc gagggcgcag aacttcaggc aggcgatgaa cggtttcttc aaaagtatgg
     2941 ggcaaacctt tattcaggaa atggttacga aacctttgac gggcttgatg cggcgcatgg
     3001 ttgaggaatc ggccatttac aagatgattt tcggaactaa ggaaacgctg gagacagcgg
     3061 cggcagccaa gacggcggca actaaggcaa ccgagacaac ggcggttgtc agtagtaatg
     3121 ctgttcaagc ggcttcaggc gcggcggctt cccaggcgca tatcccatat gtcggcccga
     3181 ttcttgccgt tgcggctatg gcggcgatga tgtcggcagt gatggggttg atgggcggcg
     3241 gcggcggttc tcaaacgacc acaaccacga cgcgcattcc ctcggcggca ggcggctggg
     3301 acatcccggc aggcatcaac ccgctgaccc aactgcacga aaacgagatg gtcttacccg
     3361 cagaacacgc gcaaaccatc cgtgaaatgg cggatcagca gggaggcggc agcaccgtca
     3421 tcatcaattc gacaggcggc gacttcatcc ataaaaacga tttggcgaag ctgttgaaac
     3481 agatgaaacg ggactttaaa tttgtctgag aaaatgccgt ccgaaaggtt cggacggcct
     3541 atgttgcggc gtacgtcaag ctattaagct atttggtttt cagaggcttt ttcttccatt
     3601 tccgggctac ggcttcaaat tcttgaaagg ccgtcggcgc gctcctgata cggcgtattt
     3661 caaaaatgaa gctgcttagg ttgtcccagt cgcgtaacag catggagtat tcgaaatctt
     3721 tatacatttt ctcgtgcagc gccccgccca atacgcccgc acagacaaat tcgcgctggt
     3781 ttaaaactgt cagtatggct tcacggtctt tcttcttgtc cggggtatct gatgtatagg
     3841 tggcgagtat gcatccgtct gtttttgcca gcccgtttac tatggttatg gcttcttgaa
     3901 gggcggcatt gttacgttcg gccatgatca tgtcgatggt ggcgcgcttt ttggcgtttt
     3961 ccgtattcct catgatgccg taagcggcaa caaaaacgcc gataacagtc aatatcggcg
     4021 ttgctatctg tattaggttg tcagtcattg ccgtcccagc cgtccgaaag gcggaaatca
     4081 cggctttccg aataaatatg ccccattgtc atccccttaa gctgatgttg agaataaatc
     4141 cttgcgtcgg aatatacggc attgcctgac tattttcaag attccgcacc ccgcggaccg
     4201 gactatacaa aaaaaccgcc ttcgtgtaaa gcggttgaag agagcctttc aataaaatgc
     4261 cgtccgaagg gctttcggac ggcatttttt atagattctt ttttaatgaa cctttgaaac
     4321 cgaagataat taattttcct ctttattttc aatacgcagt gtgccctatg tttttaaata
     4381 aaaatatttt aatccaacat ttttgcaata tccgccatgt cggggcggta gtaaacattg
     4441 agtaaaatcc ttaaatcccg atgcccgctg atttttgcca agacctccac aggcactttt
     4501 tttgataggc gcgtgagggc ttcgcggcgg gtgtcgtgaa aatgcaggcc ttgtatgccg
     4561 caattatccc gcgctcgcct gaataataca tcaaggcttt tggcatccag gctaaacacc
     4621 catgtgtcat caattccgcg cagttgctct attagttcgg cggctcgcaa ggataatggc
     4681 acgtcacggc tgtcgccgtt tttagttatt gggaggtggg caatacgacg ccgcatattc
     4741 acatctgccc attttaggcc gcagatttcg cctgcccgca tggcggtttc gatggcaaat
     4801 aggacggcaa cggcaacccg ttgcaccgcc attttcggtt tctcattagg ccggtatagg
     4861 agggcggcgc aaatatcggc aatttcctgc tcggttggcc gtcttgtcct tgcccggctt
     4921 tttttcggct tgctgatttt gcgtacaggg ttttcgcgaa gaagtcccca ctctttcatg
     4981 gcgtgttcgc agacggcgga taaagtggtt aattcgcgtc cgacgctggt gggggatacc
     5041 tcctgcaacc gttgatctcg ccaatcggcg aagtcttgag ggcgcaggtc ggcaagccgc
     5101 acctttgcca aaggtgtttt tagtgcgcgt ccaatgcggt atgattcttc ccgtgcgccc
     5161 cgctttgatg gtgtaacctc ggataaatac cgccggataa ggtcggcaaa gatagtattt
     5221 cgcggggcat tgccttggat gccgtccata atttgcgact ctattcgcgc cgcccacgcc
     5281 ttcgcgtctg atgcccgctc aaatgtggcg gaacgggaaa cgcctttcat acggatttgt
     5341 acgcgccatt tgccgttacg ttgagtgatg gttgccatat ttattcgggt gcaattcggg
     5401 tgcaaatata atagagcaaa acagatataa agcggg
//
LOCUS       DAXGCP010000113         5383 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.114, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000113 DAXGCP010000000
VERSION     DAXGCP010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5383
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.114"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..541
                     /locus_tag="ACFJCW_001960"
     CDS             <1..541
                     /locus_tag="ACFJCW_001960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HFC4152016.1"
                     /translation="PQPRETAALRAKYGFADHETVFLFPSTGHTRKGLELLADFFEQT
                     ELPVKLAVAGSPLPRPMKNVVGLGFCTDMPELYRAADFTIMASLYEPFGLVGVESALC
                     GTRVVLSENMACTEVMNEEAGFFFSRQNPETLAQAVARAVSLKKQGGHRLSDPMRALN
                     YNPSLSHHIDRLTDMLASV"
     gene            complement(608..2260)
                     /locus_tag="ACFJCW_001961"
     CDS             complement(608..2260)
                     /locus_tag="ACFJCW_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LTA synthase family protein"
                     /protein_id="HFC4152017.1"
                     /translation="MVAYAFLFLFVTAVVLLIVRSHYRWTYFFASALFVFLAGGMLML
                     TAQWQRALNFASVWFVVLILFHRLKIHYYKQPLLISDFLLIADWRNWETLFHYKEAVI
                     GMAGLLALAAYAVFGWSGADSLGMPWRWAGAVLFAAAFVSVRHFSKHPGAVKTWLDSL
                     PDDGRDVFLNLPMSCRAVFFQVPVFEGDGEAFARQMPSETRPYGMSDEKPDIVVTLME
                     STLDPHCFDFAAAKIPDLKMFGRQEDTVFSSPLRVHTFGGATWKSEFAFLAGVPSTDF
                     GALASGVFYSVVPHLQTGFVRNLREHGYFCVALSPFTKGNYNAKAAYDHFGFNLMFQP
                     QDLGYPAPMGKNLWHISSEEMMQYARMILEKRHPDLENVRQPMFVYVLTMKEHGPYRT
                     DTDNVFDLDAPDLNAKTVSALNDYIGRIADLDKAVESFDRYLHERGKPFVFGYFGDHQ
                     VPFEGVSVRKKWDYAQPDYVTQFAVRSNIAGGFVQRQDFLDLAFAGGVLMEAAGLEAK
                     DGFMRANMAMRGLCGGGLEDCPNRELVGNYRNYLYDVLKIAR"
     gene            2403..2966
                     /gene="gmhB"
                     /locus_tag="ACFJCW_001962"
     CDS             2403..2966
                     /gene="gmhB"
                     /locus_tag="ACFJCW_001962"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HFC4152018.1"
                     /translation="MKLIILDRDGVINRDRDDFVKSVDEWIPVEGSMDAVAFLTQAGC
                     TVAVATNQSGIGRKYFTVQDLTEMHAKMHRLIRQAGGEIDGIWFCPHTGADGCNCRKP
                     KPGMIEDILERFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PGHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            2996..3739
                     /locus_tag="ACFJCW_001963"
     CDS             2996..3739
                     /locus_tag="ACFJCW_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HFC4152019.1"
                     /translation="MLIIRNLIYWLILCSSLIFLFPFMLLASPFRDGAHKMARVWVGI
                     LNWSLKHIVGLKYRIIGAEHIPDRPSVICAKHQSGWETLALQEIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVIICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAEMPSETA"
     gene            3736..4425
                     /locus_tag="ACFJCW_001964"
     CDS             3736..4425
                     /locus_tag="ACFJCW_001964"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HFC4152020.1"
                     /translation="MTSLIHTLSDGIELTVEINRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPHNTANRLPEHIWFHGRQLALTAHQDTQILLMPS
                     EILVPEGAPEKQLALLRDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQRI
                     KIHGRELFALG"
     gene            5010..>5383
                     /locus_tag="ACFJCW_001965"
     CDS             5010..>5383
                     /locus_tag="ACFJCW_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
                     /protein_id="HFC4152021.1"
                     /translation="MASTGVNKEIKGKKLSLWAKRQDGSVKWFCGQPVQRADNADNDA
                     VTAAAAGKDTTNIDTKHLPSTCRDKSSAVCTKHHAPISNTSKKSAVAGYYPNHGKWPE
                     DNTSAGVASPADKIKGKYVQKV"
BASE COUNT         1336 a         1744 c         1289 g         1014 t
ORIGIN      
        1 tccacaacct agagaaactg ccgccctgcg cgccaaatac ggttttgccg accatgaaac
       61 cgttttccta ttcccatcga ccggccacac gcgcaaaggc ctggaactgc tcgccgactt
      121 tttcgaacaa accgaactgc ccgtcaagct cgccgttgcc ggttcaccgc ttccccgccc
      181 gatgaaaaac gtcgtcggac tgggcttctg caccgatatg cccgaactct accgcgccgc
      241 cgactttacc attatggcat ccctgtacga acccttcggg ctggtcggtg tcgaatccgc
      301 cctatgcggc acacgcgtcg tcctctccga aaacatggca tgtacagagg tcatgaacga
      361 agaagccgga ttctttttct cacgacaaaa cccggaaacc ctcgcgcaag ccgttgcccg
      421 ggccgtcagc cttaaaaaac agggcggaca ccgcctgtcc gacccgatgc gggcgctgaa
      481 ctacaacccg tccctgtcgc accacatcga ccgactgacc gacatgctgg catccgtata
      541 acaaaatgcc gtctgaacgg gttttcagac ggcattttcg caaccgttgc agccgtgcgg
      601 caaaaagcta acgggcaatt ttcaaaacgt cgtacagata gttgcggtaa tttccgacca
      661 actcccggtt cgggcagtct tccaaccctc cgccgcacaa accgcgcatc gccatattcg
      721 cacgcatgaa gccgtctttg gcttccaaac cagccgcctc catcagtacg ccgcctgcaa
      781 aggcaaggtc gaggaaatcc tgccgctgta cgaatccgcc ggcaatattg ctcctgacgg
      841 caaactgcgt tacataatcc ggctgagcgt aatcccattt cttcctgacg gacacgccct
      901 caaacggtac ctgatgatcg ccgaaataac cgaaaacaaa gggtttgccg cgttcgtgca
      961 gataacggtc gaaactttcc accgctttgt ccaaatcggc aatgcgcccg atgtagtcgt
     1021 taagcgcgga tacggttttc gcattcaaat cgggcgcatc caaatcaaac acattgtcgg
     1081 tatccgtccg atacggcccg tgctccttca tggtcagcac atatacgaac atcggctgcc
     1141 gcacgttttc caaatcggga tggcgttttt cgagaatcat ccgcgcatac tgcatcattt
     1201 cctcactgga aatgtgccac aggtttttgc ccatcggcgc gggatagccc aaatcttgcg
     1261 gctggaacat cagattaaag ccgaaatggt catatgctgc cttggcattg tagttgccct
     1321 tggtaaacgg cgagagcgcc acgcaaaaat aaccgtgttc gcgcaggttg cggacaaaac
     1381 cggtctgcaa atgcggtacg accgaataaa acacgccgct tgccaacgcg ccgaaatctg
     1441 tggacggaac acccgccaaa aacgcaaatt cggacttcca cgttgcgccg ccgaaagtat
     1501 gcacgcgcaa aggtgaggaa aatacagtat cttcctgccg tccgaacatt ttcaaatcgg
     1561 gaattttggc ggcggcaaaa tcgaaacagt gcggatcgag cgtcgattcc atcagggtaa
     1621 cgacaatatc gggcttttca tccgacatgc cgtacggccg ggtttcagac ggcatctgcc
     1681 tggcaaacgc ttccccgtcg ccctcgaaca cgggtacttg gaaaaacacc gcccgacagg
     1741 acatcggcag gttcaaaaac acgtcgcgcc cgtcgtccgg cagcgagtcc agccacgtct
     1801 ttaccgcgcc ggggtgcttg gaaaaatgcc gcaccgacac gaacgccgcc gcaaacagaa
     1861 ccgcgcccgc ccaacgccac ggcataccca aagaatccgc accgctccag ccgaaaaccg
     1921 catatgccgc caaagccagc agccccgcca taccgataac cgcttcctta taatgaaaca
     1981 gcgtttccca attccgccag tcggcaatca gcaaaaagtc ggaaatcaac agcggctgtt
     2041 tgtaataatg gattttcagc ctgtggaaca gtatcagcac cacaaaccag accgaagcga
     2101 aattcaaggc gcgctgccac tgcgccgtca acatcagcat accgcccgcc aaaaagacaa
     2161 acagcgccga cgcgaaaaaa tacgtccagc ggtagtgcga cctgacaatc agcagcacca
     2221 ccgccgttac aaacaaaaat aggaaagcat aggcaaccat cccgccccac tcctcaaaac
     2281 ggcatacctg tgccgttgcg aattattatc gaaagcatgc attataatgc agcacaggcg
     2341 catttccacc gatatttcag tataatgcca tccccgaacc cgcccaaccc aaaggaaccg
     2401 tgatgaaact catcattctc gaccgcgacg gcgtcatcaa ccgggaccgc gacgacttcg
     2461 tcaaatccgt tgacgagtgg atacctgtcg aaggcagcat ggatgcggtg gcattcctga
     2521 cgcaggcagg ctgcaccgtt gccgtcgcca ccaaccaatc cggcatcggc cgcaaatatt
     2581 ttaccgttca agacctcacc gaaatgcatg ccaaaatgca ccgcctcatc cgtcaggcgg
     2641 gcggggaaat cgacggcatc tggttctgcc cgcataccgg cgccgacggc tgcaactgcc
     2701 gcaagcccaa accgggcatg attgaagaca tcctcgaacg cttcaacgcc caagcttcgg
     2761 aaacttggct ggtcggcgac agcctgcgcg atttgcaggc aatcgatgcc gtcggcggaa
     2821 aacccgcgct ggttctgacc ggaaaaggca aaaaaacgct ctcccaacac ggacacgaat
     2881 tacccggaca cacacaggtt ttcgataccc tgctcgattt ctcacaatac atcatgcagg
     2941 aaaacgccgc accgcaagcc gactgaacat accgcatttc cgacaaggca aaaccatgct
     3001 catcatccgc aacctgattt actggctgat actctgttcc agcctgattt tcctctttcc
     3061 ctttatgctg ctcgcctcgc ctttccggga cggggcgcac aagatggcgc gggtctgggt
     3121 cggcatcctc aactggtcgc tcaaacacat cgtcgggctc aaataccgca tcatcggcgc
     3181 ggaacacatt ccggaccgcc cctccgtcat ctgcgccaaa caccaaagcg gctgggaaac
     3241 gctcgcgctc caagagattt ttccgccgca ggtttacgtt gccaagcgcg agttgttcaa
     3301 aatccccttt ttcggctggg gcttgaaact ggtcaaaacc ataggcatag accgcaacaa
     3361 ccgccgcgaa gccaacgaac agctcataaa acagggtttg gcgcgcaaaa acgaaggtta
     3421 ttggattacc attttccccg aaggcacgcg ccttgcgccc ggaaaacgcg gcaaatacaa
     3481 actcggcggc gcgcgcatgg cgaaaatgtt tgagatggac atcgtccccg tcgccctcaa
     3541 cagcggcgaa ttttggccga aaaattcctt tctgaaatat ccgggggaaa tcaccgtcat
     3601 catctgtccg accatcccgc acgcaagcgg cagcgaagcc gaattgatgg aaaaatgcga
     3661 acacctcatt gaaacgcaac aaccgcttat ttccggcgca ggcccgtttg ccgccgaaat
     3721 gccgtctgaa accgcatgac ctccctgatt cacactcttt cagacggcat agaactgacc
     3781 gtcgaaatca accgccgtgc caagaaaaac ctgattatcc gccctatcgg cacacatacc
     3841 gtccgcatca gcgtcccacc ctgcttctcc gtctccgccc tcaaccgctg gctgtatgaa
     3901 aacgaagccg tcctgcggcg gacactggcg aaaacaccgc cgcacaatac ggcaaaccgg
     3961 ctgcccgaac atatctggtt ccacggcagg cagcttgccc ttaccgccca tcaagacacg
     4021 caaatcctgc tgatgccgtc tgaaatcctc gtccccgaag gcgcgcccga aaaacagctt
     4081 gcgctgctgc gggacttttt ggaacggcag gcgcacagtt acctgattcc ccgtctcgaa
     4141 cgccacgccc gcaccacgca actgttcccc gcctcctcct cgctgacctc cgccaaaacc
     4201 ttctggggcg tgtgccgcaa aaccacaggc atacgcctca accggcggct ggtcggcgca
     4261 cccgaatacg ttgccgacta tgtctgcata cacgaactct gccacctcgc ccatcccgac
     4321 cacagccccg ccttttggga actgacccgc cgcttcgccc cctacacgcc cgaagcaaaa
     4381 cagcggatca aaatccacgg cagggagctt ttcgccttgg gctgacgcag ccccgggccg
     4441 acgctttcag acggcatccg tgccggaaca ggcacgcgcc cgcccgattc aaaccgcgat
     4501 gacgctttgc cgccggttcg gggcaggatg gcggcatccg cgccgtccgc accgtttcat
     4561 ttcacaccgc ccttccgaaa cccgcccgat ccgacgtgcg gtatgaaacg cttaagctga
     4621 cgcgaagtct tctactgatt tgcccgcgaa aataccgtcc gaaaggtttt cggacggcat
     4681 ttttttgcgt tttcctggat ggcggcggat tcgtaaaagg cgggcagggt ggattgcagg
     4741 atgggttgag gcctgccaaa tccgccaact ctaccgaata cgccgccgtc attcccgcgc
     4801 aggcgggaat ttggttttgt cggtgcggaa acttatcgga taaaacggtt tcttagattc
     4861 cacgtcctag attcccgcct gcgcgggaat gacggttcgg gtatttctga cgattcatcg
     4921 agccgtagca actgtatttt ccaccccgtc gggcaaaaat accaaaactc aaatcaagcc
     4981 gtccgaatac cgttttcggc ggtatcgtta tggcttcaac cggcgtaaac aaagaaatca
     5041 aaggcaaaaa actctccctg tgggccaagc gtcaagacgg ttcggtaaaa tggttctgcg
     5101 gacagccggt tcagcgcgcc gacaacgccg acaacgacgc cgtcaccgcc gccgccgccg
     5161 gcaaagacac caccaacatc gacaccaagc acctgccgtc aacctgccgc gataaatcat
     5221 ctgccgtttg cacgaaacac cacgcgccga tttcaaacac ttccaaaaaa tcagccgttg
     5281 ccgggtatta cccgaatcac ggcaaatggc cggaagacaa cacttctgcc ggcgtggcat
     5341 cccccgccga caaaatcaaa ggcaaatatg ttcagaaagt tga
//
LOCUS       DAXGCP010000114         5271 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.115, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000114 DAXGCP010000000
VERSION     DAXGCP010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5271)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5271)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5271
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.115"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            76..963
                     /locus_tag="ACFJCW_001966"
     CDS             76..963
                     /locus_tag="ACFJCW_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HFC4152022.1"
                     /translation="MSAPVILSAAATKGGVGKTTLIANVSAVLADIGLRVLMIDCDVQ
                     PSLSKYYPISHRAPNGIVELLLGENTEEIIRSTISNTVFPNLDIVISNNISAFVETEV
                     TSRPDRAFLLKSKLHSQYIQNNYDVVLIDTQGAVGPLLDTAAFAATCLLCPIMPEVLS
                     AREFLTGTQELLKRLQKGEAMRIPMPQLRAIIYAQDRTNDAKFIASSIKDFFSNTLDD
                     RRKLLSVAVPAAKAYKEATTLRVPVHCHERKQLGKMLPAYEIMHRIVYEIFPGIEQKN
                     LRGSCFNDMASLLQEEVQS"
     gene            960..2480
                     /locus_tag="ACFJCW_001967"
     CDS             960..2480
                     /locus_tag="ACFJCW_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB family protein"
                     /protein_id="HFC4152023.1"
                     /translation="MNLDQNKATLSLHIGTPAQTNMSFGQEDTPSRGMLMSLPISEID
                     FFDKNPRRLHDVSSYAAIKESIRSSGIQQPVHVTQRPGKSKYVLAQGGNTRLKILCEL
                     LEETGDNRFRMMPCIYIPYSDETTLQVAHLVENELRAEMCFWDKACKYAEIRDIFQDE
                     SDSGKLSLRELEVMFSDKGLTVSHKTLGLFFFASDNLQELQEYAFKLSHAKVEEIKKL
                     HSTLFSISKSIQLDDSFQYLWSDVLEQWHNQYSATELDVHELYQFVLDRFKFEYGSDA
                     FSETENSSDKDKIETAVKQDVNLHQKEVSENNTESKDSDMEFVPAKVNGTKADAEDEP
                     KEAEPITLEQTSKKLFSAVRKLLAKVSLSDCFKIHKDFPYGWYVEYPAFEHISASSAG
                     NAIYAIDVLHEEAGNVFTFLWKLSGIDTFMFDVGDSSNPLLTLKSDSKLRIAYEDPDK
                     YDEYTNCGIGNKENIIASLLNWQTNTSHEFHANIVEILSLSTQYNNLRKTGAKSEE"
     gene            2470..3075
                     /locus_tag="ACFJCW_001968"
     CDS             2470..3075
                     /locus_tag="ACFJCW_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152024.1"
                     /translation="MRSKPLISNPIYRLFNTDPVYTNLALTRLASAPNTPRESSYNAL
                     VAREHEDVLNTLKRMNPKRIEKLASMCPDVVTYSIDLKVLKSKISEMEHYEQRFMEQM
                     QRLKWMLEHKASNLMIMNLCSLISKAEIKKLRIEMNIPVVKGRIVMPSIDVRVRVLKA
                     WSKSEKEPDLFIRYQLLIDEFPDYSLAQLHSIINDVKFFGV"
     gene            3084..3827
                     /locus_tag="ACFJCW_001969"
     CDS             3084..3827
                     /locus_tag="ACFJCW_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152025.1"
                     /translation="MDFSTSYDYETGFVPSKNMSTDNFIRSLVALWEEPATYVRQFAQ
                     AVGSVSEGYFLSWFVEKCLPGEWVSLNNDLLFNEAGITAKQWRNIRNSLLQKGILLNR
                     RTVAPTESQFTLNDALFEDLVSKHGKSDVLDMVSPPISINKLHLKTLADRGLAFVSIL
                     YLSFLQSEAEYQDLSKRGDWSPWTHAAEKHVFYSTMLSRRQQERAIAELTSFGLIESC
                     VDGMPAARRCRYSLKMLADLTSEYLNGCV"
     gene            3827..>5271
                     /locus_tag="ACFJCW_001970"
     CDS             3827..>5271
                     /locus_tag="ACFJCW_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152026.1"
                     /translation="MVTATKLPPPKVFNSELTQCWQALQGGRRVAIYRCLIDITGSLK
                     TAAMLSQLIYWTRVSKEVAERDGWIFKSIAQMEAETGLTVREQRTCKNKLLETNLIQT
                     CRKGVGAALAIKVNLDAIAELIAKSSGTDDQLALTLADLQNTSSLYFRKHFSKRIAYH
                     RDLVSITGCINSAVLLSCVLNDAVGLVSQNPHLQRHAFATLTAADWEERTSLSYKSQL
                     TARNRLKNLNLIYERNFLASRRIFTLVNGHDIVISIKKLLAGKQDDGFSPYNSKKREI
                     LSLAERAKCDWRKGPNGLDKGFQSGFEGDAPLFPSMTSGSVEREYSDVSNWNFKKGHS
                     GKFISVDWGSSELPNRQIIYYINYKGVYNYNYMTVEPNKPRSSEQDHVVVVDDVDLIY
                     PKLFNVQMRQQADLIFTKHLSKSSWALRQEILDEIQGQKKEVTSPLGLLINLCRCASQ
                     GNFTALVAPQVRFQREQDQKLQAYLEKQNNQ"
BASE COUNT         1545 a         1044 c         1130 g         1552 t
ORIGIN      
        1 taaatttcat attttaaacc tgttcgattg cggatgtttt tctctttata aatcaattaa
       61 atataaggaa atattatgtc cgcacccgta atattgtctg cagccgctac aaaaggtggc
      121 gtaggtaaaa caacactcat tgctaatgtc tctgctgttc tcgctgatat cggactgcgt
      181 gtcttaatga ttgactgcga tgttcagcca tcattgtcaa aatactatcc aataagccac
      241 cgcgctccaa atggtattgt tgaattactt ctcggtgaaa ataccgaaga aatcatccgc
      301 tcgacaattt ccaataccgt ttttccgaat ttagacattg ttatttccaa taacatttct
      361 gcttttgtcg agactgaagt aacctctcgt cccgaccgtg ccttcttgct caaaagcaaa
      421 ctgcattccc aatacataca gaataactac gatgtggttt taatcgatac tcagggtgca
      481 gttggtcctc tcttagatac cgcagcattt gctgctacat gcctgctttg cccaattatg
      541 cccgaagttt tgagtgcccg tgagttcctt accggtacgc aagaacttct aaagcgtctg
      601 caaaaaggcg aagcaatgcg tatcccgatg cctcaattac gagccatcat ctacgcacaa
      661 gatcgtacca atgatgcgaa attcatcgca tcttctatca aagatttctt tagcaatact
      721 ctagatgaca gacgtaaatt gttaagcgta gcagttcctg ctgccaaagc atataaggaa
      781 gctacaactt taagagtccc ggttcattgt catgagcgta aacagcttgg aaagatgctg
      841 cctgcttatg aaatcatgca ccgtattgtt tatgagattt tccctggtat cgaacagaag
      901 aacctgcgtg gaagctgttt caatgacatg gccagcctgc tgcaagagga ggtgcaatca
      961 tgaatttgga ccaaaataaa gcaaccttga gcctgcacat cggtacccct gcacagacaa
     1021 atatgagttt tggccaagag gatactcctt ctcggggcat gttaatgtcg ttgccaatca
     1081 gcgaaatcga tttctttgac aaaaaccctc gccgtttaca tgatgtttcc agctacgcgg
     1141 ccatcaaaga gtccatccgt tcttcaggta ttcaacaacc tgtacacgtt acccagagac
     1201 ctggtaaaag taaatatgta ctggcacagg gtggtaatac ccgtctcaaa atcttgtgcg
     1261 aactcttgga agaaactggt gataaccgct tccgtatgat gccttgtatt tacatcccct
     1321 actctgacga aactacattg caggttgcgc atcttgttga aaatgaactc cgtgctgaaa
     1381 tgtgtttttg ggataaggcc tgtaaatatg ccgaaatccg cgatattttc caagatgaat
     1441 ctgactcagg gaaactttct ttgcgcgaac tggaagtgat gttttctgat aaaggcctta
     1501 cggtttctca taagacttta ggattattct tttttgcctc cgataattta caagagctgc
     1561 aagaatacgc attcaaactt tcccatgcaa aagtagaaga aattaaaaaa cttcactcta
     1621 ccctattctc aatttctaaa tcaattcagt tggacgattc tttccaatat ttgtggtcgg
     1681 atgtactgga gcagtggcat aaccaatatt ctgcaacaga gttagacgtg catgagcttt
     1741 atcagttcgt gctcgacaga tttaaatttg aatatggctc tgacgccttt tctgaaacag
     1801 aaaattcttc tgataaagac aaaattgaaa cagccgtcaa acaagatgtc aatttgcatc
     1861 aaaaagaggt atcggaaaac aacactgagt caaaggattc ggatatggaa tttgtgccag
     1921 ccaaagtaaa tggtactaaa gctgatgcag aggatgagcc gaaagaagcc gaaccgatta
     1981 ctttggagca aaccagcaaa aaactgtttt ctgctgttcg taaactgtta gccaaagtga
     2041 gtctgtccga ttgctttaag attcataagg actttccata cggctggtat gtcgaatatc
     2101 cggcttttga gcatatttca gcatcaagtg ccggaaatgc catctatgct attgatgttt
     2161 tgcatgaaga agccggaaat gttttcacat tcttatggaa gcttagtgga atcgacacct
     2221 ttatgtttga tgttggtgat agttccaatc ccctgctgac acttaaaagt gattcaaagc
     2281 ttcgtattgc ctacgaggac cccgataagt acgacgaata tacgaactgc ggaattggta
     2341 ataaagagaa cattattgcc tctttactga attggcaaac taataccagc catgaatttc
     2401 acgccaatat cgtagaaata ttatctctga gcacacagta caacaacttg agaaaaacgg
     2461 gagctaagag tgaggagtaa gcctttaatt agtaatccca tttatagact ttttaatacg
     2521 gatccggttt ataccaatct tgcacttaca aggttggcat ccgcaccaaa tacgccgcgt
     2581 gaatcttctt ataacgcttt ggttgctcgt gaacatgagg atgttttgaa cacgctcaaa
     2641 cgaatgaacc cgaagcggat tgagaaatta gcatccatgt gtcctgatgt tgtgacctac
     2701 tccattgatc tgaaggtttt aaaaagcaaa atttcagaaa tggaacatta cgaacaaagg
     2761 tttatggaac agatgcagcg tcttaaatgg atgttagaac ataaggccag caatctgatg
     2821 attatgaatc tatgttcatt aatttctaag gcggaaatta aaaaattgcg tatagaaatg
     2881 aatattcctg tcgttaaagg gcgcattgtg atgccatcta ttgatgttcg cgtcagggta
     2941 ttgaaggcat ggagtaagtc ggaaaaagag ccagatttgt ttattagata ccagctattg
     3001 attgatgaat tccccgatta tagccttgcc caattacatt caataattaa cgatgtaaag
     3061 ttctttggag tatgagtatg tatatggatt tctctacttc ctatgattat gagactggtt
     3121 ttgtaccatc taagaacatg tcaaccgata actttatccg tagcttggtt gccttgtggg
     3181 aggaaccggc cacatatgtg cgtcagtttg ctcaggcggt cggttctgtt tcagagggat
     3241 attttttgag ttggtttgtc gagaaatgtc tgcctggcga atgggtaagc ctgaataatg
     3301 atctgttgtt taatgaagca ggtattaccg caaagcagtg gcggaatatt cgcaatagcc
     3361 ttctgcagaa aggtattttg cttaatcgga gaaccgtagc gccaaccgaa tcacaattca
     3421 cattgaatga tgctcttttt gaggatttgg taagtaaaca tggtaaatca gatgtacttg
     3481 acatggtttc gccccctatt tcgattaata aacttcacct gaagacatta gccgatagag
     3541 gtcttgcttt tgtatccatt ttgtatttgt cgtttcttca aagtgaagct gaatatcaag
     3601 atttgagtaa gcgtggtgac tggtctcctt ggactcatgc agctgaaaag cacgtttttt
     3661 attcaacaat gttgtcaaga cggcaacagg aaagagctat tgccgaatta acctcttttg
     3721 gtttgattga gagctgtgtt gatggtatgc cagcagcgcg acgttgtaga tacagcttga
     3781 aaatgcttgc tgatcttact tctgaatatt tgaacggatg tgtgtgatgg ttaccgccac
     3841 caaattaccc cctcccaaag tatttaactc tgaactgaca caatgctggc aagcattgca
     3901 aggtggtcga agggttgcca tctatcgatg tttaattgat attacaggct ctctgaagac
     3961 tgctgcaatg ctttctcagt taatctattg gacaagagta agcaaagagg ttgccgaacg
     4021 ggatggttgg attttcaagt ctattgctca gatggaagct gaaactggtt tgacagtgag
     4081 agagcagcgc acttgtaaaa acaagcttct tgagacaaac cttattcaaa catgccgtaa
     4141 aggtgtgggg gctgctttag caatcaaagt gaacttggat gccatagctg agttgatcgc
     4201 taaatcgagc ggtactgacg atcaacttgc acttacgctg gctgatttac agaacacaag
     4261 ttccctgtat tttagaaaac acttttctaa aaggattgct tatcaccgag acctggtttc
     4321 tattacaggc tgtatcaact cggctgtatt attgtcgtgt gtgttaaatg atgcggttgg
     4381 tttggtttct caaaatccac atttacaacg tcatgccttt gctactttga ctgctgctga
     4441 ttgggaggaa agaacctctc tctcttataa atctcaattg acagctcgca ataggctgaa
     4501 gaatttaaat ctcatttatg agagaaattt cttggccagc cgccgtattt ttaccctggt
     4561 aaatggtcac gatattgtta tatccatcaa aaaacttcta gctggcaaac aggacgacgg
     4621 ctttagtcca tataactcca aaaaacgcga aattctcagt ttggcggaaa gggccaaatg
     4681 tgattggcgg aaagggccaa atggattgga taaagggttt cagagcggtt tcgagggtga
     4741 tgccccccta ttcccaagta tgacatccgg aagtgtcgaa agggaatatt cggatgtgtc
     4801 gaattggaat tttaagaaag gtcatagtgg gaaattcata agtgtcgatt ggggaagttc
     4861 agaattgccg aatcggcaga ttatttatta tataaattac aaaggggttt ataactacaa
     4921 ctacatgact gttgaaccca acaaaccacg ttcttccgaa caagatcatg tggtagtggt
     4981 tgatgatgtt gatttgattt atccaaaact ttttaatgtg caaatgcgtc aacaggcgga
     5041 tttgattttt acaaaacatc tctcaaaaag ttcctgggct ttgaggcagg aaatcttgga
     5101 tgagatccag ggacagaaaa aagaagttac tagccccctt ggtcttttga ttaacctatg
     5161 ccgctgcgct tcgcaaggta actttactgc tcttgtcgcc ccacaggtta gattccagcg
     5221 tgagcaggat cagaaattac aggcttatct tgaaaagcag aataaccaaa a
//
LOCUS       DAXGCP010000115         5269 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.116, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000115 DAXGCP010000000
VERSION     DAXGCP010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5269
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.116"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(120..806)
                     /locus_tag="ACFJCW_001971"
     CDS             complement(120..806)
                     /locus_tag="ACFJCW_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replication initiation protein, NGO0469
                     family"
                     /protein_id="HFC4152027.1"
                     /translation="MSLILSVKDESNFKPCPAGSHHATCIRIIDLGTQLVEYQNEQKR
                     QHKILVQWEIDPEGDPEMLMPDGRPYLISRRYTASLHSKSQLATDLKSWRGRDFTPEE
                     RDNFDLRNILGKPCLLSIAHQESSDGKTTYANISAISNKMKSYTPKQPDNAVFAFDLS
                     DPDWANYGLLNEKLREQIAKSPEYAEAVNGRQPPAPPQKQAQAAEGRTEYPQGNAAPA
                     EDIEDDIPFN"
     gene            complement(875..1036)
                     /locus_tag="ACFJCW_001972"
     CDS             complement(875..1036)
                     /locus_tag="ACFJCW_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152028.1"
                     /translation="MSFHPETAYTGGGETEPYGPSPEEIKYRQSPETAETRRMTEKQA
                     EGHIKSIIR"
     gene            complement(1033..1308)
                     /locus_tag="ACFJCW_001973"
     CDS             complement(1033..1308)
                     /locus_tag="ACFJCW_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO1622 family putative holin"
                     /protein_id="HFC4152029.1"
                     /translation="MKTRNIAFKFAVLAAVLAAGYAFGFAKGGGSRTAKGKPAGIAAM
                     RMALAQKQAEVAELSAEIWLEERHLNAEEEAGCRRVHGDAEVPEGKE"
     gene            complement(1463..1795)
                     /locus_tag="ACFJCW_001974"
     CDS             complement(1463..1795)
                     /locus_tag="ACFJCW_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152030.1"
                     /translation="MKYYGTAAYGSPDWGMERYYAREDMRQALDGWEAENRILHESGL
                     IEIAKKSAREFVRDADGEPYAQEDWETYLTEDASRVGKDTEAAMNYAIDEREWFALAE
                     NIGRLANS"
     gene            complement(1936..2217)
                     /locus_tag="ACFJCW_001975"
     CDS             complement(1936..2217)
                     /locus_tag="ACFJCW_001975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152031.1"
                     /translation="MSYLDQPLKHGYGNGNGSGYGNGYGNGYGNGYGNGKGYSNGSGN
                     GDGDGNGNGSGNGSGNGDGDGNGNGSGNGSGNGDGDGNGSGNGSGYGNG"
     gene            complement(2214..2690)
                     /locus_tag="ACFJCW_001976"
     CDS             complement(2214..2690)
                     /locus_tag="ACFJCW_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152032.1"
                     /translation="MEANKFEVKSLSDLIKVFAGIAADFEAAMGVKRADISTEFDEPQ
                     HEPQPPVTVAEQKGINDFAIGKEVIIRTYSAGVWFGVLKQKAGNEVILTKARRMYSWW
                     AKESISLSGVARHGIRQDGSQICGELDSVWLEAIEIIPVTGGAAESIRTALEVAQS"
     gene            complement(2723..2923)
                     /locus_tag="ACFJCW_001977"
     CDS             complement(2723..2923)
                     /locus_tag="ACFJCW_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152033.1"
                     /translation="MNELISRINRVGAREKDGQSLLLKVGEICRDAAATWTTRKSESI
                     NHTAFTFTVKKDGLKEKVMIVL"
     gene            complement(3121..3534)
                     /locus_tag="ACFJCW_001978"
     CDS             complement(3121..3534)
                     /locus_tag="ACFJCW_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152034.1"
                     /translation="MIHLNVHYCDEIIRHAENDKYSLIGIFPDICHIPTPQAILGRLC
                     LSVSFSAEGMDIQTMKTGQIFLEIVRNDDVISALEIPSYDGSDTEENVSFMLHQTISG
                     LPVSDNDRIYVRMTTHNHILSESRPLSFSWLPYHS"
     gene            complement(3531..3992)
                     /locus_tag="ACFJCW_001979"
     CDS             complement(3531..3992)
                     /locus_tag="ACFJCW_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4152035.1"
                     /translation="MGATLTVAVAACTVSTPTSAIPVTHIKCLRINGQIKCVKPISPN
                     TTPAAEHIEHVRKNPRRKAAMDRAAARIADKIALKAGGETFVSLRMKKGFTQSELATA
                     AGLPQPYLSRIENSKQSLQDKTVQKLANALGVSPLEVRAAFERRYEYMEQA"
     gene            complement(4009..4446)
                     /locus_tag="ACFJCW_001980"
     CDS             complement(4009..4446)
                     /locus_tag="ACFJCW_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152036.1"
                     /translation="MELTVHFNAEQDLDRLFEKDEEAVGYLENVIAMIQADSAIFDGL
                     YKNRYFREYGEPIGPIDLEVKPILSLWGKDIKVLRVRFDSEEAAGYRIIYAPCHEKQP
                     NGTYIRRIDILAVVNKKTDEFDYQAEHPITKRIIKDYEELYSN"
     gene            complement(4557..>5269)
                     /locus_tag="ACFJCW_001981"
     CDS             complement(4557..>5269)
                     /locus_tag="ACFJCW_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HFC4152037.1"
                     /translation="FIIDYQCLCAINSEIKMFSGEQLGQAISEAIKRKNVSQKEVADH
                     FGVKQPSVSGWIKNGRIDKKHLDKLIDYFSDVVTPSHFGIETFRVLKSNEQSSIRFPR
                     LNAEATCGAGTINDHYIEVVDYVTVAAAWAREKLGGNLNKIQVITARGDSMEPTIENG
                     DVMFVDTAVEAFDGDGLYLLWYIDGLKAKRLQSTVGGGLMIISDNSSYRTETVRGEDL
                     NAVRIIGRIRGAWRLSQF"
BASE COUNT         1004 a         1382 c         1313 g         1570 t
ORIGIN      
        1 ttgccgtccg aagcagttgc aaactaaaaa tcgactactg cttcagagtg cggggcccgc
       61 ccgcagggcg cggcgtttgt ttgcggtttt ccgtccggtt ttacgccctg acggcgggct
      121 taattaaaag ggatgtcgtc ctcgatgtct tcggcaggcg cggcattgcc ttgcggatat
      181 tccgtccgcc cttccgccgc ttgggcctgt ttctgcggcg gcgccggcgg ttggcggccg
      241 tttacggctt cggcatattc cgggcttttg gcaatctgct ccctcagttt ctcgttcagg
      301 aggccgtaat tcgcccaatc ggggtctgac aggtcgaagg caaaaacggc gttgtccggc
      361 tgtttcgggg tgtagctctt catcttgttg ctgatggcgg aaatgttggc ataggtggtt
      421 ttgccgtcgc tgctttcttg gtgggcgata ctcaacaggc agggcttgcc caaaatattg
      481 cgcaaatcga agttgtcgcg ttcttccggt gtaaagtccc ttccgcgcca gcttttgagg
      541 tctgttgcca gttggctttt gctgtgcagg ctggcggtgt accggcggct gatgaggtag
      601 ggcctgccgt ccggcatcag catttccgga tcgccttcag ggtcgatttc ccactgcact
      661 aaaatcttgt gctgccgctt ttgttcgttt tggtactcga cgagctgcgt acccaaatcg
      721 atgatgcgga tgcaggtggc gtgatggctg cctgccgggc atggtttgaa attgctttcg
      781 tctttcacac ttaaaatcaa tgacattttc ggtctcctgt taaaggtcgt ttcgtctatc
      841 ggtctcgcgc tgttttatgc cttgcgcggc ggcgttacct gataatgctt ttaatgtggc
      901 cttctgcctg tttttcggtc atccgccgtg tttcggcggt ttccgggctt tgccggtatt
      961 tgatttcttc ggggcttggt ccgtacggct ctgtttctcc gccgccggtg taagcggttt
     1021 cgggatggaa gctcattctt taccctccgg cacttccgca tcgccgtgca cccgccggca
     1081 accggcttct tcttccgcat tcagatgccg ctcttccagc caaatctcgg cgctcaattc
     1141 cgcaacttcc gcctgctttt gagccaacgc catgcgcatt gccgcaatac cggcgggttt
     1201 tccctttgcc gtacggcttc cgcctccctt ggcgaatccg aaggcatagc ccgccgccaa
     1261 taccgccgcc aataccgcaa acttaaacgc aatattcctt gtcttcattt ctatttcctt
     1321 aatttaaaag gtttcaaatt gcgcaccgcg tccgctaagg atgtgtacgg accgtgcgcc
     1381 gtcggggtta tctgcggcta aaatctacaa aaaccgccgc cgcgcccact cgccggctga
     1441 cggcgcggca ttcctatgcc cgctatgaat ttgccagcct gccgatgttc tccgccagcg
     1501 cgaaccattc ccgctcgtct atggcgtagt tcatcgcggc ttcggtatct ttaccgacac
     1561 gggaagcatc ttccgtaagg tacgtttccc aatcttcttg ggcgtaaggc tcgccgtccg
     1621 catcgcggac aaactcccgc gccgattttt tggcaatctc aatcaacccg gattcgtgca
     1681 ggattcggtt ttccgcctcc caaccgtcca aagcctgccg catatcctcc cgcgcgtaat
     1741 atctttccat cccccaatcg gggctgccgt aagccgccgt gccgtaatat ttcaccgcct
     1801 tcgtcctttc cgtttgagaa aaccgcccgc agcattcact gtttcgccgt gccgttgccc
     1861 cgctttgaag ttcgatactt catcgctttg tgctatcccc ggcttggcag atatagcttc
     1921 gggcggtttt aaggtttagc cgttgccata gccgctaccg ttgccgctac cgttgccgtc
     1981 gccgtcgccg ttgccgctac cgttgccgct accgttgccg ttgccgtcgc cgtcgccgtt
     2041 gccgctaccg ttgccgctac cgttgccgtt gccgtcgccg tcgccgttgc cgctgccgtt
     2101 gctgtagccc ttgccgttgc cgtagccgtt gccgtagccg ttgccgtagc cgttgccata
     2161 gccgctaccg ttgccgttgc cgtagccgtg cttcaatggt tgatctagat aactcatgac
     2221 tgggcgacct ccagcgcggt gcggattgat tcagccgcgc cgcctgttac tgggataatc
     2281 tcaatcgcct cgagccatac ggaatcaagc tcgccgcaaa tttggctgcc gtcttgcctg
     2341 atgccgtgtc gtgcgacacc tgacaggctg attgattcct ttgcccacca gctgtacatt
     2401 cggcgcgctt ttgtcagaat cacttcattg cctgcttttt gtttcaacac accaaaccaa
     2461 acgcctgccg aataagtgcg gatgatgact tccttgccga tggcaaagtc gttgatacct
     2521 ttttgctcgg caactgttac cggcggttgc ggctcatgtt gcggttcgtc aaattcggtt
     2581 gaaatgtcgg cgcgttttac acccattgcc gcttcgaaat cggcagcaat gcctgcaaag
     2641 acttttataa ggtctgacaa acttttcact tcaaatttat ttgcttccat ttttgtttcc
     2701 tttcggggtg gggttggttt ctttacaaaa caatcattac cttctctttt aagccgtctt
     2761 ttttcactgt aaaagtgaag gcggtgtgat tgatgctttc gctttttcta gtggtccatg
     2821 tcgctgctgc gtcgcggcag atttcgccga ctttcaataa aaggctttgc ccgtcctttt
     2881 ccctcgcgcc gacccggttt attctgctga ttaattcgtt catcccgttt ccttcaagtt
     2941 gttgtttgtt tcgatgggtg tattataact attacctata tttaatcaat aggcaatagt
     3001 tatattttca tccatatata cttattgaat tgatttttag aagaaaaaag tttgaaaaaa
     3061 aaccgcccga atggcggtgt atcatgaaaa agaaaaccgc cctagggcgg ttcggtattg
     3121 ttatgagtgg taaggaagcc aagaaaaaga caaaggacgg ctctcggaga gaatatggtt
     3181 gtgtgttgtc attcttacat aaatgcggtc gttgtctgaa acgggtagtc cgctgattgt
     3241 ttggtgtagc atgaatgaca cgttttcttc tgtatcactg ccgtcatatg atggaatctc
     3301 aagtgcagag attacatcat cgttgcggac gatttccaga aaaatttgac cggttttcat
     3361 agtctgtata tccatgcctt cggcggaaaa tgaaacagac aggcacaggc ggcctagaat
     3421 ggcctgcggt gtcggaatat ggcatatatc ggggaatata cctatcaggc tgtatttgtc
     3481 attttccgca tggcggataa tttcatcgca atagtggaca tttaagtgaa tcatgcctgc
     3541 tccatatatt cgtaccgccg ttcgaacgct gcgcgaactt caagcgggga aacgcctaat
     3601 gcgtttgcca atttttgtac agtcttatct tgcagggatt gtttgctgtt ttcgatgcgg
     3661 gacagatagg gttgaggcaa tcctgcggcg gttgccaatt cggactgggt aaaccccttt
     3721 ttcatcctta agctgacaaa tgtttccccg cctgctttga gggctatttt atcggcaatt
     3781 cttgctgccg ccctgtccat cgctgctttg cggcgcggat ttttccgcac atgctcaata
     3841 tgctctgcgg caggggtagt gttagggctt atcggtttga cgcatttaat ctgcccgttt
     3901 atccgcaggc attttatgtg ggtgacgggg atggcggatg taggtgttga tactgtgcag
     3961 gcggccacgg caacagtgag tgttgcaccc attttgaacc atgtgccgtt agttggagta
     4021 cagttcttca tagtctttga taatccgttt tgtgattggg tgttctgcct gatagtcaaa
     4081 ttcgtctgtc ttcttgttta caacagccaa tatatctatg cggcggatat acgtgccgtt
     4141 tggctgtttt tcatggcatg gtgcgtaaat tattctgtat ccggcggctt cttcgctgtc
     4201 aaatcggacg cgtaaaactt tgatgtcttt tccccataat gacaatatgg gtttcacttc
     4261 caagtcaatc gggcctatgg gttcgccata ttccctgaag tatctgtttt tgtataagcc
     4321 gtcaaaaata gcagagtccg cctgaatcat cgcaatgaca ttctcgagat aaccgaccgc
     4381 ttcttcgtct ttttcaaaga ggcggtctaa atcctgctcg gcgttaaagt ggacggtcag
     4441 ctccatgagt gcccttttta tatatattat atctttttag ttataccgcg caatatgcgg
     4501 taataaatca gttgttcaag tattttaatc cggcacgctc caccagaaga cgcggtctag
     4561 aactggctca aacgccatgc gccgcgtatg cgtccgatga tgcgtacggc gtttaaatct
     4621 tcgccgcgca cggtttcggt tcggtatgag ctgttgtcgc tgatgatcat caggccgccg
     4681 ccgacggtgg attgcagccg cttggcctta aggccgtcta tataccaaag caggtagagg
     4741 ccgtcgccat cgaaggcttc gacggcggta tcaacgaaca ttacgtcgcc gttttcgatg
     4801 gtgggctcca tgctgtcgcc acgggctgta atgacttgga ttttgttgag gtttccgccc
     4861 agtttctccc gcgcccatgc ggcagcgacg gttacataat ccacaacctc gatatagtgg
     4921 tcgttaatcg tgcctgcgcc gcaggtcgct tcggcattta agcgggggaa acgtatgcta
     4981 ctttgttcat tcgattttaa gactctgaat gtttcaatgc cgaaatggct tggcgttact
     5041 acgtctgaga aataatcaat taatttatct agatgttttt tatctattcg tccatttttt
     5101 atccaacctg aaacgcttgg ctgtttcacc ccaaaatgat cggcaacctc cttttgactg
     5161 acattttttc tcttaatcgc ttctgatatt gcttgtccta actgttcgcc tgaaaacatt
     5221 ttgatctccg aattaattgc gcataagcat tggtaatcga taataaaag
//
LOCUS       DAXGCP010000116         5225 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.117, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000116 DAXGCP010000000
VERSION     DAXGCP010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5225)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5225)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.117"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            144..611
                     /locus_tag="ACFJCW_001982"
     CDS             144..611
                     /locus_tag="ACFJCW_001982"
                     /inference="COORDINATES: protein motif:HMM:NF014691.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family protein"
                     /protein_id="HFC4152038.1"
                     /translation="MAHLQTIHRELFGNVYDWAGKIRRVDISKGNTRFANFAFIENES
                     RKLLEKLKNENYLRVLDKDKFAERAAYYLDELNVLHPFREGNGRTLRLFMTQLAIKNG
                     FQIHWQNISAEQMIQACIQAYHADSSLLARLIIRQFRTIVFFRRLKHQQTTIF"
     gene            624..1010
                     /gene="iscU"
                     /locus_tag="ACFJCW_001983"
     CDS             624..1010
                     /gene="iscU"
                     /locus_tag="ACFJCW_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HFC4152039.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            1097..1417
                     /gene="iscA"
                     /locus_tag="ACFJCW_001984"
     CDS             1097..1417
                     /gene="iscA"
                     /locus_tag="ACFJCW_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HFC4152040.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEANGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEDLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(1377..1598)
                     /locus_tag="ACFJCW_001985"
     CDS             complement(1377..1598)
                     /locus_tag="ACFJCW_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HFC4152041.1"
                     /translation="MGGKAQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKRRDGFDTVPPFLCLKRGSSRRSRRSL"
     gene            1680..2180
                     /gene="hscB"
                     /locus_tag="ACFJCW_001986"
     CDS             1680..2180
                     /gene="hscB"
                     /locus_tag="ACFJCW_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HFC4152042.1"
                     /translation="MSQYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTSFAPDFLMQQMEWRET
                     LMEARAGNNLESLKNLDNEIRAEQEKLFCGLKQSFARQDCDTAAQQVRQGRFLDKLRH
                     EISSAL"
     gene            2278..5028
                     /gene="gyrA"
                     /locus_tag="ACFJCW_001987"
     CDS             2278..5028
                     /gene="gyrA"
                     /locus_tag="ACFJCW_001987"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HFC4152043.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDFAVYATIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLTDTINACLRLLDEPKTEIDELID
                     IIQAPDFPTGATIYGLGGVREGYKTGRGRVVMRGKTHIEPIGKNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIKLIKESPNAAEAKEKLLARPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKKQGYYLSEIQADAILRMSLRNLTGLDQKEIIESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     DLEDETADNENTLPSGKNGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGSIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSGASVISNVTEPEA
                     EN"
BASE COUNT         1469 a         1453 c         1225 g         1078 t
ORIGIN      
        1 agacgtaatc tatatgaatg atggtgtatt tagaaataaa ttagccattc aagatccact
       61 taaatttaaa aaaggtcgaa agagacattt ctgctatttc cgcccaaaat ctgcttttgc
      121 aacccattac aggcaatttc gatttggcgc atttacagac cattcatcgc gaactgtttg
      181 gcaatgttta tgattgggca ggaaaaatcc ggagggttga tatttctaaa ggtaataccc
      241 gatttgccaa ttttgctttt atcgaaaacg aaagccgtaa acttttggag aagctgaaaa
      301 acgaaaacta tttgcgggtg ttggataaag ataaattcgc cgagcgtgca gcctattatt
      361 tggacgagtt gaacgtccta catccttttc gtgaaggaaa cggcagaaca ttgcgcctgt
      421 ttatgacaca attggcaata aaaaacggtt ttcagataca ttggcaaaat atctctgccg
      481 aacaaatgat tcaagcctgt attcaggcat accatgccga tagcagctta ttggcacgcc
      541 taattattag acaatttaga acaatcgtct ttttcagacg actaaaacat caacaaacca
      601 cgatatttta aggaaaccac atcatggcat acagcgataa agtaatcgac cactacgaaa
      661 atccccgcaa cgtcggcact ttcgacaaaa acgacgagtc cgtcggcacc ggcatggtcg
      721 gcgcgcccgc ctgcggcgac gtgatgcgcc tgcaaatcaa agtgaacgat gaaggcatca
      781 tcgaagatgc gaaattcaaa acttacggct gcggttccgc catcgcttcg tccagcctga
      841 ttaccgagtg ggtcaaaggc aaaagtctgg atgacgcgct ggcaatcaaa aacagcgaaa
      901 tcgccgaaga actggaattg ccgccggtaa aaatccactg ctccatcttg gctgaagatg
      961 cggtaaaagc ggccgttgcc gactaccgca aacgtcagga aaacagataa agcccttcag
     1021 acggcatcgt cccacaatgc cgtccgaacc gcccgccgct tcggatccgt ccggggcggt
     1081 acaacaagga agaaatatga ttacccttac cgagaatgcc gcaaaacaca tcaatgacta
     1141 tctcgccaaa cgcggcaaag gcttgggcgt acgcttgggt gtaaaaacca gcggctgctc
     1201 ggggatggcg tacaaccttg aatttgtcga tgaagccaac ggcgacgacc tgattttcga
     1261 aggacacggc gcgcgcattt atatcgaccc gaaaagcttg gtttatctgg acggcacaca
     1321 agtcgattac accaaagaag atttgcagga aggtttcaaa tttgaaaacc ccaatgtcaa
     1381 agactcctgc ggctgcggcg agagcttcca cgtttaaggc ataaaaacgg cgggacagta
     1441 tcaaaaccgt cccgccgttt tttcgcttcc tgcctgttgt agctgccttt gcctttcctt
     1501 ttccgttcca ccttgtgccg gaacaaatcg gattttacta aggcttttaa agcattgtcg
     1561 cgtattttgc ctttattgtg ctgcgctttg ccgcccatat tcagtccttt cgtttaagaa
     1621 gccgcagatt ataaggcaaa aacagttttc tgccaaaatc ttacatttat catcctacta
     1681 tgtcccaata tttcaccctc ttccggattg aacccgcttt cgatatcggc accgaaaact
     1741 tggaacaaac ctaccgcgcc ttggccgccc gtttccatcc cgacaaattc gcttccgctt
     1801 ccgctttcga gcagaaacag gcggttatga tgtcttccac catcaacgat gcctaccgca
     1861 ccttgaaaaa tcccatcgac cgcgccgcgt acctgctgaa aacatcgggt atcgatgccg
     1921 acgcgccgga acatacctct ttcgcccccg acttcctcat gcagcaaatg gaatggcgcg
     1981 aaacgctgat ggaggcacgg gcaggcaaca accttgaatc cttgaaaaat ctcgataacg
     2041 aaatccgcgc cgaacaagaa aaactgttct gcggtctgaa acagtcattc gcgcgccaag
     2101 actgcgacac cgccgcacaa caagtccgcc aaggcaggtt tctcgacaaa ctccgccacg
     2161 aaatttcctc cgcattataa tccgcaccgt gtttcagacg gcataaccgc cgcaccgttt
     2221 catgtcgaaa tatgctaaaa taagcaacaa ttttttgcca tacgaaacat tgaaaccatg
     2281 accgacgcaa ccatccgcca cgaccacaaa ttcgccctcg aaaccctgcc cgtcagcctt
     2341 gaagacgaaa tgcgcaaaag ctatctcgac tacgccatga gcgtcattgt cgggcgcgcg
     2401 ctgccggacg ttcgcgacgg cctaaagccg gtgcaccggc gcgtactgta cgcgatgcac
     2461 gagctgaaaa ataactggaa tgccgcctac aaaaaatcgg cgcgcatcgt cggcgacgtc
     2521 atcggtaaat accaccccca cggcgatttc gcagtttacg ccaccatcgt ccgtatggcg
     2581 caaaatttcg ctatgcgtta tgtgctgata gacggacagg gcaacttcgg atcggtggac
     2641 gggcttgccg ccgcagccat gcgctatacc gaaatccgca tggcgaaaat ctcacatgaa
     2701 atgctggcag acattgagga agaaaccgtt aatttcggcc cgaactacga cggtagcgaa
     2761 cacgagccgc ttgtactgcc gacccgtttc cccacactgc tcgtcaacgg ctcgtccggt
     2821 atcgccgtcg gtatggcgac caacatcccg ccgcacaacc tcaccgacac catcaacgcc
     2881 tgtctgcgtc ttttggacga acccaaaacc gaaatcgacg aactgatcga cattatccaa
     2941 gcccccgact tcccgaccgg ggcaaccatc tacggcttgg gcggcgtgcg cgaaggctat
     3001 aaaacaggcc gcggccgcgt tgttatgcgc ggtaagaccc atatcgaacc cataggcaaa
     3061 aacggcgaac gcgaagccat cgttatcgac gaaatcccct atcaggtcaa caaagccaag
     3121 ttggtcgaga aaatcggcga tttggttcgg gaaaaaacac tggaaggcat ttccgagctc
     3181 cgcgacgaat ccgacaaatc cggtatgcgc gtcgttatcg agctgaaacg caacgaaaat
     3241 gccgaagtcg tcttaaacca actctacaaa ctgactccgc tgcaagacag tttcggcatc
     3301 aatatggtgg ttttggtcga cggacaaccg cgcctgttaa acctgaaaca gattctctcc
     3361 gaattcctgc gccaccgccg cgaagtcgtt acccgacgta cgcttttccg gctgaagaag
     3421 gcacgccatg aagggcatat cgccgaaggc aaagccgtcg cactgtccaa tatcgatgaa
     3481 atcatcaagc tcatcaaaga atcgcccaac gcggccgagg ccaaagaaaa actgcttgcg
     3541 cgcccttggc gcagcagcct cgttgaagaa atgctgacgc gttccggtct ggatttggaa
     3601 atgatgcgtc cggaaggatt ggctgcaaac attggtctga aaaaacaagg ttattacctg
     3661 agcgagattc aggcagatgc tattttacgc atgagcctgc gaaacctgac cggcctcgat
     3721 cagaaagaaa ttatcgaaag ctacaaaaac ctgatgggta aaatcatcga ctttgtggat
     3781 atcctctcca aacccgaacg cattacccaa atcatccgtg acgaactgga agaaatcaaa
     3841 accaactatg gcgacgaacg ccgcagcgaa atcaacccgt tcggcggcga cattgccgat
     3901 gaagacctga ttccgcaacg cgaaatggtc gtgaccctga cccacggcgg ctatataaaa
     3961 acccagccga ccaccgacta tcaggctcag cgtcgcggcg ggcgcggcaa acaggcggct
     4021 gccaccaaag acgaagactt tatcgaaacc ctgtttgttg ccaacacgca tgactatttg
     4081 atgtgtttta ccaacctcgg caagtgccac tggattaagg tttacaaact gcccgaaggc
     4141 ggacgcaaca gccgcggccg tccgattaac aacgtcatcc agctggaaga aggcgaaaaa
     4201 gtcagcgcga ttctggcagt acgcgagttt cccgaagacc aatacgtctt cttcgccacc
     4261 gcgcagggaa tggtgaaaaa agtccaactt tccgccttta aaaacgtccg cgcccaaggc
     4321 attaaagcca tcgcactcaa agaaggcgac tacctcgtcg gcgctgcgca aacaggcggt
     4381 gcggacgaca ttatgttgtt ctccaacttg ggcaaagcca tccgcttcaa cgaatactgg
     4441 gaaaaatccg gcaacgacga agcggaagat gccgacatcg aaaccgagat ttcagacgac
     4501 ctcgaagacg aaaccgccga caacgaaaac accctgccaa gcggcaaaaa cggcgtgcgt
     4561 ccgtccggtc gcggcagcgg cggtttgcgc ggtatgcgcc tgcctgccga cggcaaaatc
     4621 gtcagcctga ttaccttcgc ccctgaaacc gaagaaagcg gtttgcaagt tttaaccgcc
     4681 accgccaacg gatacggaaa acgcaccccg attgccgatt acagccgcaa aaacaaaggc
     4741 gggcaaggca gtattgccat taacaccggc gagcgcaacg gcgatttggt cgccgcaacc
     4801 ttggtcggcg aaaccgacga tttgatgctg attaccagcg gcggcgtgct tatccgtacc
     4861 aaagtcgaac aaatccgcga aaccggccgc gccgcagcag gcgtgaaact gattaacttg
     4921 gacgaaggcg aaaccttggt atcgctggaa cgtgttgccg aagacgaatc cgaactctcc
     4981 ggcgcttctg taatttccaa tgtaaccgaa ccggaagccg agaactgaaa atcatctccc
     5041 gatgccgtct gaagattcag acggcattta tttttccctc atccgtcatc cagcttctca
     5101 caatatagcg gattaacaaa aatcaggata aggcgacgaa gccgcagaca gcacaaatat
     5161 agtggattaa atttaaacta gtacagcgtt gcctcgcctt gccgtactat agtcaattaa
     5221 aaaca
//
LOCUS       DAXGCP010000117         5138 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.118, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000117 DAXGCP010000000
VERSION     DAXGCP010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5138)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5138)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5138
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.118"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            282..1829
                     /gene="lpt3"
                     /locus_tag="ACFJCW_001988"
     CDS             282..1829
                     /gene="lpt3"
                     /locus_tag="ACFJCW_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HFC4152044.1"
                     /translation="MYSSLLTASEIAYRFVFGIETLPAAKMAETFALTFVIAALYLFA
                     RYKATRLLIAVFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGSAGASMLDKLW
                     LPALWGVAEVVLFCSLAKFRRKTHFSADILFAFLMLMIFVRSFDTKQEHGISPKPTYS
                     RIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSKIGQGSIQNIVLIMGESESAAH
                     LKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIPHANGLEQISG
                     GDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLGYGNGDNMPDE
                     KLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIADKYDNTIHKTDQ
                     MIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYIVPLVLYSPDKAVQ
                     QAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGDAGSLNIRNGK
                     AEYVYPQ"
     gene            1895..5125
                     /locus_tag="ACFJCW_001989"
     CDS             1895..5125
                     /locus_tag="ACFJCW_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HFC4152045.1"
                     /translation="MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKL
                     GEQMARLPIDPKIARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHER
                     FTDKQSDFLTYLNIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQT
                     AIEMGLTTKEAAFRRPPEVKQLTSSENAGDQDLSAKLKQKQLDKKQHRTQIRATKEAG
                     YEQIHRALLTGLIANVGMKSPDSNDYTGARGSRFHLFPASALFKAKPKWVMAAELVET
                     TRLYARDVAVIQPEWIEQEAPHLVRYHYFEPHWEQKRGEVVASERVTLYGLAVLPRRP
                     VSYGKVAPEEAREIFIRSALVAQEYDLKADFFVHNKKLIKEITELEHKSRKQDVLVDD
                     EALFAFYHERLPDFYMADSVSEGLCPANPQQTTPSPVGEGWGEGKTVAAQTNFSATSA
                     SPLPNPLPQEREQSASVSTVSGSLKTMSCEARLNFCEAKTKTESSLHSQRLSENYTPP
                     FSDGLRPANPQQTTPSPVGEGWGEGKTVAAQTNFSATAANPLPQEREQSASALTVSDD
                     PKPKKQPASQKGRLKPLPLADIRTFEAWLKTAERDNPRLLFLSRDDLMQHAAAHITEE
                     QFPKHWQTADGKFKLSYRFEPHHPLDGVTLTLPLTVLNRISPAALEWLVPGMIREKIQ
                     LQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPILPQLAQAIAKTAGDIRILEQINQ
                     DEWAAFRLPEHCYFNLRIIDDGGQELAMGRDLIQIQQQLGKAATTTFRDNTQEFERDN
                     VTAWDIGILPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTSAAAGHAHRLGVIEL
                     MKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDKLPRNEK
                     AFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPG
                     FATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKTDGLAKQ
                     GQPVSDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKMWEILL"
BASE COUNT         1375 a         1544 c         1205 g         1014 t
ORIGIN      
        1 aaaaaatatg cggatactgt ctaaactcta aaaaataagg tcgggcattt atgtccgacc
       61 tacaaaacta tgcaaaacac taaaaatcaa gcacgcagct caggcattca tgcccaacac
      121 aatccgacaa atgacaaacc actttcagac aacctcgttt tttgaaaaac aatctgtaaa
      181 cagatagctg ctgaagaata ccgttgccga gccccaaaac ccgtcctgca acttttattg
      241 tgaactgccc attatgaaaa aaatcccttt tcgttctctt tctgtattca tccctactta
      301 ccgccagcga aatcgcctat cgctttgtat tcggaattga aaccctaccg gctgcaaaaa
      361 tggcggaaac gtttgcactg acatttgtga ttgctgcgct gtatctgttt gcgcgttata
      421 aggcaacgcg tttgttgatt gcggtgtttt tcgcgttcag cattattgcc aacaatgtgc
      481 attacgcggt ttatcaaagc tggatgacgg gtattaacta ttggctgatg ctgaaagagg
      541 ttaccgaagt cggcagcgcg ggcgcgtcga tgttggataa gttgtggctg cctgctttgt
      601 ggggcgtggc ggaagtcgtg ctgttttgca gccttgccaa gttccgccgt aagacgcatt
      661 tttctgccga tatcctgttt gccttcctaa tgctgatgat tttcgtgcgt tcgttcgaca
      721 cgaaacaaga gcacggtatt tcgcccaaac cgacatacag ccgcatcaaa gccaattatt
      781 tcagcttcgg ttattttgtc ggacgcgtgt tgccgtatca gttgtttgat ttaagcaaga
      841 tccctgtgtt caaacagcct gctccaagca aaatcgggca aggcagtatt caaaatatcg
      901 tcctgattat gggcgaaagc gaaagcgcgg cgcatttgaa attgtttggt tacgggcgcg
      961 aaacttcgcc gtttttaacc cggctgtcgc aagccgattt taagccgatt gtgaaacaaa
     1021 gttattccgc aggctttatg acggcagtat ccctgcccag tttctttaac gtcataccgc
     1081 acgccaacgg cttggaacaa atcagcggcg gcgataccaa tatgttccgc ctcgccaaag
     1141 agcagggcta tgaaacgtat ttttacagtg cccaggctga aaaccaaatg gcaattttga
     1201 acttaatcgg taagaaatgg atagaccatc tgattcagcc gacgcaactt ggctacggca
     1261 acggcgacaa tatgcccgat gagaagctgc tgccgttgtt cgacaaaatc aatttgcagc
     1321 agggcaggca ttttatcgtg ttgcaccaac gcggttcgca cgccccatac ggcgcattgt
     1381 tgcagcctca agataaagta ttcggcgaag ccgatattgc ggataagtac gacaacacca
     1441 tccacaaaac cgaccaaatg attcaaaccg tattcgagca gctgcaaaag cagcctgacg
     1501 gcaactggct gtttgcctat acctccgatc atggccagta tgtgcgccaa gatatctaca
     1561 atcaaggcac ggtgcagccc gacagctata ttgtgcctct ggttttgtac agcccggata
     1621 aggccgtgca acaggctgcc aaccaggctt ttgcgccttg cgagattgcc ttccatcagc
     1681 agctttcaac gttcctgatt cacacgttgg gctacgatat gccggtttca ggttgtcgcg
     1741 aaggctcggt aacaggcaac ctgattacgg gcgatgcagg cagcttgaac attcgcaacg
     1801 gcaaggcgga atatgtttat ccgcaataag cagcgtgaaa accaataaag acaaatttag
     1861 atgatgtcgg ggaagatgcc cgaccgacaa gactatgcaa aatatgaaaa accaagtacg
     1921 cggatcaggc atggatgccc gatccaaccc ggccaatgtt tcagacggcc tgcaaaacag
     1981 ttcgggccat atcggtacca acacgcgcta ccgcctgacc aagctcggcg aacaaatggc
     2041 gcgcctgccc atcgatccga aaattgcgcg cattttgctg gcggcgaaga aacacgactg
     2101 catggcggaa atattggtga ttgcgtctgc gctgtcgatt caagacccgc gcgaacggcc
     2161 gctggaagcg cgcgatgccg cggccaaggc gcatgaacgc tttaccgaca agcaatccga
     2221 tttccttacc tacctgaata tttgggacag tttccagcgc gagcgcgaca aaggtttgtc
     2281 caacaagcag ttggtgcaat ggtgccgtca atattttctg tcgcacctga ggatgcgcga
     2341 gtggcgcgag ctgcaccacc agcttgccca aaccgcgatt gaaatgggct tgaccaccaa
     2401 agaagctgcg tttagacgac ctcccgaagt caagcaactg acgtcgtctg agaatgcggg
     2461 cgaccaagac ctatctgcca aactcaaaca aaaacaactg gataagaaac aacaccgcac
     2521 ccaaatccgc gctaccaaag aagcgggcta cgaacaaatc caccgcgccc tgctcaccgg
     2581 cctcatcgcc aacgtcggca tgaaatcgcc cgacagcaac gactacaccg gcgcgcgcgg
     2641 cagccgcttc caccttttcc ccgcctccgc cctgttcaaa gccaagccca aatgggtgat
     2701 ggcggcagaa ttggttgaaa ccacgcgcct ttacgcgcgc gacgtcgccg ttatccagcc
     2761 cgaatggatc gagcaggaag ccccgcacct tgtccgctac cattatttcg agccgcactg
     2821 ggaacaaaaa cgcggcgaag tcgtcgccag cgaacgcgta acgctttacg gcctggccgt
     2881 attgccgcgc cgccccgtgt cttacggtaa agttgcgccc gaagaagcac gtgaaatctt
     2941 tatccgcagc gcgttggtgg cgcaggaata cgatttgaaa gcggattttt ttgtccacaa
     3001 caaaaagctg attaaagaaa ttaccgaact cgaacacaaa tcgcgcaagc aagacgtatt
     3061 ggtcgatgac gaagccctgt ttgcgtttta tcacgaacgg ctgcccgatt tttatatggc
     3121 ggattcggtt tcagagggcc tgtgtcctgc aaatccgcag caaaccaccc cctcccccgt
     3181 gggggaaggc tggggagagg gcaaaacagt tgccgcacaa accaactttt ccgcaacctc
     3241 agcaagccct ctccctaacc ctctcccaca ggagagggaa cagagtgcct cagtttcaac
     3301 ggtttcaggc agtctgaaaa caatgtcttg cgaagcaagg ctgaatttct gcgaagctaa
     3361 aactaaaacc gaaagcagcc tgcactccca aaggctatct gaaaactaca ccccgccatt
     3421 ttcagacggc ctgcgtcctg caaaccccca gcaaaccacc ccctcccccg tgggggaggg
     3481 ctggggagag ggcaaaacag ttgccgcaca aaccaacttt tccgcaaccg cagcaaaccc
     3541 tctcccacag gagagggaac agagtgcctc ggctttaaca gtttcagatg accccaaacc
     3601 caaaaagcag cctgcatctc aaaaaggccg tctgaaacct ttgccccttg ccgatatccg
     3661 cacctttgaa gcctggctca aaaccgccga gcgcgacaac ccgcgcctgt tgttcctcag
     3721 ccgcgacgac ctcatgcagc acgccgccgc gcacatcacc gaagaacaat tccccaaaca
     3781 ctggcagacc gcagacggca aattcaaact cagctaccgc ttcgagccgc accacccgct
     3841 cgacggcgtt accctcaccc tgccgctcac cgtgctcaac cgcatcagcc ccgccgccct
     3901 cgaatggctc gtgcccggca tgatacgcga aaaaatccag ctacaaatca aagcactgcc
     3961 caaacaaatc cgccgcatct gcgtacccgt acccgaattc atcacccaat ttttaagcca
     4021 aaaccccgac cgcaacgccc ccatcctgcc ccagctcgcc caagccatcg ccaaaaccgc
     4081 aggcgacatc cgcatactcg agcaaatcaa ccaagacgaa tgggccgcgt tcaggctgcc
     4141 cgaacactgc tatttcaacc tccgcatcat cgacgacggc ggacaagagt tagccatggg
     4201 tcgcgattta atccaaatcc aacaacaact tggcaaagcc gccaccacca ccttccgcga
     4261 caacacccaa gaattcgagc gtgacaacgt taccgcatgg gacatcggca tcctgcccga
     4321 atccatcaaa ttcgcccgcg gcaaacaaca gctcaccggc tacctcggcc tgcaaaaaga
     4381 aaaagacggc cgcatcgccc tgcgcctgtt cgacacgtct gccgccgccg gacacgccca
     4441 cagattaggc gtgattgaac tcatgaaact acaactaaaa gaacaagtta aagatctgaa
     4501 caaaggcatc caaggcttca cccaagccgc catgctgctc aaacacatca acgccgacac
     4561 cctgcgcgac gacctcaccc aagccgtctg cgaccgcgcc tttatcggcg aagacaagct
     4621 gccgcgcaac gaaaaagcct tcaaagaaca aatcaaacgc gcccgcagcc gcctgcccgc
     4681 cgtcaaagaa gccctcagcc gctacctgca ggaaaccgca gccgcctacg ccgaactgaa
     4741 cggcaaactc ggcaaacacc cattgaccca cctcctaaga ctacgcctgc aaaccctgct
     4801 tgcacccggc ttcgccaccc gcaccccgtg ggcacaatgg ccgcgcctcc ccatctacct
     4861 caaagccatg accctgcgcc tcgaaaaata cagcagcaac cccgcccgcg acgcagcccg
     4921 cgaagccgat atccaagagc tggaacaaat gtggcaggaa aaaactgacg gcttggcgaa
     4981 acaaggacag cccgtttcag acggcctcgc cgcgtttaaa tggatgattg aagaattgag
     5041 agtgtcgctg ttcgcgcagg agttgaagac gccgtatccg gtgtcggtaa agcggctgtt
     5101 gaagatgtgg gagatactac tttaattgac aacagcat
//
LOCUS       DAXGCP010000118         5107 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.119, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000118 DAXGCP010000000
VERSION     DAXGCP010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5107)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5107)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5107
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.119"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            96..1106
                     /gene="trpS"
                     /locus_tag="ACFJCW_001990"
     CDS             96..1106
                     /gene="trpS"
                     /locus_tag="ACFJCW_001990"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HFC4152046.1"
                     /translation="MSKKRVLTGVTTTGTPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEQEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFQELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETAEFTQVLADGLAWGEAK
                     KLLAAKINAELAELRERYNALTSNPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            1186..1731
                     /locus_tag="ACFJCW_001991"
     CDS             1186..1731
                     /locus_tag="ACFJCW_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152047.1"
                     /translation="MLKIPFAVLGGCLLLAACGKSENTAEQPQNAAQSAPKPVFKVKY
                     IDNTAIAGLALGQSSEGKTNDGKKQISYPIKGLPEQNAVRLTGKHPNDLEAVVGKCME
                     TDGKDAPSGWAENGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQ
                     NGRYVLEIDSEGAFYFRRRHY"
     gene            2048..2392
                     /locus_tag="ACFJCW_001992"
     CDS             2048..2392
                     /locus_tag="ACFJCW_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152048.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAAQAVESDVKDTAASAA
                     ESAASAAEEAKGQVKDAAADAKASAEEAVTEAKDAAAETKEAVSEAAKDTLNKAADAA
                     QEAADKMKDAAK"
     gene            complement(2602..4110)
                     /gene="ppx"
                     /locus_tag="ACFJCW_001993"
     CDS             complement(2602..4110)
                     /gene="ppx"
                     /locus_tag="ACFJCW_001993"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HFC4152049.1"
                     /translation="MTTNPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSTSSQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPCGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQAAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMGGIIGGNEMLWYAVLSLRLAALFCRSRQDLGFP
                     KNMQLRTDTESCGFILRIDSKWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(4274..5042)
                     /locus_tag="ACFJCW_001994"
                     /pseudo
     CDS             complement(4274..5042)
                     /locus_tag="ACFJCW_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146853.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
BASE COUNT         1208 a         1349 c         1409 g         1141 t
ORIGIN      
        1 aaaagtctgt tgtcggctgg atgtatgtgg caaatcgggt ataatcggcg catcttttcc
       61 ctttcagacg gcattgctgc cgtaaggaca tttttatgag caaaaaacga gttctgaccg
      121 gcgtaaccac caccggcacc ccgcatctgg gcaactacgt cggcgccatc cgccccgccg
      181 tccgcgcggc gcaaaacccc gataccgaat ccttcctctt cctcgccgat taccacggca
      241 tcatcaaatg ccacgagcag gagatgattc accaatccac ccaagccgtt gccgccactt
      301 ggcttgcctg cggactcgac cccgagcgca ccaccttcta ccgccaaagc gacattcccg
      361 aagtgatgga gttgaactgg attctgacct gcatcaccgc caagggtttg atgaaccgcg
      421 cccacgccta caaagccgcc gttcaagcca atgcggaaaa cgggcaggaa gaccccgatt
      481 tcggtgtgga aatgggtttg ttcagttatc cgattctgat gactgccgac attttgatgt
      541 tcaacgccaa cgaagtcccc gtcgggcgcg accaaatcca acacgtcgaa atggcgcgcg
      601 acattgccgg ccgcttcaac caccgtttcc aagaactctt caccctgccc gaagtgaaaa
      661 tcgacgaaaa cgtcgaactc ttggtcggtt tggacggacg caaaatgtcc aaatcctacg
      721 gcaataccat tccgctttgg gaaaacgaca aaaaaaccca aaaatcggtc aacaaaatca
      781 tcaccaacat gaaagagccg ggcgagccga aacagcccga cgaaagccct ttgtttgaaa
      841 tctataaagc cttctccacg ccgtctgaaa cggcggaatt tacgcaagtg cttgccgacg
      901 gcttggcttg gggcgaggcg aaaaaacttt tggcggcgaa aatcaacgcc gaactggcag
      961 aactgcgcga acgctacaac gcattgacct ctaatccttc gcaaatcgaa gagattttgc
     1021 aggcaggcgc gcaaaaagcg cgcaaagaag cgcgcgaatt gttggataaa gtacgcgatg
     1081 cggtcggcat ccgcccgttg aaataaaccc aatgccgtcc gaacctccgc ctgccacgtt
     1141 tcagacggca ttcagacggc attttgaaac catcaggagt gcggaatgct gaaaatacct
     1201 tttgccgtgt tgggcggctg cctgctgctt gccgcctgcg gcaaatccga aaatacggcg
     1261 gaacagccgc aaaatgcggc acaaagcgcg ccgaaaccgg ttttcaaagt caaatacatc
     1321 gacaatacgg cgattgccgg tttggctttg ggacaaagta gcgaaggcaa aaccaacgac
     1381 ggcaaaaaac aaatcagtta tccgattaaa ggcttgccgg aacaaaacgc cgtccggctg
     1441 accggaaagc atcccaacga cttggaagcc gtcgtcggca aatgtatgga aaccgacgga
     1501 aaggacgcgc cttcgggctg ggcggaaaac ggcgtgtgcc ataccttgtt tgccaaactg
     1561 gtgggcaata tcgccgaaga cggcggcaaa ctgacggatt acctgatttc gcattccgcc
     1621 ctgcaaccct atcaggcagg caaaagcggc tatgccgccg tgcagaacgg acgctatgtg
     1681 ctggaaatcg acagcgaggg ggcgttttat ttccgccgcc gccattattg agttattcgg
     1741 acatcacgga atatatttgg atttttcaaa ccttgcggaa aaagtccgcg ccgccgggaa
     1801 actcaaaagg aggggatgtg tgttacaatt ttccgaactg ttttcataaa atagttttcg
     1861 gacgtgtttc aatatggcat tgatgccgcc ttgttgttcg agaaaaaacc ctttatattt
     1921 aatataatgg gttttaacta aacgggaaac cgttttctct ccggccgatg ggcaaaatca
     1981 gccgattgat ggaacacggt ccggttttta agcaaaacct taatcaacaa ctcaagaagg
     2041 ataagacatg aaaaaattat tgattgccgc aatgatggcg gctgccttgg cagcttgttc
     2101 gcaagaagcc aaacaggagg ttaaagaagc ggcccaagcc gttgagtccg atgttaaaga
     2161 cactgcggct tctgccgccg agtctgccgc ttctgccgcc gaagaagcga aaggccaagt
     2221 caaagatgct gcggctgatg caaaggcaag tgccgaggaa gctgtaactg aagccaaaga
     2281 cgcggcagcc gaaaccaaag aagcggtaag cgaagcggct aaagacactt tgaacaaagc
     2341 tgccgacgcg gctcaggaag cggcagacaa aatgaaagac gccgccaaat aatttgttgc
     2401 cttggcaaaa atgacgagat gccgcctgcc ggcaacccaa atgaaaccgc ctgaagattt
     2461 tcaggcggtt tttgagttgt atgccccttg ttttttacgc ctgcatgacc gtgcagggag
     2521 gatgtgccgc gcatatcggg atattgcgga cagggaaatg ccgtctgaac atcatttaga
     2581 cggcatttgg tttgtcaagg ttcagacggc ctcgactttg aacggcatat tgattttttg
     2641 ccattggacg ctttcatatt ccaatgcgtc ggcaatcagg gggtggcgtt ccagccattt
     2701 actgtcaata cgcaggatga agccgcagct ttccgtatcc gtacgcaact gcatattttt
     2761 cgggaaaccc agatcttggc gcgaacggca gaacagggcg gcaaggcgca gggacaaaac
     2821 ggcataccac aacatttcgt tgccgccgat aatgccgccc atttttttca tatcgccgcg
     2881 atgaccgatg accagttggg caagtatggt ctgttccttg cgtgaaaaac ccggcatatc
     2941 ggcgttttcg aggatgtagg cggaatgctt gtgatagccg gtgtgggcga tgtccaaacc
     3001 gatttcatgc agcgcggcgg cgcgtccgag atactgttgc cacaaggcaa gttcttgaac
     3061 cgtaacgttt ttggcatgac agaggctgtc cataaaggtt tgcgcggtct cggcggtgcg
     3121 tttcgcctga ttgaggctga cgtggtagcg gtgttggaac tcggcaaccg tttgtccgcg
     3181 catatcttcg tttaagccgc gcccgatcaa atcgtaaaac acgccgtcgc gcagggcggc
     3241 ttcggttacg gtcatcctgt cgagtttcat ttcctcaaac gccgccatca tcacggcaag
     3301 tccgccggca aaaacttcga tgcgttccgg tttcaggttt tcaaatttgg cttttttgac
     3361 cgaaccggct tcgatgatgc gttcggcgag ggcgcgcatt cccttgtagg taatgtccgc
     3421 ctcttggggc atttcggcgg caagcacgtc gcggatggat tttgccgaac ccgatgtgcc
     3481 gacggcgaaa tcccaacctt cgcgcctcat atttttgctg atgcgctgga tttcgttgcg
     3541 ggcggcggaa atggcggctt ggaagtcttt ggcggtgatt ttgttttgga agaagcgcag
     3601 gctgtaggtt acgcagccca agggcaggct ttcggtaatg tcgggattca gcgtcgaacc
     3661 gatgacaaat tctgtcgaac cgccgccgat gtcgataacc agcattttgc ccccgcaggg
     3721 ggggagggtg tggatcacgc cggtataaat cagccgcgcc tcttcgcgcc cggcgatgat
     3781 ttcgatgggg aaacccagtg ccgcttcggc cttgggaagg aaatctgcga tgtttttggc
     3841 gacgcggaat gtattggttg ccacggcgcg cacctgctcg gggcggaagc cgcgcaggcg
     3901 ttcgccgaat tttgccaggc agtccaaagc ctgttcctgc gaggatgtgc tgaggttttt
     3961 ctgttcgtcc agaccggcgg caaaacggac catctgtttg aaggaatcga tgacttttaa
     4021 ttgtccgttg ttgttttcgc aaatctggag gcggaaactg ttggaaccca aatcgacgga
     4081 ggcgaggacg tttgcgggat tggtggtcat ggcggatacc ggtgggggga aaaacgcaat
     4141 gttactctga cggcgcaggc gttgacaata aatgatgcgg ctgtttttga ttctgctcac
     4201 ggatgttgcc gacggtatgt ttccgacagc aaaaaatgcc gtctgaaaaa cgttcggacg
     4261 gcattttttg cgcttatttg aaatcctttt ccacgctcat gaaaatctgc gtgtttttgc
     4321 gtgtgtaaaa acttttcata ttgctgccga ttttcagata gcggaaattg agttgcggcg
     4381 taaagccctt ccaagagatt ttgtcgtgcc gcaacgacag gtttgcctga tattcgtggt
     4441 ctttgcgcgg gaagcggtac acaatatgtc ccgggtgcat caaaagtcct gcgggtatag
     4501 cgcaggtttg cccgcagccc caagccgccg tcgaacgttt tgaccgcgcc gacacgcaaa
     4561 cccttgcgga cggaagcctg ttccgcctct ttcgtcatgt cgtgcggcca gtccgcaccg
     4621 ccgtaaagca gccggtcttt cggcgcggga tacatcagcg tcgcgcccgc cagcggcata
     4681 tggctgccgt atcgggcggc ggtgcggtct tcctgataat gcttccacat attgcccgcg
     4741 ttcagcgtca gccgccagcg ttcgcccaag cgtcgggaga aatcggcatt gaagccgccg
     4801 gcgaaattgt atcggctgcc gcccaagagg ttttgcccga caaacggcac ggtgccgaac
     4861 gagcgcgtta ccgaacggtt ttgatggccg aacgacaggc gcaggctctg ttcgctgaaa
     4921 tctttgttat cccaataatg cacgccgccg ctgatgccgc cgtagaggaa atgatgcccg
     4981 cccgcattga tttcgcgcga cacgcccaag ccgtagcgca aaccgtgtgc cttttgcggc
     5041 aggctgtcgg cggttttcgt ccagcttctg cccgcaaatt caatcgtttt ttcggacgaa
     5101 gcgttgt
//
LOCUS       DAXGCP010000119         5063 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.120, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000119 DAXGCP010000000
VERSION     DAXGCP010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5063)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5063)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5063
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.120"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            92..226
                     /locus_tag="ACFJCW_001995"
     CDS             92..226
                     /locus_tag="ACFJCW_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152050.1"
                     /translation="MPSERIFRSVLRLVGVSSDTVKRKFAGAGLSYAGKAAGESLYCL
                     "
     gene            342..1136
                     /locus_tag="ACFJCW_001996"
     CDS             342..1136
                     /locus_tag="ACFJCW_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HFC4152051.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYDLPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQVVAVSCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELVEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDTGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWEAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWAEFVQAWK"
     gene            1361..3964
                     /gene="pepN"
                     /locus_tag="ACFJCW_001997"
     CDS             1361..3964
                     /gene="pepN"
                     /locus_tag="ACFJCW_001997"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HFC4152052.1"
                     /translation="MSKTVRYLKDYQTPAYRILETELHFDIAEPQTVVKSRLTVEPQR
                     AGEPLVLDGSAKLLSVKINGAAADYVLEGETLTIADVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GEFSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVVGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRAGRA
                     VRRIENIRLLRQNQFPEDAGPTAHPVRPVSYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLMT
                     EAEQAFPLEGVTEAVVPSLLRGFSAPVYLNYPYSDDDLLLLLAHDSDAFTCWEAAQTL
                     YRRAVAANLAALSDGIGLPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGT
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELDRQAAKQENQSYEYSPETADWRTLRNVC
                     RAFVLRADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNCLLAQFADKFSDD
                     ALVMDKYFALIGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAQD
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQELQCIRAQEGLSK
                     DVGEIVGKILG"
     gene            4026..4679
                     /locus_tag="ACFJCW_001998"
     CDS             4026..4679
                     /locus_tag="ACFJCW_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4152053.1"
                     /translation="MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFY
                     RKIRTVTNHRLALAADEVFEGPAGPGGSCFGGRRKGRRGRGAAGKAVVFGIPKRNGRA
                     YTVAADDAEPETLPPAVKKKIMPDGIVYADSPGSRGKSDAGGFTRCRINRSKEFADRR
                     NHINGIGSFWNQAKRALRKYNGIDRKPFPPLLRECEFRLNSGTPSRQLKILRDRCGI"
     gene            complement(4813..5004)
                     /locus_tag="ACFJCW_001999"
     CDS             complement(4813..5004)
                     /locus_tag="ACFJCW_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152054.1"
                     /translation="MLPACSVSSLLLGEYLEFEENGTKIAAEIGSAWHFLGAACRISI
                     NGKYYAGNRIVWFAKKAES"
BASE COUNT         1249 a         1387 c         1350 g         1077 t
ORIGIN      
        1 gcatttttat tcccctgttt taaaaaatat ttggcaaggt gtgaaaaaag gcgtacattc
       61 cgctacacag aattacagat acagcggagc aatgccgtct gaaaggattt tccggtcagt
      121 cttgcggttg gtcggggttt catcggatac ggtgaaacga aagtttgccg gcgcagggtt
      181 gagctacgcg ggtaaagccg caggcgaaag cctgtattgt ttgtgaagcg taaatctctg
      241 atttgaggta ttggggcaat cctgtggggg ttgcctcttt ttttatccgc cttttaatga
      301 cacaataggc gcaagtctgt ttttgaatgc aaggtactgc catgaatacg attttggctt
      361 tcgatattga aaccgtaccc gatgtgcagg gtatccgtac gttgtatgac ttgccgtctt
      421 ccctgccgga tgacgaagtg gtgctgttcg cgcagcagaa acgccgcgca cagaccggcg
      481 gcgattttat gcagcaccac ctccatcagg ttgtggcggt ttcctgctgt atgcgctggg
      541 ggcaggacaa ggttcatgtc ggcaccatcg gcgagatgga cgatggcgaa gaagtcgtga
      601 ttgccaagtt tttcgaattg gttgaaaaac atacgccgca actggtcagc tggaacggcg
      661 gcggtttcga cctgcccgta ctgcattacc gctccctgat atacggcatc aacgccgcgc
      721 gctattggga tacgggcgac ggcgattttg gcgacagccg cgatttcaag tggaacaact
      781 acatcagccg ttatcaccaa cgccactgcg atttgatgga tttgctcgcg ctttaccagc
      841 cgagggcgaa tgtgccgctg gacgatatgg cgaaactgtg cggctttccg ggcaagctgg
      901 gtatggacgg cagcaaggtg tgggaggcgt tccacgcggg caggctgaag gaaatccgca
      961 attattgcga aaccgatgcc gtgaatacgt atttgatgta tctgcgtttc tgtctggtca
     1021 gcggcagatt cgacgcggac gaatacgaaa tggaaatcaa gcggatcaga aactatctct
     1081 ccgcccaaac agaagacaaa ccgcattggg cagaatttgt ccaagcgtgg aaatagaaac
     1141 ctgctgtccg aaggcggtac gcttgtgccg ccgtttcggt ttcagacggc gtatggtgga
     1201 ttaaattcaa accggtacag ccttgcctct ccttgcctta ctatctgtac tgtctgcggc
     1261 ttcgtcgcct tgtcctgatt tttgttaatc cgctttaaaa gctgtatccg tgccgtctga
     1321 agccttttcc agtcaaacca aacaatattg aaagaaaaaa atgagcaaaa ccgtccgtta
     1381 tctgaaagat taccaaacgc ctgcctaccg cattcttgaa accgaactgc atttcgacat
     1441 tgccgaaccg caaaccgtcg tgaagtcgcg tttgacggtc gagccgcaga gggcgggcga
     1501 gccgctggtg ttggacggtt cggcaaaact tttgtccgtc aaaatcaacg gcgcggcggc
     1561 ggattatgtg ttggaaggcg agacgctgac gattgcagac gtaccgtccg aacgcttcac
     1621 cgtcgaagtg gaaaccgaaa tcctgccggc ggaaaacaaa tcgctgatgg ggctgtatgc
     1681 ttccggcggc aatctgttta cccagtgcga gccggagggc ttccgcaaaa tcacgttcta
     1741 catcgaccgt ccggatgtga tgtccaagtt cacgaccacc atcgtcgcgg acaaaaaacg
     1801 ctatcccgtt ttgctttcca acggcaacaa aatcgacggc ggcgagtttt cagacggccg
     1861 ccattgggtg aaatgggaag acccgtttgc caaaccgagt tatctgtttg ctttggtcgc
     1921 gggcgatttg gcggtaacgg aagaccgttt caccaccatg agcggcagaa acgtcaaaat
     1981 cgagttttac accaccgaag cggacaagcc caaggtcggc tttgccgtgg aatcgttgaa
     2041 aaacgcgatg aagtgggacg aaacgcgctt cgggttggaa tatgacttgg atattttcat
     2101 ggtcgtcgcc gtaggcgatt tcaatatggg cgcgatggaa aacaagggtt tgaacatttt
     2161 taacaccaag ttcgtcctcg ccgacagccg caccgccacc gataccgatt tcgaaggcat
     2221 tgaatccgtg gtcggacacg aatatttcca caactggacg ggcaaccgcg taacctgccg
     2281 cgactggttc cagctttcgc tgaaggaagg gctgaccgtg ttccgcgacc aagagttttc
     2341 cggcgaccgc gccggccgcg ccgtgcgccg catcgagaac atccgcctgc tgcgccagaa
     2401 ccagttcccc gaagacgcag gcccgaccgc ccatccggtg cgccccgtca gctatgagga
     2461 gatgaacaat ttctacacca tgaccgttta tgaaaaaggc gcggaagtgg tgcggatgta
     2521 tcataccctg ctcggcgaag agggcttcca aaaaggcatg aagctatatt tccaacgcca
     2581 cgacggacag gcagtgacct gcgacgattt ccgcgcggcg atggcggatg cgaacggcat
     2641 caatctcgac cagttcgcct tgtggtacag ccaggcgggc acgcccgttt tggaagccga
     2701 aggccgtctg aaaaacaatg ttttcgagtt aaccattaaa caaaccgtgc cgcccacgcc
     2761 cgatatggcg gacaaacagc cgatgatgat tcccgtcaaa gtcgggcttc tgaaccgcaa
     2821 cggcgaagcg gtggcattcg attatcaggg caaacgcgca accgaagccg tgttgctgat
     2881 gaccgaagcc gaacaggcct tcccgctcga aggtgtaacc gaagccgtcg ttccctcgct
     2941 gctgcgcggg ttcagcgcgc cagtgtatct gaactatccg tacagcgacg acgacctgct
     3001 gctcctgctc gcccacgaca gcgacgcttt cacgtgctgg gaagccgccc aaacgctcta
     3061 ccgtcgcgcc gtcgccgcca accttgccgc gctttcagac ggcatcgggt tgccgaaaca
     3121 cgaaaaactg cttgccgccg tcgaaaaagt catttcagac gacctcttgg acaacgcctt
     3181 caaagccctg cttttgggcg tgccgtccga agccgaactg tgggacggca cggaaaacat
     3241 cgacccgctg cgctaccatc aggcgcgcga agccttgttg gatacgcttg ccgtccgctt
     3301 cctgccgaaa tggcacgaat tggaccgtca ggcggcgaag caggaaaacc aaagttacga
     3361 atacagcccc gaaaccgccg actggcgcac gctgcgcaac gtctgccgcg ccttcgtcct
     3421 gcgcgccgac cccgcgcaca tcgaaactgt tgccgaaaaa tacggcgaaa tggcgcaaaa
     3481 catgacccac gaatggggca tcctgtccgc cgtcaacggc aacgaaagcg atacgcgcaa
     3541 ctgcctgctg gcgcagtttg ccgacaagtt ttcagacgac gcgctggtga tggacaaata
     3601 tttcgccctt atcggctcaa gccgccgcag cgacaccctg caacaggttc aaaccgcctt
     3661 gcagcatccg aaattcagtc tcgaaaaccc caacaaagcc cgttcgctca tcggcagctt
     3721 cagccgcaac gtcccgcatt ttcacgcaca agacggcagc ggctaccgct tcatcgccga
     3781 caaagtcatc gaaatcgacc gcttcaaccc gcaggtcgcc gcccgcctgg tgcaggcgtt
     3841 caacctctgc aacaagctcg agccgcaccg caaaaacttg gtgaaacaag aattgcagtg
     3901 cattcgggcg caggaaggat tgtcgaaaga cgtgggcgaa atcgtcggca agattttggg
     3961 ttgaggcagt caaacagaaa aaacaagggt ctgtaccaga ttagcagata tgttgccctc
     4021 gaaatatgaa gataacacac tgcaaattaa agaaagaagt acaaaaagaa ccgctccgtt
     4081 cttttgtacc ggaagttacc gcccgttctg ccgccgatat tttgggtatc catcccgatt
     4141 cggcggcact gttttaccgt aaaatccgca cggttaccaa ccatcgtttg gccttggctg
     4201 ccgatgaggt tttcgagggc cccgccgggc cgggcggaag ctgtttcggc gggcggcgta
     4261 aaggcagacg cggtcgcggc gcggcaggaa aagcggttgt cttcggcatt ccgaaacgca
     4321 acgggcgggc ctataccgtt gccgcggacg atgccgagcc tgaaacgttg ccccctgccg
     4381 tcaaaaagaa aatcatgccg gacggtattg tttatgccga tagcccgggc agccgcggca
     4441 agtcggacgc gggcggtttt acccgttgcc gcatcaaccg ttccaaggaa tttgcagacc
     4501 gtcggaacca cattaacggc attgggagct tttggaatca ggcaaaacgc gccttgcgga
     4561 aatacaacgg aatcgatcgt aaacctttcc cgccgttgtt gagggaatgc gaatttcgac
     4621 ttaactccgg cacaccgtcc cggcagctaa aaatcctgcg ggatcggtgt ggaatttagg
     4681 gataatctag tacagcccct aagataaaga aacggcaaca cacgccaaca gaaaaacata
     4741 tttgaacttc atcatatttt ccacataaaa ggcagcctga aaatctttca ggctgccctt
     4801 gtcaaattat tcctagcttt cggctttttt ggcaaaccaa acaatccgat tacccgcata
     4861 atactttcca tttattgaaa tccgacaagc cgcgcccaaa aaatgccatg cactgccgat
     4921 ttccgcagca atctttgtac cgttttcttc aaattccaaa tattcaccca ataataaact
     4981 tgaaacagaa cacgcgggca gcaagtgccc accctacgct tattcaaata atttgattaa
     5041 ataaagaata aagaaaaggc atc
//
LOCUS       DAXGCP010000120         4747 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.121, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000120 DAXGCP010000000
VERSION     DAXGCP010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4747)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4747)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4747
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.121"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            671..1075
                     /locus_tag="ACFJCW_002000"
     CDS             671..1075
                     /locus_tag="ACFJCW_002000"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HFC4152055.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWHG
                     HIAEITDLSAAERGELMEMVYKVEAAMRQVFRPAKINLASLGNVVPHLHWHIIARFEN
                     DATFPAPIWANPVRKHGMTLPQNWTEQLKKLL"
     gene            1115..2296
                     /locus_tag="ACFJCW_002001"
     CDS             1115..2296
                     /locus_tag="ACFJCW_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HFC4152056.1"
                     /translation="MTEPTSRRRFLKTCTAAGAGLLQACGTSATSVPPLPSSHSVVKA
                     RTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRFQ
                     RFAGTDAQRAADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGTL
                     FFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGTTQNRLTVDV
                     PYIQRADVETEGTLWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNTL
                     YLSGILGKQRAIVFGDFRMEKIRDLYDSSYDFSAVAKHISRTAKIPVLTGFPFGHIAD
                     KITFPLGAHTRIRMNGNGGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADIS
                     E"
     gene            complement(2399..4654)
                     /locus_tag="ACFJCW_002002"
     CDS             complement(2399..4654)
                     /locus_tag="ACFJCW_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HFC4152057.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQTTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     AYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPKLQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPGEVFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNARFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAPDLIFIGGAICVAI
                     QATKIVFGRDK"
BASE COUNT         1185 a         1306 c         1235 g         1021 t
ORIGIN      
        1 tgcgaatcct caaaaacggg caaaaaaaaa gccctgttac ttgtagaaag taaagggcgt
       61 taatttttgt taatcgcccc ttcttaggga cgcaatatat aaggtttcag acggcattgt
      121 tctcccgccg tcattcccgc gcaggcggga atccggaacg taaaatctaa agaaaccgtt
      181 ttatccgata agtttccgtg ccgacaggcc cggattcccg cctgcgcggg aatgacggga
      241 ttttaggttt ctgattttgg ttttctgttt ttgaggaaat gacgggattt tagtaaccgt
      301 aacaactgcc tgcgcgacgg ctaaggggct tcagcaaccg tagcaactgc ctgtgtggga
      361 atgacggaca atgggcttca gacggcatct cttgccttcc gctaaaacag tttgccgcac
      421 aactgttcaa acgcgtccga tatgtttcaa cacacaggac gacacataaa gcaccgccct
      481 atatgtcgtc ctgattcgga aggggttacg cccctcccaa acaaagtctg atcctgccgc
      541 cctaaagggc ggggtttcaa ccgaaaagga aacacgatga agtggtacaa ttaacggcaa
      601 tgcggacaga caaattaaac tatcagaaat tgccctaccg ttttttaaac actttcagga
      661 ataaggaaaa atgaccgccc aaccctgccc catctgcacg gcacaagatg aagatatttt
      721 gctgcaaacc cccaagctgc gcgtcatcgc cgtccataac gacagcggtt cgccggcatt
      781 ctgccgcgtc atttggcacg gacacattgc cgaaattacc gacctttcgg cagcggaacg
      841 cggcgaattg atggaaatgg tgtacaaagt cgaagccgct atgcgccaag tgttccggcc
      901 ggcaaaaatc aacctcgcca gcttgggcaa tgtcgtgccg cacctgcatt ggcatattat
      961 cgcccgcttt gaaaacgatg cgactttccc tgcgccgatt tgggcaaacc ccgtccgaaa
     1021 acacggtatg accctgccgc aaaattggac ggaacagctt aaaaagctgc tttaaacccg
     1081 ccgatgccgt ctgaaaccgt atgaaaggga aattatgacc gaaccgacct cccgccgccg
     1141 ttttctgaaa acctgcaccg ccgccggcgc ggggctgctt caggcttgcg gcacatccgc
     1201 cacatccgtt ccgccccttc cctcttccca ttccgttgtg aaagcccgaa ccgtgcctct
     1261 ccaaacgcca cgccgtcaaa gttcggacgg caaccttctg cgcgttgtcg cttcgtcagg
     1321 atttgccgaa gacaccaacc gcgtcaacac agccttaacc cgcctttaca atgccggttt
     1381 taccgtaacc aaccaacagg cgggcagccg ccgtttccaa cggtttgccg gcacggacgc
     1441 gcaacgcgcg gcagatttcc aagaggtcgc ctccggccgc gtcgccacgc ctaaagtgct
     1501 gatgggcttg cgcggcggtt acggtgcggc gcggattctg ccgcatatcg attttgcctc
     1561 gctcggcgca aggatgcgcg aacacggcac gctgtttttc ggattcagcg acgtatgcgc
     1621 cgtccaactg gcattgttgg caaaaggcaa tatgatgagt tttgccggcc cgatggctta
     1681 tagcgatttt ggcaaacctg cccccggtgc gtttacgatg gatgccttta tcaaggggac
     1741 aacccaaaac cgcctgaccg ttgatgttcc ttatatccaa cgcgccgatg tcgaaaccga
     1801 aggcacgttg tggggcggca acttaagcgt cctcgcctcg ctcgccggta cgccttatat
     1861 gcccgacatc gacggcggca ttttgttcct cgaagatgtc ggcgaacagc cctaccgcat
     1921 cgaacgtatg ctcaatacgc tgtatctttc gggtattttg ggcaaacagc gcgccatcgt
     1981 gttcggcgat ttccgtatgg aaaaaattcg agatctctat gattcgtctt atgatttttc
     2041 cgccgttgcc aagcatattt cgcgcacggc gaaaatcccc gtgctgacgg gcttcccgtt
     2101 cggacacatt gccgacaaaa tcactttccc tctgggcgcg cacacccgaa tccgtatgaa
     2161 cggaaacggc ggctattcgg tcgcgtttga aggctacccc acactcgatg cgtccgccct
     2221 gactttggat accctgctcc caccgccgga tttgcctatc ttccccgaaa gcggtgttgc
     2281 cgatatttcg gaataaaccc gcaaacggac aaatgccgtc tgaagccttc agacggcatt
     2341 ttcctgtaaa aaaaaccgca cctgatggca ggtgcggttt ccattttcag gctaaaactt
     2401 atttgtcgcg gccgaatacg attttagtgg cttggatggc aacgcagatt gcaccgccga
     2461 taaagattaa gtcgggggca gtgcgtaccc agcgcagggt gtcgaggatt tccatttgca
     2521 ggaattcttc gctgcgggca taccacaaac cgtgcgtgat agaggcgtat gcctgaatca
     2581 cgccgacagg cagcaggctg atggcaatca taccgaccaa gccgccgttg agcagccaga
     2641 agccccaagt catcagtttg tcgtcaaacc gcgcgttcgg tttcaagtag cgcgcaacca
     2701 acaatacgaa gcccaatgcc aagaaaccgt acacaccgaa caaggcggcg tgcgcgtgaa
     2761 cggcggaagt gttcaaacct tggatataga acagggaaat cggcggattg atcagaaagc
     2821 cgaatacgcc ggcaccgatc atattccaaa aagcgactgc cacgaagcac attagcggcc
     2881 aacgcaggcg tttcgcccag tcggacaggt gttggtaaga ccagtgctcg tatgcctcgc
     2941 ggcccagcaa caccagcggc acgacttcca aagcggagaa gcaggcgccg attgccatag
     3001 aggcggaggt agagccggag aagtacaggt ggtgcagcgt gcccggaacg ccgcccaaca
     3061 taaagatggc ggcagcggcc aaagtggagg cagtggcggt actgcggcgg acaaagccca
     3121 tattgtagaa gacaaaggca aaggcggcag tggcaaatac ttcaaagaag ccttccaccc
     3181 acaggtggac cacccaccaa cgccagtatt ccattacggc aatcggggat ttttcgccat
     3241 agaacaggcc cggtgcgtag aacacgccca cgccgaccat agaagcgaca aagattgcca
     3301 gcaggttttt gtccacgcct ttttctttga aggcggaaac cgtgcagcgc aacatcagga
     3361 acagccacaa cagcagtccg accatcaaaa ggagttgcca gaaacgtccc aaatcgaggt
     3421 attcgtaacc ttggtgtccg aaccagaagt taaattcggg aggaaggatg tgcgtcaacg
     3481 cgaagaagtt gcccgcgtaa gaaccgccga ccacgatgaa gagggcgata tagaggaagt
     3541 tcacgcctgc acgttggaac ttgggatctt tgccgccgtt gacaatcggc gcgaggaaca
     3601 aacctgccgt caaaaagccg gttgcaatcc agaagatggc ggattggatg tgccaagtac
     3661 gggtcagggc atagggaaac cagtcggaca tttcaaagcc caacgcctcg tcaatgccgt
     3721 agaaaccctg accttcgacg gtgtagtgcg cggtcaggcc gcccagcaat acttgtacca
     3781 caaacagggc gaccgtcagg aagacgtatt tgcccaatgc tttttgcgaa ggggtcagtt
     3841 ggattttgga aatcgggtct tcagacggca cttccacttc ctcgtgtttg gtcaggaagg
     3901 aataacccca catcaacaaa ccgatgccca tcaagagcag tacgacactg gtaaacgacc
     3961 acatgtagtt ttcagtagtc ggtacattgt tgatcaaagg ctcgtgcggc cagttgttgg
     4021 tgtaggtaaa gacctcgccg ggacggttgg tcgaagcaga ccaagaagtc cagaagaaga
     4081 agtcgaacag tttttcacgc gcttcttggc ttggcaatgt gttgtttttc attgcaaagt
     4141 gttcgcgggt ggtttgcaac ttgggatcat cgccgtaaac gccgtgatag taaggcagga
     4201 tgctttcgat ggctttcacg cgcgtatcgc tgatgacgac gctgccgtct tctttaatac
     4261 ggctttgatt gcggtattca tcggccaagc gggttttcag aacggcttgt tcttcagggg
     4321 aaacttcatc gaattttttg ccgtaagcct gttgcgcggt caaatccaac caggcggaca
     4381 actcacgatg cagccagtcg gccgtccaat ccggagcctg atatgcgccg tgtcccagaa
     4441 tcgaaccgac ttccatgccg ccggtagtct gccacgcaga ctgacctgcc aaaatatcgt
     4501 ctttcgtcat cagcactttg ccggatgcgg aaacgacctg ttcggggtaa ggcggggctt
     4561 tcttataaac ctcgctgccc atatagccaa gaatggtaaa gcataccgcc agaacggcaa
     4621 acagcaagta ccacagcttc ttgtactgtc ccattttgag agctcctttt aataaatcag
     4681 ttgtttaaaa ttcacaaaat atgaatgtta aagattgtag catggtttac cgcgcaaata
     4741 aacattt
//
LOCUS       DAXGCP010000121         4715 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.122, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000121 DAXGCP010000000
VERSION     DAXGCP010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4715
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.122"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            284..1204
                     /gene="ribF"
                     /locus_tag="ACFJCW_002003"
     CDS             284..1204
                     /gene="ribF"
                     /locus_tag="ACFJCW_002003"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HFC4152058.1"
                     /translation="MKIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADT
                     RGLPVVAVVFEPQPKEFFALRTGKTPPCRISPLRTKLELLEGTGCVDAAWVLRFDRNF
                     SEISAQAFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVGGGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRRIEADMEAAKCW"
     gene            1346..4135
                     /gene="ileS"
                     /locus_tag="ACFJCW_002004"
     CDS             1346..4135
                     /gene="ileS"
                     /locus_tag="ACFJCW_002004"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HFC4152059.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLRET
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDNPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKNTVA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPKGKLVLAKDLAE
                     GALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYISETPRVAGMSVWEANPVILQWPEETGNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGSDGKTLRDKAIKAVDDTEFFPPWG
                     RARLESMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVAQRIEEKGIE
                     AWFSLDKSELLSAEDCEHYDKLPDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVPQA
                     EMVEIDRYALVLARQLQERVAGDFYPRYAFHFAVKEMVSFCSEDLGAFYLDILKDRLY
                     TTKADSRARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PAINEKAEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGDELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
BASE COUNT         1122 a         1294 c         1283 g         1016 t
ORIGIN      
        1 aaggtttttt gcgggctgga ttcattttcg gctccttata tcggtttgac cggttaaaaa
       61 aaagattttc actgatgttg aaaggcggat tatatcgggt tccgggcggt gtttcaatac
      121 atagcaccgc gcctgctgcg cgttttatgc gtttggcgcg ttcggcggcg ggaaatttgc
      181 ctacttttcc cgcgtcgggc gggcggaacg ggcggcacac tgtctataaa ccgcaatacc
      241 gtttacaatg accgcctgtt tcaccacata cccgaacgca acaatgaaaa tcaggctggg
      301 gcggcacaac gcgcccgact ttccgcacgg ggccgccgta accataggca atttcgacgg
      361 cgtgcacctc ggacacaaac acatcctcca aaaactccgc ctcgaagccg atacgcgcgg
      421 attacccgtc gtggccgtcg ttttcgaacc ccaacccaaa gaatttttcg cactccgtac
      481 cggcaaaacc ccgccctgcc gtatcagccc cctgcgtacc aaactggaat tgctggaagg
      541 gacgggttgc gtcgatgccg cctgggtttt gcgtttcgat cggaattttt ccgaaatatc
      601 cgcgcaagca tttatcgacc gcctgctgcg tcaaactttg aatacgcgct atttgctcgt
      661 cggcgatgat tttcgtttcg gcgcggggcg cgaaggctgt tttgaacttt tggcacaaca
      721 gcccgatatg caaaccgagc gcacgccttc cgtcatcgtc gaagacatcc gcaccagcag
      781 cacagccgtc cgccaagccc tttcagacgg caaccttgcc tatgcgaaga aacttttggg
      841 gcacgactac gttttggggg gcagggtggt gcacggcaga aaactcggac gcaccttaaa
      901 cgccccgacc gccaatatcc ggctgcccgg ccaccgttat gccctcggcg gcgtgttcgt
      961 cgtcgaggcg gacggcgcat tcggcacgcg gcgcggcgtg gcgagcttcg gcttcaatcc
     1021 gaccgtcggc ggcggctgtt ctcaaaagct tgaagtccac ctgttcgact ttcaaggcga
     1081 cctgtacgga caacggttga acgtccgctt cctgcacaaa ctgcgcgacg aggaaaagtt
     1141 tgacggtatg gaagaactga aaaggcggat tgaagccgat atggaagccg caaagtgttg
     1201 gtagaaaaac cttatacaaa ccatccgatt gggctacaat cagcctttta actgttcaga
     1261 cggcacaggg gtttcccgtt gtgaaatact gtttgaggcg caatgccgtc tgaaaccgaa
     1321 atattgtaac aatagagatt aaaaaatgac cgattacagt aaaaccgtca acctgctcga
     1381 aagcccgttt ccgatgcgcg gcaatcttgc caagcgcgag cctgcgtggc tgaaaagctg
     1441 gtacgagcaa aaacgttacc aaaaactgcg cgaaaccgcc aaaggccgtc cgaaattcat
     1501 cctgcacgac ggcccgccgt atgccaacgg cgacatccat atcggtcatg ccgtcaataa
     1561 aattcttaaa gacattatta tccgcagcaa aacccaagcc ggttttgacg cgccttatgt
     1621 accgggttgg gactgccacg gcctgcccat cgaagtgatg gtggaaaaac tgcacggcaa
     1681 agatatgcct aaagcccgtt tccgcgaatt gtgccgcgaa tatgccgccg aacagattgc
     1741 ccgtcagaaa aaagacttta tccgcttggg cgtgttgggc gactgggaca atccttactt
     1801 gaccatggat ttcaaaaccg aagccgatac cgtgcgtatg ctcggcgaaa tctacaaatc
     1861 cggctatctc taccggggcg cgaaaccggt tcagttttgc ttggattgcg gatcttcgct
     1921 ggcggaagcg gaagtggaat acaaagacaa agtatcgcct gcgattgacg ttgcctatcc
     1981 gtttaaaaac accgtcgcgc ttgccgccgc attcggcttg gcaggtatcg aaggcaaagc
     2041 gtttgccgtc atttggacga ccacgccttg gactttgcct gcgagccagg ccgtgtctgc
     2101 cggcgcggac gtggtgtatc aattaatcga tacgcccaaa ggcaaattgg tgctggcgaa
     2161 agatttggcg gaaggcgctt tgaaacgcta cggcttttca gacggcatcg ccatccttgc
     2221 cgaaaccacc ggcgacaagc tggaaaacct gcacatgaat catccgttcc tcgaacgcga
     2281 tattcccatg ctcaacggcg aacacgttac caccgatgcc ggtaccggct tggtgcatac
     2341 tgcgcctgcg cacggtttgg aagactacgc cgtctgcaat aaatacggca tcgagcttta
     2401 caaccctgtc aacgccgaag gcaaatacat aagcgaaacg cctcgtgtcg caggcatgag
     2461 cgtttgggag gcgaatcccg tcatcctgca atggccggaa gaaaccggca acctcttggc
     2521 aagcagcaaa atcgaacaca gctacgccca ctgctggcgc cacaaaaccc cgctgattta
     2581 ccgagcgaca ggtcagtggt ttgtcggcat ggacaaagcc ggcagcgacg gtaaaaccct
     2641 gcgcgacaaa gccatcaaag ccgtggacga caccgaattc ttcccgccat ggggtcgtgc
     2701 gcgtttggaa tccatgattg aaggccgtcc tgactgggtg gtttcacgcc aacgctattg
     2761 gggcacgccg atgactttct ttgttcacaa agaaaccggt gaattgcatc cgaactctgc
     2821 cgaacttttg gaaaaagtcg cgcaacgcat cgaagaaaaa ggcatcgagg cttggttctc
     2881 cctcgataaa agcgaattat taagcgcgga agattgcgaa cattacgaca aactccccga
     2941 taccatggac gtatggttcg actcaggctc gacgcattat tccgttgtaa aacaacgcga
     3001 agaattggaa tggccggctg acttgtacct cgaaggcagc gaccaacacc gcggctggtt
     3061 ccaatcttct atgctgaccg gttgcgcctc atccatggga cgcgcaccgt ataaacagct
     3121 gctgacccac ggtttcgttg tggacggcga aggcaaaaaa atgtcgaaat ccatcggcaa
     3181 cgtcgtcgcg ccgcaggaag tgtataacga gttcggcgcg gacatcctgc gtctgtgggc
     3241 ggcatccacc gattacagcg gcgaattggc gatttccaaa gaaatcctca aacgcgtaac
     3301 cgaaagctac cgccgtatcc gcaatacctt gagcttcctg tttgccaatt tgagcgactt
     3361 taatccgatt gaagatgctg ttccacaagc agaaatggtg gaaatcgacc gctacgccct
     3421 ggtgttggcg cgtcaacttc aagaacgcgt tgccggcgat ttttatccgc gttacgcctt
     3481 ccattttgcc gtaaaagaaa tggtttcttt ctgctcggaa gacttgggcg cgttctacct
     3541 cgacatcctg aaagaccgcc tctacaccac caaagccgac agccgcgccc gccgcagcgc
     3601 gcaaaccgcc ctgtaccaca tcacgcgcag cctggttctc ttgattgcac cgattttgtg
     3661 cttcaccggc gaagaagcgt gggacatcat cggcggcggc gaagaagaca gcgtcctctt
     3721 ccatacttgg cacgagttcc cggccatcaa cgaaaaagcc gaagccgaac tggtgaaaaa
     3781 atggacggca atccgcgaag cgcgcgaagc agtaaccgcc gccatcgagc ctttgcgcgc
     3841 cgacaaaacc gtcggttcgt ccttgcaggc ggaagccgaa atcaccgccc cggaagaaat
     3901 ggccggctat ctgaatgctt tgggcgaaga attgcgcttt gccctgctgg tgtctaaagc
     3961 agaagtgaaa gtcggtgatg aacttgccgt tgccgccaaa gccagcgacg gcgaaaaatg
     4021 cgaacgctgc tggcattaca cccgcgatgt gggcgcggtt gcaggttatg aaaccgtctg
     4081 caaacgctgt gcggagaatg tcggcggaga aggcgaaacg cgccattacg cctgataaag
     4141 tttgagcaaa tgccgtctga aaccgccaaa cagtatttca gacggcattt tttgtgccgc
     4201 gatttgtctt cataatggcg gaggggtttt aagattacgg tattgtcggg aatgacggtt
     4261 cagttgctac ggttactgtc aggtttcggt tatgttggaa tttcgggaaa cttatgaatt
     4321 gtcattcccg cgaaagtggg aatctagaat ctcggggttt cagtcatttc cgatagattc
     4381 ccgccgcgtc gggggtccgg attcccgcct gcgcgggaat gacgaatttc gagattgcgg
     4441 tattgtcgga cgggtttcga gactacggtg ttgtcggaac gcaaccgaac cgtcattccc
     4501 acggaagtgg gaatctagga cgcggggttt gggcaactgt ttttatccga taagtttccg
     4561 tgcggacagg tccggattcc cgcctgcgcg ggaatgacgg gtttcgagat tgcggtgttg
     4621 tcggaacgca accgaaccgt cattcccacg gaagtgggaa tctaggacgc ggggtttcag
     4681 tcatttccga tagattcccg ccgcgtcggg ggtcc
//
LOCUS       DAXGCP010000122         4637 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.123, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000122 DAXGCP010000000
VERSION     DAXGCP010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4637
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.123"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(149..571)
                     /locus_tag="ACFJCW_002005"
     CDS             complement(149..571)
                     /locus_tag="ACFJCW_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HFC4152060.1"
                     /translation="MTDIFTPSKRSFVMSKIHSKETKPEVLVRKFLFSQGFRYRKNDK
                     RYAGKPDIVLPKYKTVVFIHGCFWHGHSCNKGHIPKSNMDFWLEKITKNRERDIKNET
                     ELEKIGFKVIVVWECELKNKAICRERLNRLVEEIKDAV"
     gene            complement(577..1173)
                     /locus_tag="ACFJCW_002006"
     CDS             complement(577..1173)
                     /locus_tag="ACFJCW_002006"
                     /inference="COORDINATES: protein motif:HMM:TIGR02391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02391 family protein"
                     /protein_id="HFC4152061.1"
                     /translation="MKGESGVDIENWKNKLPEKEREPVEVILNRLEDSELTNKEQAEV
                     ISALHSIIPEYPYYHWRHLHQDLHTACNDFYNEKKDYLSAAIEAVKVFEDKVQKQTGL
                     HSIDGRELIEKAFGSKKSMLLLTNNKTQAEQNLEDGLEQLACGTWTGFRNPVQHELRA
                     NLSPSIFNDKDALDLISLVSYLLRKVEQTKKRAKPTSP"
     gene            complement(1363..2220)
                     /locus_tag="ACFJCW_002007"
     CDS             complement(1363..2220)
                     /locus_tag="ACFJCW_002007"
                     /inference="COORDINATES: protein motif:HMM:NF024977.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC4152062.1"
                     /translation="MSEEKLKMSFEPTVIEHLGVKMYSHTVPAIAELIANAYDACATE
                     VEVRLFDKPEHKIVIKDNGIGMSFDEINDFYLRIGRNRREEKQASPCGRIPTGKKGLG
                     KLALFRLGNKIEISTIQGNERVTFTLDYAEIKKSERIYQPEFQKESVKPNTENGTTIT
                     LTELTKKQGYPLDNYVGHLSRLFDFPAQDFKIKVSLNGSEPRIIDGNLKYNLVTPQFE
                     WEYQDLATNISSLSSKFEQYEYSGLIQGKFITTEKPLKNNMKGITLFANGRMVNMPEF
                     FTDSESSHF"
     gene            complement(2234..2668)
                     /locus_tag="ACFJCW_002008"
     CDS             complement(2234..2668)
                     /locus_tag="ACFJCW_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4152063.1"
                     /translation="MAGHQDETDFMHSCAGLSDINLKRLALIPKNGGNRLAFAHIPEL
                     QLECFIGKDNSFKDTFGRLWWDKPAPTITTKFFSISNGRFAHPEEDRALSLREGATLQ
                     SFPRNYVFKAGSRDKIARLIGNAVPPMYAEKIGRAIVDNIEC"
     gene            complement(2602..3210)
                     /locus_tag="ACFJCW_002009"
     CDS             complement(2602..3210)
                     /locus_tag="ACFJCW_002009"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF012372.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4152064.1"
                     /translation="MQVLAGIDYELSCKETYEANINAKFIQADIFELQPETLEKELGL
                     KKNDDDLILIGCSPCQYWSVIQTDKRKSEKSKSLLLEFQRFVEYFNPGYVVVENVPGI
                     LSRMKESGLDNFIKLLEEKGFTVHFGIHNTADYGIPQSRKRFTLIANRITKKSWNQSS
                     IRANGLRYAMFWEWKTAFPKLWQDIKTRRILCIVVRDYPISI"
     gene            3579..3725
                     /locus_tag="ACFJCW_002010"
     CDS             3579..3725
                     /locus_tag="ACFJCW_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152065.1"
                     /translation="MSRIYLPLLFPPHIVERGLLYFQQDKVRDVQKISLGHYRAKVFD
                     SENY"
     gene            complement(4102..4551)
                     /locus_tag="ACFJCW_002011"
     CDS             complement(4102..4551)
                     /locus_tag="ACFJCW_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HFC4152066.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         1324 a         1043 c          736 g         1534 t
ORIGIN      
        1 tatctcccat gtgcgaatcc tcaaaaacgg gcaaaaaaaa agccctgtta cttgtagaaa
       61 gtaaagggcg ttaatttttg ttaatcgccc cttcttaggg acgcaatata taagggtctt
      121 aattaaagga agatgccgtc tgattttttc agacggcatc ttttatttcc tcgaccaacc
      181 gatttaatcg ctccctacaa atagctttat tttttaattc gcactcccaa acgacaatca
      241 ctttgaaacc aatcttttcc agctcggttt catttttaat atcacgttcg cgattttttg
      301 tgattttttc caaccaaaaa tccatattgc ttttcgggat atgtccttta ttacaagaat
      361 gcccgtgcca aaaacagccg tgtataaaca cgactgtttt atatttaggc aaaacgatat
      421 ccggtttgcc tgcatagcgc ttatcgtttt tccgataacg gaaaccttgg gaaaaaagaa
      481 atttccttac caatacttcc ggtttggttt ctttgctatg gatttttgac atcacgaagg
      541 aacgtttgga tggagtgaaa atatcggtca taaaatttaa ggcgatgtag gtttagctcg
      601 tttttttgtt tgttccactt ttctcaataa atatgaaact aagctgatta aatccaaagc
      661 atccttgtca ttaaaaatac taggagataa atttgctctt aactcatgtt gcacaggatt
      721 tctaaatcca gtccatgttc cgcatgcaag ctgttcaaga ccatcttcta aattttgttc
      781 cgcctgcgtt ttgttattcg ttaatagaag catagatttt ttactcccga aggctttttc
      841 aatcaattct cttccgtcta tgctatgaag acctgtctgc ttctgaacct tatcttcgaa
      901 aactttaact gcctcgattg cagcacttaa ataatccttc ttttcattgt aaaaatcgtt
      961 acaggcagta tgcaaatcct gatgcaaatg ccgccaatga tagtaaggat attctggaat
     1021 aatactatgt aaggcagaga ttacttccgc ttgttcttta tttgtaagct ccgaatcttc
     1081 caaacgattc aaaataactt ctaccggttc tctttccttt tctggcaatt tgtttttcca
     1141 attttcgata tcaactccgc tttcaccttt cacttcgtaa tctttctctt tttttcttct
     1201 ttttctccaa tcttgcccga tggctcagac gatttcccca aggaaaaccc gtaattttga
     1261 agttttagga tgcttccaat ccaatgatgt cctatctgta gcgattaaat cttcaccatc
     1321 attatctata aaatcaatac ttaaccatcc tgtcagatag gattagaaat ggctggattc
     1381 gctatcagtg aaaaactcgg gcatatttac cattctgccg ttggcaaaca aggtaatacc
     1441 tttcatatta ttctttaaag gtttttccgt tgtaatgaac ttaccttgta ttaatccgct
     1501 gtattcatac tgttcgaatt ttgaagataa cgatgaaata ttggttgcta gatcctggta
     1561 ttcccattcg aattgtgggg taacaagatt atattttagg tttccgtcaa tgattcttgg
     1621 ttccgagccg ttcaagctta ctttgatttt aaaatcctga gccggaaaat caaataaacg
     1681 ggaaagatgc cccacataat tatctaacgg gtatccttgt tttttcgtca gctcggttaa
     1741 agttatagtt gttccgtttt cggtattggg tttaacagac tctttctgaa actccggttg
     1801 ataaatacgc tcactttttt taatctctgc ataatccaaa gtaaaagtaa cccgttcgtt
     1861 tccttggata gtagagattt cgattttgtt gccaagcctg aataatgcca atttaccaag
     1921 acctttttta cccgttggaa ttcttccgca cggggaggct tgtttttctt cccttctgtt
     1981 ccgaccgatt ctcaaataaa aatcattgat ttcatcgaag ctcattccta tgccattatc
     2041 tttaataacg attttatgct ccggtttatc gaataaccta acttccactt ccgtagcaca
     2101 tgcatcgtag gcattcgcta tcaactcggc aatcgcagga acagtgtgcg aatacatctt
     2161 tacacccaaa tgttcgatta cggttggctc gaaactcatt ttcaattttt cttcagacat
     2221 gttttctcct tttctaacat tcgatattat caacaattgc cctgcctatt ttttccgcat
     2281 acatcggagg aacggcatta ccaatcaaac gggctatctt gtccctactg cccgctttaa
     2341 agacatagtt acgagggaac gattgcaatg ttgcaccttc tcgcagggat aacgccctat
     2401 cttcttcagg atgggcaaac cgcccgttgg aaatgctaaa gaatttggtc gttatggtag
     2461 gtgcgggctt atcccaccat agcctaccga acgtgtcttt aaaactattg tcttttccga
     2521 taaaacattc cagctgtaat tcgggaatat gcgcaaaagc caaacggttt cctccgtttt
     2581 taggtatcaa agccaatcgt ttcaaattga tatcggataa tcccgcacaa ctatgcataa
     2641 aatccgtctc gtcttgatgt cctgccataa ttttgggaaa gccgttttcc attcccaaaa
     2701 catcgcgtac cgtaagccgt ttgcccgaat acttgactgg ttccagcttt ttttggttat
     2761 tctgtttgca attaacgtaa atcttttacg gctttgggga attccgtaat cagccgtatt
     2821 gtgaataccg aaatggacgg taaatccttt ttcttccaat aactttatga aattatcaag
     2881 cccgctttct ttcattctgc tcagaattcc cggtacgttc tctacaacaa catatccggg
     2941 attgaaatat tctacaaacc gctgaaactc caaaagcaaa ctcttggatt tttccgattt
     3001 tcttttgtct gtttgaataa cactccaata ttgacaagga ctacaaccta taagaatcaa
     3061 atcatcatca ttctttttta agccgagttc tttttccaag gtttcaggct gcaattcaaa
     3121 aatatcagcc tgtataaatt tggcatttat attggcttca tatgtttctt tgcagctaag
     3181 ttcgtaatct atcccggcta aaacctgaat accggcggat tacattccat agctcattcc
     3241 gcctccgcca cagaaaaaat caaccgcctt taacttactg tttttcattt ctatttaaat
     3301 aattagacta gtgagaacta actttatata acatataatt tattgcttat caaaaataat
     3361 ttgagatttt attaaaattc atgcatctaa ataagcagaa cttaatttcc tccaaacgat
     3421 cggatatctt caaatgcaca tttcacagaa aggtcgtctg aaacccattt tcagacgacc
     3481 tttttccact tcgcaaaaca agaattccca cccctctccc caaacatcgc ccaaaccagt
     3541 aaattcccca tatttcaaca actccttgga agcaaaccat gtcccgtatc tacctacccc
     3601 tcctatttcc gccccacatc gtcgaacgcg gccttttgta ttttcagcag gacaaggttc
     3661 gcgatgtcca aaaaatttcc ttagggcatt atcgggcgaa ggtattcgat tcggaaaact
     3721 attaggcatg gttgaagctg gatagtgatt tgtacattaa ggacggggct gcgattgccc
     3781 ttatgtctaa aggtgcaaac atgccttaaa ttactaagcc tataacgaat tggaaacaaa
     3841 atgccgtctg aaaacatctt cagacggcat tataaaatct gttcaccttt tcagatgagt
     3901 aatgtacacc cctatacaat ttttgctacc atgcaccata aatccacggc taaagataat
     3961 tgggtttatt cttttatcca gaaacaatcc agatacggat cacgggtcat aactataggc
     4021 ttaatattac acgattctca ttccatcaag gcggaaaacc gcacaaatac tgaaacacta
     4081 tcgatcgatt tgtaaacaag cctacttaag taacttgcag tccttatcat ttcctttaaa
     4141 ataatccagc ccgtcactac acgaactggc ggacttcttg caaataaagg ttactagatt
     4201 ttcattcatc ttaataataa aaggattttt atctttatct atggctaccg ccttcaacat
     4261 gaatttactg tctaaagccc cgcgcgcgat tccattcaaa cggatacaaa agccttctgc
     4321 ctctttaatc ggcaaacttg gccatttggt agatgtttgt ttaaatctcc cattctgcag
     4381 ataaaacttt tccataaaat gtgcattttc taacaaggct gcccgcactg catttatctt
     4441 tgctttctca acataattgc gatagctcgg ataaacaatt aaagcaagta cagacaatat
     4501 caagaccact gatattaatt caaccagcgt aaacccccga ttatcagtca ttactttact
     4561 tccaataaga acagattatt caacatattt ctttgaacag acttactatc ccattcagca
     4621 gtatgcatat ttcccac
//
LOCUS       DAXGCP010000123         4568 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.124, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000123 DAXGCP010000000
VERSION     DAXGCP010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4568
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.124"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            59..1496
                     /locus_tag="ACFJCW_002012"
                     /pseudo
     CDS             59..1496
                     /locus_tag="ACFJCW_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
     gene            1499..2597
                     /locus_tag="ACFJCW_002013"
                     /pseudo
     CDS             1499..2597
                     /locus_tag="ACFJCW_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2609..3144
                     /locus_tag="ACFJCW_002014"
                     /pseudo
     CDS             2609..3144
                     /locus_tag="ACFJCW_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
     gene            3146..3788
                     /locus_tag="ACFJCW_002015"
                     /pseudo
     CDS             3146..3788
                     /locus_tag="ACFJCW_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
     gene            3809..4168
                     /locus_tag="ACFJCW_002016"
     CDS             3809..4168
                     /locus_tag="ACFJCW_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HFC4152067.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            4260..4335
                     /locus_tag="ACFJCW_002017"
     tRNA            4260..4335
                     /locus_tag="ACFJCW_002017"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4293..4295,aa:Asn,seq:gtt)
BASE COUNT         1229 a          957 c         1199 g         1183 t
ORIGIN      
        1 gacaattggc cgttgcgggc ggtcagctat ccgctcgtta cggtatcggg ggtttccttt
       61 ggaaaactca ttaattatcg gtctggcact ggcggtattg ctgatgcttt tggttatgcg
      121 tgcgaagcag ggtaagaaaa caccgaagcg caaatcccaa ggtgtcggca atacgcaggg
      181 gcagccgccc ggaagcaatg attcggactg ggtcgatcag acttggtcaa tcggtttcag
      241 acggcacgca actcgactgg tcttggaacg aaagtgccga gaccgcatcc gccgccgtat
      301 ccgcgcaaga agtcgatccg cttacggagt atcaggttta taagcaattc ggttatcagg
      361 gcaaggctgc cgaatctttg gctgcctatc tggacggcat tccggatggt gaagcgaaac
      421 ctgagaacct tatccgcgag ctgatcgata tcaatctcga agtgggggat gtcgatgttt
      481 tggcagacaa tctgcaaaaa tacggcagac tgattccttt cgaacttttg gcaaaatata
      541 tcgaacaggc attacagcga gattcaaacc atttgcgtat ccgcgtcttg gcggaagaag
      601 gtttgggata gggcactcag gagattgaaa aacgtgcgga aggcggttct gcgacggcag
      661 cttccgcatc gcccccgccg gatgtcggcg gtaaggctta tggagccgaa gaaatcaagc
      721 gcatcccgat tgtgcggggc aaaaaagacg tgtccggaat cagccaagag aaaatcggtg
      781 cgattgccgg cctggtccgc gccgatcaag gtgcgaaaat ccttaaagac aaagtcagct
      841 acgaaacggc atcgaaacaa tacgaccgtg ccatccaaac ttccgaaaaa cctgcaaacc
      901 tgattatcga tgcgttgaaa ctcgattacc aacacgcgga catagaccgt tttgccggac
      961 atttgtggaa actttaccaa acgttgggca actacggcag gcaggttaaa gagcggatgc
     1021 tgggttaggg gtacagcctg ggttaccatg aagttttcga tgatttggaa aaggggccga
     1081 acgatcggca aatcaaagac atcggtatga ggcacgggta tctgccgaaa aatatacaga
     1141 aattcaaagc gcaacatcgg gatttggtgc ttcaagattc ttcgttgatc aacactggtt
     1201 cgtctccggc agacgatgcg gttaaagaag tagagtcgtt gctgatgtat ggtcagattg
     1261 aagcggcaat ggatgtgttg gagcaggcgg tattgaaata tcccgacgaa tcccagcttt
     1321 atattacgtt gatcgatatt tatgaacgta ctgaagattg ggataggttg gggcagtttt
     1381 taagggtatt gagggaacgt gcggacaggc ttcctgaaga ggtcgttatg ctgatgagcc
     1441 ggctgctgca gcgtatgaat caaaatatta aaaaaataaa acggtacgga aaataaaaat
     1501 ggaagttcaa ctgccgaaaa ttaaaacagt acgcgtaatg ttggcgggga tgacggcgca
     1561 gcaggaatcc gttttcaaaa tggcattcaa aatgcacaat accacccgtt atgaaacagt
     1621 atccccttca gacggcagtg ccgtgcccga tttggttttg gcggataccg atgccgaggg
     1681 cggttttgaa ctttggaaag agcttgccgg gcgttataag gctatacccg tcgccgtctg
     1741 ttcggagaaa gttcccgatt ctgaagttcc ctacctgccc aaaccgattc ggtttgaaac
     1801 attgtttcct atgctccgca agttattgca gggcgagaat gtttatggga aatcgtttat
     1861 tgcacccgca gaccggtcgg cgaaaaacaa cgggaatgtg cagcgtacgg ttacgatacg
     1921 ccagtttaac ccgaataaag gattattggg ggcgttgcgg tttgcggaaa agaacaggca
     1981 ggacatcgct atcttgcatg gaaataagcc ggtccttaat tgttttcccc tcgatacaac
     2041 gggttttgct gacagaaagt gtgtaaaaac tcgaagaatt gtgcaaagac gaaaatttgc
     2101 aggtcagttg caagactgtt cccgataact cgcaatggcg cgaaaaggct aaagtaggca
     2161 ttatgtcctg tatgtggcag ttttccattt ggacggcgca ggacaggttg atttatccga
     2221 tttttcccga tactccgttt acgttgaaat cttggccaaa cctgacccgg taggcaaatg
     2281 tgccggggtc gatacgcttg tcggcatttt tgaccaaggc atccgtcaac cttaacgtgt
     2341 tgtataaagt gatgccttta aacctcaatg atattctgaa ttatcttgcg gcaacctata
     2401 caaccgggtt tttgtcggta gatttgaaaa cggtttcaca acaggcatac tccgatatgg
     2461 cggataaaat aaatatcggg gccgattctg cttctgatag tgaaatgatg aaaaaagcgg
     2521 aaaaaatcac gacaccatcc caatcccagt cgcgcggcct tctgcaaaga ctgatgaaaa
     2581 aactgttggg cagctaagag gcggagagat gagagaaaat aaaattattt tcacaggacc
     2641 tgtcggcgta gggaaaacca ctgccattgc ggctatttcg gacgaagcac tcgtccagac
     2701 cgatgcttcc gcatccgaca tgactttgga taggaaaagg aatacgacag tggcgatgga
     2761 ctacgggcca tcagcttgga tgaggatacc aaagtccatt tatatagtac gcccggtcag
     2821 gaacggttca actttatgtg ggaaatctta agccaaggca gtatgggttt ggtattgctt
     2881 ttagataatg cccgaaccaa cccgttgaaa gatttggaat tctttttaca ttcgtttcga
     2941 gggctgctgg agaaggcatc cgtcgttgtc ggtattacca agatggatat acgctctcag
     3001 cccggtatcg acgtgtatca caaatatctt gcaaaacata atcttaatgt tccggttttt
     3061 gaaattgatg cccgtaagga agatgacgta aaacaattgg ttagcgcaat gttattttct
     3121 attgatccgg gactggaggt ttaatatgga atcaacactt tcactacaag cgaatttata
     3181 tccctgcctg actcctgccg gtgcatttta tgccgtatcc agcgatgccc ccagtgccgg
     3241 taaaactttg ttgcgcagcc tgttgaaagc ggatgcggac gaagtggtca gcagtgagaa
     3301 gctgctcgcg ggcggacacc gccgacatcg ataccgcttt gaacctgttg taccgtttgc
     3361 aaaaactcga attcctctat ggcgatgaaa acggtcattc agacggcatc aatttgtcgg
     3421 acgagcaatt gccgttgctg atggaacaat tgtccggcag cggtaaggca ttattggtcg
     3481 atcggaacgg tctgtatctt gccaacgcca atttccatca tgagtcggcg gaagagttgg
     3541 ggttgttggc ggcagaagtc gcacagatgg aaaagaaata ccggctgctg attaggaaca
     3601 acctgtatat caacaataac gcttggggcg tttgcgatcc ttccggtcag agcgaattga
     3661 catttttccc attgtatatc ggttcaacca aatttatttt ggttatcgcc ggcattcccg
     3721 atttgagcaa agaggcattt gttactttgg taaggatttt ataccgccgt tacagcaacc
     3781 gcgtgtaaaa cttgggacag gagggattat gcagcaatta ttgatttcaa tccttgaaga
     3841 tttaaataat acatctacgg atattatcgc gtctgccgtt atctcaaccg acggattgcc
     3901 gatggcgaca atgcttcctt cacatttgaa ttcggacagg gtaggggcga tttctgccac
     3961 tttgcttgct ttggggagtc gctcggtgca ggaactcgcc tgcggggaat tggaacaagt
     4021 gatgattaaa ggaaaatcag gctatatcct tttaagtcag gcgggtaaag atgccgtgtt
     4081 ggtgctggtg gcaaaagaaa ccggcagact tggtttaatc ctattggatg ccaaacgtgc
     4141 ggcaaggcat attgcggaag ccatataaca tataaagatt gcgggcttgc agataagtgc
     4201 aatcgattgt caatttatat tgacacgttc ggtatttctg ttttattatt cgcgtttact
     4261 ccccgatagc tcagtcggta gagcgacgga ctgttaatcc gcaggtccct ggttcgagcc
     4321 caggtcgggg agccaaattc caaaaccctc taagtatttt cttagagggt tttgttttac
     4381 cggcggtcag aaacgcattt ttgagatgat tgttttgaga tggaataaaa tctttgcaaa
     4441 attcctttcg tgatggttat gaaaaataaa tttctaaaga tttaattggt tatttttata
     4501 attttgaaat ttatcggttt tgtaaaggtc tcgggataag caatttcggt cttcggcgcg
     4561 tcttttac
//
LOCUS       DAXGCP010000124         4528 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.125, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000124 DAXGCP010000000
VERSION     DAXGCP010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4528
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.125"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            86..2749
                     /gene="aceE"
                     /locus_tag="ACFJCW_002018"
     CDS             86..2749
                     /gene="aceE"
                     /locus_tag="ACFJCW_002018"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HFC4152068.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLLKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSDFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAIETERFNRLHPLEAEKVPFVTSQLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            2899..4461
                     /gene="aceF"
                     /locus_tag="ACFJCW_002019"
     CDS             2899..4461
                     /gene="aceF"
                     /locus_tag="ACFJCW_002019"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HFC4152069.1"
                     /translation="MSIVEIKVPDIGGHESVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGAAAAEAAPAAAAEAQPAPAAAGG
                     ATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGVVKAV
                     FLEVGDKVSEGSAIIEVETAGSAAAAPAPAAQAAAPAAVPTSASPAAAKIDEAAFAKA
                     HAGPSARKLARELGVDLDQVKGSGLKGRIMGDDIKAFVKSVMQGGAAKPAAAGASLGG
                     GLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTVHEEADMTELEEF
                     RKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLVLKNYFNIGFAADT
                     PNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACFTISSLGGIGGTG
                     FTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVIDGAAGMRFTVFL
                     ANLLKDFRRITL"
BASE COUNT         1161 a         1296 c         1159 g          912 t
ORIGIN      
        1 tgcttattat ttttcacaaa cgaaaataaa ggggttggct acaccctccc ttccgattaa
       61 acactcaaca taaaggatag atactatgtc cacccaatta cacgatgttg accctatcga
      121 aacccaagag tggctggacg cgttaagctc cgtcctcgaa tatgaaggcg gcgaacgcgc
      181 gcaatacctc ttggaaaacc tgctcaaata ctgccgcgac aaaggcgtac gtatgcccca
      241 cggcacgacc accccgtatt tgaataccgt ttcggttgaa aacgaaaaag gcattccggg
      301 cgaccaaaac atcgaacacc gcattcgcgc attcgtacgc tggaacgccg ccgccatcgt
      361 attgcgcgcc ggcaagaaag atttggaact gggtgggcac atcgcatctt tccaatctgc
      421 cgccaccatg tacgaagtcg gtttcaacca cttctggaaa gccaaaggtg aaggtgaaga
      481 aggcgatttg gtcttcttcc aaggtcacgt tgccccgggc atctatgcac gcgcattcgt
      541 cgaaggccgt ctgaccgaag accagctgaa caacttccgc caagaagtgg acggacacgg
      601 tctgccttcc tatccacacc cccacctctt gcccgacttc tggcagttcc cgaccgtatc
      661 catgggcttg ggccccatca tggcgattta tcaggcgcgt ttcctgaaat acttggaatc
      721 acgcggcttg gcaaaaacca aaggccgtaa agtatggtgt ttctgcggcg acggcgaaat
      781 ggacgaaccc gaatcccaag gtgcaatcgc gctggctgca cgcgaaggct tggacaacct
      841 gattttcgtc atcaactgca acctgcaacg cttggacggt ccggtgcgcg gcaacggcaa
      901 aatcatccaa gaattggaag gcaactttgc cggtgccggc tggaatgtcg tcaaagtcat
      961 ttggggccgc cgttgggacc gcctcttggc gaaagacaaa gacggtatcc tgcgccaacg
     1021 tatggaagaa tgtttggacg gcgactacca aacttacaaa tccaaagacg gcgcgtatgt
     1081 gcgcgaacac ttcttcaata cgcccgaact gaaagcattg gttgccgata tgaccgatga
     1141 gcaactctgg gcattgaacc gcggcggcca cgatcctcaa aaagtgtaca acgcctacga
     1201 ccgcgcagcg aaccatgccg acggcaaacc taccgttatc ttggcgaaaa ccattaaagg
     1261 ttacggtatg ggcgcatccg gcgaaggtca gaacgttgcc caccaagcca aaaaaatgga
     1321 caaagcgtcc ctgaaacaat tccgcgaccg ctttgacatt ccggttaccg acgaacaaat
     1381 cgaaagcggc gatctgcctt acctgacttt tgcccccgat acggaagaat acaaatacct
     1441 gcacgcacgc cgcgatgctt tgggcggcta cctgccgcaa cgcaaaccga cgcaggaagt
     1501 attggaagtg cccgagctgt cggcattcga cgcacaactc aaatccagcg gtgaacgcga
     1561 gttctcgacc acgatggcat tcgtccgcat cctgtccact ttgctgaaag acaaaaaaat
     1621 cggcaaacgc gtcgtaccta tcgttcccga cgaaagccgt actttcggca tggaaggtat
     1681 gttccgccaa tacggtattt ggaatccgaa aggtcagcaa tatacccctc aagacaaaga
     1741 ccaactgatg ttctataaag aatccgttga cggtcaaatc ttgcaagaag gtattaacga
     1801 accgggcgcg atggccgact ggattgcggc tgcgaccagc tacgccaaca gcgacttcgc
     1861 gatgattccg ttctacattt actactccat gttcggtttc caacgtatcg gcgacttggc
     1921 ttgggcggcg ggcgatatgc acgcgcgcgg cttcctgctg ggcggtactg ccggccgtac
     1981 gacgctgaac ggcgaaggtc tgcaacacga agacggccac agccacatcc aggccgacct
     2041 gattccgaac tgcgtatctt atgacccgac cttccaatac gaagtggccg tcatcgtaca
     2101 agacggtctg cgccgtatgt atgccaataa tgaagacgtg ttctactaca tcaccctgat
     2161 gaacgagaac tacacccatc ccgatatgcc ggaaggtgcg gaacaagaca tcctcaaagg
     2221 tatgtacctg ctgaaagccg gcggcaaagg cgacaagaaa gtccaattga tgggttccgg
     2281 tacgattctg caagaagtga ttgccggtgc cgagctgctg aaagccgact tcggcgtgga
     2341 agcggacatc tggtcttgcc cgtccttcaa cctgctgcac cgcgacgcca tcgaaaccga
     2401 acgcttcaac cgcctgcatc cgctggaagc tgaaaaagtg cctttcgtta cttcccaact
     2461 gcaaggtcat gacggtccgg ttatcgccgc taccgactat atccgcagct atgccgaccg
     2521 tatccgcgcg tacatcccga acgactacca tgtcttgggc actgacggtt tcggccgttc
     2581 cgacagccgc gccaacctgc gccgcttctt tgaagtggac cgctacaacg ttgccgtggc
     2641 agcattggcc gcattggcgg aacaaggcaa agtcagcaaa gaaaccgttc aacaagccat
     2701 tgagaaatac ggcatcaaag ccgattcagc ccctagctgg aaacgctgat tgatgtttca
     2761 gacggcctgt ttgtttcatg ccaacatcag gccgtctgaa aaccgaatgc ccgaatggtt
     2821 tgaacagaca aaccgtaccg atgccgcctg aagcagcttt cagacggcat ccaactgaaa
     2881 aagattaaag gaactcaaat gagtatcgta gaaatcaaag tccccgatat cggcggtcac
     2941 gaaagcgtcg acatcatcgc cgtagaagtt aaagcgggcg acaccatcgc cgttgacgac
     3001 accctgatta cactggaaac cgacaaagcc acgatggatg tgcctgccga tgcggccggt
     3061 gtcgtgaaag aagtaaaagt caaagtcggc gacaaaatct ccgaaggcgg cgtaattttg
     3121 accgttgaaa ccggtgccgc cgctgccgaa gccgccccgg ctgctgccgc cgaagcacaa
     3181 cctgcacccg ctgccgcagg cggtgcaacc gttcaagtag ccgttcccga tatcggcggc
     3241 cataccgatg tagatgtaat cgccgttgaa atcaaagttg gcgacaccgt tgccgaagac
     3301 gacacgctga ttactttgga aaccgataaa gcgacaatgg acgtaccttg taccgctgcc
     3361 ggtgtcgtta aagccgtatt cttagaagtc ggcgacaaag tgtccgaagg ctctgccatt
     3421 atcgaagtgg aaaccgccgg ctctgccgca gcagctcctg cgcctgccgc tcaagctgcc
     3481 gcacccgccg ccgtgcctac atctgcctcg cctgccgctg ccaaaatcga tgaagccgct
     3541 ttcgccaaag cacacgccgg tccttccgca cgcaaactgg cgcgcgaatt gggcgtggat
     3601 ttggaccaag tcaaaggtag cggcttgaaa ggccgtatca tgggagacga catcaaagcc
     3661 tttgtgaaat ccgtaatgca gggcggcgcg gcaaaacctg ccgcagccgg cgcatctttg
     3721 ggcggcggtc tggacttgct gccgtggcct aaagtggact tctccaaatt cggcaatgtc
     3781 gaagttaaag aattgtcccg cattaagaaa atctccggtc aaaacctgtc ccgcaactgg
     3841 gtggtgattc ctcacgttac cgtacacgaa gaagcggata tgaccgaact ggaagaattc
     3901 cgcaaacagc tgaacaaaga atgggaacgc gaaggcgtga aactgtcccc gttggcgttc
     3961 atcatcaaag cctccgtttc cgcgctgaaa gccttccccg aattcaacgc ttctttggac
     4021 ggcgacaacc tggtgctgaa aaactacttc aacatcggtt tcgcagccga tacgccgaac
     4081 ggcttggttg ttcccgtcat caaagacgtg gatcaaaaag gcttgaaaca aatcagccaa
     4141 gaattgaccg aattgtccaa aaaagcccgc gaaggcaagc tcaaaccgca agaaatgcaa
     4201 ggcgcgtgct ttaccatttc cagcttgggc ggcatcggcg gcacaggttt cacgccgatt
     4261 gtgaacgctc ccgaagtcgc tatcttgggc gtgtgcaaat cccaaatcaa accggtttgg
     4321 aacggcaaag agtttgcccc gcgcctgatg tgcccgttga gcctgtcctt cgaccaccgc
     4381 gtcatcgacg gtgccgccgg tatgcgcttc accgtattcc tggcgaacct gttgaaagac
     4441 ttccgccgca ttaccttata aaataaaaca tccctctcaa gcagtctgat aatgtttgga
     4501 ttgcttgaga ttgatgagtg atggtgtt
//
LOCUS       DAXGCP010000125         4488 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.126, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000125 DAXGCP010000000
VERSION     DAXGCP010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4488
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.126"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(18..1280)
                     /locus_tag="ACFJCW_002020"
     CDS             complement(18..1280)
                     /locus_tag="ACFJCW_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152070.1"
                     /translation="MKQKKTVQCILLGFAAASMHAQGAAAANSGTIEKTDKYTLVLAK
                     QGQENNYTLNGGTEVKPLNSLIIAANGGTNNITIKGKLADGPADAPPTIDNNSIERNI
                     NKNGYTYAWQNWSGAVMLVDQSYEGENKVTFENVTIAAHNAPAGILSDDRHKSSSLAP
                     AMLAFKGRNTINMDADSNANSSNEGILLLNNGEKMGEYRLVSEEGSTLNINIKSGKDK
                     GQGITANHYGNSDINFNKASPNITTMEFKGGVNIKIDRNGQEEAESNGFGFYSSRKLG
                     NKKQIPEGSKMEAIFRGNADIVATPVYDEQGRPKSIGSAFAIDGKYSKVEVVGGEGKV
                     VKIKGDIFAYNGGSVSVNLANKDSYFEGEAHIGKRSFAKGKDMFALTVDADGYELTPD
                     TKSIEKKKLNVRGCTRLSLNSTPIPQDF"
     gene            1478..1553
                     /locus_tag="ACFJCW_002021"
     tRNA            1478..1553
                     /locus_tag="ACFJCW_002021"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1512..1514,aa:Glu,seq:ttc)
     gene            complement(1769..1921)
                     /locus_tag="ACFJCW_002022"
     CDS             complement(1769..1921)
                     /locus_tag="ACFJCW_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152071.1"
                     /translation="MPSENRSAGFVVHYYVVLQDKAQGKAAGCIVATDNEKRGRCRLN
                     RVLRRV"
     gene            1981..2787
                     /gene="thiD"
                     /locus_tag="ACFJCW_002023"
     CDS             1981..2787
                     /gene="thiD"
                     /locus_tag="ACFJCW_002023"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HFC4152072.1"
                     /translation="MKGSFVQTLAIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIKEDFDIRAYKIGMLGTAEIIECVADKLKHCSFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDILTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVIIKGGHLNGSTSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGLDVCKAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
     gene            complement(2845..3714)
                     /gene="tehB"
                     /locus_tag="ACFJCW_002024"
     CDS             complement(2845..3714)
                     /gene="tehB"
                     /locus_tag="ACFJCW_002024"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HFC4152073.1"
                     /translation="MKERIVGQSGELFCFGQMPVWKVENLPEVLLSGYSSEEGEWVCL
                     NVLQGDVEVRAPDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSLYCAAADYFH
                     KKYGMSATHSAVAAAQDTVPAGRALDMGCGQGRNALFLGLKGFDVTAADCNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKKPG"
     gene            3827..4264
                     /gene="rnhA"
                     /locus_tag="ACFJCW_002025"
     CDS             3827..4264
                     /gene="rnhA"
                     /locus_tag="ACFJCW_002025"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HFC4152074.1"
                     /translation="MDTPVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWQELDALVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
BASE COUNT         1043 a         1260 c         1063 g         1122 t
ORIGIN      
        1 gcacaccgcc ccggcagcta aaaatcctgc gggatcggtg tggaatttag ggataatcta
       61 gtacagcccc taacattcag ctttttcttt tcaatcgact ttgtatcggg ggttaattca
      121 tatccgtccg catccacggt taaggcaaac atatctttcc ctttggcaaa gctccttttc
      181 ccgatatggg cttccccttc aaaataagag tctttgttgg caaggttcac gctcacgctg
      241 ccgccgttgt aggcgaaaat atcgcctttg attttgacaa ccttgccttc cccgccgaca
      301 acctcgactt tgctgtattt cccgtcaatc gcaaacgcgc tgcctatgct tttgggcctg
      361 ccttgctcgt cataaaccgg cgttgcaacg atatcggcgt tcccacggaa aatcgcttcc
      421 atcttagaac cttccggaat ctgcttctta ttgcctaatt tgcggcttga atagaagcca
      481 aaaccgttgc tttccgcctc ttcctgtccg ttcctatcga ttttaatgtt tacaccgccc
      541 ttgaactcca ttgtggtgat gtttggagaa gccttgttga agttgatgtc tgagttacca
      601 tagtggttgg cggtaatgcc ctgtccttta tcttttcctg atttgatgtt gatattcagc
      661 gtcgagcctt cttcggaaac aagacgatat tctcccattt tttcaccatt attaagcaat
      721 aggatacctt cgttactaga gttggcattt gagtccgcgt ccatattgat ggtattgcgc
      781 cctttaaagg caagcatcgc cggcgccaag ctactggatt tatgcctatc atcagacaaa
      841 atgccggcag gcgcgttatg ggcggctatg gttacgtttt caaaagtaac cttattttct
      901 ccctcatagc tttgatccac caacatcacc gcgccgctcc aattctgcca tgcgtacgtg
      961 taaccgtttt tatttatatt tctttcaatc gagttattgt caatcgtcgg cggggcatcg
     1021 gcaggaccgt ctgccaattt gccttttatc gtaatgttgt tcgtaccgcc gttggcggca
     1081 atgatgaggg aatttaaggg tttgacttcg gttccgccat taagggtata gttgttctct
     1141 tgcccttgtt ttgcgaggac gagggtgtat ttgtctgtct tctctatcgt tccactgttt
     1201 gcagcggccg ccccttgcgc gtgcatagaa gcggccgcga agccaagtaa gatgcactga
     1261 actgtcttct tttgtttcat cggtttttcc attttgaagg tatgtgattt ttatcattat
     1321 atgcttaaat cattgacacg cccccaaaaa aaaatgaatt gcttgatatt ccaatgtttt
     1381 ttatcttgtg atacggtcag acaaacgccc cctgacattc gtttagacgg catcgtattg
     1441 ctaaatttct ataagtatgt ataatgtccg tttccacgcg cccatcgtct agaggcctag
     1501 gacactgccc tttcacggcg gcaaccgggg ttcgaatccc cgtgggcgtg ccaattcaaa
     1561 aacctgcttg tttcaagcag gttttttatt atgaatcgtt attcccgcaa tttttcgtca
     1621 ttgccgtgaa aacgggaatc tagaacctca aactttcaga taatctttga atattgctgt
     1681 tgttctaagg tccggattcc cgcctgcgcg ggaatgacgg aattttaggt ttctgttttt
     1741 gcgggaatga cgaatgaagc gtgccggttt atactcgccg caacacgcgg ttcagacggc
     1801 atcgccctct tttttcatta tcagttgcta cgatgcaccc cgctgccttg ccctgtgcct
     1861 tgtcctgcaa tacgacataa taatgcacca caaaccccgc gctgcggttt tcagacggca
     1921 ttgcctgctt ttttacaggc agtagccctt tttatcggac gcaatattaa ggaggaacaa
     1981 atgaaaggct cttttgtgca gacgcttgcc atcgccggtt cggattcggg cggcggtgcg
     2041 ggcattcagg cggatttgaa aacgtttcag atgcgcggcg tgttcggaac gtgtgtcatc
     2101 accgccgtta ccgcgcaaaa taccttgggc gtgtcggcgg ttcatctcgt cccgaccgaa
     2161 accatcaccg cacaaatcca agcaatcaag gaagactttg acatccgcgc ctacaaaatc
     2221 ggtatgctcg gcacggcgga aatcatcgaa tgcgttgccg acaagctgaa acactgcagc
     2281 tttggcaggc gcgtactcga ccctgtgatg attgccaaag gcggtgcgcc gctgttgcag
     2341 gattccgccg ttgcggcact gacgcgcctg ctgctgccgg acacggacat cctgaccccc
     2401 aacctgcccg aggcggaagc cttgacgggc gtgcatatcg aaaaccgtaa agatgcggaa
     2461 cgtgcggcaa aaatcctgct tgattacggt gtcaaaaatg tcattatcaa aggcggacat
     2521 ttgaacggca gcacaagcgg acgctgcacg gattggctgt ttacgcaaaa cgaaacgctg
     2581 gaattggaca gcccgcgctt tccgaccgcc cacacgcacg gcacgggctg cacgttttcc
     2641 gcctgcatta ccgccgagtt ggcaaaaggc ttagacgttt gcaaagccgt acagactgcc
     2701 aaggcctaca tcacggcggc aatctcaaac cctttggaaa tcggcgcggg acacgggccg
     2761 gtcaatcatt gggcgtatcg ggactagacg taaaaatgcc gtctgaacgc cttttcgggt
     2821 tcagacggca tcgtccggcg cggcttatcc tggttttttc gccagcatag ttacaaattt
     2881 aaaccgtatc gggttgccgt tttcgtcttt ggcgtgcatc gcgcccaatt cttctttata
     2941 ttcgaccagc tcccaatccc gataataatc cttcagctcg ccctctttaa atttgaaggg
     3001 gaacggcatc gggcagggga aatccgccgt atccattgcc gatacgatta agttgtaccc
     3061 gcccgccgcc gtatgcgcct gcatatcggc aatcacgtcg ggcacgcgct gcggcatcag
     3121 gaacatcagc accaccgttg ccacaatata atcaaactcg ccctgaaggg cggcggcgtt
     3181 caaatcatat tccagcgtgc ggacgttcaa accctccgcc tctgccagtt ccgccacgtt
     3241 tgccaacgcg gcgggattgc aatcggcagc ggttacatca aaccccttca aacccaggaa
     3301 cagcgcgttg cgcccctgtc cgcagcccat atccaacgcc ctgcccgccg gtacggtatc
     3361 ctgtgccgcc gcgaccgcag aatgcgtggc actcatcccg tattttttgt gaaaatagtc
     3421 tgccgccgcg caatacagcg acaaacggat ttcggcatcg tccgttttcg gtttgaccga
     3481 aaacacctgc tgcggcgcaa acacgcaatc gccgctttcc gccgaccaaa cctctgccgc
     3541 cccgtccggt gcacggactt cgacatcgcc ctgcaacaca ttcaggcaga cccattcccc
     3601 ttcctcggac gaataacccg acaacaaaac ttccggcagg ttttccactt tccatacagg
     3661 catttgtccg aaacaaaaca actcgccact ttgacccact atccgctcct tcatattcaa
     3721 aaataaagtt gcacattata tgcctatttc aatccgccgc aatctttcag acggcacgac
     3781 gcacaaaccg cttataatca cgccggacac cacacaaagg cacgatatgg acacacccgt
     3841 ttacctctac acggacggcg cgtgcaaagg caatcccggc gcgggcggct ggggcgtatt
     3901 aatgcgctac ggcagccgcg aaaaagaact tttcggcggc gaagcgcaaa ccaccaacaa
     3961 ccgcatggag ctgaccgccg ttatcgaagg gctgaaatcg ctcaaacgcc gctgcaccgt
     4021 catcatctgc accgactcgc aatacgtcaa aaacggcatg gaaaactgga tacacggttg
     4081 gaagcgcaac ggctggaaaa ccgccgccaa acagcccgtc aaaaacgacg acttgtggca
     4141 agaactcgac gctctggtcg ggcagcatca agtcagctgg acttgggtta aaggacacgc
     4201 gggacacgcg gaaaacgaac gcgccgacga tttggcaaac cgtggcgcgg cgcagttttc
     4261 ttgattgccg caccgacaaa aatgccgtct gaaaccgcta atgggcttca gacggcatcg
     4321 tcctccaccg tcattcccgc gcaggcggga atccagaacg tcgggcaacg gcaatattca
     4381 aaagccgtct gaaaatttaa aagttctaga ttcccgtttt cacgggaatg acgaaaagtt
     4441 gcggacagca gaggaatgac gagatactac tttaattgac aacagcat
//
LOCUS       DAXGCP010000126         4459 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.127, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000126 DAXGCP010000000
VERSION     DAXGCP010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4459
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.127"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..226
                     /locus_tag="ACFJCW_002026"
                     /pseudo
     CDS             1..226
                     /locus_tag="ACFJCW_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
     gene            complement(224..416)
                     /locus_tag="ACFJCW_002027"
                     /pseudo
     CDS             complement(224..416)
                     /locus_tag="ACFJCW_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor"
     gene            810..2147
                     /gene="ribBA"
                     /locus_tag="ACFJCW_002028"
     CDS             810..2147
                     /gene="ribBA"
                     /locus_tag="ACFJCW_002028"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HFC4152075.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQNRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTGRPPGHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAVNFMIKHARGLVCLPMEGAMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPADIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPAAVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGDAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALDRVQQAESGVVILLHHTEDGASLLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLHVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            complement(2310..2426)
                     /locus_tag="ACFJCW_002029"
     CDS             complement(2310..2426)
                     /locus_tag="ACFJCW_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HFC4152076.1"
                     /translation="MPSESLSDGILFGLENTYAVLSPKERIQKTKATGIHRK"
     gene            complement(2458..4059)
                     /locus_tag="ACFJCW_002030"
     CDS             complement(2458..4059)
                     /locus_tag="ACFJCW_002030"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent DNA methyltransferase"
                     /protein_id="HFC4152077.1"
                     /translation="MTEQHFTEQIKSLIDSLKTICANYGLGNDGNEFKIISQAFLYKF
                     LNDKYDFEVKQIRKEKPDEPIEFVNMDIEGKTAVLKPEHSIKYLSERQNGADFAKLFD
                     DTLTDIAAHNADLFSVKTEGGAKIVLFERISQYITDEGRRDDFCRALISKLAGFSFEA
                     IFAQKFDFFATIFEYLIKDYNSNSGGKYAEYYTPHAVARIMADILVPEEVRGQIRSVD
                     VYDPSAGSGTLLMNVAHAIGEDKCMIYTQDISQKSSNLLRLNLILNNLVHSLNNVVQG
                     NTILSPAHKDASGRLKKFDFIVSNPPFKLDFSDFRDQLESDENRERFFAGIPKIKAKD
                     KDKMEIYQLFIQHILFSLKENGKAAIVLPTGFITAQSDIDKKIREYLVENKMLAGVVS
                     MPSNIFATTGTNVSILFIDKTNKDKVVLIDASGLGEKIKDGKNQKTVLSCEEEQKICN
                     TFTNKQAVEDFSVVVGYDEIKAKNHSLSAGQYFEVKIDYVDISADEFVQKIAGFSADL
                     DKLFAESAELEKEIKDRLAMLKFNS"
     gene            complement(4126..>4459)
                     /locus_tag="ACFJCW_002031"
     CDS             complement(4126..>4459)
                     /locus_tag="ACFJCW_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152078.1"
                     /translation="ATNTEVQQFLESDFIDLKEDFLSEKVSIPNRKRIALVQDRLNNM
                     TLDQRQELLNYLAEYNNNILKFNADGSRVEISTDVQLKHLLYGIDERYYTTALGKEKR
                     LANSVQPI"
BASE COUNT         1151 a         1179 c          954 g         1175 t
ORIGIN      
        1 tgcaagaaca gcggcagagt tggtaggcgt taataaaaat accgcagcct atgattttca
       61 tcgtttacga tgactgattt atcaaaacgg tccgcattta gaaatgtttg atggcgaagt
      121 agaagcagat gaaagttatt ttggcggaca acgcaaaggt aaacgcggtc gcggtgctgc
      181 cggaaaagtc gcagtattca ggcttctcaa acgaaatggc aaggtttcct ttgccgtccg
      241 ttatgtacgt ttcgtaacat tcgaagaatt cctgaaccct gcccgccgtt tcggtttctg
      301 taccccctgt tagataaggg gggaagattc gaagcggttg ccggcttcct gccgtccgcc
      361 ggcgcgtccg tcatcacgcc ggcaaccgcc tttgtcatcc cttgcttatc ttccatgtgc
      421 aaatcctcaa aaacgggcaa aaaaaagccc tgttacttgt agaaagtaaa gggcgatccg
      481 tccggttttt atcgggaagg cggcattcat cataggattg ccggtattgc gcctgctcgt
      541 accgcctatg ccgtacccgg caatcaaggc tttttatcag aatttttttc ggaataaccc
      601 tccggaaacc ccataatcag aagcgtgcgg gaagaaacag ccgccccgcc ggcggggttg
      661 cggcaatgcc gtctgaagcc acgaatccgg cttcaaacgg catttgttta ccaaaaggca
      721 aataatcctg tttgacgaaa aacagatttg ctttttggta aatacgcgct tacaatccgc
      781 tacatccgat ttctacaaag gataaaacga tgaccgacac agccggcttg cgccgccgca
      841 acctgcggca atggatagcg gaacactacg gcggactgca aaaccgtttt gccgaagccg
      901 ttgccctcaa cacaggcgaa ctctccgccc ttttgaaaaa caaatccttc ggcgagaaaa
      961 aagcccgcaa aatcgaacag gcggcaaaaa tgcccgcctt ctggctcgat accgaacaca
     1021 ccggccgacc gcccggacac acaggaaaac acaccatgtc ccatatttcc cccatccccg
     1081 aaatcctagc cgacatcaaa gccggtaaaa tggtcatcat caccgatgcc gaagaccgcg
     1141 aaaacgaagg cgacctgctg atggcggcgc aattcgttac ccccgaagcc gtcaacttta
     1201 tgatcaaaca cgcgcgcggc ttagtctgcc tgcctatgga aggtgcaatg gtcgaaaaac
     1261 tcggtctgcc gatgatgacc caaaaaaacg gcgcgcaata cggtaccaac tttaccgttt
     1321 ccatcgaagc cgcgcacggc attaccaccg gcatttccgc cgccgaccgc gccctgacta
     1381 ttcaaaccgc cgtttccccg accgccaaac ccgcagacat cgtccaaccc ggtcatatct
     1441 tcccgcttcg cgcccaaaaa ggcggcgtac tcgtccgtgc cggacacacc gaagccggcg
     1501 tcgacttggc gcaaatgaac gggctgattc ccgccgccgt catctgcgaa atcatcaacg
     1561 acgacggcac gatggcgcgt atgcccgaac tgatgaaatt cgccgaagaa cacaagctca
     1621 aaatcggcac gattgccgac ctcatcgaat accgcagccg caccgaaagc ctgctcgaag
     1681 atatgggcga cgcgcccgta caaactccgt ggggcgagtt ccaacaacac gtttacgtcg
     1741 acaaactctc cggcgaaacc cacctcgccc tcgtcaaagg cacaccctcc gccgacaccg
     1801 aaaccctcgt ccgcgtccac gaacccttca gcgtgatgga cttcatccaa gccaatccgc
     1861 gccattcctg gtcgctgccc aaagcccttg atcgcgtcca acaggccgaa agcggcgtcg
     1921 tcatcctcct gcaccacacc gaagacggcg catccctgct cgaccgcacc ctacccaaag
     1981 gcgcaaacca agcctacaaa tgggacagca aaagctacgg catcggcgcg caaatcctcg
     2041 ccggcctcca cgtcaaaaaa ctgcgcgtcc tcggccaacc gtcatctttc accggcctca
     2101 ccggcttcgg cctcgaagtc gtcggctttg aagaagcgga aaaataatat agtaaattca
     2161 aatgctttat atttgcttca tttattgcat tatttccgta caaacgaaaa cccggtctgt
     2221 tgggttggat tttgcttttt tcggatttcg ggtaacttct aattcgtcat tcccgcgcag
     2281 gcgggaatcc ggttcgtcgg gtttttgtgt catttccgat gaattcctgt ggctttggtt
     2341 ttttggattc tctctttcgg ggaaagaacg gcataagtat tttccaaacc aaacaaaatg
     2401 ccgtctgaaa ggctttcaga cggcatttta agtttgaccg gtttcattca tcagtattta
     2461 tgaattgaat ttcaacatcg ccaatctatc cttaatctcc ttttccaatt cggcagattc
     2521 ggcgaaaagt ttatccaaat ccgctgaaaa tcccgctatt ttttgcacaa attcgtcggc
     2581 ggatatatcc acataatcaa tttttacctc aaaatactgc cccgccgaca agctgtgatt
     2641 cttcgctttg atttcatcgt agccgaccac cacgctgaaa tcttccactg cctgtttgtt
     2701 cgtgaaagta ttgcagattt tttgttcttc ttcgcaggaa agtacggttt tttggttttt
     2761 gccgtctttg attttttcgc ccaagcccga tgcgtcaatt aataccactt tgtctttatt
     2821 ggttttgtcg ataaacagga tggaaacatt ggttcccgtc gtggcgaaaa tattggaagg
     2881 catggacacc acgccggcaa gcattttgtt ttccaccaaa tattcgcgga tttttttgtc
     2941 gatgtccgat tgagccgtga taaagcccgt cggcaataca atcgccgctt ttccgttttc
     3001 tttcaggcta aacaagatat gctggataaa aagctggtag atttccattt tatccttatc
     3061 cttcgcctta attttcggaa tgcctgcaaa aaagcgttcg cggttttcat cgctttccaa
     3121 ctgatcgcga aaatcgctga aatccaattt aaacggcgga ttggaaacaa tgaaatcaaa
     3181 ttttttcaga cggcctgaag cgtctttgtg ggcgggcgac aaaatcgtat tgccctgaac
     3241 cacattattc aaagaatgca ccaaattatt caaaatcaga ttcagccgca aaagattgga
     3301 cgatttttgc gaaatatcct gcgtataaat catacatttg tcttcgccga tggcatgggc
     3361 gacgttcatc aacagcgttc cagaaccggc cgacgggtcg taaacgtcca cgctgcggat
     3421 ttgcccgcgc acctcctccg gcaccaaaat atccgccata atccgcgcta ctgcgtgcgg
     3481 cgtgtagtat tcggcgtatt ttccgccgga attgctgttg tagtctttaa tcaggtattc
     3541 aaaaatcgtg gcgaaaaaat caaatttttg cgcaaaaatc gcctcaaaac taaaacccgc
     3601 caacttagaa atcagcgcgc ggcaaaaatc gtcgcggcga ccttcgtcag taatgtactg
     3661 actaatacgc tcaaacaaca cgattttcgc cccgccttca gtttttaccg aaaacaaatc
     3721 cgcattatgt gcggcaatat cggtcagcgt atcatcaaag agtttggcaa agtccgcgcc
     3781 gttttgtcgc tccgacaaat acttgatgga atgttcaggc ttcaaaaccg ctgtttttcc
     3841 ctcaatatcc atattgacga actcgatcgg ctcgtcgggc ttttctttgc ggatttgttt
     3901 cacttcgaaa tcgtatttgt catttaggaa tttatacaaa aacgcctgac tgatgatttt
     3961 aaattcgttg ccatcgttac ctaagccata gttggcgcaa atggttttta agctgtcgat
     4021 tagggatttg atttgttcgg taaagtgttg ttcggtcatg gaatgtctcg gtttgttgct
     4081 agcgtcgctt aaattttgtt tagcattagt tggtttgctg gcagattaaa taggttgaac
     4141 actatttgcc aaccttttct cttttcctaa tgctgttgtg taataacgtt catcaatacc
     4201 atataacaaa tgtttcagct gtacatcagt agaaatttct acacgagagc catctgcgtt
     4261 aaatttcaag atattattat tatattcagc aaggtaattt aatagttctt gtctttgatc
     4321 tagcgtcata ttattcaatc tatcttgaac taaagctatt cttttcctat tgggaataga
     4381 tactttttca cttaaaaaat cttcttttaa atcaataaaa tcgctttcta agaattgctg
     4441 tacttcagta tttgtagct
//
LOCUS       DAXGCP010000127         4445 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.128, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000127 DAXGCP010000000
VERSION     DAXGCP010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4445
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.128"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(62..781)
                     /gene="pyrH"
                     /locus_tag="ACFJCW_002032"
     CDS             complement(62..781)
                     /gene="pyrH"
                     /locus_tag="ACFJCW_002032"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HFC4152079.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEIVK
                     MGVQVGIVVGGGNIFRGVSTQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDPSATRYETITFDEALNKNLKVMDATAFALCRERKLNIVVFGI
                     AKQGSLKRVITGEDEGTLVHC"
     gene            complement(998..1852)
                     /gene="tsf"
                     /locus_tag="ACFJCW_002033"
     CDS             complement(998..1852)
                     /gene="tsf"
                     /locus_tag="ACFJCW_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HFC4152080.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVESERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENDTEVVSFIRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(1981..2709)
                     /gene="rpsB"
                     /locus_tag="ACFJCW_002034"
     CDS             complement(1981..2709)
                     /gene="rpsB"
                     /locus_tag="ACFJCW_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HFC4152081.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQEAQEAVRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDHRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQETAAE"
     gene            complement(2882..3115)
                     /locus_tag="ACFJCW_002035"
     CDS             complement(2882..3115)
                     /locus_tag="ACFJCW_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152082.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWVVLPTVFTVFA
                     VTVRRRNRLMRQQEQAESEQQRAQRQKDSGTKP"
     gene            3193..3774
                     /locus_tag="ACFJCW_002036"
     CDS             3193..3774
                     /locus_tag="ACFJCW_002036"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HFC4152083.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAAAVKINRLLKRYIKKGR
                     KIGVYWPMGNELRLDGFVRAAQKRGAKLYLPYIEPHTRRMWFTPYPERGMERERKRGR
                     AKLHVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLSAMKYRLQAKTV
                     GVGFACQLVDRLPREAHDLPLDGFVSEAGILCF"
     gene            3835..4425
                     /locus_tag="ACFJCW_002037"
     CDS             3835..4425
                     /locus_tag="ACFJCW_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HFC4152084.1"
                     /translation="MSERIILPVLSLGGVRFEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEADRVVGTTAYYHFEPQIPHLDIGFTWYAASA
                     RRKRINTCCKIMLLDYAFDVLACCCAGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT          949 a         1038 c         1288 g         1170 t
ORIGIN      
        1 ataaatggct gtctgaagcc catatgcgac tatatctgcc gaccctatgg tcaatcatca
       61 atcagcagtg gaccagtgtg ccttcgtctt cgccggtaat gacgcgtttg agcgagcctt
      121 gtttggcgat gccgaagacg acgatattga gcttgcgttc gcggcagagg gcaaaggcgg
      181 tcgcgtccat gactttgagg tttttattca aggcttcgtc aaaagtaatg gtttcgtagc
      241 gtgtggcgga cgggtctttt ttcgggtctg cggtgtacac gccgtcgacg ttggtggctt
      301 tgagcatcac gtcgcagttc atttccgcgc cgcgcaatgc ggcggcagtg tcggtcgtga
      361 agaacggatt accggtaccg gcggcgaaaa tcacgacttt gccttcttcc aaatattgaa
      421 tggctttagg acgggcgtaa gtttcagcga tttgctgcat agacagtgcg gattgtacgc
      481 gcgctttgat gcccaaggtt tcaaatgcgt ctttgagtgc caaggcgttc atcacggtcg
      541 ccatcatgcc catgtagtcg gcagtggcgc ggtccatgct gcctgcttgt gtagatacgc
      601 cgcggaaaat gttaccgccg ccgacaacga taccgacttg cacacccatt ttcacgattt
      661 cggcaatttc gccgacagtt tgaacaatgg tatcgtgatt gatgccgaac ggatcggaac
      721 ccatcaggga ttcgccggag agtttcagta atacgcgttt gtatttgatt tgctgtgtca
      781 tgggatacct tgctttcttg aatgtcgtcg gtcggagttg ggacgtctga atttcaaatg
      841 gtcggattac aatgatatgg tgtgtcgttc tattattgtt ttgttttcag acggccttta
      901 tattcggtcg tcttaaaata ggtaccgtaa acggttttct caaaaaaaag caccctgatt
      961 cgtttggaat ccaggtgctt tctttttcat aagtgcctta cactttggcg gctgcggcta
     1021 cttcggctgc gtagtcgaca acggctttct cgataccgtc gcctactttg tagcggatga
     1081 agctaaccac ttcagtgtcg ttttctttag cgaattgggc aacagtttgg tcagggttca
     1141 tcacgaatgc ttggccgttc agagtgattt cagccaagaa tttgcggata cggccttcaa
     1201 ccattttagc ggcgatgtcg gcaggtttgc cggaagcgat ggcttgctcg gtgtagatgt
     1261 ggcgttcttt ttcaacggtt tcagcatcta cttcggcttc gcttacgcat tgcggtttgg
     1321 cggcaacgat gtgcataccg attttgcgtg ctacatcttc agagcctttg tactcgacca
     1381 aaacgccttc ggtcgccaat gcgccgtgga tgtaggcaac cagttggttg gcagtgtcaa
     1441 tcacttggaa gcggcggaca gacatgttct cgcccaattt agcgatgatg gctttgcgtt
     1501 ctgattcaac cagttcgctc agttcttcaa cagaagccgg ttttttctcg gcagcagttt
     1561 tcgcaacgaa gttggcaaat tctacgaagc cggcgtcttt agcaacgaag tcggtttcgc
     1621 agtttacttc gaccaatgcg ccgacattac cgttgattgc ataagccaat acgccttcgg
     1681 cagcagtacg gccagccagt ttgcccgctt tcgcaccgga tttaatacgc aggatttctt
     1741 cggctttgtc gaagttgcct tcagcttcaa ccaaggcttt tttgcattcc atcataccca
     1801 ggccggtagc ggcgcgcagg tcggcaacca tttttgcagt aatttctgcc attttgaatc
     1861 tcctagattt ttgggaaata cggaaaggat tttccacatt cgggaatcgt gtgccgcgaa
     1921 cgggcgttca gacggcatat ttgagaaaag gggcataacg cccctcttct gtgtaccgaa
     1981 ttactcggca gcggtttctt gggcagcggc tacggtttct tgcagcgctt ggtttttgcc
     2041 ttccaaaact gcgtcggcga tgcctcggca gtacaggcgg atggctttgg cggagtcgtc
     2101 gttgccgggg atgacgtatt tcacgccgtc tgggctgttg ttggtatcga ctacggcgat
     2161 aacggggatg cccagttttt cagcttcaac cagagtacct ttttggtagc cggtatcgat
     2221 aacgaaaatc gcgtcgggca ggcctttcat gtttttgata ccgcccaaag agcgttccag
     2281 tttttcaacg tcgcgttgca tttccagaat ttcttttttg ctgaaaccgc tttcggcagc
     2341 attttccaag gctgcggttt tttcttccag gcgtttgatg gattgcttaa cggttttgta
     2401 gttggtcagc ataccgccca accagcggtg gtcgacgaaa ggcataccgg cgcgggtcgc
     2461 ttcttcgcgg atgatgtcgc gtgcctggcg tttggtacct acgaacaata ccgtaccttt
     2521 gttggcaacc agacgacgta cggcttcttg cgcctcttgg aacatcggca gggttttttc
     2581 caagtttacg atatggattt tgttgcgcgc gccgaaaatg tattgagcca ttttcgggtt
     2641 ccagaaacgg gtttggtgac cgaagtgaac accggcttca atcatctgac gcatagtaat
     2701 ttgagacatg ttatttcctt gaaagggtta aagagcacac attcaatcgc atagaacttg
     2761 ataggcggcg cctattgtca agcacccttc ggcgaaagtg ggcataagtt ttaaaaatag
     2821 tgtgtttccg aaatggaaaa ctgacggatt atagcggata agatgccgtc tgaaaaggga
     2881 ttcagggttt tgtgccgctg tctttttgcc gttgtgcgcg ctgctgttcg gattctgcct
     2941 gttcctgctg cctcatcagg cggttgcggc ggcggacggt tacggcgaag accgtgaaca
     3001 cggtgggcag aaccacccaa aaaaccaaat aaatcaaagc gcgcgcaata ctcggctgcg
     3061 cggcggaata cataacggca acaaaaagat agccgatggc gacgatgtgc cacattgtgt
     3121 gcgtcctgtt tgaatgttaa caaaatcgtt ataatcgcaa cattctaccg caatcctgaa
     3181 aggccgtctg aaatgaggaa cgaggaaaaa cgcgccctgc gccgcgaatt gcgcgggcgg
     3241 cgttcgcaaa tggggcggga cgtgcgggcg gcggcggcgg taaaaatcaa ccgcctgctc
     3301 aaacgttata tcaaaaaggg gcggaagatc ggcgtgtatt ggccgatggg caacgagctg
     3361 cgtttggacg gctttgtccg cgcggcgcaa aaacgcggcg caaaactcta tctgccttat
     3421 atcgaaccgc acacgcggcg gatgtggttt acgccgtatc ctgaacgcgg aatggaacgg
     3481 gaacgcaagc gcggtagggc gaagctgcat gtccctcagt ttgcagggcg caaaatccgc
     3541 gtgcacggtt tgtcggtatt gctcgtcccg cttgtcggca tagaccgcga aggctaccgt
     3601 ttggggcagg caggcggcta ttacgatgcg acgctttcgg cgatgaaata ccgtttgcag
     3661 gcgaaaaccg tgggcgtggg ctttgcctgc cagttggtgg acaggctccc acgcgaggcg
     3721 cacgacctgc cgctggacgg ttttgtatcg gaagcgggga tattgtgttt ttagccgttc
     3781 agacggcatt tcgggcggaa atgccgtctg aaggcggaat attgggagaa aaggatgtcg
     3841 gaaaggataa tactgccggt tttgtcattg ggcggcgtac ggttcgaacc gttggatgtg
     3901 catcatgaaa cgggtttgcg cgaggcggtt tgcgatgggg aggtttggaa gctgggggta
     3961 acgtccgcgc cccatccgga tagggtggca gactatatcg ggacagcatt ggcaacgcgt
     4021 ttggcgtttg cggttgtcga tgaagaggcg gacagggtgg tcgggacaac ggcgtattat
     4081 cattttgaac cgcagattcc gcatttggat atcggattca catggtatgc ggcatcggca
     4141 cggcggaaac ggataaacac ctgttgcaaa atcatgctgt tggattacgc atttgatgtt
     4201 ttagcttgct gttgcgcggg atggcgcacg gatattctga accttgcctc gcaacgtgcc
     4261 atcgaacggc tgggcgcgga aaaagacggc gtgctgcgta tgcatatgct ccgtaaagac
     4321 ggcagtgtgc gcgatacggt tgtgtacagt atgctgaggg aagattggtg caaaaacagg
     4381 gaaatcctga ccggcaggtt ggcagggtat ggcgtgcagg tgtgaggcag tattctcaaa
     4441 tttaa
//
LOCUS       DAXGCP010000128         4305 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.129, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000128 DAXGCP010000000
VERSION     DAXGCP010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4305)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4305)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4305
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.129"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1347
                     /locus_tag="ACFJCW_002038"
     CDS             <1..1347
                     /locus_tag="ACFJCW_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HFC4152085.1"
                     /translation="DKKKEHKGLGLTTEITVDFGKKTLIGKLIKNNMLINNKGEYTTQ
                     YYSLDAQVTGNRFSGKAMATEKGENKQHPFVSDSSSLSGGFFGPQGEELGFRFLSDDG
                     KVAVVGSAKTKDETASSGGTSGGASVSTSNGAAGTSSENKLTTVLDAVELTPNGKKIK
                     DLDNFSNAAQLVVDGIMIPLLPKDSESGGSHTDKGENGKTAFIYETTYTPESDKEDAQ
                     TGMATNGVQTVSNTAGGTSGKTKTHYEVQACCSNLNYLKYGLLTRKNSSQADAKMGQV
                     EQSMFLQGERTDEKEIPQEQNVVYSGTWYGHIATNGTSWTREASDQENGNRANFDVNF
                     KDKRITGTLTAENRSEATFTIEAMIEGNGFKGTAKTGNGGFAPDQNSSTGTHKVHITK
                     AAVQGGFYGPNAEELGGWFAYPGNGQTKNAQTSSGNGNSAGSATVVFGAKRQQLVK"
     gene            1434..4181
                     /gene="tbpA"
                     /locus_tag="ACFJCW_002039"
     CDS             1434..4181
                     /gene="tbpA"
                     /locus_tag="ACFJCW_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent transferrin-binding protein TbpA"
                     /protein_id="HFC4152086.1"
                     /translation="MQQQHLFRFNILCLSLMTALPAYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVALTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIRTGRHAGEIRAHEAAGRGVQSFNRLAPVDDASTWAYFIVEEECKNRDYETCKAKP
                     KKDVDGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILERT
                     QQTFDTRDMTVPAFLTKAVFDENKKYGSIRGYGKYAGDHRYGGLITNSENGAQVGAEY
                     GTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADGS
                     DKYCRPSADKPSSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGYDRFGSD
                     LRHQDYYYQHANRAYSLKTPPQNGDKKTIPPNGGKDKPYWVSIGGGNVVTGQICFFGN
                     NTYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTL
                     SWNTGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRSGDKIKAVKIDPEKSFNKEAGI
                     VFKGDFGNLEASWFNNAYRDLIVRGYEVEITDGKEQAKGDPAYLNAQSARITGINILG
                     KIDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGSGYD
                     QPEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTV
                     KKHFTLRAGVYNLLNHRYVTWENVRQTAAGAVNQHKNVGVYNRYAAPGRNYTFSLEMK
                     F"
BASE COUNT         1211 a         1146 c         1122 g          826 t
ORIGIN      
        1 gataaaaaaa aagagcacaa aggtttggga ttaacaacgg aaataacggt tgattttggg
       61 aaaaaaaccc tgatcggaaa attaattaaa aacaacatgt taatcaataa taagggtgaa
      121 tacaccaccc aatattacag ccttgatgct caagtaacag gcaaccgctt cagcggcaag
      181 gcgatggcaa ccgaaaaagg cgaaaacaaa caacatccct ttgtttccga ctcgtcttct
      241 ctgagcggcg gctttttcgg cccgcagggt gaggaattgg gtttccgctt tttgagcgac
      301 gatggaaaag ttgccgttgt cggcagcgcg aaaaccaaag acgaaaccgc aagcagtggc
      361 ggcacttcgg gcggtgcaag cgtttccaca tcaaacggtg cggcaggcac gtcgtctgaa
      421 aacaagctga ccacggtttt ggatgcggtt gaattgacac caaacggcaa gaaaatcaaa
      481 gatctcgaca acttcagcaa cgccgcccaa ctggttgtcg acggcattat gattccgctc
      541 ctgcccaagg attccgaaag cgggggcagt catacagata aaggtgaaaa cggcaaaaca
      601 gcctttatct acgaaacaac ctacacgccg gaaagtgata aagaagacgc tcaaacaggt
      661 atggcgacca atggcgtgca aaccgtttca aatacggcag gcggcacaag tggcaaaaca
      721 aaaacccatt atgaagtcca agcctgctgt tccaacctca attatctgaa atacgggttg
      781 ctgacgcgta aaaacagtag tcaagctgac gctaaaatgg gacaagttga acaaagtatg
      841 ttcctccaag gcgagcgcac cgatgaaaaa gaaattccac aagaacaaaa tgtcgtttat
      901 tcaggcactt ggtacgggca tattgccacc aacggcacaa gttggacccg cgaagcctcc
      961 gatcaggaaa atggtaatcg ggcaaatttt gacgtgaatt tcaaagacaa aagaattacc
     1021 ggcacgttaa ccgctgaaaa caggtcggag gcaaccttta ccattgaagc catgattgag
     1081 ggcaacggct ttaaaggtac ggcgaaaacc ggtaatggcg gctttgcgcc ggatcaaaac
     1141 agcagcaccg gtacacataa agtgcacatc acaaaagccg cggtgcaggg cggtttttat
     1201 gggcctaacg ccgaagagtt gggcggttgg tttgcctatc cgggcaatgg acaaacgaaa
     1261 aatgcgcaaa cttcatccgg caatggaaat tcagcaggca gcgcgaccgt ggtattcggt
     1321 gcgaaacgcc aacagcttgt gaaataagca cggctgccga acaatcgaga ataaggcttc
     1381 agacggcatc gttccttccg attccgtctg aaagcgaagg gtagggaaac actatgcaac
     1441 agcaacattt gttccgattc aatattttat gcctgtcttt aatgactgcg ctgcccgctt
     1501 atgcagaaaa tgtgcaagcc ggacaagcac aggaaaaaca gttggatacc atacaggtaa
     1561 aagccaaaaa acagaaaacc cgccgcgata acgaagtaac cggtttgggc aaattggtta
     1621 aaaccgccga caccctcagc aaggaacagg tactcgatat ccgcgacctg acccgctacg
     1681 accccggtat cgccgtcgtc gaacaggggc gcggcgcaag ctctggctac tcgatacgcg
     1741 gtatggacaa aaaccgcgtc gccttgacgg tggacggctt ggcgcaaata cagtcctaca
     1801 ccgcgcaggc ggcattgggc gggacgagga cggcgggcag cagcggcgca atcaatgaaa
     1861 tcgagtatga aaacgttaag gctgtcgaaa tcagcaaagg ctcaaactcg gtcgaacaag
     1921 gcagcggcgc attggcgggc tcggtcgcat ttcaaaccaa aaccgccgac gatgttatcg
     1981 gggaaggcag gcagtggggc attcagagta aaaccgccta ttccggcaaa aaccgggggc
     2041 ttacccaatc catcgcgctg gcggggcgca tcggcggtgc ggaggctttg ctgatccgca
     2101 ccgggcggca cgcgggggaa atccgcgccc acgaagccgc cggacgcggc gttcagagct
     2161 tcaacaggct ggcgccggtt gatgacgcga gcacatgggc ctatttcatc gttgaagaag
     2221 aatgcaaaaa cagggattac gaaacgtgta aagcgaagcc gaaaaaagat gttgacggca
     2281 aagacgaacg tcaaacggtt tccacccgag actacacggg ccccaaccgc ttcctcgccg
     2341 atccgctttc atacgaaagc cggtcgtggc tgttccgccc gggttttcgt tttgagaata
     2401 agcggcacta catcggcggc atactcgaac gcacgcagca aactttcgac acgcgcgata
     2461 tgacggttcc ggcattcctg accaaggcgg tttttgatga aaataaaaaa tacggatcga
     2521 taagaggcta cggcaaatac gcgggcgacc accgatacgg cgggctgatt accaacagtg
     2581 aaaacggtgc gcaggtgggc gcggaatacg gtacgggcgt gttttacgac gagacgcaca
     2641 ccaaaagccg ctacggtttg gaatatgtct ataccaatgc cgataaagac acttgggcgg
     2701 attatgcccg cctctcttac gaccggcagg gtatcggttt ggacaatcat tttcagcaga
     2761 cgcactgttc cgccgacggt tcggacaaat attgccgtcc gagtgccgac aagccgtctt
     2821 cctattacaa atccgaccgc gtgatttacg gggaaagcca caggctcttg caggcggcat
     2881 tcaaaaaatc cttcgatacc gccaaaatcc gccacaacct gagcgtcaac ctcggttacg
     2941 accgttttgg ttccgacctc cgccatcagg attattatta tcaacatgcc aaccgcgcct
     3001 attcgctgaa aacgccccct caaaacggcg ataaaaaaac catccccccc aacggcggca
     3061 aggacaagcc ctattgggtc agcataggcg ggggaaatgt ggttacgggg caaatctgct
     3121 tctttggcaa caatacttat acggactgca cgccgcgcag catcaacggc aaaagctatt
     3181 acgcggcagt tcgggacaat gtccgtttgg gcaggtgggc ggatgtcggc gcgggcttgc
     3241 gctacgacta ccgcagcacg cattcggacg acggcagcgt ttccaccggc acgcaccgca
     3301 ccctgtcctg gaacaccggc atcgtcctca aacctgccga ctggctggat ttgacttacc
     3361 gcacctcaac cggcttccgc ctgccctcgt ttgcggaaat gtacggctgg cggtcgggcg
     3421 ataaaataaa agccgtcaaa atcgatccgg aaaaatcgtt caacaaagaa gccggcatcg
     3481 tgtttaaagg cgatttcggc aacttggagg caagttggtt caacaatgcc taccgcgatt
     3541 tgattgtccg gggttatgaa gtggaaatta cagacggcaa agaacaagcc aaaggcgacc
     3601 cggcttacct caatgcccaa agcgcgcgga ttaccggcat caatattttg ggcaaaatcg
     3661 attggaacgg cgtatgggat aaattgcccg aaggttggta ttccacattt gcctataatc
     3721 gtgtccgtgt ccgcgacatc aaaaaacgcg cagaccgcac cgatattcaa tcacacctgt
     3781 ttgatgccat ccaaccctcg cgctatgtcg tcggctcggg ctatgaccaa ccggaaggca
     3841 aatggggcgt gaacggtatg ctgacttatt ccaaagccaa ggaaatcaca gagttgttgg
     3901 gcagccgggc tttgctcaac ggcaacagcc gcaatacaaa agccaccgcg cgccgtaccc
     3961 gcccttggta tattgtggat gtgtccggtt attacacggt taaaaaacac ttcaccctcc
     4021 gtgcgggcgt gtacaacctc ctcaaccacc gctatgttac ttgggaaaat gtgcggcaaa
     4081 ctgccgccgg cgcagtcaac caacacaaaa atgtcggcgt ttacaaccga tatgccgccc
     4141 ccggccgcaa ctacacattt agcttggaaa tgaagttcta aatgccccct cgccgcaaat
     4201 gccgtctgaa aggcttcaga cggcattttt tacacaaatt tcaccgttcc ccatccctcc
     4261 cgacaatacc gtaatcccga aacccgtcat tcccgcgcag gcgtg
//
LOCUS       DAXGCP010000129         4153 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.130, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000129 DAXGCP010000000
VERSION     DAXGCP010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4153
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.130"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..228
                     /locus_tag="ACFJCW_002040"
     CDS             <1..228
                     /locus_tag="ACFJCW_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HFC4152087.1"
                     /translation="KKTVKFQFPPEVVRVLAGMGNNLNQIAKALNTAAKVGTLGNVEA
                     LKATTELAALERSLNSLRDFLAKEKNGWQSQ"
     gene            213..842
                     /locus_tag="ACFJCW_002041"
     CDS             213..842
                     /locus_tag="ACFJCW_002041"
                     /inference="COORDINATES: protein motif:HMM:NF015397.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HFC4152088.1"
                     /translation="MAVPMIVQFFNRGKGGGSGPIDYLLGKDRDREEARLLRGDPEET
                     AALINSSDYAKKYTAGCLSFEESNIPAEQKHALMDSFEECIFAGLDKDQYNCLWVEHR
                     DKGRLELNFVIPNIELLSGKRLQPYYYAADRGRVDAWRTMQNLTHGYSDPDDPAKRQS
                     MTQAKDLPRNTQEAAQSITEHHRRLRSPSPIRQAKKPRRRAGNAGKGRF"
     gene            926..1513
                     /locus_tag="ACFJCW_002042"
     CDS             926..1513
                     /locus_tag="ACFJCW_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbeB family mobilization protein"
                     /protein_id="HFC4152089.1"
                     /translation="MSKISDLAKTFEQTSRTEAASIEQQTKADLETLRKNINEALKQS
                     EQKITADINARQLRMSKAVFKPYLWSLLGISAAGLIVIAGLFIAIWSVKNELDDLKQQ
                     RAEAERTLDLLETKTKGLTLENCPVENSKATRVCVATEKRMMKALTHLGERLAELEQE
                     NTSLAQQLASLAAELERQSEIRQRQSEILNQLAKR"
     gene            1560..1814
                     /locus_tag="ACFJCW_002043"
     CDS             1560..1814
                     /locus_tag="ACFJCW_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cryptic plasmid protein A"
                     /protein_id="HFC4152090.1"
                     /translation="MITENERDRRTAAWLIETYGAEAVAEAETRIAGARKPYPSNIAK
                     VLGASLPEALKRTENAAARQKLAGLRRMLDGKAVKTSQDL"
     gene            complement(1792..2070)
                     /locus_tag="ACFJCW_002044"
     CDS             complement(1792..2070)
                     /locus_tag="ACFJCW_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease VapD"
                     /protein_id="HFC4152091.1"
                     /translation="MYAISFDLVVADTAQNHPKGISQAYADIGYTLRKFGFTRIQGSL
                     YTCQNEDMANLFSAINELKALPWFPSSVRDIRAFRIEQWSDFTSLVKS"
     gene            complement(2070..2255)
                     /locus_tag="ACFJCW_002045"
     CDS             complement(2070..2255)
                     /locus_tag="ACFJCW_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5397 family protein"
                     /protein_id="HFC4152092.1"
                     /translation="MQTTIPTGSIRTFGDYGVMYIVGTPAEQLPDGDWLVNIELPESG
                     EHTQYKLSHIVQDPKAA"
     gene            complement(2258..2503)
                     /locus_tag="ACFJCW_002046"
     CDS             complement(2258..2503)
                     /locus_tag="ACFJCW_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152093.1"
                     /translation="MTRYAINRDALYSAFKDFLYSEINANPALKSATVDDLADIVLAK
                     KWRIFLPDGIKRTTAEKAAQRVLYMTNQPENQTQQEN"
     gene            complement(2500..2742)
                     /locus_tag="ACFJCW_002047"
     CDS             complement(2500..2742)
                     /locus_tag="ACFJCW_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH domain-containing protein"
                     /protein_id="HFC4152094.1"
                     /translation="MAYPKLKTTKRDVTAKELAKRFGCSTRTVFRAWSQSRADYLAEN
                     SISRDKPWEHFGISRATWYRRGKPMPSETDNQSETA"
     gene            complement(2746..3615)
                     /locus_tag="ACFJCW_002048"
     CDS             complement(2746..3615)
                     /locus_tag="ACFJCW_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HFC4152095.1"
                     /translation="MSQLYTQPDLFLQERIPHKPYCKDFKEAPMLVRSYAAAIKRRYI
                     QVNPPHLRVFMLFDLDYEGAGLAWEDNNLPMPAWAAINRENGGAHLAYALSAPVLTAE
                     YGGRQKALRYLAALEAAYKAKLRGDVGFVSLITKNPEHPHWLTLRGVPDAIRGYDLEY
                     LADFVDLDKFKPYIGRSNVEAVGLSRNCTVFNLVSRWAHKNVLAFKQQGYTVQGWLKE
                     VHYQCMRVNGDFPVPMWEKEVKCISKSIANWVWYKFDIAASNRRFSELQAHRNSLRKT
                     TINAGRTKIITEL"
     gene            complement(3698..3922)
                     /locus_tag="ACFJCW_002049"
     CDS             complement(3698..3922)
                     /locus_tag="ACFJCW_002049"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152096.1"
                     /translation="MKNSGKNTHAALSELVSCFPQNAALLAGLGRAAALQALPLRLLA
                     SLNCGLENFEIRTPIGLLSDYGYFDIVVSS"
BASE COUNT         1126 a         1027 c         1114 g          886 t
ORIGIN      
        1 aaaaaaaccg tcaaattcca attcccgccc gaagtcgtgc gcgtccttgc aggcatgggt
       61 aacaacctga accaaatagc caaggccctg aacaccgccg caaaggtcgg cacgttgggc
      121 aatgtggaag cactcaaggc gacgaccgag ctggcagcgt tggaacgttc cttaaattcc
      181 ctacgggatt ttttagccaa agaaaagaac ggatggcagt cccaatgatt gtgcagtttt
      241 tcaatagggg gaaaggcggc gggagtggtc cgatagacta tcttctaggc aaagaccgcg
      301 accgagaaga agccagatta ttacgcggcg accccgaaga aaccgccgcc ctgataaaca
      361 gcagcgatta cgccaagaaa tacaccgccg gctgcctgag ctttgaagaa agcaacatcc
      421 ccgccgaaca gaaacacgcc ctgatggaca gcttcgaaga gtgtattttt gcaggcttgg
      481 acaaagacca atacaactgc ctatgggtag aacaccgaga caaagggcgt ttggaactca
      541 acttcgtgat accgaacatc gagcttttga gcggaaagcg gttacagccc tactactacg
      601 ccgccgacag aggaagagtg gacgcatggc gcaccatgca gaacctgacg cacggataca
      661 gcgacccaga cgaccccgcc aaacggcaga gcatgaccca agccaaagac ctgccgagaa
      721 acacgcagga agccgcacag agcatcacag agcatcacag acggcttaga agccctagcc
      781 ctatcaggca agctaaaaag ccgcgcagac gtgctggaaa cgctggaaaa ggtaggtttt
      841 gaaatatcac gagcgaccat cagcagcatc agcatcaaga acccggaccc aaaagggcgc
      901 aacatccgac tgaaaggcgc actgtatgag caagatttcc gatttggcga agaccttcga
      961 gcagacatca cgcaccgaag ccgccagcat agagcaacaa acgaaagcag acttagagac
     1021 gttacggaaa aatatcaacg aggcattgaa gcaaagcgag cagaaaataa ccgccgatat
     1081 aaacgcccgg cagttacgca tgagcaaggc agtattcaag ccctatctgt ggagcttgct
     1141 aggtatatcg gcggcagggt tgatagtcat agcagggctg ttcatagcga tatggagcgt
     1201 caagaacgag ctggacgact tgaaacagca gagagccgaa gcagagcgca ccctagacct
     1261 gttggaaacc aagaccaaag gtttgacact ggaaaattgc ccagtcgaga acagcaaagc
     1321 aacgcgggta tgcgtagcga ccgagaagcg aatgatgaaa gccttaacgc acttgggcga
     1381 aaggttggca gagctagagc aggaaaacac gagtttagcg cagcagctag cgagcttggc
     1441 agccgagtta gagcggcaga gcgaaatacg gcaacggcag agcgaaatct tgaatcaact
     1501 agccaaacga taagccaacg acacaaacga acccaaagca ggggatgggg aatgagccga
     1561 tgattaccga gaacgaacgc gacaggcgaa cagccgcatg gctgatagag acctacgggg
     1621 cagaagccgt agcggaagca gaaacccgca ttgcgggcgc gagaaagccc tatccgagca
     1681 atatcgccaa agtattgggg gctagcctac ccgaagccct aaaacgcaca gaaaacgccg
     1741 cagcgcgcca aaaactggca gggctgcggc ggatgttgga cggtaaggca gttaagactt
     1801 cacaagactt gtgaaatcag accactgctc aatgcggaac gcccgaatat cgcggacaga
     1861 agacggaaac caaggcagag cttttagctc gttgatggct gaaaacaggt tagccatatc
     1921 ttcgttttgg caggtgtaca aacttccctg aatgcgggta aagccgaatt tccgcagggt
     1981 gtatccaata tccgcgtagg cttgggaaat gcctttcgga tggttttgag cggtatcggc
     2041 aaccaccaaa tcaaaagaaa tcgcgtacat taggcagcct ttgggtcttg aacgatgtgg
     2101 gacagtttgt attgcgtgtg ttcgccgctt tccggcagtt caatatttac gagccaatcg
     2161 ccgtccggaa gctgttcggc aggcgtgccg acgatgtaca tcacgccgta atcgccaaag
     2221 gtgcggattg aaccggtggg gatagtggtt tgcatggtta gttctcctgt tgggtttggt
     2281 tttcaggctg gtttgtcatg tacaaaaccc gttgggcagc tttttcggct gttgtgcgtt
     2341 tgatgccgtc aggcagaaaa attctccatt ttttggctag aactatatct gcaagatcat
     2401 caaccgttgc gcttttcaaa gcaggatttg cgttaatttc cgaatacaga aaatctttga
     2461 atgccgagta cagagcatcg cggtttattg cgtatcttgt catgctgttt cgctttggtt
     2521 gtcagtttca gacggcatag gcttgccgcg cctgtaccaa gtggcgcggg aaatgccgaa
     2581 gtgttcccac ggtttatcgc ggctgataga gttttcggct aggtagtcgg cgcgggattg
     2641 cgaccatgcc cgaaaaacgg ttcttgtgga acagccgaag cgttttgcca gttctttagc
     2701 cgtaacgtct cgcttggtgg ttttcagttt tggataggcc atatttcaaa gctccgtgat
     2761 gatttttgtt ctgcctgcat tgatggttgt tttccgcaaa ctattccgat gagcctgcaa
     2821 ttccgaaaac cgtcgattgc tggctgcaat atcaaacttg taccaaaccc agttagcgat
     2881 tgatttggag atacatttca cttctttttc ccacatcggg acagggaaat ccccatttac
     2941 ccgcatacac tggtaatgca cttctttcag ccagccttgc accgtgtagc cctgctgttt
     3001 gaacgccaac acgtttttgt gcgcccaacg gctcacaagg ttaaacaccg tgcaatttct
     3061 gcttaatccg accgcttcca cgttagagcg accgatatag ggcttaaact tgtctaaatc
     3121 cacgaaatcc gcaagatact ccaaatcgta gcccctgatt gcgtcaggaa cgccgcgcag
     3181 cgtcagccaa tgcggatgtt cgggattttt cgtaatcagc gatacaaagc ccacatcacc
     3241 gcgcaatttc gccttatatg ctgcttcaag tgcagcaaga tagcgcaggg ctttttgtct
     3301 cccaccgtat tccgccgtca gcacaggcgc ggaaagcgca taggcaaggt gtgcgccgcc
     3361 gttttccctg ttgattgccg cccaagcagg cataggcaga ttattgtctt cccaagccaa
     3421 ccccgcccct tcgtaatcca agtcaaagag cataaacaca cgcagatgcg gcggattgac
     3481 ttggatgtag cggcgtttga tggcggcagc gtaagagcgc accagcatag gcgcttcttt
     3541 gaaatctttg cagtatggct tgtgtgggat acgttcttgc aagaagaggt cgggttgggt
     3601 gtataattgg ctcatgttgt atctcgaaac ccccgtgcag attggcgttt ggcgggggtt
     3661 ttgctttgtc taagatttgc agattgtatg cttgttttta agatgataca actatgtcaa
     3721 aataaccata atcagataac agcccgatag gggttcttat ttcaaaattt tccaatccgc
     3781 aatttagcga agccagcagg cgaagcggta aagcttggag cgcagcagcg cgacctaagc
     3841 cggccagcag ggcggcgttt tgggggaaac atgaaaccag ttccgacagg gcggcgtgcg
     3901 tgttcttccc ggagttcttc atggagtatc ggcgaaatgc cgtgatgaaa tgccgttttt
     3961 ttgagcagaa agcagtcaaa aacaggggta ttttgccctt ttgacaggtt cgagtgccgc
     4021 cgaaaagcga acaaagcaac tcatcatccg agtcagcccg accgagtttg agactttgac
     4081 ccgacagaag acccatccga atttagcccg ctacattcgg gagcgggttt tggaagatgg
     4141 caaagcatcc gac
//
LOCUS       DAXGCP010000130         3968 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.131, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000130 DAXGCP010000000
VERSION     DAXGCP010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.131"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..151
                     /locus_tag="ACFJCW_002050"
                     /pseudo
     CDS             1..151
                     /locus_tag="ACFJCW_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            148..327
                     /locus_tag="ACFJCW_002051"
                     /pseudo
     CDS             148..327
                     /locus_tag="ACFJCW_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003762769.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas5"
     gene            324..1610
                     /gene="cas8c"
                     /locus_tag="ACFJCW_002052"
                     /pseudo
     CDS             324..1610
                     /gene="cas8c"
                     /locus_tag="ACFJCW_002052"
                     /inference="COORDINATES: protein motif:HMM:NF021243.4"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas8c/Csd1"
     gene            1630..2390
                     /gene="cas7c"
                     /locus_tag="ACFJCW_002053"
                     /pseudo
     CDS             1630..2390
                     /gene="cas7c"
                     /locus_tag="ACFJCW_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777774.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-C CRISPR-associated protein Cas7/Csd2"
     gene            2417..2785
                     /locus_tag="ACFJCW_002054"
     CDS             2417..2785
                     /locus_tag="ACFJCW_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152097.1"
                     /translation="MKYWLVGASWGGQGHQDQFFVENGYWVLEWESSQQPDQFAKGEK
                     IQVGDRIAIKRMKGQGSSEIKILHIGIVKGVISETNKIICVVDWIVKNLDRNVESRGC
                     FKSIHDPYDKDEWIEKIFCL"
     gene            2792..3442
                     /gene="cas4"
                     /locus_tag="ACFJCW_002055"
     CDS             2792..3442
                     /gene="cas4"
                     /locus_tag="ACFJCW_002055"
                     /EC_number="3.1.12.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043571 - maintenance of CRISPR repeat
                     elements [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CRISPR-associated protein Cas4"
                     /protein_id="HFC4152098.1"
                     /translation="MTALLTETQRENQDTRLIPLSALQHYAFCPRQCALIHNAQAWAE
                     NCLTAQGKALHERVDSGEPETHKGVRFERTVHVSAEKPGISGILDLVEADTKTGRLKP
                     VEYKRGKPKPDPGDEIQLCAQGLCLEEMTGQTVSEGALWYMQTRHRVPVVFSDGLRAQ
                     TLATIAAVCKLLNSGQTPPPDYGKRCKACSLAEICQPELLGKRDRSVGYVKGLFGE"
     gene            3558..3917
                     /locus_tag="ACFJCW_002056"
     CDS             3558..3917
                     /locus_tag="ACFJCW_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152099.1"
                     /translation="MTRNIEHQFSNLSDVGEKLELENPTVENVVDILVDIGHDDRVYT
                     FHDDFLGLKSGLPQDLLSKHIDELEEGDFADRYSDEIDKILDNANIIFYHLERELSEN
                     DLEEIREERERLGLEDD"
BASE COUNT         1133 a          911 c         1007 g          917 t
ORIGIN      
        1 acaagacccg gccaaagtaa cgcattattt gacacggccg gccggatttt ccgactgcca
       61 acgcgtttgt ccggatgaaa caggattcga ccgccgcctg ttccgcccct atgcccgcag
      121 cctgaaaggg caaatggcga aagcgcggat aagggtgaac cgctgccgcc gtcggcgtta
      181 tcggaaagcg aggcaaaccg cgatttgggc tggatgctgc acgatattga ttttgatcac
      241 ggcaacacgc cgcatttttt ccgcacgcaa atgaaagacg gcttgattga tgtgccgccg
      301 ttttacgccg aggaggtgaa agcatgattc ttgcgtccct tgtccgctat taccgccgtt
      361 tggcaacgga aaccgatgaa acgggcaacc cgaaagtgcc gtcttatggt tttagcgagg
      421 agaaaatcgg ctggattttg gtgttggata aagaaggtcg tctgaaaacc gttgtgccga
      481 atctgactgc tgataaaaag ccgcagccga agctgatgag tgtgccgcgc cctgaaaaac
      541 gcacgtcggg tatcaaaccg aattttttgt gggataaaac cgcctacgcg cttggcgtgg
      601 aagccaataa aaacaaagcc gaagccaaag aaaaaccgtt tacgccgtct gaaaaaacct
      661 ttgaagcctt caagcaatac catctcgatt tactgcaaaa cagcgaagac gaaggtttac
      721 aagccttatg ccgttttctg caaaactggc agcctgcaca tttcgctgcc gaaaacctgc
      781 ctgccgaaat gcttgattcc aacaccgcat tttctcttga aaaaccgacc gctcttatcc
      841 ataaacgcga agccgcgcaa accttgtggg caggctgcct gaaaagtgat gaagcactcg
      901 aaagcttatg cctgattagc ggcgacaccg cgccgattgc acggctgcat ccggcgatta
      961 aaggcgtgtt tggcgggcaa agctccggcg gttcgattat ttcgtttaat aaagaagcct
     1021 tttcctcttt cggaaaagag caaggcgcaa atgcgcctgt ttccgaacaa tccgcctttg
     1081 cctacaccac cgcgctgaac tatctcttgc gccgcgaaaa taatcactgc ctgaccatag
     1141 gcgatgccag cacggtcttt tgggcggaag cggatgatat agtggattaa atttaaatca
     1201 ggacaaggcg acgaaaccgc agacagtaca aatagtacgg caaggcgagg caacgccgta
     1261 ctggtttaaa tttaatccac tataacgcca cggcgcaggc tgccgaaggc ttcttcgcgc
     1321 aagtgtttac gccgtcggat gacgaacaag aaagcgccaa aattttcaac gtattggaac
     1381 aaatcggcaa aggtcgtccg ctgcaagaaa ttgcgcctga actctctccc aatacccgtt
     1441 tttacatctt ggggcttgcc cccaatgctg cgcggatttc tgttcggttt tggctggaca
     1501 ccacatttgg gcagctggcg gaaaacttgg cgcatcattg gcaagattta gcccttgagc
     1561 cttgcgcgtg gaaaacgccg ccgtctattt ggcggctctt gttgcaaact gccgtgctgg
     1621 gcaaaagcga aaacatccaa aggcttggta accgatgtct gcctgaaacg caaaatccgt
     1681 aattttgtcg aaatcagcag cgaaaacgaa gccggttacg aaatctacgt caaagaaaaa
     1741 agcgtgctga acctgcaaaa caaacgcgct tatgaagcac tcggcattga gtctgaagcc
     1801 aaaaactgcc gaaggacgaa gccaaagccc gtgacattac cgcgtggatg tgtaaaaact
     1861 tcttcgatat tcgaaccttc ggcgctgtga tgaccaccga agtcaacagc ggacaagtgc
     1921 gcggcccggt acaactggcg tttgctcaat ccatcgaccc gattgtgccg ccggaagttt
     1981 ccatcacccg catggcggta accaatgaaa aagacttgga aaaagaacgc accatggggc
     2041 gcaaatacat cgtcccttac gtggtctacc gcgtgcatgg ctttatctcc gccaaccttg
     2101 ccgccaaaac cggtttttca gacgacgact tagccaaact ctggcaagcc ctgacgttga
     2161 tgtttgaaca cgaccgctca gccgcccgtg gcgaaatggc ggcacgcaaa ctggttgttt
     2221 tcaaacacga cagcgcactc ggcagccagc ctgcacataa actgtttgac accgtaaaag
     2281 tcgaacgcgt aaacggcgaa tcaggtacgc ccgcaagcgg ttttggcgat tacaaaatca
     2341 gcgtggtttc agacgggcta aatggcgtga gtgtggaaga gtatttgtaa gttttcaata
     2401 aatcaggagt aacgatatga aatattggct agttggagcc tcttggggag ggcaggggca
     2461 tcaagatcaa ttttttgttg aaaatggtta ctgggttttg gagtgggaat cctctcaaca
     2521 accagatcaa tttgcaaaag gagaaaaaat ccaagtaggt gatcgaattg caatcaaacg
     2581 catgaaaggt caaggatcgt ctgaaattaa gattttacat attggaatcg ttaagggggt
     2641 tatttctgaa acgaacaaaa ttatctgtgt cgttgattgg atagttaaaa atttagatag
     2701 aaatgttgaa agtagaggat gctttaaaag tattcatgat ccatatgata aagatgaatg
     2761 gatagaaaaa attttttgtt tgtagcaaaa gatgaccgca cttttaaccg aaacccaaag
     2821 ggaaaatcag gatacgcgcc tgattcccct ttccgccctg caacactacg ccttctgccc
     2881 gcgtcaatgt gctttgattc acaacgcgca ggcgtgggcg gagaactgtt tgaccgcgca
     2941 gggcaaggca ctgcatgagc gggtggattc gggcgagccc gaaacgcaca agggcgtgcg
     3001 ttttgagcgg acggtacacg tttcggcgga aaaaccgggc atcagcggca tattggattt
     3061 ggtggaagcg gatacaaaaa caggccgtct gaaacctgtg gaatacaaac gaggcaagcc
     3121 caaacctgac ccgggggatg aaatccagct ttgcgcccaa ggtttgtgtt tggaagaaat
     3181 gacggggcaa accgtttcag agggcgcgct gtggtatatg caaacccgcc accgcgtccc
     3241 cgttgtgttt tcagacggtc tgcgcgccca aaccctcgcc accatcgccg ctgtgtgcaa
     3301 actcctaaac agcggccaaa ccccgccgcc cgactacggc aaacgctgca aagcctgctc
     3361 gctggcggag atttgccagc cggagttgct gggaaaacgg gataggagtg tgggatatgt
     3421 gaaggggttg tttggggagt aatattttat ttgaaaaaaa ctattacgtt aattaacttg
     3481 aatcttccaa attaatcgca atttctgaaa acgagcaatc atgctcaatt gtaattacac
     3541 attttaagga gtcgtaaatg acaagaaata tagaacatca atttagcaat ctatctgatg
     3601 ttggtgaaaa actagagtta gaaaatccta ctgtagagaa tgtcgtagat attttagtgg
     3661 atattggaca tgatgaccga gtttatactt ttcatgatga ctttctcggg ttaaaaagcg
     3721 gtttgccaca agacttattg tcgaaacata tcgacgagct tgaagaaggt gattttgcag
     3781 atagatattc agatgaaatt gataaaatac tggataatgc aaatataata ttctatcacc
     3841 ttgaacgaga gcttagtgaa aatgatttag aggaaatacg agaagaaaga gaaagactgg
     3901 gtttagaaga cgattagtat acttgttgtc atagaataga ttcaatacat acaggttggg
     3961 ttatgctg
//
LOCUS       DAXGCP010000131         3926 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.132, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000131 DAXGCP010000000
VERSION     DAXGCP010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3926
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.132"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(237..452)
                     /locus_tag="ACFJCW_002057"
     CDS             complement(237..452)
                     /locus_tag="ACFJCW_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152100.1"
                     /translation="MPSESPSDGICFPKRIILPQAYANPFYRIGNSKKNPFHSHAGKP
                     VFDFGYFWLFRVIYESSFPQKRESVFL"
     gene            complement(483..3251)
                     /gene="tdfH"
                     /locus_tag="ACFJCW_002058"
     CDS             complement(483..3251)
                     /gene="tdfH"
                     /locus_tag="ACFJCW_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HFC4152101.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSGENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRGVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQEGGLKFNSNSGKWER
                     DFQRPYWKTKWYQKYNDPQELQKYIEGHDKSWRENLAPQYDITPIDPSGLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNPYTNLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNAINYRFGGEYTGYYGSENEFKRAFGENSPAYKEHCDPSCGLYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFAGYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDILGLKLVGYRSRIDNYIHNVYGKWWDLNGDIPSWVGST
                     GLAYTIRHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTTGANTSDVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADKTLCNGKYGGTSKSVLTNFARGRTF
                     LMTMSYKF"
     gene            complement(3856..>3926)
                     /locus_tag="ACFJCW_002059"
     CDS             complement(3856..>3926)
                     /locus_tag="ACFJCW_002059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4152102.1"
                     /translation="WGRLENTRFKTHEASLGVRYRF"
BASE COUNT          882 a          974 c         1026 g         1044 t
ORIGIN      
        1 atcatctgcg cggtaatgat gagattttag gttgtgggat ttatcggaaa aacagaaacc
       61 tctccgccgc cattctcacg aaagtgggaa tccggaaagc taaagccaca ggaatttatc
      121 ggaaatggct gaaatttata gtggattaac aaaaatcagg acaaggcgac gaagctgcag
      181 acagtacaaa tagtacggca aggcgaggca acgccgtacc tgtttttgtt aatccactat
      241 aaaaaaactg attcccgctt ttgcgggaat gacgactcat aaattacccg aaacaaccaa
      301 aaataaccga aatcaaaaac cggcttccct gcgtgggaat gaaatggatt tttctttgag
      361 ttgccgatgc gataaaacgg attggcatag gcttgcggca ggatgatgcg tttggggaaa
      421 caaatgccgt ctgaagggct ttcagacggc attgcagttt ttccacaaaa cgcgggctgc
      481 ctttaaaact tgtagctcat cgtcatcaag aaggtgcgtc cgcgtgcgaa attggtcaat
      541 acgcttttgc ttgtgccgcc gtatttgccg ttgcacaacg ttttatcagc attacacgtt
      601 acgtcttcgt ccttgtcttt cgggtcgaac gagctgtaat aacgctgcgt tgccgcatca
      661 ttgcccgcat cgagcggatc gatataacgc ctgtcgaaca ggtttttgac ttcggcgcgg
      721 aaaataaggt ttttcttcgg ctcgtaagcg gcgtaaaaat caaaaatcaa aggctgtcgg
      781 gcaagggttt cggtttgttt gatggaacgc ttgcccagtt gccggacatc gctggtattt
      841 gccccggtgg tgccgtcgat atagcgttct tcagccgtcg cgcggatgct cttgccgaaa
      901 tagcgcatcg cgccgcccaa agtcagtttg ttgcccaacc agcgcgtacc gacttccaaa
      961 cgtccgtaat ctcgcggcag ggcggaaacc ctgctcaacc cataaccttg tttgagttgg
     1021 tcttctttgg acgcattgtt gggcgattcg ctcgcatcgc tgaaattggt cggttgcgtg
     1081 cttttttgat aggcgtaaga aaggttggtg aaaaaacgcc cataatcgta attcagctcc
     1141 agctcaaaac cgtgtttgtg cactttgtct ttgaaattgc ggtgtcggat ggtgtaggca
     1201 agcccggtgc tgccgaccca gctcggaata tccccgttca aatcccacca tttcccgtaa
     1261 acgttgtgga tgtagttgtc aatgcggctg cggtagccga ccagtttcaa tcctaatata
     1321 tcatcttgtt ttaacaatcc ttttttatag gtattgaagc caaattgcca agtgtttgcg
     1381 cgctctggtt ttaaggcggt gtgaacgccg gagtcgccga tttgggaaaa atacatttct
     1441 tggatgttgg gcatacggtg tgtgcgcgaa tagccggcga acggcatgaa ataatcgccg
     1501 aagtccgcac taatgctgac cgaatggttg ttggcgcgct ttttgccgta ttttttcaat
     1561 acgggttcat aaagcccgca gctcgggtcg caatgttcct tgtatgccgg cgagttttct
     1621 ccgaatgccc gcttaaattc gttttccgag ccgtaatagc ccgtatattc gccgccgaaa
     1681 cggtagttga ttgcattggt gctgtagttt aagcggtaaa tgtctttttt gagcgcggca
     1741 tcgaagtaga acgtgttgaa atattgactg ccggccggtt ggacgatggt tgatttttgg
     1801 ggcagcagcc ctttatcgcc cttaaaccgc cccaaatagg aataaagccc gttgtcctga
     1861 tccggaccgt cgaaaaacag ccccaattct tcaggaaagc ggtttttgcc gtattcgttg
     1921 tggaaataat tgaagcccaa agtggtttgc aactcggttt cgcggggcag ccggaaggtg
     1981 gcggtgttgt tgaggtcgag gatttttgcg ttgttgtagg tttcaaaatc ctttaaaagc
     2041 ccccagcctg taaacttcga ccctttcgga tatttctgcc tgcccgaatt gtaggctgcg
     2101 gtcagattga ggttggtata cgggttcaaa gacaaaccgt aattgaattg ataattgcgg
     2161 ttgatgattt tgcggctgcc gattttggtg tttaaatcgc gaaattgcgc cgtgtattta
     2221 ttgaatacgc cgtcgtattc caatttaaac agattacctg ccgactgctg cttcaggccg
     2281 gacggatcga tgggggtgat gtcgtattgc ggcgccaggt tttcccgcca gcttttgtca
     2341 tgaccttcga tgtatttttg cagttcttgg gggtcattgt atttttgata ccacttggtt
     2401 ttccagtacg gcctttggaa atcccgctcc cattttccgc tgttggaatt gaatttcaac
     2461 ccgccttctt gtacaaaata tcgctgcttg cgccgttcca gatattccgc gccaaaattt
     2521 ccgatgtgct gcccgccgcc gcccacgcgg taattttgcg ccacgccgcg cctgctgtgc
     2581 ccgtaaagca caccgacaga tgctccgctt tccagccatt tgcgcgcacc tatcgccgcc
     2641 atcgcattac ctttggttga attggtgccg gtcagacctt ttagcagcag gccgtaggta
     2701 ttattgccct gaacgacgtc atccacgcct aaagtccgca gattcgccga accggcaagg
     2761 ctgttgatgc ctgccgagcc gctgaagctg cctttgacga catccagtcc ggcaataaaa
     2821 ttgctgtcga cagatgcacc gaattgagat gaaccgcctg ccctgcccgc atcggtagaa
     2881 gtcgaataaa aggtctgcgt gatgccgtcc accatcgtat tgacccgccc gaacccgctg
     2941 tcgccgcgaa tattcaaaga cacaatgccc gagcttttat cttgctgtgt aaacgcaccg
     3001 ggtatgctgc gtacgatgtt gtcgaggttt tcgccggatt tgaatatatc ctgacgggtc
     3061 gatacggcac gcgcatcggt aaacactttt ttgtctttcg gtacgcgctt cgccttgacg
     3121 tgcacgtctt ccaaaacctg tatctgcgcc tcgctgcccg cgcgccctgc atcttctgca
     3181 taactatgat gatatagcat aacacccata agataaaaac aaatcggctt caaccggaaa
     3241 gaagatctca tattttcctc aacaataaac aatcaatcca acatgtctac cgttttcatc
     3301 gaatccgcct tttcgaccac ccggccctac gcaaccgaac cgtcattccc acggaagtgg
     3361 gaatctagga cgcggggttt cagttatttc cgatagattc ccgccgcgtc aggggtccgg
     3421 attcccgcct gcgcgggaat gacgggtttc gagattgcgg tgttgtcgga cgggtttcga
     3481 gattacggtg ttgtcgggaa tgacggttcg ggtattttac tgcgcccgcc ccgcgcctgt
     3541 aaacggcagg tgcatcaaaa atgccgtctg aaggttcaga cggcatcggt gtcggggaat
     3601 cagcgggccg tagcaaccga accgtcattc ccacggaagt gggaatctag gacgcggggt
     3661 ttgggcaact gtttttatcc gataagtttc cgtgcggaca gatctagatt cccgcctgcg
     3721 cgggaatgac gaatttcgag attgcggtgt tgtcggggat gacggttcgg gtatttccac
     3781 gcccgccccg cgcctgtaaa cggcgggcga ttaaaaatgc cgtctgaagg ttcagacggc
     3841 atcggaatcg gggaatcaga agcggtagcg cacgcccaat gaggcttcgt gggttttgaa
     3901 gcgggtgttt tccaggcgtc cccaat
//
LOCUS       DAXGCP010000132         3781 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.133, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000132 DAXGCP010000000
VERSION     DAXGCP010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.133"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            119..541
                     /locus_tag="ACFJCW_002060"
                     /pseudo
     CDS             119..541
                     /locus_tag="ACFJCW_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
     gene            complement(596..1051)
                     /locus_tag="ACFJCW_002061"
     CDS             complement(596..1051)
                     /locus_tag="ACFJCW_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-helix bundle copper-binding protein"
                     /protein_id="HFC4152103.1"
                     /translation="MNRRQFLGSAAAVSLASAASFARAHGHADYHHHHDMQPAAASAY
                     TAVRQTAAHCLDAGQVCLTHCLSLLTQGDTSMSDCAVAVRQMLALCGAVHDLAAQNSP
                     LTRDAAKVCLEACKQCAKACKEHSAHHAECKACYESCLDCIKECEKLAA"
     gene            complement(1307..2677)
                     /gene="ffh"
                     /locus_tag="ACFJCW_002062"
     CDS             complement(1307..2677)
                     /gene="ffh"
                     /locus_tag="ACFJCW_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HFC4152104.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFVNNVKEKALGQEVAGSLTPDQAFIGVVNQALVELMGKENKTLDLSVSPPAI
                     ILMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAVVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLNGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLQKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKAGRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRLAKGMKGMK
                     GMFPGL"
     gene            2897..3703
                     /locus_tag="ACFJCW_002063"
     CDS             2897..3703
                     /locus_tag="ACFJCW_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HFC4152105.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDFPFMLHIGTSLLAYGLFGIATLLSVLSLLLHRSLHRRNF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILKR"
BASE COUNT          833 a          937 c         1016 g          995 t
ORIGIN      
        1 ttcggcattg ccgacaatgg ccgttgcgtc aaaagtcaac ttggatatgt ccaatcctac
       61 ggtgttacgc atgggattac ccttatatat tgcgtcccta agaaggggcg caatatataa
      121 ggtgtggcaa tttgtcgaag acgcgctgcg tgccgtcgtg cctgccgaca gttttgaacc
      181 gaccgcgcaa aaattgaagc tgtttaaggt gggcgcggca accattttgt tttatgaaga
      241 tcaaaatgtc gtcaaaggtt tgcaggagca gttccctgct tatgccgcca actttcccgt
      301 ttgggcggac caggcgaacg ctatggtaca gtatgccgtc tggacgacac ttgccgcggt
      361 cggtgcaggt gcaaatctgc aacattacaa ccccttgccc gatgtggcga ttgctaaagc
      421 gtggaatatt cccgaaaact ggctgttgcg cgcgcaaatg gttatcggtg gtattgaagg
      481 ggcggcaggt gaaaaggtct ttgaacccgt tgcggaacgt ttgaaagtgt tcggcgcata
      541 atttcgcggt caaaaaaatg ccgtctgaac cccgttcaga cggcattttt cagtatcagg
      601 cggcgagttt ttcgcattct ttgatacagt cgaggcagga ctcgtaacag gctttgcatt
      661 ccgcatggtg ggcggagtgt tctttacagg ctttggcaca ctgtttgcac gcttcgaggc
      721 acacttttgc cgcgtcgcgt gtcagagggg aattttgtgc ggcaaggtcg tgcaccgcgc
      781 cgcataaggc aagcatctgg cgcacggcaa ccgcacagtc ggacatagac gtgtcgccct
      841 gagtgagcag ggacaggcag tgggtcaggc aaacctgtcc ggcatccaga cagtgtgcgg
      901 cagtttggcg gacggcggtg taggcggatg cggcggcagg ctgcatatcg tgatgatggt
      961 ggtagtcggc gtgtccgtgc gcacgcgcga aagaggcggc ggaagccaaa gagacggcag
     1021 cggcgctgcc caaaaattga cgacggttca tgattttttc ctttatgttt caacatgcgg
     1081 gtccggtata aggtacacac ttaccatact gccctggccg gatcggtacg attttctgaa
     1141 taattgcttg attttgcagg tgtgaaattg tcgcacgagc aggcatgttt tagctattcg
     1201 gaaattcgag gaagggtgca tcaacctgtt ttgaaatgat gcgcagacat ggtaacagac
     1261 aaaaagccgt ctgaaaatcg ttttagacgg cttttgtttt caaacattaa agaccgggaa
     1321 acattccctt cattcccttc atgcctttgg ccaagcgcat cagtttgccc aaaccgttgc
     1381 cgctgaacat cttcatcatc tgctgcattt gttcaaactg tttgagcaat ttgttcactt
     1441 cctgcacggt cgtgcccgcg cccatcgcaa tacggcgttt gcggccggct ttgagcaggg
     1501 cagggttggc gcgttcttta ggggtcatcg agttgatgat ggcttctact ttgcccatcg
     1561 ctttttcagc cgtaccttcg gggatttgtt tcgatatttg acccagttcg cccggcattt
     1621 tcgacatcag gttttccaaa ccgcccatat tgcgcatttg ctggatttgt tctttaaaat
     1681 cattgaggtc aaagcctttg cctttttgca gctttttcgc cattttggcg gcggcttctt
     1741 catcaatacc tttttgaacg tcttcaatca gggtcaatac gtcgcccatg ccgaggatac
     1801 ggctggcaag acggtcgggg tggaaaggtt cgaggccgtt gattttctcg ccgacgccga
     1861 taaatttaat cggtttgccg gttacatggc gtacggacaa tgccgcaccg ccgcgcgagt
     1921 cgccgtccat cttggtcaat acgacgccgt tcagcggcag ggcttcatta aatgcctgag
     1981 cggtatttac cgcatcctga cccagcatgg catcgataac gaacaaagtt tcaaccgggt
     2041 tgaccaccgc atgaagcgct ttgatttcgt tcatcatctc ttcatcgatt gccaaacggc
     2101 cggcggtatc gaccatcaat acatcgtaaa aatgtttttt ggcgtaatca acggcggcag
     2161 ttgcaatctc aaccggtttt tggttggtat cggatgggaa aaaatctacg ccgacctgtt
     2221 cggccaacag gcgcagctgt tcaatcgcgg cagggcggta aacgtcggcg gataccacca
     2281 aaactttttt cttctgatcg tttttcagca ggcgggcgag tttgccgacg gttgttgtct
     2341 taccggcacc ctgcaaaccg gccatcaaaa tgatggcagg cggtgaaacc gataaatcca
     2401 gtgttttgtt ttccttgccc atcagttcga ctaaggcttg gttgaccacg ccgataaagg
     2461 cttggtcagg cgtcaggctg cccgccactt cctgaccgag ggccttttct ttgacgttgt
     2521 tgacgaactc tttgacgaca ggcagggcga catccgcctc aagcagggcg agtcggactt
     2581 cgcgcaaggc ttctttaata ttgtcttcgg tcagtttggc ctgcccccgg atgtttttga
     2641 agacattgct gaagcggccg gttaaattgt ctaacatact ggtccttggt ctgaataaga
     2701 atagcttgcc ccatcagggg cattctttgt taaaataaaa tcaaaataat ttgatgcggc
     2761 ttgtgtgccg gacagcatat cggcaaatcc gtcaaggctt gcccgaaacg gggattttac
     2821 aattccaacg ttaaaagttc caatatttca taagcggccg catacggcgc aacagtatag
     2881 atagagaaag tccaccatgc cgacagtttt catctttttg acggcggttt acgcaggatt
     2941 gggtgcattt gcatggcact gccaacagca ggggcgcggc cgggattacc cgtggaagac
     3001 ggaattgccg gttttgggcg cggcattgac cgtccacggc gcggcactgc tgatgccggt
     3061 cattcaagac aaaatcatca ttatgggctt cgggtattcc ggcagcctga ttgtttggat
     3121 gatgctgttt atttattttg ccggcagctt tttttatccg ctgcgcggag tgcagttgct
     3181 gctgtatcct tgcgccgcac tgatgctgct gtcaggtttg gttttcccgg gaaaattctc
     3241 gggatatgaa attaccgact ttccctttat gctgcatatc ggcacatcac tgcttgcata
     3301 cgggctgttc ggcatcgcaa cattattgtc cgttttgagc ttgctgctgc accggagcct
     3361 gcaccgcaga aacttctcca agctcgcagg attcctgccg tcgctgctca gtttggaaaa
     3421 actcatgttc caggccatgt gggcaggttt catcctgctg acctattccg tcgtcagcgg
     3481 cacattcttc gccgaagccg tattcggcaa acccatgaca tttacccata aaaccgtatt
     3541 cggcatattg tcatggctga tttacggagg actgctgctc aaacacagca tgaccgcatg
     3601 gcgcggcaaa aaagccgccg tgtggaccat catcggattt gtcagcctta tgattgccta
     3661 tatgggcagc aagttcgtat tggaaatcat tctgaaaaga taagaagagc caacagatgc
     3721 cgtctgaagc cccgagtttc aggcggcata ttcacaaagg cgcatcagcc ggaggagaag
     3781 a
//
LOCUS       DAXGCP010000133         3778 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.134, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000133 DAXGCP010000000
VERSION     DAXGCP010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3778
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.134"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            27..806
                     /gene="map"
                     /locus_tag="ACFJCW_002064"
     CDS             27..806
                     /gene="map"
                     /locus_tag="ACFJCW_002064"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HFC4152106.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGITTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGGVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPATGKP"
     gene            905..1204
                     /locus_tag="ACFJCW_002065"
     CDS             905..1204
                     /locus_tag="ACFJCW_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4152107.1"
                     /translation="MKIFENIEDVKAIRKKTGMNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECLDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKAERKKQG"
     gene            1442..1813
                     /locus_tag="ACFJCW_002066"
     CDS             1442..1813
                     /locus_tag="ACFJCW_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC4152108.1"
                     /translation="MKLLTTAILSSAIALSSMAAAGTDNPTVAKKTVSYVCQQGKKVK
                     VTYGFNKQGLTTYASAVINGKRVQMPINLDKSDNMDTFYGKEGGYVLSTGAMDSKSYR
                     KQPIMITAPDNQIVFKDCSPR"
     gene            complement(2000..3466)
                     /locus_tag="ACFJCW_002067"
     CDS             complement(2000..3466)
                     /locus_tag="ACFJCW_002067"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HFC4152109.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGADGVINPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCRYLQKRYDVFKTQKLFENMEFSTDRNKISDWAPLIMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNLDWQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGLPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSFMDLPL
                     SIHMDNLYPMLRAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEGRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT          981 a         1065 c          929 g          803 t
ORIGIN      
        1 gcacacccgc aatccaagga agcattatga acggcatcat catcaaaacc cccgaagaaa
       61 tcgaaaaaat gcgcgagctg ggcaaactcg tcgccgaagc cctcgactac atcggacaat
      121 tcgtcaaacc cggcatcacc accgacgaaa tcgacaaact tgtttacgac taccacgtca
      181 acgtccaagg cggctatccc gcccccctcc actacggcaa cccgccctac cccaaatcct
      241 gctgcacctc cgtcaaccac gtcatctgcc acggcattcc cgacgacaag ccgctcaaag
      301 aaggtgacat tatcaacatc gacctcacca tcaaaaaaga cggtttccac ggcgactcca
      361 gccgtatgtt taccgtcggc aaagtctccc ccatcgccca acgcctgatc gacgtaaccc
      421 acgcctctat gatggcgggc atagaagccg tcaaacctgg cgcgacgctg ggcggcgtag
      481 gttacgcctg ccagcaggtt gccgaaaatg caggttattc ggttgtacaa gaattctgcg
      541 gacacggcat cgggcgcggt ttccacgaag ccccgcaagt gttgcactac ggaaaaaaag
      601 ggcagggtcc cgttctaaaa ccgggtatga tttttaccgt cgaaccgatg atcaaccaag
      661 gcaaacgcca cctgcgtatc ctcaacgacg gctggacggt ggttaccaaa gaccgctccc
      721 tctccgccca atgggaacac gaagtcttgg taaccgaaac cggctacgaa atcctcaccg
      781 tcagccccgc caccggcaaa ccctgaagct gtatgcaata taaaaacagg cttgacccgg
      841 cacattacga aaacaaagca aatcggaatt tgccccgcaa ccagaaaaac ttaaaggaag
      901 ttttatgaaa atatttgaaa atatagaaga tgttaaagcc atccgtaaaa agaccgggat
      961 gaaccagata gacttctggg gcaaggtcgg cgttactcaa tccggaggtt cacgctacga
     1021 aaccggccgc aagatgccca aacccgtacg cgaactgctc cgcctcgtcc atatcgaatg
     1081 cctcgatttg gcaaaagtca acaaaaaaga tatggaaatc gccgccctgt tgaaaaaaca
     1141 ccatcccgac ctgtatgccg aattgtccaa acagaccaag gccgaaagaa aaaaacaagg
     1201 ttaaaccgca acctccggat gcccggaggt ttttcatttc cgaaaaatgc aaacaatgcc
     1261 gtctgaaaca ccggacaggc cgccgtatcc cgcctgccgc ccctgcctca aaccgccgaa
     1321 ccgcccgaac ctgccttttt acaaacttta tccaatttcc tgtttatttc aggatacgcc
     1381 gacattagac tgtcaaacag tccgaaacgg gcaaactcca catctatcca aaggaataaa
     1441 aatgaaactt ctgaccactg caatcctgtc ttccgcaatc gcgctcagca gtatggccgc
     1501 cgccggcacg gacaacccca ccgttgccaa aaaaaccgtc agctacgtct gccagcaagg
     1561 taaaaaagtc aaagtaacct acggcttcaa caaacagggt ctgaccacat acgcctccgc
     1621 cgtcatcaac ggcaaacgtg tgcaaatgcc catcaatttg gataaatccg acaatatgga
     1681 cacgttctac ggcaaagaag gcggttatgt gctgagcacc ggcgcaatgg acagcaaatc
     1741 ctaccgcaaa cagcctatta tgattaccgc acctgacaac caaatcgtct tcaaagactg
     1801 ttccccacgt taatcaggca acaaaaaaca gcgttttcat ttctgaaaac gctgtttttt
     1861 gaccgttcca ttattcgcaa aagggaaaaa acgattacct gccccgtgta tcaaaacctg
     1921 ccctgccgga tgaagggcat aaccggcagg gacggcgtca acaccatatg ggggtacggc
     1981 ttttcttgaa agattcggtt taaatatcca acactttcgc ggtataggcg ataatttcat
     2041 ccgccctttc agggttttcg ttcaacttga tgccgtaacc cggtaccagc tctttcagac
     2101 gaccttccca agacggggcg cgctcgggga agcattggtg catcagccgg atcatcagcg
     2161 gcacagcggt cgatgcgccc ggcgacgctc ccagcaatgc ggcgagcgag ccgtcggcgt
     2221 gggcgacaat ctccgtacca aactgcagca cgccgccttt ttcggagtct tttttaatga
     2281 tttggacgcg ttgccctgcg gtgatgagtt cccagtcgtc ggggtttgcc tcggggtagt
     2341 attccagcag ggaggcaaag cgttcttctt tggttttacg caattcgccc agcaggtatt
     2401 tggtcagcgg catattcgcc cagccggcgc gcagcatagg atagaggttg tccatatgga
     2461 tggacagcgg caaatccata aacgagcctt gcttgaggaa gttggaacgg aaacctgcgt
     2521 aaggaccgaa cataaggtgt cgtttgccgt ctacgttgcg tgtgtcgagg tgcgggacgg
     2581 acatcggcgg cgcgccgacg gaagcctgcc cgtacacttt ggcgttgtgt tgttcggcgg
     2641 tttcggggtt gctgttgcgg aagaacaggc cggacacggg taagccgccg tagcctttgc
     2701 cttcggggat gccggatttt tgcagcaggg tcagtgcgcc gccgcccgcg ccgaggaaga
     2761 ggaagcgggt gcggagggta agctgccagt ctaggttgcg ggtatcggcg gttttgagca
     2821 cccacgcgcc gtcggattcg cgtttgatgt cttcgacgtg gcggttgaac tcggttttta
     2881 cgcccttgcc ctgcaaatat ttcaccatct ggcgcgtcag ccgtccgaaa tcgacatccg
     2941 tgccttcggc ggaatagttg gcggcgacgg gttggttttc gtcccggccg cgcataatca
     3001 gcggagccca atcggaaatt ttgttccgat cggtggaaaa ttccatattt tcaaaaagtt
     3061 tctgcgtttt aaacacatca tagcgttttt gcaggtaacg gcagtggtct tcgttcatca
     3121 ccaaagacat atgcggcacg gcattgatga aggaattgtc ttccaacttg ccttccgcga
     3181 ccagcgtcgc ccaaaactgg cggctgacat gaaactgttc ggcaatattg agggcgcgcg
     3241 ccggattgat gacgccgtcc gcacccagcg gcgcatagtt caattcgcac agcgcggaat
     3301 gccccgtgcc ggcgttgttc cacgcgtttg acgattccaa cgccacatct tccaagcgtt
     3361 caatcagggt gatttcccaa gacggttcga gttctttgag caaaacgccc aaagtcgcgc
     3421 tcataatgcc gccgcccacc aagacaacgt ctgtcgcttc agccatggtt tactcctaaa
     3481 aaacaggcat cttctgccct tatggttatt tgccgtacta caaacgcctg aatcgcaaaa
     3541 gcaggggaaa ccggcaatgg tgtgtgtccg agcacgctgt ttcggggttg gaatgcgttg
     3601 caagtatggc ttccgacacc gcttcagggg cttgtaatat gttatcgtga atgtagtgga
     3661 ttttactggg aaatgcaaag tttttctgtc gcccgccaag ccggggaact gcgaaacaaa
     3721 aaataaaaat agttatttat ctatatatat caaattttta atagacaaaa aatcaaaa
//
LOCUS       DAXGCP010000134         3717 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.135, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000134 DAXGCP010000000
VERSION     DAXGCP010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3717)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3717)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3717
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.135"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            69..1193
                     /locus_tag="ACFJCW_002068"
     CDS             69..1193
                     /locus_tag="ACFJCW_002068"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HFC4152110.1"
                     /translation="MLSKQISNLNSSSNKPKILSLFSGCGGLDLGFHQAGCETVWAND
                     FSHWACESFRKNIGDVIVEGDIEQINPNDPTIPDCDIILGGFPCQDFSMIWKQPGLEG
                     ERGNLYKSFLRFVNAKKPKVFVAENVKGLLTANKKKAIQQIITDFENCGYYVQAKLYN
                     FAEFGVPQFRERVLIVGVRLDTGFDFRHPEPTHNETGENGLKPYVTAGQAISNIPQNA
                     SNNELLKISDKTRRMLELIPEGGNFTDIPKDHPLYVKGMISHVYRRMHRNEPSKTIIA
                     AGGGGTWGYHFPEPRAFTNRERARLQSFPDDFEFVGSTTEVRRQIGNAVPPQGVVELA
                     KSILPIFSDNYEKVDLHEKLVEEKEILFHDRLSKIRGGKQ"
     gene            1190..2227
                     /locus_tag="ACFJCW_002069"
     CDS             1190..2227
                     /locus_tag="ACFJCW_002069"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease PLD domain-containing
                     protein"
                     /protein_id="HFC4152111.1"
                     /translation="MNTVFSNIANAKITEKSLNAVWMDLFKSADEVLMATGYVSNDAV
                     VELHKILELNDHIQKIDLLVGMHYLEGFSHLQYDSLCKLNDFLRHEKRGAVYVSPFVK
                     FHGKMYSFKNYQKINGLIGSANLTCFWDSTERTYETMLHLNGKPAQILQADIQSTIHK
                     LGKNIQEVERPSKFIEHNSHLENCLGVQKIAPEQIRQLFAQTSEYHFSIPAKTEEKSN
                     LNVFFGEGRRDKRGFVKPRPWYEVELIVSKDITSQEGYPVLKSFTVITDDGWQFQCKT
                     SGDYSKNFRSENDLKTLGKWIKGRLESHGCLQNNEKITHETLREYGNDHFELRSTDNP
                     DVWLLSFKGKN"
     gene            2228..>3717
                     /locus_tag="ACFJCW_002070"
     CDS             2228..>3717
                     /locus_tag="ACFJCW_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Z1 domain-containing protein"
                     /protein_id="HFC4152112.1"
                     /translation="MLRTYLNQLTPPELADSVKNTVDGFMEKLSQTEPKIAQNVLLLG
                     NVQSGKTAQVLGVLSALADDGDHKVFLYLTTDSVDLQDQTVKRAKANLKNFIVLSEAD
                     DRSFMEVMKAENPILVVIKKNARVLKRWRNLFASQSSLKGYPLVIVDDEADAASLNTN
                     SDKPAKDASTINKLLNDIKNSCCQSLFIQLTATPQSLLLQHEESDWQPEFIHFFEAGE
                     KYIGGNFVFSDPPSYIVRFIDSELDDMKDESGEIAEGAKQALLSFLITCAEFALCDKA
                     NCNFALHPSYKIQDHQAFSKKIQAFLNDLVQAVNNGEDLAGSFKESYLDLQKTKPDIH
                     HFDEIYEKLTALLENKQISTLVVNSQTETDFDLEKGFNIIIGGNVIGRGLTIPKLQTV
                     YYSRTAKKPNADTFWQHSRIFGYDRDKSLLRLYIPFDVYYFFVQLNQANNLIIGQAKN
                     SGGNIQVIYPKNINPTRKNVLKFDSINQIVGGVNYFPLHPNEDNLS"
BASE COUNT         1204 a          666 c          755 g         1092 t
ORIGIN      
        1 agagcatagt tcacctttaa aatccataca aggattttta tcaaatttat gcataggagt
       61 gaaatcctat gctatctaaa caaatctcaa atcttaattc ttctagtaac aaaccaaaaa
      121 tcctatctct attttcagga tgtggcggtt tggatttggg ctttcatcaa gctggttgtg
      181 aaactgtttg ggcgaacgat ttctcccatt gggcttgcga aagtttccgt aaaaatatcg
      241 gcgatgtcat cgtagaaggt gatattgaac aaattaatcc gaatgatcca actattcccg
      301 attgcgacat cattttaggc ggattccctt gtcaagattt ttccatgatt tggaaacagc
      361 cgggcttaga gggtgagcgc ggcaatcttt ataaaagctt tttacgtttt gtaaatgcaa
      421 aaaaaccgaa agtttttgtt gctgagaatg tgaaaggttt attgactgcc aacaagaaaa
      481 aagccatcca gcaaattatt accgactttg aaaattgcgg ttattacgtt caggcgaagc
      541 tgtataactt tgcagaattt ggcgtacctc aatttcgtga acgtgtgctg attgtcggag
      601 tacgtttgga tacaggattt gattttcgcc atccggaacc gacgcacaat gaaactggcg
      661 aaaacggctt aaaaccatat gtaacagcag gtcaggccat atccaatatt ccacaaaatg
      721 ccagtaataa tgaattactg aaaatcagcg ataaaacacg ccgtatgttg gaattaattc
      781 ctgaaggtgg aaattttacc gatattccta aagatcatcc tttatatgtg aaaggtatga
      841 ttagccacgt ttatcgtcgt atgcatcgga acgagccatc aaaaacaatt attgcagcag
      901 gtggcggtgg tacttggggc tatcacttcc ctgaaccgcg tgcttttact aatagagaac
      961 gagcaaggct tcaaagtttt cctgatgatt ttgagtttgt cggatcaaca actgaagtac
     1021 gtcgccagat tggtaatgct gttcctcctc agggcgtggt tgaactggca aaaagcattt
     1081 taccgatttt ttcagacaac tatgagaaag tagatttgca tgagaaatta gtcgaagaaa
     1141 aagaaatttt attccatgac cgactaagca aaattcgagg gggaaaacaa tgaatacagt
     1201 tttttccaat atcgccaatg ccaaaatcac tgaaaaatct cttaatgcgg tttggatgga
     1261 tttatttaaa tcagcggatg aagtgttgat ggcgacaggt tatgtatcta atgacgcagt
     1321 ggttgagtta cataaaattt tggagctaaa cgatcatatt caaaaaatag atttattggt
     1381 cggaatgcat tatttggaag gttttagcca tttacaatat gacagcttat gtaaactaaa
     1441 tgattttttg cgacatgaga aaagaggagc cgtctatgtt tccccctttg tgaaatttca
     1501 cggcaaaatg tactccttta aaaattatca aaaaatcaat ggattaattg gttctgctaa
     1561 cttaacgtgt ttttgggata gcacggaacg tacttatgaa actatgttgc atttgaacgg
     1621 taagcctgca cagattttgc aggcagatat tcaaagtact attcataagc taggcaaaaa
     1681 tatccaagaa gttgaaagac caagtaaatt tattgaacat aatagccatt tagaaaattg
     1741 tttgggtgtt cagaaaattg caccagaaca gattcggcaa ttatttgccc aaacgtcaga
     1801 atatcatttc tcaattccag ctaaaaccga agaaaaaagt aatttgaatg tattttttgg
     1861 agaaggtcga cgagataaac gagggtttgt caaaccacga ccttggtatg aagtagagtt
     1921 gattgtatcc aaagacatca cttcacaaga agggtatccg gttctgaagt cttttacagt
     1981 tattaccgat gatggttggc aatttcaatg caagacatcg ggggattact ccaaaaactt
     2041 ccgctcagaa aatgatttaa agacacttgg taaatggatt aaaggtcgtt tggaaagtca
     2101 tggctgcctg caaaataacg agaagattac gcatgaaacc ctacgcgaat acggtaacga
     2161 tcattttgag ttacgttcaa ccgataatcc tgatgtttgg ctgctctcat ttaaggggaa
     2221 aaactaaatg ttgcgaacct acttgaacca attgacccct cccgaattag ctgattctgt
     2281 taaaaatacc gttgatggtt ttatggaaaa attgtcacaa accgagccga aaatcgccca
     2341 aaatgtttta ttgctgggca atgttcaaag tggcaaaacg gcacaggttt tgggtgtatt
     2401 aagtgcgctg gctgatgatg gcgaccacaa agtttttttg tatcttacta ctgacagcgt
     2461 agatttacag gatcaaacag tcaaacgagc caaagccaat ctgaaaaact ttatcgtatt
     2521 gtctgaagct gacgaccgaa gttttatgga agtaatgaag gcagagaacc ccatcttggt
     2581 cgtgattaaa aagaatgccc gtgtattgaa acgttggcgt aatttgtttg ccagtcaaag
     2641 tagcctgaaa ggctatcctt tggttattgt ggacgatgaa gccgatgctg ccagcctaaa
     2701 tactaattct gataagccgg ctaaagatgc cagtactatc aataaactgc taaacgacat
     2761 caaaaattcc tgttgtcaaa gcctgtttat ccagttgact gccacgcctc aatcgctttt
     2821 attacaacat gaagaatctg attggcaacc tgaatttatc cacttctttg aagcaggcga
     2881 aaaatacatc ggcggcaact ttgtcttttc tgatccacca agctatatag ttcgttttat
     2941 tgatagcgaa ttggatgata tgaaagacga aagtggtgaa attgccgaag gagcaaaaca
     3001 ggcattgctt agttttctaa taacctgtgc agaattcgcg ctatgtgata aggctaactg
     3061 taattttgca ctacatccaa gctataaaat tcaagatcat caagcctttt caaagaagat
     3121 ccaagccttt ttaaatgact tagtgcaagc agtcaataat ggggaagacc ttgcaggtag
     3181 ctttaaagaa agttatttgg atttgcaaaa gaccaagccc gatattcatc actttgatga
     3241 aatatacgaa aaattgacag cacttttaga gaataaacaa atctctactc ttgtcgttaa
     3301 ctcgcagaca gaaacagatt ttgacttaga aaaaggtttc aacatcatta ttggtggtaa
     3361 tgtgattggt cgtggcttga ctattccgaa actacaaacg gtttattata gtcgcactgc
     3421 caaaaaaccg aatgcagata ctttctggca acattcgcgt atttttggat atgaccgcga
     3481 taaatcatta ttacggcttt atattccgtt cgatgtctat tacttctttg tacaactcaa
     3541 tcaagcaaat aatctgatta ttgggcaggc aaaaaattca ggcggcaata ttcaggttat
     3601 ttatccgaaa aatatcaatc caactcgaaa aaatgtattg aaattcgata gtatcaatca
     3661 aattgtgggt ggtgtgaatt attttccact ccacccaaac gaagataatt tatcgga
//
LOCUS       DAXGCP010000135         3703 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.136, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000135 DAXGCP010000000
VERSION     DAXGCP010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3703
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.136"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            229..990
                     /locus_tag="ACFJCW_002071"
     CDS             229..990
                     /locus_tag="ACFJCW_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152113.1"
                     /translation="MEMQLDKQTLTVVVRNSEPVELSVFAQSMMSLADDYESMCGSAG
                     SHARLYIKEIRQGSIIAELAPLLPLAGTLFEGAGQILAYAKNFIEITDWLMGKGKEPA
                     GVTDSQIRNIANIMQPAASDKNGSIEINVNDNNGSVVNNITYNYFAANTVQNQARRIL
                     GERAEASESGDYGQMVMYFVQAAPTKETNQAVIEGIYSRPVKILIPEHIKREMFAEPY
                     PFEKYYIVDVSVQTARGKPRLYKVTGYHGVVDGDD"
     gene            complement(1089..1490)
                     /locus_tag="ACFJCW_002072"
     CDS             complement(1089..1490)
                     /locus_tag="ACFJCW_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HFC4152114.1"
                     /translation="MFIPAALHKDEHSAYGVTIPDLPGCFSCGDTVEEAVANARSAAY
                     MHIDGMIEDGGFKNLAVSSIADLSQEPDYHGATWVMIEIDPAKISRQQIRFNVSWPQY
                     LLDRVDEYTSANHETRSGFLAKAALLTMNQA"
     gene            complement(1592..1774)
                     /locus_tag="ACFJCW_002073"
     CDS             complement(1592..1774)
                     /locus_tag="ACFJCW_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HFC4152115.1"
                     /translation="MNSLDVIALLKQDGWYKVAQSGSHSQYKHPTKKGRVTVPHPKKD
                     LPTGTVKNIYKQAGLK"
     gene            complement(1944..2762)
                     /locus_tag="ACFJCW_002074"
     CDS             complement(1944..2762)
                     /locus_tag="ACFJCW_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HFC4152116.1"
                     /translation="MNQYAMRFAVIRFMPYVQTREFANIGIIITHPKSGYFDFKIEQR
                     YSRLSRFFRRFDSSVYKAATRAFAEELQRIGKLAAYSAPDQIRAMLDHLTRPREALIM
                     AAQPGVTLAPDRGQELNRLFDYFVAHSFAKSQPEAELTRQIQAMLKPLQTAYPFKEST
                     IGDPSGFHASIPLVQKAENGEIRKIIKPIYFGQKDPADIYYKSDKWIAGIKRLRRGGY
                     IDRSEILFAYEPPERPDKAQEKALLDVLGDLEEQGIRLADNRSEGKIIRNFACG"
     gene            complement(2759..3478)
                     /locus_tag="ACFJCW_002075"
     CDS             complement(2759..3478)
                     /locus_tag="ACFJCW_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HipA family kinase"
                     /protein_id="HFC4152117.1"
                     /translation="MLQIQTIMDRAEQGVTSPFICMAENGLEYFVKGLHATRASQINE
                     WIGGNMAQALGLPVAPFELLEVGEELYEELPAKMKEIGKGICFGSLAQKGCALLEPAD
                     IPRIDTVMQRQIAAFDWFVRNEDRTIGNPNLLYRNCNNSLIVIDHNCAFDTGFNPNNF
                     LQNHIFSSAFRQILEDWVLREEMELWLKSALPAYRKACDNLPPEWAWANEERDLPAAY
                     NRSRTDETVRRIDNGTLWSIS"
BASE COUNT          880 a          839 c          967 g         1017 t
ORIGIN      
        1 tgctgattaa ttcgttcatc ccgtttcctt caagttgttg tttgtttcga tgggtgtatt
       61 taaacatagt gtttaataat atgcaacaat ttgtttaaga tttttgttta atatttataa
      121 acattttgat tattaaaaga atttattttt gagattccgc aggcgcaaaa aaaccgcccg
      181 atatttcggg cggcgtatta aaatcagatg aaattaagga ggcttattat ggaaatgcaa
      241 ttggacaaac agacattgac agtggttgtc agaaacagcg agccggtgga attgtcggta
      301 tttgcgcagt ctatgatgag ccttgccgat gattacgaat ccatgtgcgg cagcgcgggc
      361 agtcatgcgc ggctgtatat taaggaaatc aggcagggca gcattattgc cgagcttgcg
      421 cccctcttgc ctttggcggg tacgcttttt gaaggcgcgg ggcagatatt ggcgtacgcc
      481 aagaatttta ttgagattac cgattggctg atgggtaaag gcaaagaacc cgcaggggta
      541 acggacagcc aaatccgcaa tattgcaaat atcatgcagc ctgccgcatc ggataaaaac
      601 gggtcgattg aaatcaacgt gaacgacaac aacggctccg tcgtcaataa tattacctac
      661 aactatttcg cggcaaacac ggtacaaaat caggcaaggc ggatactggg cgaacgggcg
      721 gaagcgtccg aatcagggga ttacgggcag atggtgatgt atttcgtaca agccgcgccg
      781 acaaaggaaa ccaatcaggc ggttattgaa gggatataca gccgtccggt caaaatcctg
      841 attcccgaac acatcaagcg cgaaatgttt gcagagcctt atccatttga aaaatattat
      901 attgttgacg taagcgtaca gacggcgcgc ggcaagccca ggctctacaa agttaccggg
      961 tatcacgggg tagtcgatgg ggacgattga aaaccgcctt ttcgggcggc tttgtcggtt
     1021 ttgtgttgtt ttcaggttcg gcggggcgtg aaaaaagccc gcgtgtgcgg gcgggttgaa
     1081 cgggctggct atgcctgatt catggtaagc agggcggctt tggctaaaaa accgctacgg
     1141 gtttcatgat ttgcggatgt atattcatcc actctatcaa gaaggtattg cggccagctg
     1201 acgttgaatc ggatttgctg ccgactgatt tttgcagggt cgatttcaat cattacccat
     1261 gttgccccat gataatcagg ttcttggctc aaatcggcaa tgctgcttac ggcaaggttt
     1321 ttgaaccctc cgtcctcaat cataccgtca atatgcatat aggcggcaga acgggcgttg
     1381 gcgacggctt cttcaacggt gtcgccgcaa gagaaacagc cgggaaggtc ggggatggtt
     1441 acgccatatg ccgaatgttc gtctttgtgc agggcggcag ggataaacat ttgatttcct
     1501 ttaattatgt tgttcaggtt tatgggcgcg tgagataacc cgttgattgt ttgattagaa
     1561 ggggggcagc gggaaacccc gctgcctgcc gttacttcaa accggcttgc ttatagatat
     1621 tttttacagt acctgtcggc aagtcttttt tcgggtgcgg cacggttaca cggccttttt
     1681 ttgttgggtg cttatattgc gaatggctcc cggattgtgc aactttatac caaccgtctt
     1741 gtttgagtag ggcaataacg tctaggctat tcaattatca ctcctaatct taatgcatgg
     1801 cacgcctgcc aatgtgcgta ataatacaca ctaattttta ttttgtcaat ttttatgtgt
     1861 atttgtgtgt aaaaatatct ttcggcagta gttgcaggga agggtgtaaa aagcccgcat
     1921 aacgcgggcg gtcttgaggg ctgtcagccg caggcaaagt ttctgatgat tttgccttcg
     1981 cttcggttat cggcaagccg tatgccctgt tcctccaggt cgcccaatac gtcaagcaat
     2041 gccttttctt gtgccttgtc gggacgctcc ggcggttcgt aggcaaacaa tatttcagag
     2101 cggtcgatgt atccgccgcg ccgcaaccgt tttatgccgg caatccactt atcagacttg
     2161 taatagatgt cggcagggtc tttctgtccg aaatagatag gcttgatgat tttccgtatt
     2221 tcgccgtttt ccgccttttg caccaagggg atggaggcgt gaaagcctga cgggtcgccg
     2281 attgtgcttt ctttgaaggg gtatgccgtc tgaagcggct ttaacattgc ctgtatttgt
     2341 cgggtaagtt ctgcttcggg ttggctttta gcaaagctgt gggcgacaaa ataatcaaac
     2401 aggcggttca gttcctgccc cctgtcgggg gcgagggtta cgcccggttg ggcggccata
     2461 atcagggctt cgcgcgggcg ggtcaaatgg tcgagcatgg cgcgtatctg atcgggcgcg
     2521 gagtatgccg ccaatttccc aatccgctgt aattcttctg caaaggcacg ggtcgccgct
     2581 ttatagacgg acgaatcgaa gcggcggaaa aaacggctca atctgctgta acgctgttcg
     2641 attttaaagt cgaagtagcc gcttttggga tgggttatga tgatgccgat gttggcaaat
     2701 tcgcgcgttt ggacataggg cataaaccgt atgacggcaa aacgcatggc atattggttc
     2761 atgagatgct ccaaagtgtt ccgttatcaa tgcggcggac ggtttcgtcg gtgcggctgc
     2821 ggttataggc ggcgggcagg tcgcgctctt cgtttgccca tgcccactcc ggcggcagat
     2881 tatcacacgc ttttctgtag gctggcaatg cgcttttcag ccataattcc atctcttccc
     2941 gaagcaccca atcttccaaa atctgtctaa atgccgatga gaaaatatga ttttgcagaa
     3001 agttatttgg attgaagccg gtgtcgaagg cgcagttatg atcaataaca atcaaggaat
     3061 tgttgcaatt tctatacaaa aggttagggt tgccgattgt tctgtcttca ttacggacaa
     3121 accaatcgaa agcggcgatt tgccgctgca tgactgtatc gattcgcggg atgtccgcag
     3181 gctccagtaa cgcacagcct ttttgcgcca gtgagccgaa acagatgcct ttgccgattt
     3241 ctttcatctt tgcgggcaat tcttcgtaca gctcttctcc gacttccaac agctcaaacg
     3301 gagcaacggg caagcccaaa gcctgcgcca tgtttccgcc tatccattcg tttatttggc
     3361 ttgcacgggt ggcgtgcagc cctttaacga aatattccag accattctcc gccatacaga
     3421 tgaacggcga ggtaacacct tgctccgcac gatccattat tgtctgtatc tgcaacattt
     3481 cttttcttta tcctatgttt caacacacag gacgacacat aaagcaccgc cctatgtgtt
     3541 gccctgattc ggaaggggtt acgcccctcc caaacagagt ctgatcctgc cgccctaaag
     3601 ggcggggttt caaccgaaaa ggaaatacga tgaaatttac actttgtgta aatctgtaaa
     3661 tccgactttt tgagatttcc ccctagagga atttgtcaat cca
//
LOCUS       DAXGCP010000136         3567 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.137, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000136 DAXGCP010000000
VERSION     DAXGCP010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.137"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1264
                     /locus_tag="ACFJCW_002076"
     CDS             <1..1264
                     /locus_tag="ACFJCW_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HFC4152118.1"
                     /translation="EIRFNTKNESLLVKEDYAGGARFRFAYDLKDKVPEIPVLTFEKN
                     ITGTSDIIFEGKALDNLKHLDGHQIVKVNDTADKDAFRLSSKYRKGIYTLSLQQRPEG
                     FFTKVQERDDIAIYAQQAQAANTLFALRLNDKNSDIFDRTLPRKGLWLRVIDGHSNQW
                     VQGKTAPVEGYRKGVQLGGEVFTWQNESNQLSIGLMGGQAEQRSTFRNPDTDNLTTGN
                     VKGFGAGVYATWHQLQDKQTGAYVDSWMQYQRFRHRINTEYATERFTSKGITASIEAG
                     YNALLAEHFTKKGNSLRVYLQPQAQLTYLGVNGKFSDSENAQVNLLGSRQLQSRVGVQ
                     AKAQFAFTNGVTFQPFVAVNSIYQQKPFGVEIDGDRRVINNKTVIETQLGVAAKIKSH
                     LTLQASFNRQTSKHHHAKQGALNLQWTF"
     gene            complement(1247..1552)
                     /locus_tag="ACFJCW_002077"
     CDS             complement(1247..1552)
                     /locus_tag="ACFJCW_002077"
                     /inference="COORDINATES: protein motif:HMM:NF014299.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152119.1"
                     /translation="MDPIVGLARARGRGELDRIEQMDLDFFHRTRARYLELVKDNPKA
                     VVINAEQTIELVQAEIESAVKIGGNYTKNDRTFKIIKSAVNFPADFILLQFNLKRPL"
     gene            complement(1593..2960)
                     /locus_tag="ACFJCW_002078"
     CDS             complement(1593..2960)
                     /locus_tag="ACFJCW_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HFC4152120.1"
                     /translation="MPDLHTEFSRLLPADEIAEPSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLVIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELIGRFAAKLSSEFSKLPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAVPIGRVADFVRQCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFPPEILSNEVYRYEN
                     DINSTVYRNVLARNGTIAAEHGIGIIKKQWLPAVRTPSEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(3070..3351)
                     /locus_tag="ACFJCW_002079"
     CDS             complement(3070..3351)
                     /locus_tag="ACFJCW_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152121.1"
                     /translation="MKKSLFAAALLSLALAACGGEKAAEAPAAEASSTEAPAAEAPAA
                     EAPAAEAPAAEAAATEAPAAEAAATEAPAAEAAATEAPAAEAPAAEAAK"
BASE COUNT          962 a          758 c          924 g          923 t
ORIGIN      
        1 tgaaattcgt ttcaacacta aaaatgaaag tttactcgta aaagaagatt atgctggcgg
       61 agctcgtttt cgttttgctt acgatctaaa agataaagtc cctgaaatac cagttttaac
      121 ttttgaaaaa aatataactg gcacatcaga tattattttt gagggaaaag cgttggataa
      181 tttgaaacac ctagacgggc atcaaattgt caaagtaaat gacaccgcag ataaagatgc
      241 ctttagactt tccagtaaat accgaaaggg aatttatacg ctctctttac aacaacgccc
      301 agagggcttt tttaccaaag tgcaagaacg cgatgatatt gcgatttatg cacaacaggc
      361 tcaagccgcc aataccttat tcgccttgcg tttgaacgac aaaaacagtg atattttcga
      421 ccgcacttta ccacgcaaag gcttgtggtt gcgtgtgatt gacggacatt ccaaccaatg
      481 ggtgcaaggc aaaacagcac ctgtagaagg ctatcgaaaa ggtgtgcaac tcggcggcga
      541 ggtgttcaca tggcaaaacg aaagtaatca actttctatt ggcttaatgg gcggacaagc
      601 agaacaacgc agcactttcc gcaatccgga tacagacaat cttacaacgg gaaatgtgaa
      661 aggctttggt gcgggcgttt acgccacttg gcatcagctt caggacaaac agacaggtgc
      721 gtatgttgat agctggatgc aatatcaacg tttccgccac cgcattaaca ctgaatatgc
      781 tacagaacgt tttacttcaa aaggtattac tgcctcaatt gaagcgggtt acaatgcgtt
      841 attggcggaa cacttcacta aaaagggcaa cagccttcgt gtttacctac aaccacaggc
      901 gcaattgact tatttggggg taaacggaaa attcagcgat agcgaaaatg cccaagtgaa
      961 tttgcttggc tcccgccaat tacaaagccg agtgggcgtt caagctaaag cgcaatttgc
     1021 tttcactaat ggcgtcactt tccaaccatt tgttgctgtc aattcaatct accaacaaaa
     1081 acctttcggt gtggaaatag acggggatcg tcgagtgata aacaataaga cggtaattga
     1141 aactcaatta ggtgtagcag cgaaaatcaa atctcactta accttgcaag cctcattcaa
     1201 ccgccaaaca agcaaacatc atcacgctaa acaaggtgcg ttgaatttac agtggacgtt
     1261 ttaagttaaa ttgtaacaaa ataaaatcgg cagggaaatt cactgccgat tttattattt
     1321 taaaagtgcg gtcatttttc gtgtaatttc caccaatttt taccgcactt tcaatttcag
     1381 cttgaacaag ttcaatagtc tgctctgcat taattacgac tgcttttgga ttatctttta
     1441 ctaattctaa atagcgtgct cgagtgcgat ggaaaaaatc taaatccatt tgctcaatac
     1501 ggtctaactc gccacgtcca cgagctcgcg ctaaaccgac aatcggatct attgtccttt
     1561 tctttgttgt gtatgcaaat cagaaatgcc ggttacggaa gcagtttgcc aggattcata
     1621 atgttatatg gatcaaggtg ttgtttgatg cttttcatca gggcaatttc agagggcgtg
     1681 cggacagcgg gcagccattg ttttttgatg atacctatgc cgtgttcggc ggcaatcgtg
     1741 ccgttgcggg caaggacgtt gcgatagact gtgctgttga tgtcgttttc gtaacggtaa
     1801 acttcattgc tgaggatttc gggcgggaaa gtattgtagt gcaggctgcc gtcgcccaga
     1861 tgtccgaagc agacgatttg tatgcctttg aaattctgtt ccaaatcttt ggcgcactgg
     1921 cggacaaagt cggcaacgcg cccgatagga acggcaatat cgtgtttgat gctggtgccc
     1981 agtttgcgtt gggaggcgga gatgttttcg cgcaacgccc acatatggat acgttcttgt
     2041 tcgctttgcg ccaatacgct gtcggtaaat ccttttttat aaagaaattc gacaagccga
     2101 tcatcaagat tgctgtcggg taatgagtcg gtcaactcaa gtaaaatatg ccattctgaa
     2161 tgtgtcggca gggggagttt gctgaattcg gaagacaact tggcggcaaa acggccgatc
     2221 agttcaaaac tgcataagcg ttcggcaaag tgcgcttggg tttcggtcag caggcggacg
     2281 gcggattcga tgtcgggaat gccgacccat gccgttgcct tgtccgaggg acgggcaaaa
     2341 agcttgagcg tggcggcagt gatgatgccc agtgtgcctt cgctgccgat aaacagatgg
     2401 cgcaggtcgt agccggtggt gtttttatgc aggggatgga gatgggaaac cagttcgccg
     2461 ttggggagga cgacttccaa accgataacc aggtcgcgca tcgtgccgta acgcaatacg
     2521 ttcaaacctc cggcattgca ggcgatgttg ccgccgattt ggcacgagcc ttcgctggcg
     2581 agactgagtg ggaacagcct gtttgaggct tcggctgcct gttggacggt ttggagtacg
     2641 gaacctgctt cgacggttat gcagttgtct gacaaattga tgctgcggat gcggttgagt
     2701 ttggaaaggt tcagcaatac gccgttttcc gatactgccg cgccgcacaa accggtattg
     2761 ccgccttgcg gcgtaaccgg aatgcggtgt tcgtaacaaa aacgcataat ggtttgcacg
     2821 ctttcaacgc tgcgcggctg caaaatgatg tctggtgcag acgtaaagcg gttgcgctga
     2881 tcttttaaaa gcgtcggaga aggttcggca atttcatctg ccggcaggag tcgggaaaat
     2941 tcggtatgaa ggtcaggcat gtttgtcgga agggtaggga gaagattgag gaagggaatc
     3001 tgatgccgtc tgaaaaatca aaaaagcagg atactgaacg tatcctgctt ttttgcaagc
     3061 ggaaaatgct tattttgcag cttcggcagc aggagcttca gcggcaggtg cttcggtagc
     3121 agcagcttcg gcggcaggtg cttcggtagc agcagcttcg gcggcaggtg cttcggtagc
     3181 agcagcttcg gcggcaggtg cttcggcggc aggtgcttcg gcagcgggag cttcggcagc
     3241 aggtgcctcg gtagaggaag cctcagcagc aggagcttca gcggcttttt ctccgccgca
     3301 ggcagccaaa gccaaagaca acaaagcagc ggcaaacagg gattttttca ttttagtaac
     3361 ctttaaaatc aatttaaatt attgaaacaa ataggtcttt ttcgaccatg ctacaaaccg
     3421 ggttggaaat tcatcgctga atttgcgtaa ttatgcacca tggaataagg gattgcaatg
     3481 tcgtacagat gggaaaaagg tttgaatgaa aagttttctg gcgggcggat tgataaatcc
     3541 tgtaaaacgg ttttgctgtt aaaaatc
//
LOCUS       DAXGCP010000137         3443 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.138, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000137 DAXGCP010000000
VERSION     DAXGCP010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3443)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3443)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3443
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.138"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..2112
                     /locus_tag="ACFJCW_002080"
     CDS             <1..2112
                     /locus_tag="ACFJCW_002080"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HFC4152122.1"
                     /translation="EARTLLFHTASYLKPEEQAELEKAVAYAFRAHDGQTRKSGDPYI
                     THPIAVATQLALWHMDIQGLCAGVMHDVLEDTGVTKGEMAAVFGNTVAEMVDGLSKLE
                     KLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTLGSMRPDKRRRIARET
                     LEIYAQIANRIGLNNAYRELQDLSFQNLHPNRYETLKKAMDKSRKNRQDVVGKVLRAF
                     GQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGFRVIVNSIPACYAALG
                     TLHTLYQPKPGRFKDYIAIPKSNGYQSLHTILVGPYGLPIEVQIRTREMDAVAEGGIV
                     GHWSYKSDSKTVDQAVLHTNQWLKNILDLQASSANAIEFLEHVKVDLFPNEIYILTPK
                     GKILTLPKGATPVDFAYAVHTDIGHKTVAARVNNVMMPLRTKLKTGDSVEIITSEHAK
                     PNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALSSLLPKDVLLSDGIKE
                     KYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFGSEVRLSSIKVDGQES
                     GHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPEQQLDADWENMNGQNY
                     RVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTEGFVEFKFLLKVKNLD
                     QLNQIIQNLHSIPYIRKVIRS"
     gene            complement(2179..3363)
                     /gene="coaBC"
                     /locus_tag="ACFJCW_002081"
     CDS             complement(2179..3363)
                     /gene="coaBC"
                     /locus_tag="ACFJCW_002081"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HFC4152123.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTNLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACRENGM
                     GRMPEPAELLDLLPDLWTPKILRDKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEISLIHGQLQTTLPFGISDTVQAVSAEDMHRAVHRLIEKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDTLASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKTTNQIVIIDDDAELSFPETSKDEAAMRIVERLAVYL
                     NK"
BASE COUNT          899 a          858 c          841 g          845 t
ORIGIN      
        1 gaagcgcgta ccctgctttt ccataccgcc tcctacctca agcccgagga acaggcggag
       61 cttgaaaaag ctgtcgccta tgcgtttcgc gcccacgacg ggcaaacccg caaaagcggg
      121 gatccctaca tcacgcatcc gattgccgtt gcgacgcagc tcgccctttg gcatatggac
      181 atacagggtc tttgtgcagg cgtgatgcac gacgtattgg aagatacggg cgtgacaaaa
      241 ggggaaatgg cggcggtgtt cggcaatact gttgccgaga tggtggacgg gctgtccaaa
      301 ctcgaaaaac tcaaatttga agatcatgcg gaacatcagg cggagagttt ccgcaaactg
      361 attttggcga tgaccaaaga tgtgcgcgtc atcgttgtca aacttgccga ccgcctgcac
      421 aatatgcgga cgctcggttc gatgcgcccg gacaaacgcc gccggattgc aagggaaacc
      481 cttgaaatct acgcacagat tgccaaccgc ataggtctga ataatgcgta tcgggagctt
      541 caggatttat cgttccaaaa cctgcatccc aaccgctacg agactttaaa aaaagcgatg
      601 gacaagagcc ggaagaacag gcaggacgtt gtcggcaaag ttttgcgcgc gttcggccag
      661 cggctggtag gcgcgaatat agaggccaaa atcaaaggca gggaaaaaaa cctgtacggc
      721 atccatcaga aaatgatggc gaaaaagctg cgttttgccg aggttatgga tatttacggt
      781 ttccgcgtca ttgtcaacag cattcccgcc tgttatgccg cactcggcac attgcacacc
      841 ctctatcagc ccaagcccgg acggttcaaa gactatatcg ccattccgaa aagcaacggt
      901 tatcaaagtc tgcatacgat tttggtcggc ccttacggct tgccgattga agttcagata
      961 cgcacgcggg aaatggatgc cgtggcggaa ggcggtattg tcggccattg gagctataaa
     1021 tcagattcca aaacggtcga tcaggcagtg ctgcacacca atcaatggtt gaaaaacatt
     1081 ttagacttgc aggcaagcag cgccaatgcc attgagtttc tcgaacacgt caaagtcgat
     1141 ttgtttccga acgaaatcta catccttact ccgaaaggaa aaatcctaac tttgcccaaa
     1201 ggggcaacgc ctgtcgattt tgcttatgcg gtgcataccg acattgggca taaaacagtt
     1261 gccgcgcgtg tcaataatgt gatgatgccg ctgcgtacga agctcaaaac cggtgattct
     1321 gttgaaatta tcacatccga acacgccaaa cccaatcccg cgtggttgaa tttcgccgtg
     1381 tccggcaggg cgcgcagtgc catacgccaa tatattaaaa atcttaaccg gcacgatgcg
     1441 gtcgttttgg gagagagcct cttacaaaaa gccttgtcca gtttgctgcc caaagatgtc
     1501 ctgctttcag acggcatcaa agaaaaatac cttgccgatc tcaacgacaa acagacttca
     1561 tttgaggaag tgctgtacaa cgtcggtatg gggcataccc tgcctgttta tgtcgccatg
     1621 catatcgccg aattggcagg ggagcatttc ggcagcgagg tcaggctcag ttccattaaa
     1681 gttgatggtc aggaaagcgg gcatattcat tttgcagagt gctgccaccc tgttcccggc
     1741 gattccatcc gtttgctgtt ggttaaggga aaaggcatga ttatccatag ggatacctgc
     1801 ccgacgttgt tgaagtccga tcccgaacag cagctggatg cagactggga aaatatgaac
     1861 gggcagaact accgtgtcgg gcttcaagtc caatcggaag acagccacgg cctgttggca
     1921 ttaatggcgc aagcgatttc cgattccggt gcggacatcg agtcggtcga aacaccgtct
     1981 aaatcccagt cgggaacgga aggttttgtc gaattcaaat tcttattgaa agtcaagaat
     2041 ttggatcagt tgaatcagat tattcaaaat ctgcacagca tcccatatat ccgcaaagtc
     2101 atcagaagtt gaagcaggta aaacgggttg cctgttaatc aaaaggcaac ccgttttatg
     2161 gtttatccgt tcaattgctt atttgttcaa atatacggca agcctttcaa caatccgcat
     2221 tgccgcttca tctttacttg tttcggggaa agacaactcc gcatcatcat ctatgataac
     2281 aatttggttg gttgtcttgc ccatcgcgat tgaaacatca ttggcaacta tcaccggtat
     2341 ttttttctta atacgttttt cccgcgcata tgccattaca ttctccgttt cagcggcaaa
     2401 accgatgcag aacggcgggt tcggcaatga ggcaatagaa gccaaagtat cggggttctc
     2461 atccaattcg atggataacg gtttggcatt tttatctttt ttgaattttt gcgtactcct
     2521 gtttttaacc ttatagtctg agacggcggc aacagaaata aaagcatctt gtttttcaat
     2581 caaacgatgt actgcgcgat gcatatcttc ggcactgacg gcttgaaccg tatcggatat
     2641 gccgaaaggc agcgtggttt gaagctgtcc gtgaatcagg ctgatttccg caccggcggc
     2701 acggcacgcc cgcgccaaag ctacgcccat ttttccgctg gaggtatttg tgatgcccct
     2761 gacagggtca atggcttcaa atgtcgcacc tgcggtaatc aagattttct tgtcccttaa
     2821 aattttcggt gtccacaagt ctggaagcaa atccagcaat tcggcaggtt ccggcatcct
     2881 tcccatacca ttttctctgc aagcctgttc gcccaagccc ggcatataga cagtaatgcc
     2941 gtctgaaacc agttgtgcga tattccgttg gttggcagga ttcagccaca tttccacatt
     3001 catcgcggga gcgatggcaa gagggcattt ccgtgcggct gccagattgg tcagtaggtt
     3061 atctgccacg ccgttacaga tttttgccac ggtattcata cttgccggcg caatcagaaa
     3121 aacatccgca ttccgggtca ggttgatatg ttccataccg tttgaaccgt tgccgccgtg
     3181 cgtgtcggtc agaacgggat tgccgctcaa agcctgaaaa gtcagcggag aaacaaattc
     3241 agttgccgag cggctcataa ccaccgtaac cgaatgcccc tgttttttca gcagtcgcac
     3301 caactcgcaa gacttatacg ccgcaatact gcccgttaca cctaaaagaa tatgtttgcc
     3361 cattttgaca atttctaatt acgaagaaaa aacagcagcc attctataac aaagtacgga
     3421 tacattagtt accgtttgga tac
//
LOCUS       DAXGCP010000138         3290 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.139, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000138 DAXGCP010000000
VERSION     DAXGCP010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3290)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3290)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3290
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.139"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            204..488
                     /locus_tag="ACFJCW_002082"
     CDS             204..488
                     /locus_tag="ACFJCW_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC4152124.1"
                     /translation="MKLLAALIPLLMNVAGRILTALGLMAVTYAGVDRLAAHFQQAIT
                     HSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            489..1677
                     /locus_tag="ACFJCW_002083"
                     /pseudo
     CDS             489..1677
                     /locus_tag="ACFJCW_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
     gene            1892..2836
                     /locus_tag="ACFJCW_002084"
     CDS             1892..2836
                     /locus_tag="ACFJCW_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISNgo3 family transposase"
                     /protein_id="HFC4152125.1"
                     /translation="MNIIGPDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKVYIGMEATGIYYEKAADMLSSYYTVYVINPLKINDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQQQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDNNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKMVIIVAIMRKLAKPAYYIVKTGQPYDAERH"
     gene            3139..>3290
                     /locus_tag="ACFJCW_002085"
     CDS             3139..>3290
                     /locus_tag="ACFJCW_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFC4152126.1"
                     /translation="MTELPWIAEARRHIGLKEIPGAKHNPTIVQWLKETGGFPGAAKS
                     WYFEDET"
BASE COUNT         1132 a          695 c          750 g          713 t
ORIGIN      
        1 taagcaactt tagccaaagg caggcgaagt accgcacttt gcgggcgaag ccgcaaacag
       61 ccgagaagcg cggggggggg attggcgata agcgcgaggg ggtgtcccca cagcgctgcc
      121 gcgccgcgaa tgcggagcaa tctttcagat taagaaacat ttgtttaatg aggcaaacgt
      181 gccttttaag aaagggagag caaatgaaat tgttggccgc attgattccg ctcttgatga
      241 acgtcgcagg ccgtatattg actgcattag gcttgatggc tgttacctat gcgggtgtag
      301 atagattggc agcccatttt caacaggcga taacccatag cataacgggc gcgcctcaag
      361 caatgttaca gcttttctat ataagcggcg gtggtactgt tctaaacatt cttttcggcg
      421 caatcgcctt tattctgtcc tttaaacaaa tgacaaaact cgcaacctca atcgggaaga
      481 aaaaataaat ggcagaaatc tgtttgataa ccggcacgcc cggttcaggg aaaacattaa
      541 aaatggtttc catgatggca aacgatgaaa tgtttaagcc agatgaaaac ggcgtacgcc
      601 gtaaagtatt tacgaacatc aaaggtttga agataccgca cacccacata gaaacagacg
      661 caaagaagct gccgaaatca accgatgaac agctttcggc gcatgatatg tatgaatgga
      721 tcaagaagcc tgaaaacgtc ggcgcaatcg ttattgtcga tgaggcgcaa gacgtatggc
      781 ccgcacgctc cgcaggttcg aaaatccccg aaaacgtcca atggctgaac acacacaggc
      841 atcagggcat agatatattt gtattgacac aaggtcctaa actcttagat cagaacttgc
      901 gaacattggt taaaagacat taccacattg cggccaacaa aatgggtttg cgtaccctgc
      961 ttgaatggaa agtatgcgcg gatgacccgg taaaaatggc atcaagtgca ttttccagta
     1021 tctacacact ggataaaaaa gtttatgact tgtacgaatc cgcagaaatt cacacggtaa
     1081 acaaagtcaa gcgttcaaaa tggttttatg cattgcccgt catcatatta ttgattccgc
     1141 tatttgtcgg tttgtcttac aaaatgttgg gcagttacgg aaaaaaacag gaagaacccg
     1201 cagcacaaga atcggcggca acagaacagc aggcagtact tccggataaa acagaaggag
     1261 aatcggtgaa taacggaaac cttacggcag atatgtttgt tccgacattg cccgaaaaac
     1321 ccgaaagcaa gccgatttat aacggtgtaa ggcaggtaag gacctttgaa tatatagcag
     1381 gctgtataga aggcggaaga accggatgca cctgctattc gcatcaaggg acggcattga
     1441 aagaagtgac ggagttgatg tgcaaggact atgtaaaaaa cggcttgccg tttaacccat
     1501 acaaagaaga aagccaaggg caggaagttc agcaaagcgc gcagcaacat tcggacaggg
     1561 cgcaagttgc caccttgggg cggaaaaccg cagcagaacc taatgtacga caattgggaa
     1621 gaacgaggga aaccgtttga aggaatcggc gggggcgtgg tcggatcggc aaactgaaga
     1681 aaacggcaac agagaaaaaa gacccgtaaa ccgtttgaat atagacggct tacgggtctt
     1741 tgtttcgcgc aaagcaaggg ctaaggcagt caggcagcaa atcccgcaat gtattaaaac
     1801 agacgcgtag aaatgccggc tgcctttatc catcctcaaa attgaatatc atcctagccg
     1861 tatcaaggct gtataaataa ggaaaatacc aatgaatata atcgggccgg acatctcaaa
     1921 ggacaccata gacgcaacat tgcataaaac aaacggaagt atccattaca ttaaatttaa
     1981 gaataatgat gatggattaa aacagtttag attgtggata aagggaaaca gaatcagaaa
     2041 agtctatatc ggcatggagg caacaggcat ctattacgaa aaggcagcag atatgctttc
     2101 ttcctactat accgtttacg ttatcaatcc cttaaaaatc aatgactacg gaaaaagcag
     2161 gtttaaccgt accaaaaccg acaaagcaga ttcaaacctg atagcagatt acataaaaag
     2221 gcatcaagat acattgatac cgtatcagat acccaaaaac aaagcactgc aaaaactgat
     2281 taatcttaaa aaccaattac agcaacagca gaagcaaatt aaaaaccgtc ttcatagcac
     2341 tgaagaagac ttcataagga acatacatca agacttgata gataccatac aggacaagat
     2401 ggaacaggta aaaatagcca tatccgaaca aatcaaaaaa caaacggaca ataaccatta
     2461 ccgcaatctt caaaccatcc cgagcatagg caaagacacc gcatcagttc tttatgcgca
     2521 actgacagaa aaacatttta aaaccgcaaa ccaatttgta tcctatgccg gattaagtcc
     2581 cgccatcata caatcaggga caagcgtaag aggtcggggc agattgagcc gatacggaaa
     2641 cagacgatta aaaagtacgc tgtatatgcc cgccctttgt gcttaccgtt ttaacgcatt
     2701 tccgaaatta ataaataatc tgaaaaaagc gggtaagcca aagatggtaa ttatcgttgc
     2761 catcatgcgc aaactggcga agcccgccta ttacattgtt aaaaccgggc agccttacga
     2821 tgcggaaaga cactgattga atcaataaaa ttcaataaaa ttaaacggtt gcgcgaatat
     2881 atttgtgtaa ccgtgcattt gcatatcgta aataaacgta aataaaaata acaatataaa
     2941 tcagcatgtt gcaactttgt tttttatttt gtgttgacgg gcaacatatc atctgcgcgg
     3001 aaagttaccg tatcggcaaa cgcgactgaa aaagacagcg tgttcggcga tgcggtgcac
     3061 attgtgattg cgacttaaaa catagaacga gttgccaacc caaagtttac atctcgtctt
     3121 ttaccgaaag gattaaaaat gacagaatta ccgtggatag ccgaagcgag aaggcacatc
     3181 ggtttgaaag aaattcccgg cgcgaaacac aatccgacga ttgtgcaatg gctcaaagag
     3241 acgggcggct tccccggcgc ggcaaagtct tggtactttg aagacgaaac
//
LOCUS       DAXGCP010000139         3211 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.140, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000139 DAXGCP010000000
VERSION     DAXGCP010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.140"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1159
                     /locus_tag="ACFJCW_002086"
     CDS             <1..1159
                     /locus_tag="ACFJCW_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HFC4152127.1"
                     /translation="KGNLLGVPLRRGVSDSAFIDQITFSIHEDTFFHVYGLSFDLFDD
                     DDFIRAASAKMEEIFGFGIIEKAKHSGGRFYEGCWLMGTENAQYGRVHYGGQRETMLV
                     ELTAVGCNAANIGWESRLFDFLTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGLF
                     TCHHVKPKGECLGSDWEEDDEAKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWT
                     RFEIEFKAKDIVIPFEVLQNPGEYFGGAYPICERFAQKATRIHAVKEDKVVSADRCLE
                     WVKKQFGRAANGLKFIFPELDKAKLFELIEPSHHKLPKSLALEAYDCAFLKSQVIHEQ
                     PAFKPYNDPYYMYEYYENLEKQLEQQKHVNNEESYNNFIYDKFARLPISWA"
     gene            1204..1494
                     /locus_tag="ACFJCW_002087"
     CDS             1204..1494
                     /locus_tag="ACFJCW_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152128.1"
                     /translation="MNIQLQGHIVGVKKFNGQIEGKSFDYCRLIVATPLDSSQGNALG
                     SSTTEYDFGGSANFEQFRNAQFPIEANLNVEIVTTGKTQKLKVTGFQFVKKG"
     gene            1499..1696
                     /locus_tag="ACFJCW_002088"
     CDS             1499..1696
                     /locus_tag="ACFJCW_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152129.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAV
                     NAGLEEIGNQCEFVVFGFLKD"
     gene            1770..1989
                     /locus_tag="ACFJCW_002089"
                     /pseudo
     CDS             1770..1989
                     /locus_tag="ACFJCW_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236731.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
     gene            1996..2274
                     /locus_tag="ACFJCW_002090"
     CDS             1996..2274
                     /locus_tag="ACFJCW_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152130.1"
                     /translation="MYCQVGNKCLEKHRAENLYFSLVVPRIKENGQIIRPEYNGSMWK
                     MSDGQPLRLSLAECSPKDNLQSGLETGRIVFGVLASVYFVSLLKKVLK"
     gene            2402..2719
                     /locus_tag="ACFJCW_002091"
     CDS             2402..2719
                     /locus_tag="ACFJCW_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HFC4152131.1"
                     /translation="MNKPFITQAQLALYKYQPSSEYFGQSMAFIAQKEFEEFVNNVKE
                     YDILESFSYFLNKRVAHNIWKIYFSDESVIFIRKSEENGKTVHEFVYQEYTDSSDFNS
                     MFE"
     gene            2661..>3211
                     /locus_tag="ACFJCW_002092"
     CDS             2661..>3211
                     /locus_tag="ACFJCW_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC4152132.1"
                     /translation="MNSFIKSTPIVLILILCSSNSYSEPVRLEKSQIKFQSSNNLKSI
                     GFKLDSSSNSFSKFTEAANFEHIPTGAKARINAKITASVSRAGVLSGVGKLVRQGAKF
                     GTRAVPYVGTALLAHDVYQTFKEDIQARGCRYDPETDKFVKGYEYANCLWYEDERRIN
                     RTYGCYGVDSSIMRLMPDRSRFP"
BASE COUNT          963 a          698 c          738 g          812 t
ORIGIN      
        1 taaaggaaac ctgttaggcg ttcctcttcg gcgcggtgta tcagattcgg ctttcattga
       61 ccaaatcaca ttttcaattc atgaagacac gtttttccat gtttatggac tttcgtttga
      121 tttgttcgat gatgacgatt tcatacgcgc ggcttccgcc aagatggagg aaattttcgg
      181 attcggaatc attgaaaaag ccaagcattc gggcgggcgt ttctatgaag gctgctggct
      241 gatgggaacg gaaaatgccc aatacgggcg cgtccattac ggcggccaac gtgaaacgat
      301 gttggttgaa ttgacggcgg taggctgcaa tgctgcaaat attggatggg aatcaaggct
      361 ttttgatttt ctgacaaatg cgattcgtcc aaaaataacg cgcgttgaca ttgcaaaaga
      421 ctttttcaac ggagagtaca gcccgaatca ggcaagagaa gaccgcaata aaggtttgtt
      481 tacgtgccat cacgtcaaac cgaagggcga atgtttgggg tcggattggg aagaagacga
      541 tgaagccaaa atgaccaaag gcaagaccta tggtatcggc tcccgtgaat cgtccaaata
      601 tgtccgcgtc tatgaaaaag gcaagcagtt gggcgataaa acaagcacat ggacgcgctt
      661 tgaaattgaa ttcaaagcaa aagacatcgt tatccctttc gaagttttgc agaatccggg
      721 cgaatatttc ggcggcgcat atcccatttg cgaacgattc gcccaaaagg caacgcgcat
      781 acacgcggtt aaggaagata aggttgtttc agccgaccgc tgccttgaat gggtaaaaaa
      841 acagttcgga cgtgcggcaa acggtctgaa attcattttt cccgaattgg acaaagccaa
      901 actgtttgaa ctgattgagc cgagtcatca caagctgccc aagtctttgg ctctcgaagc
      961 ctacgactgc gcctttttga aatctcaagt cattcatgaa cagcccgcat tcaaaccgta
     1021 caatgaccct tattatatgt acgaatatta cgagaatctt gaaaaacagc ttgaacagca
     1081 aaaacacgtc aacaatgaag aaagctataa caacttcatt tacgacaaat tcgcaagact
     1141 accgatttca tgggcttaaa gtgtctgccc gaaagacgtt taatcacaca aggaaaccaa
     1201 aaaatgaaca tccaacttca aggccacatc gtcggcgtta aaaaattcaa cggacaaatc
     1261 gaaggcaaga gcttcgacta ttgccgcctg attgtcgcca cacccttaga cagctcccaa
     1321 ggcaacgcat tgggcagctc tactactgaa tacgatttcg gcggctctgc caatttcgag
     1381 cagttccgaa acgcccaatt tccgatcgaa gcaaacctga acgtggaaat cgtcactacg
     1441 ggcaaaactc aaaaactgaa agtcaccggt tttcaattcg ttaagaaagg ctgattgaat
     1501 gcagaaagtc tatgttgtcc agtccgtatc aacaggggac tttctgtatc tctctcctga
     1561 aacgggcgac atcggacata ccaaattaat taccaatgcc gattatttct acgacttcga
     1621 agaagcggtt aacgcaggtt tggaagaaat cggcaaccaa tgcgaatttg tcgtattcgg
     1681 atttttgaaa gactgatttt cggatgttcg gcggtcgtct gaaaaactct ccatccatta
     1741 ccgccaaaca ctttttgaag gaaaatatca tgaaatttat taacacctgc cgtaaatacg
     1801 gcgcaaaact ggctgttgta acagccgccc ccgctggctt tggcggcaca ggcaaacgca
     1861 gcgttgcccg aaacggcaaa aaacgctttg gaagccgcaa aagcggacgg tatggaagcc
     1921 ggttggattg tagtgggcgt tttcgccgcg ctttttgtat tttccatcgt taagagggtg
     1981 atgaagtaag gcggcatgta ctgccaagtc ggaaataaat gtcttgagaa gcaccgggcc
     2041 gaaaaccttt atttcagctt ggtagtacca agaatcaaag aaaacggaca gataatcagg
     2101 ccggaatata acggcagcat gtggaagatg tcggacggtc agccgctaag gctttcattg
     2161 gcggaatgca gtccgaaaga caacctgcaa agcggtcttg aaacaggccg gatagtattc
     2221 ggcgtcctcg cgtccgttta ctttgtttcc ctgctgaaaa aggttttgaa atgatggatt
     2281 tttatttcta tctcggcgtt gccgtccccg tattaatcgg ggcggttctg tttaaggatt
     2341 gagcgcatga agttatggtg tcaaaatcag gctttcaaaa caacctttga aaggcagaac
     2401 catgaacaag ccgtttatca ctcaggcgca gttggcactt tataaatatc agccgtcaag
     2461 cgagtatttt gggcaatcga tggcttttat tgctcagaaa gaatttgaag aatttgttaa
     2521 taacgtaaaa gagtacgata ttttagagag cttctcttat ttcttaaata agagggtcgc
     2581 acataatatt tggaagattt atttttctga tgagtctgtt atttttataa gaaaatcaga
     2641 agagaacgga aaaactgttc atgaattcgt ttatcaagag tacaccgata gttctgattt
     2701 taattctatg ttcgagtaat tcttattctg aacctgtaag attagaaaaa tcacaaatta
     2761 aatttcaatc aagtaataat ttaaaatcaa ttggttttaa attagattca agttctaaca
     2821 gtttttccaa attcacagaa gcggcaaatt tcgagcacat ccccacgggc gcaaaagccc
     2881 gaatcaacgc caaaataacc gccagcgtat cccgcgccgg cgtattgtcg ggggtcggca
     2941 aacttgtccg ccaaggcgcg aaattcggca caagggcggt tccctatgtc ggaacagccc
     3001 ttttagccca cgacgtatac caaactttca aagaagacat acaggcacga ggctgccgat
     3061 acgatcccga aaccgacaaa tttgtaaaag gctacgaata tgctaattgc ctttggtacg
     3121 aagacgaaag acgtattaat agaacctatg gctgctacgg cgttgacagt tcgattatgc
     3181 gccttatgcc cgatcgcagc agattccccg a
//
LOCUS       DAXGCP010000140         3194 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.141, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000140 DAXGCP010000000
VERSION     DAXGCP010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3194)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3194)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3194
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.141"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..287
                     /locus_tag="ACFJCW_002093"
     CDS             <1..287
                     /locus_tag="ACFJCW_002093"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152133.1"
                     /translation="SVLPTMADASNVSLDISNPTALRMGLPLYIQNLCSLILLNFTNK
                     KTARLFSSSNFKFVVCSGRTVSAKGSYSFAVSDFIWVAGFGKDSCCDPNV"
     gene            complement(600..959)
                     /locus_tag="ACFJCW_002094"
     CDS             complement(600..959)
                     /locus_tag="ACFJCW_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152134.1"
                     /translation="MIHKPRYIKIVDENGDFTRVLRLHKFPDTSKVFYFEPMFWLKDG
                     RVARKDSLFEVDYIYGADGCGFLPSNLTEFRKYCRKKHQKFKDDEVLVNRYAVDFLGA
                     KEPPYDDRHVTSVKYFV"
     gene            complement(1080..2152)
                     /locus_tag="ACFJCW_002095"
                     /pseudo
     CDS             complement(1080..2152)
                     /locus_tag="ACFJCW_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701501.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
     gene            complement(2162..2452)
                     /locus_tag="ACFJCW_002096"
     CDS             complement(2162..2452)
                     /locus_tag="ACFJCW_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HFC4152135.1"
                     /translation="MPLLAGLIPLLGILLKMLIVRIILATGLTFVTYAGYLAALEKFK
                     GYTANAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG"
     gene            complement(2431..>3194)
                     /locus_tag="ACFJCW_002097"
     CDS             complement(2431..>3194)
                     /locus_tag="ACFJCW_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HFC4152136.1"
                     /translation="DKYIEATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVAATFG
                     RDAQGNTTADVQVIPRPDLTPASAEAPHAQPPPEVSPAENPANNPDPDENPGTRPNPE
                     PDPDLNPDANPDTDGQPGTSPDSPAVPDRPNGRHRKERKEGEDGGLSCDYFPEILACQ
                     EMGKPSDRMFHDISIPQVTDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYRASYEPLCV
                     FAEKIRFAVLLAFIIMSAFVVFGSLGGNKCHYLPA"
BASE COUNT          720 a          781 c          762 g          931 t
ORIGIN      
        1 gctccgtttt gccgaccatg gcggatgcgt caaatgtcag cttggatata tccaatccta
       61 cggcgttacg catgggatta cccttatata ttcagaatct gtgttctttg atactactca
      121 atttcacaaa caagaaaacc gcccgcctat tctcgtcatc aaactttaag tttgtggttt
      181 gttcaggccg gacggtttcg gcaaagggta gctattcctt tgccgtgtct gattttattt
      241 gggttgcagg ttttggtaaa gattcctgtt gcgacccgaa tgtctgattt tttttgggcg
      301 tatctcagtc cggaatcact ccgttagtgg gtttgcggta ttgaaaaaca gttcataaaa
      361 aaggaaaagg ggggtattcg taaagattgg gtaacgcacc caatctttac aaagcttccc
      421 ccttttcctt ttttccgccc tattttcctg cacctacaac ccccgaacga agcgattccg
      481 gactgagaca ctttaaaaaa aacagccatt ctagcagtta acccccttcg ctccgcccaa
      541 gccatcctga ggtgtagtgg ctgaatttgt gattttggtt ttatcagatt ttggttttat
      601 caaacaaaat atttgactga agtcacatgg cggtcgtcat atgggggttc cttcgcaccc
      661 aaaaaatcga ccgcgtaacg gtttactaaa acttcatcgt ccttaaactt ttggtgcttt
      721 ttccggcaat attttctgaa ctccgttaaa tttgacggca agaacccgca accgtctgca
      781 ccgtaaatgt aatcaacttc aaacaaactg tctttccggg caacccgacc atctttaagc
      841 cagaacatag gctcgaaata aaaaactttc gacgtgtccg ggaacttatg gagacggaga
      901 acacgtgtga aatccccgtt ttcatctaca attttgatat atcttggttt gtgaatcatg
      961 acatcctcag atttagtatt cagaatatga ttttaaaaag aactttctgc tttacgactc
     1021 cgccgccgat tccttcaaac ggttttccgc gctcttcagt tgtcgtacat taaattttat
     1081 taggactttc cgcccattac gagaacttgg ggcttgtccg ctttcgcgga ctgtgccgcc
     1141 tgttccgtcc tttgccgttc gtccttgtaa ggattgaaag gcaacccgtt tttcacatat
     1201 tctttacaca ttatctttgt tatttctttc aagggtgttc cttgatttga atagcatgtg
     1261 caatctgatt ttccgccgtc tatgcatccg gcgatttgct caaaggtttt tacttgtcgg
     1321 actgtgttat aaataggctt gctttcgggc ttttcgggca aagtcggcac aaagtcttca
     1381 ggtttcagat tgtcggaatg ctcaaaaggc gctgtttctg atgatgccgt ctgctccgtc
     1441 atcgtctgca caacgctttc tttttgcgct tcctgctcaa tccggctgtc tgtggctttg
     1501 ctgtaaactt gaaacatgcc gtaacttttc cagcctacaa accctacaac cgcaatcaac
     1561 gcccaaaccg cccaaggcac ttttttcttg aacttttggt gccggcttga tgatttatag
     1621 tatttgaagg cttctttagg cggtttccaa tttgcggctt ctacgccgct tacgcccgcg
     1681 ggattgtcca acgaggttac gcatttatac caataatact gtttcatgcc gattgccttg
     1741 cgttcaaggt gtacatgctt tgaaacaagg ttgcggacga atatatcaag ttggctcggg
     1801 tgccgcgtca tcaaaatgac ggtatgcccg tgatggcgga gttctgtcag ttcctgaata
     1861 tagggcggaa cgggacggcc tgccgcgcgt accgggtaag tgtagtgcgc ttcgccaaca
     1921 atcagcaccg cgccttccgg tatgacatca cgaagcgggg cggacatgat ttgcccttcc
     1981 gccagttcgc gggcattgaa ttttcgtttg tccaatccgt cgatatggca gaaataaagc
     2041 ggccggtctg cctccgtgcc gtcttccaat tccattttga acaatccgtc ttcgttgttc
     2101 aaaatcatag ggttttgcct gcccccatgt ttcccgtaaa cagataaatc atgcttctac
     2161 ctcatcccgg aaagacaaac gtcagttttt tgaatgcgtg cataccaatg aagaacgaga
     2221 atgcgccgaa caggtagccc aacccctgac cgaatcccga aattaaaaga aggttcaata
     2281 tgtcggaagg catggaattg atcgcatttg ccgtgtagcc tttgaacttt tccagtgcgg
     2341 cgagataccc ggcataggtt acgaatgtca gacctgttgc aaggatgatt ctgacaatca
     2401 gcattttcag aagtatgcct aaaagtggaa tcaggccggc aagtaatggc atttattccc
     2461 ccccaacgaa ccgaaaacga caaaagccga cataatgata aaggcgagca gtacggcaaa
     2521 acggattttt tcggcaaaca cgcacaacgg ttcatagctt gcccgatatt gcctgccgaa
     2581 aacatgaaag gttttcggct gcggacatac gccgttagac ggtaaaaagt tatgtgaaga
     2641 ccatgtttta tcgtctgtaa cctgcggtat gcttatatcg tgaaacatgc ggtccgaagg
     2701 tttgcccatc tcctgacagg ctaggatttc cggaaaataa tcgcacgaaa gcccgccgtc
     2761 ttcgccttct ttcctttctt tgcgatgcct gccgtttggg cggtccggaa cggccgggga
     2821 atcggggctt gttccgggct gtccgtccgt atcgggattt gcatcgggat tcaaatcggg
     2881 gtcgggttcg ggattggggc gcgtgccggg gttctcatcg gggtccgggt tgtttgcggg
     2941 gttttcggcg ggcgatactt cgggcggcgg ctgtgcgtga ggtgcttccg cgcttgcggg
     3001 cgtgaggtcg ggacgcggga ttacttgtac atccgccgtg gtgttgcctt gcgcgtccct
     3061 gccgaatgtt gcggcaacct gaacgggatt cccgttcctg tccgtgacgg gccccatatt
     3121 cacttttgtt ccgggtgcga cttctacttt ttcggaataa ccgggatatc cggttgcctc
     3181 tatgtatttg tcgg
//
LOCUS       DAXGCP010000141         3089 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.142, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000141 DAXGCP010000000
VERSION     DAXGCP010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3089
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.142"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            142..318
                     /locus_tag="ACFJCW_002098"
     CDS             142..318
                     /locus_tag="ACFJCW_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152137.1"
                     /translation="MNPTKQSKKSYESKRVLKHVSFNTEKEANLLEFSNNLDFSKWVK
                     EKLKHELELEKLKK"
     gene            817..1659
                     /locus_tag="ACFJCW_002099"
     CDS             817..1659
                     /locus_tag="ACFJCW_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bro-N domain-containing protein"
                     /protein_id="HFC4152138.1"
                     /translation="MQNTISVFSFKSQNVRTQILGAEPWFCLGDVAEILQIQNARQLP
                     LKDQGIQKSSVATKKGNQELLFINEPNLYRVIFRSRKAEAVKFQDWIFEEVIPQIRKT
                     GGYQITPKTTADDRTGLRRAVAALVGRKRIGYSSAYSMIHQRFNVEAVEGIPADKLPE
                     AVAYVHALTLHTGLAGEVPDREPLPAPQPALPISGNALADIAAMVYYGTRMIELGKDV
                     SAPLKQLGCKQAVTMWTVWHETRSILKRSVAALEVLRGYADKDASGRIAACLEGIYGK
                     AAAR"
     gene            complement(1860..2240)
                     /locus_tag="ACFJCW_002100"
     CDS             complement(1860..2240)
                     /locus_tag="ACFJCW_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC4152139.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKPV
                     TVVPLSSTEPVPLADCHHKMSENPLPDKPHIQCRAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAVKTAVAKAFKLY"
     gene            complement(2573..2746)
                     /locus_tag="ACFJCW_002101"
     CDS             complement(2573..2746)
                     /locus_tag="ACFJCW_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152140.1"
                     /translation="MTTAVKPPADLVRPCPKLPHLEGNTGADVLPWSLQVIGLYKDCK
                     ARHGALVRALGAD"
     gene            complement(2730..3074)
                     /locus_tag="ACFJCW_002102"
     CDS             complement(2730..3074)
                     /locus_tag="ACFJCW_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152141.1"
                     /translation="MIGALLKNWKPLLILSAIAFFAVSWQLDRAAQYRRGYGAAVSEV
                     SERLKAAAVEHAEHARKSSAAYQAQKAAREEKERVRYVQTLKIIEKPVYRNACFDADG
                     VRELNAAVDDGG"
BASE COUNT          779 a          830 c          745 g          735 t
ORIGIN      
        1 aatgggttaa agaacaaatc cgaaaagagt tcttaaaata gcccgaccgc cgccaagccg
       61 caaacttggc ggtttttttg ttgccctatg attttaaatc gagtaaaatg tatctacgat
      121 tattttcaac aagggggaag aatgaaccca accaaacaat ccaaaaaaag ctacgaatct
      181 aagcgcgttt taaagcacgt ttcatttaac actgaaaaag aagctaattt attggaattt
      241 tccaataatt tagacttctc caaatgggta aaagaaaagc tgaaacatga acttgaatta
      301 gaaaaactga aaaaataata gaaatggctt gcatgaatcg tagatacaaa ttataatttc
      361 aacacttgct gattgcaggt aaaaaagaag cccaaaccaa gctgtaactt gatttgggca
      421 ggtggaaagc agagcggcaa ctctctttcc gcgtctatct accatgaaat agaaaggtca
      481 ttctaccatg aatactgtcc aagttttaaa ctttcaacaa agctccgtcc gtgcttcccc
      541 ccaaaatatt gacgcaatag cggaataata gtaaagttcg gttcacaggt ttggtcgcct
      601 gtttctttcg tggttattgc cgcgcttgcg gcttttgttt tgataagagt tccctgaagg
      661 gtgtatgtta aacatacacc cttgctgaaa aagccaacgg gcggactttc gggacatctc
      721 cggatgtgct gtttccacga gcagtcgacc aacctgaaac gtccgcctac ctcttcttgg
      781 tcgaagagag gctttcaaac tttcgtggag cttaaaatgc aaaacaccat ttctgtattt
      841 tctttcaaat ctcaaaatgt ccgtactcaa atcttggggg ctgaaccttg gttttgcctt
      901 ggcgatgttg cggaaattct tcaaattcaa aatgcccgtc agttgccatt aaaagaccag
      961 ggcattcaaa aatccagcgt tgcaacaaaa aaaggcaacc aagaattact tttcatcaac
     1021 gagccgaatc tctaccgagt catcttccgt tcacgcaaag ccgaagccgt caaattccaa
     1081 gactggatat ttgaagaggt tatccctcaa atccgcaaaa caggcggcta ccaaattact
     1141 cccaaaacca ccgccgacga ccgtaccgga ttgcgccggg cggttgccgc gcttgtcggg
     1201 cgcaaacgca taggctactc ctccgcgtac agtatgatac accaacgctt caacgtcgaa
     1261 gccgtcgaag gcatccccgc cgacaaactg cccgaagccg tcgcctacgt ccacgcattg
     1321 acactgcaca cgggtttggc cggcgaagtc cccgaccgcg aaccgttgcc cgcgccgcaa
     1381 cccgccctgc ccataagcgg caacgctttg gccgacattg ccgctatggt ttattacggc
     1441 acacggatga tcgaattggg caaagacgtt tccgcgccgc tgaagcagct cggctgcaaa
     1501 caggcggtta cgatgtggac ggtttggcac gaaacccgtt caatcctgaa aagatccgtc
     1561 gcagccctcg aagtgttgcg gggatatgcg gacaaagacg cctccggccg catagccgca
     1621 tgtcttgaag gcatttacgg caaggctgcg gcaaggtaaa cggaaaatgc cgcctgaagg
     1681 ttcggacggc atttttattg aagggatgat tggggatttg taggcgtttg cagatacgac
     1741 aaggggcgca ttccgcgccc catcacacgc acggacggct tgtcatcgcc tgtcgcccgt
     1801 gcgcggctgc ccatatttcg gaacagtctt gcaagcccct ttaagggaac ggttttattc
     1861 tagtacagtt tgaatgcctt ggcaacggct gttttaaccg cctgaaaatc ctcttcactg
     1921 attattggga tgcaacggtc gcgccctttg ggtttgtatc ggtctaatcg tgccaatccg
     1981 actgttgccg tcatatcgca ttttgcccga cattggatgt gcggcttgtc cggtaagggg
     2041 ttttcactca ttttgtggtg gcagtccgcc aaagggacag gctctgtgct gcttaagggt
     2101 acgaccgtta ccggtttgcc gttgtgcctg tttcgcgcta tgacgacgac agggcgtttc
     2161 ttgaccattt ccggttcttc ataaccgcga aagtcgcaca tgataactga acgttccctt
     2221 ggttggaatt ttaaaggcat tagccgctcc tgacgatgac aggcggctat tatagcagtt
     2281 cttacacaaa aaaccgcttt gtgtaaggcg gttgcaaaaa aaagccttcc aataaaaatg
     2341 ccgcctgaac ctttcagagt gcgaagcctg cccatagggt acggcatttt catttccgcc
     2401 cattattggt gcgcctgata attttgtata acgccccctt cgcgcaaaca aaacggcaaa
     2461 aatttgccgc gtccgcccga tatgtaaaaa atcgggggga atgccgacgc ttcccccgat
     2521 gcggccgcca acccggaacc gacggttcgg ttgcaaactt ccggttgaca actcaatccg
     2581 cgcccaacgc ccgtaccagc gcgccgtgcc gcgccttgca gtccttgtac aagccgatga
     2641 cttgcaacga ccacggcagc acgtccgcgc ccgtgttccc ttcaaggtgc ggcagtttcg
     2701 ggcagggccg caccaaatcg gcgggcggct taaccgccgt cgtcaacggc ggcgttgagt
     2761 tcgcgcacgc cgtcagcatc aaaacaggca ttgcggtaca caggtttttc aatgatttta
     2821 agcgtttgca catagcgcac cctttctttt tcctcacgcg ccgccttttg cgcctgatac
     2881 gcggcggacg atttgcgggc gtgttcggcg tgttcgaccg cggcggcttt gaggcgttcc
     2941 gaaacctccg acaccgccgc accgtatccg cgacggtatt gcgccgccct gtccagctgc
     3001 caagaaacgg cgaagaacgc gattgcggac aaaataagca gcggcttcca atttttcagc
     3061 aaagccccaa tcatttacgc ctcgcccgc
//
LOCUS       DAXGCP010000142         3030 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.143, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000142 DAXGCP010000000
VERSION     DAXGCP010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.143"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            213..923
                     /locus_tag="ACFJCW_002103"
     CDS             213..923
                     /locus_tag="ACFJCW_002103"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HFC4152142.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLVIITNKNEILAAELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDAANMLMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDTTRPDRIIG
                     ALPEIYENLRPQKNKDEE"
     gene            996..1457
                     /gene="recX"
                     /locus_tag="ACFJCW_002104"
     CDS             996..1457
                     /gene="recX"
                     /locus_tag="ACFJCW_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HFC4152143.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEKTSRNLLPDRSSEKQAA
                     IAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC"
     gene            1531..1692
                     /locus_tag="ACFJCW_002105"
     CDS             1531..1692
                     /locus_tag="ACFJCW_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152144.1"
                     /translation="MSEQPEKHHASPIEDERKNPVYRMGRAVAGFMLAVWAGVLALVF
                     FLVFRFWLS"
     gene            1845..2327
                     /locus_tag="ACFJCW_002106"
     CDS             1845..2327
                     /locus_tag="ACFJCW_002106"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HFC4152145.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRREISLQASGDVPCGC
                     "
     gene            complement(2725..>3030)
                     /locus_tag="ACFJCW_002107"
     CDS             complement(2725..>3030)
                     /locus_tag="ACFJCW_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HFC4152146.1"
                     /translation="GNKGVDIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSS
                     FLTAYGHNQKLLVGEGQQVKRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          804 a          900 c          677 g          649 t
ORIGIN      
        1 aaatgtccaa ttaaataaag atatagtcat cattttattt tttaaaaatt taattggaac
       61 atcgccggga tttcaaaccc ttgccagacc ccgccataaa atccgaaaac accgcccgaa
      121 aaacctgttg cgattgttaa taatctatac attagaagcc ctgtgcaaac gatgttaaaa
      181 taaacccttt caacccgaca ggaaaccgga ttatgaatgc ggccatcgaa cacgtccaag
      241 ccgtcgcctt cgatttggac ggcacactgt gcgattccgt ccccgacctt gccgccgccg
      301 cagaagcgat gttggaacaa ctcggtatga aaccgctgcc cgccaaagtg gtcgaaagct
      361 acgtcggcga cggcatcggc aaactggttc accgcgtcct caccaacgac cgtgaccgcg
      421 aagccgattc cgaactgtgg gaaaaaggtt tcgtgtccta tatgaaatac taccgcgacc
      481 atttgagcgt cttcacccgc ccctatcccg aaaccgaagc cgggctggca ttgctcaaat
      541 ccttgggcat tccgctggta atcattacca acaaaaacga aatccttgcc gccgagcttc
      601 taaaacaact gggactcgcc gactacttca gcctgatact cggcggagac agcctgcccg
      661 aaaaaaaacc cagcccgctg ccgctgcggc acgccgccga agttttgggt atcgatgccg
      721 ccaatatgct tatggtcggc gactcgcgca acgacatcat cgccgccaaa gccgccggct
      781 gcctgagtgt cggcgttacc ttcggttacg gcgatatgac gctgctctcg caagacgata
      841 cgacccgccc cgaccggatt atcggcgcgc tgcccgaaat ttacgaaaac ctgcgaccgc
      901 agaaaaacaa agacgaagaa taaaacaatc tgttcagacg gcatcggaat ccgtttccca
      961 taccgtctga atctttccgt gccgaaaccg ccgccatgaa accgcaaaaa tccctacgcg
     1021 cccgcgcgat ggacatcctc tcgcgccaag aagtcagccg catcggtctg aaacgcaaac
     1081 ttgcaccgca cgccgaaagc gaagaggagt tggaaaacgt gttaaacgaa tttgccgaac
     1141 gcaactggca gtcggatttg cgctacgccg aagcctatat ccgcagcaaa agccgcaaac
     1201 acggttcatt gaggctgaaa caggctttgg cgcaacaggg catagatgaa aaaaccagcc
     1261 gcaacctgct tcccgaccgc tcaagcgaaa agcaagccgc catagccgtg ttgcgtaaaa
     1321 aattcaaaca tcccgccgcc aacctcaaag aaaaacaaaa acaggcgcgt ttcctcgcct
     1381 atcgcggttt tgatgccgat accgttcaga cggcattgaa acacgcttgg gacgaaaatt
     1441 gggaagacag ctgctgacct tccttcttaa atctttttgc gcggcagcgt aaccttacgc
     1501 ccgtttccaa cttttccggt tgagaacaaa atgtccgaac aacccgaaaa acaccacgcc
     1561 tcccccatcg aagacgaacg caaaaacccg gtttaccgta tgggacgggc ggttgccgga
     1621 ttcatgctcg ccgtttgggc gggcgtgctg gcactcgtgt ttttcttggt tttccgtttt
     1681 tggctttcct gaacaaaatg ccgtctgaag gcttcagacg gcatcggcgg cccatttcgg
     1741 cagactatcc ctccatagct ttttttagct tgaattccac ttccccattc cctaaaattt
     1801 tcccgcaccc atttcaaaac accctttctt aaaacaggta caccatgaca caacaacgcc
     1861 aactgccttc ccacgaactc attatgtccg aactgatgat gccggacacc gccaatttca
     1921 gcggcaacgt acacggcggc gaactcctgc tcctgctcga ccaggttgcc tattcctgcg
     1981 ccagccgtta cagcggcaat tattgcgtta ccctttcggt tgacaaagtc ctgtttaaag
     2041 aacccatcca catcggcgat ttggttacct tttacgccgc tgtcaactac acgggacgca
     2101 cctcgatgga aatcggcatc cgtgtcgaag cacaaaacat ccgtacggga gaaatccgcc
     2161 ataccaacag ctgctacttc acgatggttg cggtcaaaga cggcaaaccc gtccccgtcc
     2221 ctccgctgga aatcctgacc gaccgccaac gctgccgcta cgaaaaagcc aaaaaacgca
     2281 gagaaatcag cctccaagcc tccggagacg tgccctgcgg ctgctgacgg cggcctatgc
     2341 cgtctgaaag acaggacaag cattgttccg acattcggtg taatggtttg atttattgaa
     2401 gcaaaatcgg ctgattctgg ctcatccgtt tttcaacgcc attttggaac acagccgtga
     2461 gactaagcgg ttgtgttttc atattccctt gatgcagccc taatcagtcg gacaaaatgc
     2521 cttttatccg ataaaaccgc cctccgaacg gaaataagcg gcttttccat tgcaaacgga
     2581 tgaaatcaag caaataccca aacacagtca aacaaattta tacgccccgt cccttcggaa
     2641 tgatttgaaa acacagccgc caaaacaaaa atgccgtctg aagacctttc agacggcatt
     2701 tttaacctga ttgcaaacgg aaagtcagaa cgcgatatag ctgttcgggt taaccggttt
     2761 gccgttttga cgcacctcga aatgaagctg cgtcctggaa gcatcggtat tgcccatcaa
     2821 agcaacctgc tgaccgcgtt tgacctgctg accttcgccg accagcaatt tttggttgtg
     2881 cccgtacgcg gtcaggaaag aggaattgtg ctggatgatg accaagtttc cgtatcccct
     2941 caaacctgaa ccggcataaa ccactttgcc gtcagccgcc gccaaaacgg gttgtccggc
     3001 attgccggca atatcgacac ccttgttgcc
//
LOCUS       DAXGCP010000143         2878 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.144, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000143 DAXGCP010000000
VERSION     DAXGCP010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2878
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.144"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(38..454)
                     /locus_tag="ACFJCW_002108"
                     /pseudo
     CDS             complement(38..454)
                     /locus_tag="ACFJCW_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(697..1452)
                     /locus_tag="ACFJCW_002109"
     CDS             complement(697..1452)
                     /locus_tag="ACFJCW_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HFC4152147.1"
                     /translation="MKYVRLFFLGTALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASVGAS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCASR"
     gene            complement(1630..2808)
                     /gene="nirK"
                     /locus_tag="ACFJCW_002110"
     CDS             complement(1630..2808)
                     /gene="nirK"
                     /locus_tag="ACFJCW_002110"
                     /EC_number="1.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
                     /protein_id="HFC4152148.1"
                     /translation="MKRQALAAMIASLFALAACGGEQAAQAPAETPAASAEAASSAAQ
                     ATAETPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWT
                     FDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTST
                     FSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKG
                     KKGAQGLQPFDMDKAVAEQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLV
                     SSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRA
                     FNKGALGQLKVEGAENPEIMTKKLSDTAYAGSGAASAPAASAPAASAPAASASEKSVY
                     "
BASE COUNT          587 a          699 c          860 g          732 t
ORIGIN      
        1 agaagccgcc cgggttgatc cgggcggccg tggaaaatca cttaccggca gatgaagtgt
       61 cgcggcaggt tgacggcagg tgcttggtgt cgattttgcc tttgccgccg ttgtcggtgc
      121 cggcgtcgtc ggtaacgtcg tcggcgtcgg ttttgtcgcg cttaaccggc tgtccgcaga
      181 accattttac cgaaccgtct tgacgcttgg cccacaggga gagtcttttg tcttggattt
      241 cattgtttac gccgtctggt ttcatttggg cggtaacgac gccttttgcg accgtaacgc
      301 ttttaacata tttgcctttg atgtcggagg gggaggatgc cacgccggca gagtcgttgt
      361 cggcgggcca ttcgccgtga ttcaggtaat actcggtaac ggctgatttt tgaccttcgg
      421 ccaaaaggat ggcttcggaa acttgcgcgc gggcgggaat ccggaccttg gaacaacggc
      481 aatattcaaa gattatctga aagtccggga ttccagattc ccgctttcgc gggaatgacg
      541 aaaagttgcg ggaatgacgg ttcgggcatt ccttaaatta cccgtgtatc gctgtaaatc
      601 ttagagatgg cggaatatag cggattaaca aaaaccagta cggcaaggcg aggcaacgcc
      661 gtactggttt ttgttaatcc actataattt aaggggttat cggcttgcgc agcggaagcc
      721 caagttgtgc aggacatatt tggattgcag gctggtgcgg atgccgtagc ggaggaaggc
      781 ggcatagttg gacgagtcgc tcgccccgac agatgcgccg ctgcaaaaca tttgcgcgtt
      841 ggcattgccg gaagaaagca ggctgctgtt gaaatcttcc gtccattccc aaatcagccc
      901 gtgcatatca taaacacccc agtagttcgg gcggcctttg ccgacatcgt gcaggccttt
      961 ccgtccgccg tcggcatacc aatcgagaat agtgcggttg tagccgggtt cgtttgagcc
     1021 gtttttctgc gtggcggaag caagtccggc aaattcccat tcgtcgatgg tcggcaggcg
     1081 tttgccttgt gcggcgcaat aggcgttggc ggcaaaccag gaaacattgg ttaccggttg
     1141 ttttaattcg cccgccttcg gcgcatagct gcggctgccg tttttcatcc aatgcttcag
     1201 gtaagcgggt tctgcctgtt tggaaccgat cctgcctttt tgccattggg ggtggctgtt
     1261 gacaaattcg gcaaactcgg cattggtaac gggatattta tccagtttga acggtttgac
     1321 tttaatcagg ccggtatctt ttttcagata aagcgggcgg tagctgccgc cttcgatttg
     1381 aaccatttcg gcagccgccg cttgagtacc ggcgagtgcc gtgccgagga aaaataaccg
     1441 gacgtacttc ataaagcctc ctgacaggcg gttagcattg atttttcaga cggcatttta
     1501 aacaaaaagc cgcgaatgcc gtctgaaaaa tcaatcttcc gaaaggaaag attggttgtt
     1561 aaaaaaccac tgccgtgcgt aatgaagtac ggcggcagtg gtttgtcccg ctaatgacgg
     1621 gtatccgatt taataaacgc ttttttcgga tgcagaggct gccggggcag aagcagccgg
     1681 tgcggaagca gcaggggcag aagccgcgcc gctgccggcg taagcggtat cactcaattt
     1741 tttcgtcata atttcagggt tttccgcacc ctctactttc aattgcccca acgcgccttt
     1801 gttgaatgcg cggaagatgg agtggtcgac caaagtgtag ctgcccggga tgtcgacttt
     1861 gaattcgacg atggcagaac cgccggcagg cacgatggtg ctttgtacgt tttcgttaat
     1921 cagtttgccg ccttcaacat aaactttgtc gaagatttcg ccgatgacgt ggaaggaaga
     1981 caccaagttc gggccgccgt taccgacgta catacgcacg gtttcgcctg ctttggcttt
     2041 cagggcgtta tcgccggcga tagcgcctac gtggccgttg aatacgacgt attcaggctg
     2101 ttcggcaacg gctttgtcca tatcgaacgg ttgcaggcct tgcgcgcctt ttttgccttt
     2161 ggtgtagaag tcgccttgga cgatgtagaa ctctttatcc actttcggca ggccttcttt
     2221 aggctcgacc aaaatcagac cgtacatacc gttggcgatg tgcataccga ccggcgcgac
     2281 ggcgcagtgg tagatgtaca ggcccggttg cagggctttg aagctgaatg tggaagtgcg
     2341 gcccggggcg gtaaaggtcg cggctgcacc gccgccctga ccggttgcgg cgtggaagtc
     2401 gacgttgtgc ggaacggtag aagaaggatt gttggagaat tcgacttcaa ccgtatcgcc
     2461 ttcgcgtacg cggatcatac ggcccggaac gtcgccgtca aatgtccagt agcggtattc
     2521 caccccgtcg tccattttca tggttttttc gacggtttcc atttttacgc gtactttggc
     2581 aggatagtcg cggtcgattg cgggaggtac ttcgggagcg tgggtggtca ccgcatcgat
     2641 gacgggcagt tcgcctgcag gcgtttcggc ggtagcttgt gcggcggaac ttgcggcttc
     2701 tgcggaagcg gcaggggttt cggcaggggc ttgagcagct tgttcgccac cgcaggcggc
     2761 caatgcgaat aaggaagcaa tcattgcggc taatgcttgg cgtttcataa tgttttcctt
     2821 ttgtaagaaa agtaggggga ttagttaaga acttggtgtg attatgcggt tgtcccat
//
LOCUS       DAXGCP010000144         2841 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.145, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000144 DAXGCP010000000
VERSION     DAXGCP010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2841)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2841)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2841
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.145"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            249..656
                     /locus_tag="ACFJCW_002111"
     CDS             249..656
                     /locus_tag="ACFJCW_002111"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152149.1"
                     /translation="MAKPLGGVNAAILFGHFFYWNDKTQYESGIYRTAEEIEIETGLS
                     VQEQRTARAKLRERGVLIETEKRIEHRIYYKLNLDAFDDLMLQHSGGWGINSPEMQYQ
                     QPRTSKSTFGGWGINSPEMQYQQPRTSKSTFGE"
     gene            751..1254
                     /locus_tag="ACFJCW_002112"
     CDS             751..1254
                     /locus_tag="ACFJCW_002112"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152150.1"
                     /translation="MNADAFVSADAETCGRETGEPTSPKAESDSNGNGGLSGKPKNAN
                     VPRRRKTHGVPLQEIADLYNEVLGGRLPSVQVLNDTRKRAIANRWCEMLGTAAPNGKV
                     RFGDKETGLAWFAGFFRKVAMNPFWMGENQTGFAVGFDWIFKAGNFVKILEWHPPKTN
                     QAARGRA"
     gene            1251..2612
                     /locus_tag="ACFJCW_002113"
     CDS             1251..2612
                     /locus_tag="ACFJCW_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HFC4152151.1"
                     /translation="MNRIEETEAVQSLASVGAEQNILGGILIEPTAITRCAILTPEKF
                     YQAQHRIIFRALLDMAAANEPIDIITLNDKLEARGEAENAGGLAYLIDLNQNTPSAKN
                     ISRYVGIVNDRFVERGLLKASAAIEKIAVSKDGGTVAEKLSKAADELAAAGKDAVKRE
                     TKTFGQTVEDLIGGLDKRLDGVRFGLPTGLMKLDGMTGGLPDGNLIVIAARPSMGKTV
                     LAENIARFALKQGKAVHFQSYEMSAVELARRGMAAECNIPMQNLKTGNLTQSDYANMP
                     IYVSQAKEWKFDVNCDLLNVDELCFLAKEKKLTTGLDLLVVDHLHIMPRAGRDEVAEL
                     GNISRRLKNLAAELNIPVVLVAQLNRGNTKQADKRPNMADIRGSGAIEQDANIIIMPH
                     RESYYDGNENPSIAELIIAKNRDGETGTVVCGWKGQFMKFEEEPDLAWQAPKHDEYDP
                     YSV"
     gene            2629..>2841
                     /locus_tag="ACFJCW_002114"
     CDS             2629..>2841
                     /locus_tag="ACFJCW_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152152.1"
                     /translation="MRETCFYCNHADFKTNTGTPVRGFAKCAKARDAEEKATYYPRTN
                     PCAAGAFQTASGAAVAKRTAVLGEYPG"
BASE COUNT          774 a          678 c          866 g          523 t
ORIGIN      
        1 aatacaaggt cggtaactgt aaaaatcccg ttgcccatta ctcaatcgca aagtcaggaa
       61 ttgaaccatg agccgggaac aaagaatacg cggagcccgc ttgccggtgc cggctcatat
      121 gcaggcggaa gacgcgggca aggcacggga agcgttggac gggcgggtcg aagaagtgaa
      181 aggggttgat gatgaagccg tctgaaagtt tgagagcggc aggcaggcca atcgcgtatt
      241 acccgaaatt ggcaaagcct ttgggcggtg taaatgcggc aatattattc gggcatttct
      301 tctactggaa cgataagacg cagtatgaat caggcattta ccgaacagcg gaagaaattg
      361 aaattgaaac cgggctgtcc gttcaggaac aaagaacggc acgggcaaag ctgagggaac
      421 gcggcgtatt gattgagact gaaaaacgaa ttgaacaccg catttactac aaactgaatt
      481 tagacgcttt tgatgatttg atgttgcaac attcgggggg gtggggaatc aacagccccg
      541 aaatgcaata tcaacagccc cgaacttcaa aatcaacatt cggggggtgg ggaatcaaca
      601 gccccgaaat gcaatatcaa cagccccgaa cttcaaaatc aacattcggg gagtgaggaa
      661 tcaacagccg ttataagaac agaagattta acagaagatt tagcagtata taccccctta
      721 cccccaaacg ccggaaacgg caaaggcggt ttgaacgctg acgcgtttgt ttccgctgac
      781 gcggaaacgt gcgggcggga aaccggcgaa ccgacttcgc cgaaggccga aagcgacagt
      841 aacggcaacg gcggcctttc gggaaaaccg aaaaatgcga atgttccgcg ccgccgcaaa
      901 acccacggcg taccgcttca ggaaatcgcc gatttgtaca acgaagtttt gggcggccgg
      961 ttgccaagcg tccaagtgct gaacgacacg cgcaaacggg cgattgcaaa ccgctggtgc
     1021 gagatgctgg gaacggcggc gccaaacggc aaggtgaggt tcggggacaa ggaaaccggt
     1081 ttggcctggt ttgccggttt cttccggaaa gtggcgatga acccgttttg gatgggcgaa
     1141 aaccaaacag gatttgcggt cggcttcgat tggattttca aggcgggcaa tttcgtcaaa
     1201 atccttgaat ggcatccgcc taaaacgaac caggcggcaa ggggaagggc atgaaccgaa
     1261 tcgaggaaac ggaagccgtc caatcactgg ccagcgtagg ggcggaacag aacattttgg
     1321 gcggcatctt gattgaaccg acggcgatta cgcggtgcgc aatcctgacc cctgaaaagt
     1381 tttaccaggc gcaacacagg attattttcc gcgctctgct ggatatggcg gcggcaaacg
     1441 agcctatcga catcatcacg ctgaacgaca agctggaagc gcgcggcgag gcggaaaacg
     1501 cgggtggcct ggcttacttg atagacctga accaaaacac cccaagcgcg aagaatatca
     1561 gccggtacgt tgggattgtg aacgacaggt ttgtcgagcg cggcttgctg aaggcttcgg
     1621 cggcgattga aaaaatcgcg gtttccaaag acggcgggac ggtcgcagaa aagctgtcta
     1681 aggcggccga cgaattggcg gcagccggca aagacgcggt aaagcgtgaa accaagacat
     1741 tcggccagac cgttgaggat ttgattggcg gtttggacaa aaggcttgac ggcgtgcgtt
     1801 tcggattgcc taccggcttg atgaagcttg acgggatgac cggcggtttg ccggatggaa
     1861 acctgattgt gattgcggcg cgtccgtcta tgggtaaaac ggttttggcg gaaaacattg
     1921 cgcgattcgc gctgaagcag ggcaaggcag ttcatttcca aagctacgaa atgagcgcgg
     1981 tagagctggc aaggcgcggc atggcggctg agtgcaatat ccccatgcag aacctgaaaa
     2041 ccggcaatct gacgcaaagc gattacgcca atatgccgat ttacgtcagc caagcgaaag
     2101 agtggaagtt tgacgtgaac tgcgacctgc tcaacgttga cgagctttgc tttttggcta
     2161 aggagaaaaa actcactacc ggcttggatt tgttggttgt cgatcacctt cacatcatgc
     2221 caagggcagg gagggacgag gtggcggagt tggggaatat atcgcgccgt ttgaaaaact
     2281 tggcggcaga gctgaatatc cccgtcgtct tggttgccca gttgaacagg ggaaacacaa
     2341 agcaggcaga caaacgcccg aacatggcag acattcgcgg cagcggcgcg attgagcaag
     2401 acgcaaacat catcatcatg ccgcaccgcg aaagctacta cgacggaaac gagaatccga
     2461 gcattgccga gctgattatc gccaagaacc gggacggcga aacgggaacg gtggtttgcg
     2521 gctggaaagg gcaatttatg aagttcgagg aagagcctga tttggcatgg caagccccca
     2581 aacatgatga atatgaccct tacagtgtct agtgcggcag accggtaaat gcgtgaaacc
     2641 tgtttctatt gcaaccatgc cgacttcaaa accaacaccg gcacgccggt gcgcggtttt
     2701 gcgaaatgcg cgaaggcgcg ggatgcggag gaaaaagcga cgtactaccc gcgaaccaat
     2761 ccgtgcgccg ccggggcgtt tcagacggca tcgggggcgg cagtcgcaaa aaggacggcg
     2821 gtgcttgggg aataccccgg c
//
LOCUS       DAXGCP010000145         2598 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.146, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000145 DAXGCP010000000
VERSION     DAXGCP010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.146"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            96..305
                     /locus_tag="ACFJCW_002115"
     CDS             96..305
                     /locus_tag="ACFJCW_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152153.1"
                     /translation="MKLIDFEGNLVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKNKVLLLDKELKKIYDTWDKC"
     gene            406..1251
                     /gene="mafB"
                     /locus_tag="ACFJCW_002116"
                     /pseudo
     CDS             406..1251
                     /gene="mafB"
                     /locus_tag="ACFJCW_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            1261..1467
                     /locus_tag="ACFJCW_002117"
     CDS             1261..1467
                     /locus_tag="ACFJCW_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152154.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            1707..2459
                     /locus_tag="ACFJCW_002118"
                     /pseudo
     CDS             1707..2459
                     /locus_tag="ACFJCW_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            2456..>2598
                     /locus_tag="ACFJCW_002119"
     CDS             2456..>2598
                     /locus_tag="ACFJCW_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm8 family immunity protein"
                     /protein_id="HFC4152155.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSL"
BASE COUNT          882 a          469 c          571 g          676 t
ORIGIN      
        1 tctaaatatc caagactaaa gatggtggga cagcatttag accaaaaaca ggtaaacagt
       61 attttgatga caaattaaaa taaaaggaat tattcatgaa attaattgat tttgaaggga
      121 atttagttaa aattagtctc gataaagatg agttgtatat tattcaagca attgtaggag
      181 aaatttattc aggcgtatgc gtggattgta gagattttga gataattcat ggtgttgaaa
      241 aaaataaagt tcttcttttg gataaagaac ttaaaaaaat atatgatact tgggataaat
      301 gttagctaga tagggtgggc actcgttgcc caccttttgc cgtatattaa aaatcctttt
      361 caggctgcct gaaactgggt gggcatcaat gccaatccta actgtgcgga tgaagcagga
      421 aaactgatat gggaagacga ccccgataaa aattggcggg ctaaccgtat ggacgatatt
      481 cgcggcatcg tccaaggtgc ggttaatcct tttttaacgg gttttcaggg attgggagtt
      541 ggggcaatta cagacagtgc ggtaagcccg gtaacctatg cggcagcacg gaaaacttta
      601 cagggtattc acaatttagg aaatttaagt ccggaagcac aacttgctgc cgcgagccta
      661 ttacaggaca gtgcctttgc ggtaaaagac ggcatcaatt ccgccaaaca atgggctgat
      721 gcccatccga acattacagc tactgcccaa actgcccttg ccgtagcaga ggctgcaggt
      781 acggtttggg gcggtaaaaa agtagaactt aacccggcca aatgggattg ggttaaaaat
      841 accggctata aaacacctgc tgttcgcacc atgcatactt tggatgggga aatggtcggt
      901 gggaatagac cgcctaaatc tataacgtcc aacagcaaag cagatgcttc cacacaaccg
      961 tctttacaag cgcaactaat tggagaacaa attagtagtg ggcatgctta taacaagcat
     1021 gtcataagac aacaagaatt tatggattta aatatcaatt caccagcaga ttttgctcgg
     1081 catattgaaa atattgttag ccatccaaca aatatgaaag agttacctcg cggtagaact
     1141 gcgtattggg atgataaaac agggacaata gttatccgag ataaaaattc tgacgatgga
     1201 ggcacagcat ttagaccaac atcaggtaaa aaatattatg atgatttata ggaaaaagcc
     1261 atgaatatac tatccataaa taatcaaaac tcaactattt cactaactca agatgaagtt
     1321 tttgttttac gagctatctt gaatgagata tatgcgggcg tatgtgtaga ttcaagagaa
     1381 tttgaaaatg tatctggtgt tagaaaacat gaagtagata atttacaaca acagtttgct
     1441 ggaatttata aaaaaatgac aacttaacaa cccaaatttt tgtcagagcc tagtgcaaat
     1501 tacaactatg attctattgt agccgaaatg aaagaaaaaa atcatgggtt ggcgacaggg
     1561 ttgatgttgt taatatgcct gatggagcac ccactagcag ccgtagatcg gattctcgaa
     1621 tccgacattt tccaacagcg gcatctcgga aacgataggc gcgtcaaata tttttgtcgg
     1681 atacaaataa atatccgacc tacatttctg cgcagcaaac tttacagggt attcacgatt
     1741 taggaaattt aagtcccgca gcacaacttg cggctgcaac cgcattacaa gacagtgcct
     1801 ttgcggtaaa agacggcatc aattccgcca gacaatgggc tgatgcccat ccgaatataa
     1861 ctgcaacagc ccaaactgcc cttgccgtag cagaggccgc aggtacggtt tggggcggta
     1921 aaaaagtaga acttaacccg gccaaatggg attgggttaa aaataccggc tataaaacac
     1981 ctgctgttcg caccatgcat actttggatg gggagatggc cggtgggaat agaccgccta
     2041 aatctataac gtcgaaagga aaagctaatg ctgcaaccta tcctaagttg gttaatcagc
     2101 taaatgagca aaacttaaat aacattgcgg ctcaagattc aaggttagca agtgctgtaa
     2161 aagattggaa aacaatacaa ccaaataaaa agggggaaat taattttggt attggttctg
     2221 caactcgtca agaggctgaa cagttaggaa aaatttgggt tggagacggg gctaagccag
     2281 ttagtagtcc atcttgtcaa ggatgtatgt taagtgcaga tggcacaagg ctatatcgtc
     2341 ctccaactac aaaatcaaac acccctgaat cacttaaccc aacgggagtg caagctaatt
     2401 ttgttactag aagtgttgat ggaaaaacct taactaatgg acatttgaat ataaaatgat
     2461 taaattggac ttaaaaagca taaatttata tgatattgat tttgaaaaat ttacccccga
     2521 aattccagat aattttcata gatggataga tttggatatc ggaatcgaag gagaacaagg
     2581 ctcatctatt ttttcact
//
LOCUS       DAXGCP010000146         2591 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.147, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000146 DAXGCP010000000
VERSION     DAXGCP010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2591
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.147"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            253..957
                     /locus_tag="ACFJCW_002120"
     CDS             253..957
                     /locus_tag="ACFJCW_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC4152156.1"
                     /translation="MVKTADGYKAIARIRAGESVLSKDEASGVTGYKPVTARYGNPYR
                     ETVYIEVSDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWRTYFVKGNQAETEGVWVHNDCPYGNLSDNKSVGEGKKFTPAQK
                     KAIIQENMNRNGGVVKSDQSGEVLVRPKKSQKGITPPSNEWQIDHVQAKSKGGSNSYK
                     NAQVLSRRENIKKSNK"
     gene            966..1238
                     /locus_tag="ACFJCW_002121"
     CDS             966..1238
                     /locus_tag="ACFJCW_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152157.1"
                     /translation="MQWKFEDPQNTAVITTRRILSKKNGILEVWHDADDGMWQFLDGN
                     EIDEGDAVIVSLKEIVTIDSSVNLLSNLPLGGYAWRNTISEKWNFD"
     gene            1405..1635
                     /locus_tag="ACFJCW_002122"
     CDS             1405..1635
                     /locus_tag="ACFJCW_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HFC4152158.1"
                     /translation="METLDERIKNLGKSLEDRIDANLIDATLEYITFSERLLAFETLC
                     DYIEDFNIQLTEKESQEISFINKEFGIESTSD"
     gene            1786..2415
                     /locus_tag="ACFJCW_002123"
     CDS             1786..2415
                     /locus_tag="ACFJCW_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HFC4152159.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTAQYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSDGKWIKAEDLKAGSRLLSESGRTQTVRNTVV
                     KPKPLKAYNLTVADWHTYFVKGNQAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMSKNERLKIKQKIKNIAKNANRKTKGEEHGRRGR"
     gene            2396..>2591
                     /locus_tag="ACFJCW_002124"
     CDS             2396..>2591
                     /locus_tag="ACFJCW_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152160.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITQYKNILETFMYEPPDEF
                     GTEYYESPDSNLLISVKKNKI"
BASE COUNT          920 a          519 c          510 g          642 t
ORIGIN      
        1 aaataaataa tggaaatttg atacaaacga ctaattaaat ggacaaatat aagttagatt
       61 ggacacccaa acctaaaaac tgtctgaaac tcaatttggt tttcagtaag cgtaggttgg
      121 cttaaaaacc caaccaccaa aatgccgtct gaagcggtat tcagctttca gacggcattt
      181 tgatgaatga aacaggatat tgagaactaa gttctttaaa aatcctacac ctgccctttc
      241 cacggcagca ccttggtcaa aacggcagac ggctacaaag ccattgcccg tatccgagcc
      301 ggcgagagcg tcctctccaa ggacgaggca agcggggtaa cgggatacaa acccgttacc
      361 gcccgatacg gtaatccgta tcgggaaacc gtttacattg aagtttcaga cggcatcggc
      421 aacagccaaa ccctgatttc caaccgcatc catccgtttt acagtcaagg aaaatggata
      481 caggcaggtc gtctgaaaaa aggcgacacc ctgctttccg aaagcggtgc aaaacagacg
      541 gttcaaaaca ttaccctcaa acagcagccg ctcaaagcct acaatctgac cgttgccgac
      601 tggcgtactt actttgtcaa gggcaatcag gcggaaacgg aaggagtttg ggttcataat
      661 gattgtccgt atggaaattt atcggataat aaatctgttg gcgaaggaaa aaaatttaca
      721 ccagctcaaa agaaagcaat catccaagaa aacatgaata gaaacggagg ggtagtgaag
      781 tctgaccaat ctggagaagt tttggttcgt cctaaaaaga gccaaaaagg tatcaccccc
      841 ccatcaaatg aatggcagat tgaccatgtg caagcaaaaa gtaaaggagg ttcaaatagt
      901 tataaaaatg cacaggtttt atccagaaga gaaaatatta agaaatcaaa taaataggta
      961 tcaatatgca atggaaattt gaagatcctc aaaatactgc tgttattacc accagaagaa
     1021 ttttgtctaa aaaaaacgga atcttagaag tatggcatga tgctgatgat ggaatgtggc
     1081 aattcttaga tggcaatgaa attgatgaag gagatgctgt gatagttagt ttaaaagaaa
     1141 ttgtcactat tgattcctca gtcaatctct taagtaattt acctcttggt ggttacgctt
     1201 ggagaaatac tatatcggaa aaatggaatt ttgattagca agcgtaggtt aggttaaaaa
     1261 aaccaacaat caaaggtcgt ctgaaacagt gtttagtttt tcaaacgacc ttttcttcaa
     1321 ttaacataga atgttgggtc tcgacccaac ctacacgctt actaatctca aatataacct
     1381 tatgaaataa tgagtattta aaagatggaa acattagacg aacgaataaa gaatttagga
     1441 aaatctcttg aagatagaat tgacgctaat ctaattgatg ccacactaga gtacattact
     1501 ttttcagaac gtttgctagc ttttgaaacg ctatgtgatt atattgaaga tttcaatatc
     1561 cagcttacgg aaaaagaatc ccaagaaatc tcttttatta ataaggaatt tggaattgaa
     1621 agtacatcag attaataaat attaggtcgg tttaaaaacc caacaatcac aaggtcttct
     1681 gaaatcgtgt ttaattttca gacgacctat ttccttcatt tgaaacagga tattgaaaac
     1741 taagttcttc aaaaatccta cacctgctcc ttccacggca gcaccttggt caaaacggca
     1801 gacggctaca aagccattgc ccatattcaa gccggcgacc gcgtcttcgc caaagatgaa
     1861 accagtggaa aaactggata caaacccgtt accgcccaat acggtaatcc gtatcaagaa
     1921 accgtttaca ttaaagtttc agacggcatc ggcaacagcc aaaccctgat ttccaaccgc
     1981 atccatccgt tttattcgga tgggaaatgg attaaagcgg aagatttaaa ggcgggaagc
     2041 agactgttat ccgaaagcgg cagaacccaa accgtccgca acaccgttgt caaaccaaaa
     2101 ccgctcaaag cctacaatct gaccgttgcc gactggcata cttacttcgt caagggtaat
     2161 caggcggaaa cggaaggggt ttgggttcat aattcttgtc cgcctaaaag aacaggaagc
     2221 tccaagaatg aaaaacatgg agacggcggt cgaagtcaaa tatcagcgga atcaaaaatt
     2281 gctgaattaa caaataaaat tattcccgga atgtccaaaa atgaacgctt aaagattaag
     2341 caaaaaatca aaaatattgc caaaaatgcc aatcgaaaaa caaaaggaga agagcatggt
     2401 cgacgcggtc gttaaaactc ccgaattttt accttttact tctgtaggaa tattccgttt
     2461 tggtgctgat ataacacagt acaaaaacat actggaaact tttatgtatg aacctcctga
     2521 tgagtttgga acagaatatt atgaatctcc cgactcaaat ttactcattt ccgtcaaaaa
     2581 aaacaaaatt a
//
LOCUS       DAXGCP010000147         2399 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.148, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000147 DAXGCP010000000
VERSION     DAXGCP010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2399
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.148"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            69..707
                     /locus_tag="ACFJCW_002125"
     CDS             69..707
                     /locus_tag="ACFJCW_002125"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HFC4152161.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAVDLSRALVEGGIPTLEI
                     TLRTPVGLEAIRLIAKEMPNAIIGAGTVTNPEQLKAVEDAGAVFAISPGLHESLARAG
                     RNSGIPLIPGVATPGEVQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(896..1081)
                     /locus_tag="ACFJCW_002126"
     CDS             complement(896..1081)
                     /locus_tag="ACFJCW_002126"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152162.1"
                     /translation="MGYFGGNGGYLKRKQPKNLWLDVGCLKKRNFAKVSERYFLTTVN
                     LLVSAAHHGILPIGRFL"
     gene            complement(1092..1204)
                     /locus_tag="ACFJCW_002127"
                     /pseudo
     CDS             complement(1092..1204)
                     /locus_tag="ACFJCW_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(1302..2342)
                     /locus_tag="ACFJCW_002128"
     CDS             complement(1302..2342)
                     /locus_tag="ACFJCW_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HFC4152163.1"
                     /translation="MKAMVYHGANDIRFEEKPRPQIIDPTDAVVKIVKTTICGTDLGI
                     WKGKNPEVADGRILGHEGIGIVEEVGEAVKNIKVGDKVIISCVSKCCTCDNCKIQLYS
                     HCRNGGWILGYMIDGTQAEYVRTPYADNSLVPPHDNVNEEIALLLSDALPTAHEIGVQ
                     YGDVKPGDTVFIAGAGPVGMSALLTAQLYSPAAIIVCDMDENRLKPAKELGATHTISP
                     ASGDVSKQVFAIVGEDGVDCAIEAVGIPATWNMCQDIVKPGGHIAVVGVHGQSVDFKL
                     EKLWIKNLAITTGLVNANTTEILMKAIFSSSVDYTKMLTHRFKFSELEKAYDVFKHAA
                     ENQAMKVVLEAD"
BASE COUNT          581 a          681 c          557 g          580 t
ORIGIN      
        1 gaaaacttaa ccccccccca tcccgtttga cctcaacaaa aacgacaccc cccacttgga
       61 gaaccgaaat gtccaaactg accccccgcg aaatcctgac cgccggcgca gttgtgcctg
      121 tgatggcgat tgacgactta agcaccgccg tcgatttgtc ccgcgccctt gtcgaaggcg
      181 gcatccccac cctcgaaatt accttgcgca cccccgtcgg actcgaggcc atccgcctga
      241 ttgccaaaga aatgcccaac gccatcatcg gcgcaggtac ggtaaccaat cccgaacagc
      301 tcaaagccgt cgaagacgca ggcgcggttt tcgccatcag cccgggtttg cacgaatccc
      361 tcgccagagc cggccgcaac agcggcattc ccctgattcc cggcgttgcc actccgggcg
      421 aagtccaact ggctttggaa cacggcatcg acacactcaa actcttccct gccgaagtcg
      481 ttggcggcaa agcgatgctc aaagccctct acggacctta cgccgacgta cgcttctgcc
      541 cgaccggcgg catcagcctc gccactgcgc ccgattactt ggcattgccc aacgtcttat
      601 gcgtcggcgg ctcttggctg acaccgaaag aagctgtaaa aaacaaagac tgggacacca
      661 tcacccgcct cgccaaagaa gcggcggcat tgaaacccaa agcctgaacc gcatcgtaaa
      721 aatgccgtct gaagcccttt ccagtctcag acggcatttt gccgcttggc gactcagtcg
      781 gcatacacag cagcaccgcc cctaaaatgc ccatccatct ccagaacaat gcgaatgacg
      841 cgcgatatgc ggagacctat gacgaaaaaa taattataat atatttatca attagtcata
      901 aaaatcgccc tatcggtaaa atgccgtgat gagcggctga aactaacaag ttaaccgtcg
      961 ttaaaaaata acgctcagag acctttgcaa aattcctttt cttcaaacag ccgacatcca
     1021 accacaggtt tttcggctgt tttcgtttca aataaccgcc gttcccacca aaatatccca
     1081 ttaatccccc ttaaatatag tggattaaat ttaaaccagt acggcgttac ctcgccttgc
     1141 cgtactattt tactgtctgc ggcttcgttg ccttgtcctg atttaaattt aatccactat
     1201 acctgattga tcaggaacag cccgttttac acggctgaaa aaatgccgtc tgaaacacgt
     1261 tcagacggca tccgcttaaa aaacaactga ttcaacggcg attaatccgc ttccaaaacc
     1321 actttcatcg cttggttttc ggcggcgtgt ttgaacacgt cgtaggcttt ttccaattcg
     1381 ctgaatttga aacggtgggt caacattttg gtgtaatcca ctgagctgct gaaaattgcc
     1441 ttcatcagta tttcggtggt gttggcattg accaaaccgg tagtgatggc aagattttta
     1501 atccacagtt tttccagttt gaaatcaacg gattgaccgt gtacgccgac gacggcgata
     1561 tgaccgccgg gtttcacgat gtcttggcac atattccaag ttgcagggat accgaccgct
     1621 tcgatggcac aatctacgcc gtcttcgccg acgatggcga aaacttgttt ggagacgtcg
     1681 ccggaagcgg ggctgatggt atgggtcgcg cccaactctt tcgccggttt caaacggttt
     1741 tcgtccatat cgcacacgat aatggcggca gggctataca gttgggcggt caacaaggcg
     1801 gacataccga cagggccggc acctgcgatg aatacggtat cgccgggttt cacatcgccg
     1861 tattgcacgc cgatttcgtg ggcggtcggt aaagcgtcgc tcaacagcag ggcgatttct
     1921 tcgttgacgt tgtcgtgcgg cggcacgagg ctgttgtcgg cataaggcgt gcggacgtat
     1981 tcggcctgcg tgccgtcaat catatagccc aaaatccagc cgccgttgcg gcagtgcgaa
     2041 taaagttgga ttttgcagtt gtcgcaagtg cagcatttgc tgacgcatga aataatgact
     2101 ttatcgccga ctttgatgtt ttttacagcc tcgccgactt cttctacaat accgatgcct
     2161 tcatgaccga ggatacgacc gtcggcgact tcggggtttt tgcctttcca aatacccaag
     2221 tcggtaccgc aaatcgtggt tttgacgatt ttcaccaccg catcggtcgg atcgataatc
     2281 tgcgggcggg gtttttcttc aaaacggatg tcgtttgcgc cgtgataaac cattgctttc
     2341 atgctgatac tccttgcttg ttgataaata atttcaatac cacaataaag tttctttat
//
LOCUS       DAXGCP010000148         2377 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.149, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000148 DAXGCP010000000
VERSION     DAXGCP010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2377)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2377)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2377
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.149"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            172..366
                     /locus_tag="ACFJCW_002129"
     CDS             172..366
                     /locus_tag="ACFJCW_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4152164.1"
                     /translation="MDSEYLDPQQCADILSVKKRTFLERYAPRPDFPARISVSKKRFW
                     WKKEEVEGWLDRQKEKRPVM"
     gene            complement(422..506)
                     /locus_tag="ACFJCW_002130"
     tRNA            complement(422..506)
                     /locus_tag="ACFJCW_002130"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(470..472),aa:Leu,seq:tag)
     gene            657..1331
                     /locus_tag="ACFJCW_002131"
     CDS             657..1331
                     /locus_tag="ACFJCW_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152165.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRAAYLTAQTVMDMGMASIDRSV
                     LWRNDEGWKLADYLPCDDVRENALKRLFMALDSVFSRSTGVRSAAVYALMPSENAALR
                     LVCLSQQGEGLENIWEQDGNITDVSLACRSAQSGWMNVASDVRRWLNLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECADTAAQAEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            1324..1917
                     /gene="ribA"
                     /locus_tag="ACFJCW_002132"
     CDS             1324..1917
                     /gene="ribA"
                     /locus_tag="ACFJCW_002132"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HFC4152166.1"
                     /translation="MSELLDHVASCRLPTEWGVFTMHGFEEANGQEHVALTVGNCSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQAEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQEQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENERYLQTKADKLGHLMSE"
     gene            2085..2267
                     /locus_tag="ACFJCW_002133"
                     /pseudo
     CDS             2085..2267
                     /locus_tag="ACFJCW_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239093.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            2270..>2377
                     /locus_tag="ACFJCW_002134"
     CDS             2270..>2377
                     /locus_tag="ACFJCW_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HFC4152167.1"
                     /translation="MRNAVGLDISKLTFDASAMVGNAEYSAKFDNDSKGL"
BASE COUNT          586 a          547 c          670 g          574 t
ORIGIN      
        1 aactgcgcct attgcaacaa accgcctgcc gcttcaaagc cgccctcgaa acggccgcgt
       61 ggaaacacta cgtccgcgcc atcaaagaat ccgagccggt accggatgcc gaagcgcgcc
      121 ggaagcggaa aaaacaggcg gcgtaaatat aattaagttt ggaggtttta aatggatagc
      181 gaatacctag acccgcagca atgcgcagat attttatccg taaaaaagcg tacattttta
      241 gagcggtacg caccgcgtcc ggatttcccc gcgcgaatat ccgtatcgaa gaaacgtttt
      301 tggtggaaaa aagaagaagt cgaaggatgg ctagaccgcc aaaaagaaaa acgcccggtg
      361 atgtgatttg caccacattt gcaccaagtg gcatataaca ttatgaaaga tataaaaatt
      421 ttggtgcgga cggagagact cgaactctca cacctctcgg cgccagaacc taaatctggt
      481 gcgtctacca atttcgccac gtccgcataa gggtggagat tatacagatt ttgtccgatt
      541 gcgcaaggct ttggacgtaa tagttgaggc ttatgctttg cagcggtaaa atccgctatt
      601 cgtccgcctg gcatcggaat cgggcggttt tttgttttta ttgacggaat ttgggtatgc
      661 ctgctgcttt gattaaggat tttctgctga ctcagggttt gaagctgccg cttgacgagg
      721 ttcgggcggc gtatctgacg gcgcagacgg taatggatat ggggatggct tcgattgacc
      781 gttctgtttt gtggcgcaat gatgagggtt ggaaacttgc cgattacctg ccgtgcgatg
      841 atgtccgcga aaatgccctg aaacggcttt ttatggcttt ggattcggtg ttttcacgct
      901 cgacaggtgt ccggagcgcg gcggtttatg ccttgatgcc gtctgaaaac gccgccctcc
      961 ggctggtgtg cctgtcccaa cagggcgaag gtttggaaaa catatgggag caggatggaa
     1021 atattaccga tgtttcgctt gcctgccgtt cggcgcaaag cggttggatg aatgttgcct
     1081 cggatgtacg ccgttggttg aatttgggtg agctttcggg agaacgcaat catgcttcgg
     1141 cggcgcaaat ttccattccc gtttgcacgg agagcggcgg tgtattgggc gtggttcatg
     1201 tggaatttga atgcgcagag tgtgcggata cggcggcgca ggcggaatgg gtggctcttg
     1261 ccttggcttt gtccgaacct ttgaagcaac ttttgggcat cactgccgca gaaggagatg
     1321 aaaatgtctg aattattaga ccatgtcgct tcctgccgtc tgccgaccga atggggcgta
     1381 tttacgatgc acggttttga agaggcaaac gggcaggaac acgtcgcgct gaccgtcggc
     1441 aattgttcag acggcaatcc ggtgttgacg cgcatccact ccgaatgtct gacgggcgac
     1501 gcgctgttct cgagaaaatg cgactgcgga ccgcaacttg aagcggcaat gagggcggta
     1561 caggcagagg ggcgcggcat catcgtctat ctgcgtcagg aaggacgcgg catcgggctg
     1621 attaacaaaa tccgcgccta tcatctgcaa gaacaaggta tggataccgt tgaagccaat
     1681 ttggcactcg ggctgcccgt cgatgcccgc gatttccgtt tggcgcaatc tatctacgaa
     1741 tatctgggca tccgctcggt caaactgttg accaacaacc ccgaaaaaat ccaaaccctg
     1801 aaagatgcgg ggattaacgt ggtcgaacgc attcccctgc acgtcgggga aaatctggaa
     1861 aacgagcgtt atctccaaac caaagcagac aagctggggc atttgatgtc ggaataaggc
     1921 aaagttgcag ggaacgggca tcctgcgccg tctttcggga aacaggtttc catagcttga
     1981 taaagcaata agttttatca agttgcaggg tgcggatgca aacgcattgc gagcgcgggt
     2041 ttgaggcata cgcgcaaaca tcttaataca acgtattgat atttatgatt ttctctatca
     2101 tcgtccctat ttacaatgtg gaaaaatacc ttcgctgctg cgtggattcc gtgcttgccg
     2161 aaaattttgc cgattatgaa atgattttgg tcgatgacgg ttcgccggac ggctgcggga
     2221 agatttgcga cgaatatgca ggcaaatatc cgcatataag ggtaatccca tgcgtaacgc
     2281 cgtaggatta gacatatcca agctgacatt tgacgcatcc gccatggtcg gcaatgccga
     2341 atattcggca aagtttgaca acgattcaaa aggttta
//
LOCUS       DAXGCP010000149         2275 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.150, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000149 DAXGCP010000000
VERSION     DAXGCP010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.150"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..155)
                     /locus_tag="ACFJCW_002135"
     CDS             complement(<1..155)
                     /locus_tag="ACFJCW_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HFC4152168.1"
                     /translation="MSTFFRQTAQAMTAKHIGRFPLSELDQVIDWQPIEQYLNRQKTR
                     YLRDRRGR"
     gene            complement(265..1233)
                     /gene="ispH"
                     /locus_tag="ACFJCW_002136"
                     /gene_synonym="lytB"
     CDS             complement(265..1233)
                     /gene="ispH"
                     /locus_tag="ACFJCW_002136"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HFC4152169.1"
                     /translation="MNGKTIILANPRGFCAGVDRAISIVERALEEFGAPVYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVQQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHAEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAASRGIDAYMVDNASYLQRTWFEGKSKVGVTAGASAPEVLV
                     REVLAAIRGWGHETVREGGGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(1263..1757)
                     /gene="lspA"
                     /locus_tag="ACFJCW_002137"
     CDS             complement(1263..1757)
                     /gene="lspA"
                     /locus_tag="ACFJCW_002137"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HFC4152170.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKIGAAM
                     IIGGASGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     SKKT"
BASE COUNT          502 a          639 c          599 g          535 t
ORIGIN      
        1 cggccgcggc ggtctctgag gtaacgggtt ttttgacggt tcaggtattg ttcgatcggc
       61 tgccaatcaa tcacctggtc caactccgat agcgggaagc ggccgatgtg tttggcagtc
      121 atggcttgtg cggtttgccg gaagaaggtg ctcatgggaa atcccctaaa tgccttggtg
      181 ggaatttagg ggattttggg gatttttgca aaggtctcgg catttgtatt gcccaaacat
      241 ccgatgcctg cgttaacgcc tgcgtcaacg tttgcacaaa tcgggtttgg tttcgccctc
      301 gcggcgcagc tccttgggca ggacgaacac gatgctttct tccgcgcccc ccccttcgcg
      361 cacggtttca tgcccccatc cgcgtatggc tgccaatact tcccgcacca acacttcggg
      421 cgcggacgcg cctgccgtta cgccgacttt gcttttgcct tcaaaccacg tgcgttgcag
      481 gtaggacgcg ttgtccacca tatacgcatc gattccgcgc gatgccgcca cttcgcgcag
      541 gcggttgctg ttggacgaat tgggcgaacc gaccacaatc acgatgtcgc actgttccgc
      601 cagctctttg acggcggttt gccggttggt cgtcgcatag cagatgtctt ccttgtgcgg
      661 attgcggata ttggggaaac gcgcgttcag cgcggcgatg atgtctttgg tttcatcgac
      721 cgagagcgtg gtttggctga cataggcgag tttgtcgggg tttctgactt cgagttttgc
      781 cacatctccg accgtttcga ccaaaagcat tttgcccggt gcaagctgcc ccatcgtgcc
      841 ttcgacctcg gcgtgcccct tatgcccgat catgatgatt tcacagtctt gggcatccag
      901 tcgggcgact tccttatgca ctttcgtcac cagcgggcaa gtcgcatcaa atacccggaa
      961 accgcgctcc gccgcttcct gctgcaccgc cttcgatacg ccgtgtgccg aataaaccag
     1021 tgtcgcgccc ggcggcactt ccgccaagtc ttcgataaac accgcgcctt tttcgcgcag
     1081 gttgtccacg acgaatttgt tgtggacgac ttcgtggcgc acataaaccg gcgcgccgaa
     1141 ttcttccaaa gcacgttcga caatactgat tgcccgatcc acaccggcgc agaagccgcg
     1201 cggattggca aggatgatgg tttttccgtt cataagtttt gcattccgtg ttcagacggc
     1261 attcacgttt ttttgctatc tttgcgatgg acgatattgt caagcaccgc caacaccgca
     1321 ccgacgcaga taaagctgtc ggcaatatta aaggcgggat aaaaccaatt ttgccaataa
     1381 aacaataaga aatcgacgac atgaccgtgt atcaggcgat cgatgacatt gcccgacgca
     1441 ccgccgataa tcattgccgc cccgattttg ccgagggctg caaactcgtc gcgcaagatg
     1501 gcgcgtacca aatacgcgct caccgccacc gccagcacca aaaaaaagta tttctgccag
     1561 ccgccctgat cggcaaggaa gctgaatgcc gcgcccggat tgtacaccag cgtcagatcg
     1621 aaaaacgaag ggatgacgtt gacgcgttcc cgatactgaa acgacgacag caccgcccac
     1681 ttcgaccact ggtccagcac gatggcggca agtgccaata cccaatagcg cgttttactt
     1741 gaaacagatg aagacatatt tttcaacagc cggataaaag agtgccattc tacccgaaaa
     1801 cccccctttc ctgtacccga aacggcaaat gccgtaatct tgaaacccgt cattcccgcg
     1861 caggcgggaa tccggacctg tccgcacgga aacttatcgg ataaaacggt tgcccaaacc
     1921 ccgcgtccta gattcccact tccgtgggaa tgacggttcg gttgcgtagg gccgggtggt
     1981 cgaaaaggcg gattcgatgg attcgatgaa aacggtagac atgttggatt gatggaaatg
     2041 gcgggccgaa gcacacccta cggcccgccg gatttccgcc tgcgcgggaa tgacggggtt
     2101 tcaggttgct gtttcaggtt tctgttttta agtttctgtt tcggtttgat attttataga
     2161 aatgacgaaa ttttagattg caagaactta tcccctccgc cgtcattccc acggaagtgg
     2221 gaatctagaa ataaaaagca gcaggaattt atcggaaata actgaaaccg aacgg
//
LOCUS       DAXGCP010000150         2249 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.151, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000150 DAXGCP010000000
VERSION     DAXGCP010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2249)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2249)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2249
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.151"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..377)
                     /locus_tag="ACFJCW_002138"
     CDS             complement(<1..377)
                     /locus_tag="ACFJCW_002138"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152171.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGEWLKHIYEFNRESFIFSDVLLQKGESEENFSEIVLKSIKNN
                     KILTVEVRSGLHFDLRNIYRIEM"
     gene            complement(435..800)
                     /locus_tag="ACFJCW_002139"
     CDS             complement(435..800)
                     /locus_tag="ACFJCW_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152172.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMPSDDLFLKCLQSSYKAYSETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(782..1321)
                     /locus_tag="ACFJCW_002140"
     CDS             complement(782..1321)
                     /locus_tag="ACFJCW_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152173.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAGGLGAIPGDV
                     GAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQGI
                     GRHRPWESKSTDRSWKNRF"
     gene            complement(1364..2230)
                     /locus_tag="ACFJCW_002141"
     CDS             complement(1364..2230)
                     /locus_tag="ACFJCW_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HFC4152174.1"
                     /translation="MKNILLVFVSFVPLCVRTDLPLNIEDIMTDKGKWKLETSLTYLN
                     SENSRSELAAPVYIQTGSASFIPVPTEIQENGSNTDMLAGTLGLRYGLTGNTDIYGSG
                     SYLWHEERKLDGNGKTRNKRMSDISAGISHTFLKDGKNPALIAFLESTVYEKSRNKAS
                     SGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDDVKYKAGNYWMLNPNISFAAND
                     RISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTAALNASARFNVSGQS
                     SSELKLGVQHTF"
BASE COUNT          586 a          500 c          484 g          679 t
ORIGIN      
        1 tacatctcaa tacgataaat atttcttaag tcaaaatgca agcctgaccg tacctcaact
       61 gtcaaaattt tattattttt tattgatttt aagacaattt ctgaaaaatt ctcttcgctt
      121 tctccctttt gtagaagcac atcagaaaaa ataaaacttt cccgattaaa ttcataaata
      181 tgtttcaacc attcacctcc tctttctgta aggcaagatt cagtttcatt cttccttatt
      241 gtataaatat ttccttcaca aaatctgaaa taaatccata aatccatctt atccataatt
      301 aaagaaaaag tttcacctcg agattttgtc aacaattcgc aaggttgcga tgttgcaatc
      361 aaatagccga aagacatttt ttacctcata catggtcgaa atcagtttct gttagttcag
      421 aatccatttt ttcgtcaaca actgaatccg catttttgaa ttaacgtttt catcagctgc
      481 cgtttatcta aaccggcagg ttcagtttca gaataagcct tatatgaaga ctgtaagcat
      541 ttcagaaaaa gatcatcaga aggcatatct gccgaatcaa atacaactgt tttgattttg
      601 gtacttaccc aaaacccttt ttgctctttt tctactatac ggaaattcag aatatttcca
      661 accgaatcaa aagcacggta aacatcatcc atcaaatcct gcggctctat tttcttttcc
      721 aattccgaca atccttgaaa tatatccaaa gacacatctt caaatagaaa aaaaggagga
      781 gttagaagcg gtttttccat gatctgtccg tagattttga ttcccaaggg cgatgacgac
      841 caattccctg tccaggcaaa gtcttgcccg tattatccgt aactcgacga tgataatggg
      901 gaaattttcc aataggatga cctgttctat taccgaaagg ggctatccgc atattattgc
      961 cgattttaat ctcacgtcca tatttagcaa aggaaacaac ctttcctgca gcacctacat
     1021 caccaggaat tgcgcctaat ccgccagcaa catctctaac agaagctggt ctgcctgtcg
     1081 ttgcataact aaaaccatgc tgtgtccaca taccaatggc agcaccaccc aagatagcca
     1141 atggaagaaa agccccttca gtctccttca tctccttctg agaaagctcc gccaactgca
     1201 tcggcgcatc tgcccgcgtg tggaacactt ggtcttcaaa tgcctgattg tccaatccgt
     1261 ttgccattgc gggggcgatc atagacagca tcattacggc tgcggtgatt tgttttttca
     1321 taataactcc tttggattac aaggttggaa aatcaaaacc tgcttaaaat gtatgctgta
     1381 cgcccaattt cagttcggaa ctgctttgcc ctgaaacgtt gaaacgtgcg gatgcgttta
     1441 aagccgcggt tttggtgaaa ccgaaacctg cgccgaaatg ggcgtaggtg gatgtgtttc
     1501 ttgcggattc ttttttgccg tctatgcggt cgggctgttt gcccagccat tggatgcctc
     1561 cggtcaggct gattctgtcg ttggcggcaa atgagatgtt gggattcagc atccagtaat
     1621 tgcctgcttt gtatttgacg tcgtctgaaa gggttttgct gccgttgatg cggtaggcgg
     1681 cggtgaggga aaggacaatc ggatctatgg ctttgtaggt ggtggcgccg atgagccacg
     1741 attttcccga cgaggctttg ttgcgcgatt tttcgtaaac cgtgctttcg aggaaagcga
     1801 tgagtgcggg atttttgccg tctttgagga aggtgtggct gatgccggcg gatatgtcgg
     1861 acatccgttt gttgcgggtt ttgccgttgc cgtcgagttt gcgttcttcg tgccacagat
     1921 agctgccgct gccgtaaatg tcggtattgc cggtcagtcc gtagcgcaaa ccgagcgtgc
     1981 cggcgagcat atcggtattg ctgccgtttt cttgaatttc ggtcgggacg gggataaagg
     2041 aagcggagcc ggtctgaatg taaaccggtg cggcaagttc ggaacggctg ttttcgctgt
     2101 tcaggtaggt aagggaagtt tccagtttcc attttccctt gtcggtcatt atgtcttcga
     2161 tattcagcgg cagatcagtg cggacacata atggcacaaa gctaacaaat actaagagaa
     2221 tatttttcat gacattgttt tcttgattg
//
LOCUS       DAXGCP010000151         2106 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.152, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000151 DAXGCP010000000
VERSION     DAXGCP010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.152"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            68..1048
                     /locus_tag="ACFJCW_002142"
     CDS             68..1048
                     /locus_tag="ACFJCW_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC4152175.1"
                     /translation="MSARLMGMAFKTGIPRGQRFVLVKLCDCANDEGLCYPSQETLAE
                     DTGFAETAVRQHIKWLKDNNFIKSARRQRGRERKSDIYRINVALLEKCYAEAAKRKAA
                     RQAKMWEEPLDYEPSDYEPSDYEPSDFDAKNHQILSGEPSDFALRTVRFCAKNHQILS
                     GEPSDFDGSLYVEPSVEPSVEPSGSNARGARAPAGPHPAKPQTAPPETAPAAKAKKTG
                     RHAAELALLAAYGITGQAAADFLQVRKAKRQPLTETAMRLIAADAEKCGMTALQAAEY
                     AIASGWGSFRADWLQNKTFGRSGNRGGLTHNQTAAVPDAGSYGDMPTTDF"
     gene            1063..1845
                     /locus_tag="ACFJCW_002143"
     CDS             1063..1845
                     /locus_tag="ACFJCW_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HFC4152176.1"
                     /translation="MALRNASDFLGAYGGGVRVERRQCAEHGGYAAKSVLRGVWTGCP
                     ACRKLEAADEMAAYAETLRRGAMRDALEKRIGRSGIAPRFRNCRIENYAVSDSIPGMA
                     RAKAAAAEYAANFADVLQTGRSMIFSGRRGTGKNHLACGIAREVIAAGKSALVITVGD
                     MLRTVKDSFGGGGGEAGAVGIFVKPDLLVLDEFGAGSLSETDGRILFSVVNARYERLM
                     PMLVLTNLTAEAFRENTDARIRDRLRDGGGKLIPFDWESYRA"
     gene            1915..>2106
                     /locus_tag="ACFJCW_002144"
     CDS             1915..>2106
                     /locus_tag="ACFJCW_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152177.1"
                     /translation="MREGAECGRAGEALPANKPLRYRRVSDGIGGGSRKKDGGAWGIS
                     PRNAPDLSGKAGKTLWEYPS"
BASE COUNT          457 a          567 c          736 g          346 t
ORIGIN      
        1 gcatgaaggc gggcggccgc gggaagcctg ttacgcatta ttcgattgtc aaaaacggag
       61 cggaagtatg agtgcgaggc tgatggggat ggctttcaaa acgggtatcc cgagggggca
      121 gcgttttgtt ttggtaaagt tgtgcgactg cgccaacgac gagggcttgt gttatccgtc
      181 gcaagaaacg ctggcggaag atacgggctt cgccgaaacc gccgtacggc agcatatcaa
      241 gtggctgaag gataacaatt tcatcaagtc cgcccggcgg cagagggggc gggagaggaa
      301 gtccgacatc taccgcatca acgtcgccct gcttgaaaaa tgctatgcgg aggcggcaaa
      361 acggaaggcg gcgcggcagg caaaaatgtg ggaagaacca ttggattacg aaccgtcgga
      421 ttacgaaccg tcggattacg aaccgtcgga ttttgacgct aagaaccatc agattttgag
      481 cggcgaaccg tcggattttg cgctaagaac cgtcagattt tgcgctaaga accatcagat
      541 tttgagcggt gaaccatcag attttgacgg ttccttatat gtagaaccgt cagtagaacc
      601 gtcagtagaa ccgtcaggat caaatgcgcg cggcgcgcgc gcccctgccg gaccgcaccc
      661 tgcgaaaccg caaacggcgc ctcccgaaac cgcaccggcg gcgaaggcga aaaaaaccgg
      721 caggcacgcc gccgaacttg cgctgcttgc cgcctacggc atcacggggc aggcggcggc
      781 ggacttcctg caagtccgca aggcaaaacg gcagccgctg acggaaacgg caatgcgcct
      841 gattgccgcc gatgcggaga aatgcgggat gacggcgctg caggcggcgg agtacgccat
      901 cgccagcggc tggggcagct tccgcgccga ctggctgcaa aacaaaactt tcggcaggtc
      961 cggaaaccgc ggcggtctga cgcacaacca aaccgccgcc gtgccggatg cgggaagcta
     1021 cggcgatatg ccgacgacgg atttttgagg gggggttcgg atatggcttt gaggaacgcg
     1081 tctgatttct tgggggctta cggcggcggc gtgcgggtcg agcggaggca atgcgcggaa
     1141 cacggcggat acgcggcgaa aagcgttttg cgcggcgtgt ggacgggctg cccggcctgc
     1201 cggaagctgg aggcggcgga cgaaatggcg gcatacgcgg aaacgctgcg ccgcggggcg
     1261 atgcgcgacg cgctggaaaa acgcatcggg cgttcgggca tcgccccgcg gttcagaaac
     1321 tgccggattg aaaactacgc cgtcagcgat tcgatcccgg ggatggccag ggcgaaggcg
     1381 gccgccgccg agtatgcggc aaacttcgcc gatgtgttgc agacggggcg gagcatgatt
     1441 ttttcgggca ggaggggcac gggcaaaaac caccttgcct gcggcatcgc ccgcgaagtc
     1501 atcgccgccg gcaaaagcgc gctggtcatc acggtgggcg atatgctgcg gacggtcaag
     1561 gacagtttcg gcggcggcgg cggcgaggcg ggggcggtcg ggattttcgt gaagcccgat
     1621 ttgctggtgc tggacgagtt cggcgcgggc agtctgtcgg aaacggacgg gcggattttg
     1681 ttttccgtcg tcaacgcccg gtacgagcgg ctgatgccga tgctggtgct gaccaacctg
     1741 acggcggaag ccttccgcga aaacaccgac gcgcggatca gggacaggct gcgggacggc
     1801 ggcggcaagc tgattccgtt cgactgggag agctaccgtg cgtgaaacct gtttctattg
     1861 caaccatgcc gacttcaaaa ccaacaccgg cacgccggtg cgcggttttg cgaaatgcgc
     1921 gaaggcgcgg aatgcggaag agcgggcgaa gcattacccg cgaataaacc attgcgctac
     1981 cggcgcgttt cagacggcat cgggggcggc agtcgcaaaa aggacggcgg tgcttgggga
     2041 atatcccccc gcaatgcgcc ggatttgagc gggaaggcgg gtaaaacgct ttgggaatat
     2101 cccagc
//
LOCUS       DAXGCP010000152         2035 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.153, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000152 DAXGCP010000000
VERSION     DAXGCP010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2035
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.153"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            232..1155
                     /gene="lpxC"
                     /locus_tag="ACFJCW_002145"
     CDS             232..1155
                     /gene="lpxC"
                     /locus_tag="ACFJCW_002145"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HFC4152178.1"
                     /translation="MLQRTLAKSIGVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLNPYLINDTRLSSTIVTDKGLRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSPPTFEIDFAGKSYIGEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IGDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAVNNALLRAV
                     LADETAYEWVEFADSDDLPDAFHELNIRNCG"
     gene            1283..1699
                     /locus_tag="ACFJCW_002146"
                     /pseudo
     CDS             1283..1699
                     /locus_tag="ACFJCW_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575067.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            1822..1929
                     /locus_tag="ACFJCW_002147"
                     /pseudo
     CDS             1822..1929
                     /locus_tag="ACFJCW_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          517 a          572 c          495 g          451 t
ORIGIN      
        1 atgtatagtg aattaaattt aaaccagtac ggcgttgcct cgccttttcg tactatccgt
       61 actgcctgcg gcccgccgcc ttgtcctgat tttcgttaat ccgccataca ttttcatgcg
      121 gcttacgtgt tggaaacgga tacattggca aatactattg aaaaacatag cctgtttttc
      181 cggttttatc gtattattcc gaaacttacc ccattgataa ggaagcggtt tatgctgcaa
      241 agaactttgg cgaaatccat cggcgttacc ggagtcgggc tgcattcggg cgaacgcgtc
      301 gcgctgaccc tgcaccccgc gcctgaaaac agcgggattt ccttccgccg caccgatttg
      361 gacggcgaga tgggcgaaca aatcaagctg aacccttatt tgatcaacga tacccgcctt
      421 tcatccacca tcgttaccga caaaggcctg cgcgtcggca ccatcgaaca catcatgtcc
      481 gcactgtccg cctacggcat cgacaatgcg ctgattgagt tgaacgcgcc cgaaatcccg
      541 attatggacg gctccagcct gccgtttatt tacctcctgc aagatgcggg cgttgtagac
      601 caaaaggcgc aaaagcgttt tttgaaaatc ctcaaacccg tcgaaatcaa agaagcgggc
      661 aaatgggttc gatttacgcc gtatgacggt tttaaggtaa cgctgaccat cgaattcgac
      721 catcctgttt tcaaccgcag cccgcctacg tttgaaattg atttcgccgg caaatcctac
      781 atcggcgaaa tcgcgcgcgc gcgcactttc ggctttatgc acgaagtgga aatgatgcgc
      841 gcccacaatc tcggcttagg cggcaatttg aacaacgcca tcgtgattgg cgacacggat
      901 gtcctgaatc ctgaaggctt gcgctatccc gatgagtttg tgcgccacaa aatcctcgac
      961 gccatcggcg atttgtatat cgtcggacat ccgattgtcg gcgcgtttga aggctacaaa
     1021 tcgggacacg ccgtcaacaa cgcccttttg cgcgcagttt tggcagacga aacggcttac
     1081 gaatgggtgg aatttgccga cagcgatgat ttgcccgacg catttcacga gctgaacatc
     1141 agaaattgcg gataacgccc ccttttccaa acaaatgccg tcaaacagat gccgtcattc
     1201 ccgcgcgggc gggaatctag gacgtaaaat ctaaagaaac cgttttcccg ataagtttcc
     1261 gtgccgacag acccggattc ccgcccgcgc gcaagtttcc gaagccatcc ttttggccga
     1321 aggtcaaaaa tcagccgtta ccgagtatta cctgaatcac ggcatatggc cgaaagacaa
     1381 cgcttctgcc ggcgtggcat ccacccccac cgacatcaaa ggcaaatatg ttaaggaagt
     1441 taaagtcgaa aacggcgtcg tcaccgccca aatggcttca agcaacgtaa acaaagaaat
     1501 caaagacaaa aaactctccc tgtgggccaa gcgtcaagac ggttcggtaa aatggttctg
     1561 cggacagccg gttaagcgcg acgacaccgc cgccaaagcc ggcaccgacg ccgacgccgt
     1621 caccgccgac gccaacaacg ccatcgaaac caagcacctg ccgtcaacct gccgcgataa
     1681 ggcatctgat gccacctaag gcaaattagg ccttaaattt caaacaaatc aagcggtaag
     1741 tgattttcca cggccgcccg gatcaacccg ggcggcttgt cttttaaggg tttgcaaggc
     1801 gggcggggtc gtccgtttcg gtggaaataa tatacccgcg cgcaagtttc cgaagccatc
     1861 cttttggccg aaggtcaaaa atcagccgtt accaagtatt acctgaataa cggcgaatgg
     1921 ccggaaaact tcgtcattcc cgcgaaagcg ggaatctagg tctgtcggca cggaaactta
     1981 tcgggtaaaa aggtttctcc ggtcctgagt cctggattcc cactttcgtg ggaat
//
LOCUS       DAXGCP010000153         1787 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.154, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000153 DAXGCP010000000
VERSION     DAXGCP010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1787
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.154"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..819
                     /gene="mafA"
                     /locus_tag="ACFJCW_002148"
     CDS             <1..819
                     /gene="mafA"
                     /locus_tag="ACFJCW_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HFC4152179.1"
                     /translation="RAAVKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIR
                     GGYHNNPDSATRYSYPAYDTTATTKSDALSGVTTSTSLLNAPAAALTKNNGRKGERSA
                     GLSVNGTGDYRNETLLANPRDVSFLTNLIQTVFYLRGIEVVPPEYADTDVFVTVDVFG
                     TVRSRTELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTAAYESQYQEQYALWMGPY
                     SVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNPDVGNEVIRRRKGG"
     gene            823..>1787
                     /gene="mafB"
                     /locus_tag="ACFJCW_002149"
     CDS             823..>1787
                     /gene="mafB"
                     /locus_tag="ACFJCW_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HFC4152180.1"
                     /translation="MKPLRRLIKLLAACAVAAAALIQPALAADLAQDPFITDNTQRQH
                     YEPGGKYHLFGDPRGSVSDRTGKINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGNVDDGFTVYRLNWEGHEHHPADAYDGPKGGNYPKPTGA
                     RDEYTYNVNGTARSIKLNPTDTRDVRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRRGNSMEFVNGVAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AAIGGLGSAAGFEKNTREAVDRWIQENPNAAETVEAVFNVAAAAKV"
BASE COUNT          469 a          652 c          414 g          252 t
ORIGIN      
        1 cgcgccgccg tcaaagaaat ggacttgtcc gccctgaaag gacgcaaagc cgccctttac
       61 gtctccgtta tgggcgacca aggttcgggc aacataagcg gcggacgcta ctccatcgac
      121 gcactgatac gcggcggcta ccacaacaac cccgacagcg ccacccgata cagctacccc
      181 gcctatgaca ctaccgccac caccaaatcc gacgcgctct ccggcgtaac cacttccaca
      241 tcgcttttga acgcccccgc cgccgccctg acgaaaaaca acggacgcaa aggcgaacgc
      301 tccgccggac tgtccgtcaa cggcacgggc gactaccgca acgaaaccct gctcgccaac
      361 ccccgcgacg tttccttcct gaccaacctc atccaaaccg tcttctacct gcgcggcatc
      421 gaagtcgtac cgcccgaata cgccgacacc gacgtattcg taaccgtcga cgtattcggc
      481 accgtccgca gccgtaccga actgcacctc tacaacgccg aaacccttaa agcccaaacc
      541 aagctcgaat atttcgccgt cgaccgcgac agccggaaac tgctgattgc ccctaaaacc
      601 gccgcctacg aatcccaata ccaagaacaa tacgccctct ggatgggacc ttacagcgtc
      661 ggcaaaaccg tcaaagcctc agaccgcctg atggtcgatt tctccgacat caccccctac
      721 ggcgacacaa ccgcccaaaa ccgtcccgac ttcaaacaaa acaacggtaa aaaccccgat
      781 gtcggcaacg aagtcatccg ccgccgcaaa ggaggataaa ccgtgaaacc gctgcgcaga
      841 ctcatcaagc tccttgccgc ctgtgccgta gcggcggccg cactcataca gcccgccctc
      901 gcggcggact tggcgcaaga cccgttcatt accgataaca cccaacggca gcactacgaa
      961 cccggcggca aataccacct cttcggcgac ccgcgcggca gcgtttccga ccgcaccggc
     1021 aaaatcaacg tcatccaaga ctatacccac cagatgggca acctgcttat ccaacaggca
     1081 aacatcaacg gcacaatcgg ctaccacacc cgcttttccg gacacggaca cgaagaacac
     1141 gcccccttcg acaaccacgc cgccgacagc gcaagcgaag aaaaaggcaa cgttgacgac
     1201 ggctttaccg tgtaccggct caactgggaa ggacacgaac atcatcccgc cgatgcctac
     1261 gacggcccga agggcggcaa ttaccccaaa cctacgggcg cacgagacga atacacctat
     1321 aacgttaacg gcacagcccg cagcatcaaa ctcaatccga ccgacacccg cgacgtcaga
     1381 caacgcatat ccgacaatta cagcaacctc ggcagcaatt tctccgaccg cgccgatgaa
     1441 gccaacagaa aaatgttcga gcacaatgcc aagctcgacc gccggggcaa cagcatggag
     1501 tttgtcaacg gcgtcgccgc cggcgcgctc aaccccttta tcagcgcggg cgaagccttg
     1561 ggcataggcg acatactgta cggaacgcgc tatgccatag acaaagccgc aatgcgcaac
     1621 atcgccccct tacccgccga gggcaaattc gccgccatcg gcggcttggg cagcgcggcg
     1681 ggctttgaaa aaaatacgcg cgaagccgtt gaccggtgga tacaggaaaa ccccaatgcc
     1741 gccgaaaccg tcgaagccgt cttcaacgtt gccgccgccg ccaaagt
//
LOCUS       DAXGCP010000154         1739 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.155, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000154 DAXGCP010000000
VERSION     DAXGCP010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.155"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..269
                     /locus_tag="ACFJCW_002150"
                     /pseudo
     CDS             1..269
                     /locus_tag="ACFJCW_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360925.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            382..951
                     /gene="rsmD"
                     /locus_tag="ACFJCW_002151"
     CDS             382..951
                     /gene="rsmD"
                     /locus_tag="ACFJCW_002151"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HFC4152181.1"
                     /translation="MAAGKHTKHSNRVRIIGGQCRGRKLSFASADGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGMEAASRNAKRVVIADNNRQTVQTLEKNSRELGLG
                     QVQTVCSDGIAYLANLKEKFDVVFLDPPFAWQSWESLFNVLGTRLNDGAYVYIEAGRQ
                     PDKPDWLTGYREGKSGQGTFELRVFQVAE"
     gene            1074..1325
                     /locus_tag="ACFJCW_002152"
     CDS             1074..1325
                     /locus_tag="ACFJCW_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HFC4152182.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            1422..1505
                     /locus_tag="ACFJCW_002153"
     tRNA            1422..1505
                     /locus_tag="ACFJCW_002153"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1456..1458,aa:Tyr,seq:gta)
     gene            1536..1609
                     /locus_tag="ACFJCW_002154"
     tRNA            1536..1609
                     /locus_tag="ACFJCW_002154"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1568..1570,aa:Gly,seq:tcc)
     gene            1619..1693
                     /locus_tag="ACFJCW_002155"
     tRNA            1619..1693
                     /locus_tag="ACFJCW_002155"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1651..1653,aa:Thr,seq:ggt)
BASE COUNT          483 a          383 c          456 g          417 t
ORIGIN      
        1 cattgccgat acaccgtaac cctaaaaccc gccattcccg cgcaggcggg aatccggatt
       61 tgtcgggatt cgctcaaatc gggcggcggc gggatggtgt tgcagattaa cgatgtggat
      121 accaacagcg gggaatttgc aatctatacc gctcaggatg catcggtaaa gctggatttg
      181 ttaaaaatgg aattgaaaca ctgcaaagaa atgttggaac aaaagacaaa gaaatcgagt
      241 tgctccgcaa gctgaccgaa accgtttaaa cagatatgcc gtctgaaaaa agttttcagg
      301 cggcatattc tttgacaggt cttgtataat accgtttgaa cttacaggtt tttgattatg
      361 gcggcaggca ggtttttgat tatggcggca ggcaaacata ccaaacacag caaccgggta
      421 cgcattatcg gcgggcaatg ccggggcagg aaattgagtt ttgcatccgc cgacggactg
      481 cgtccgacac ccgacagcgt gcgtgaaaag ctgtttaact ggctgggaca ggatttgacg
      541 ggtaaaacgg ttttggatct cttcggaggc agcggcgcac tcggcatgga ggcggcatcg
      601 cgtaatgcaa aacgggtcgt gattgcagac aacaaccgtc aaacggtgca aacccttgag
      661 aaaaacagcc gcgaactggg tttggggcag gtgcaaaccg tctgttcgga cggcattgcc
      721 tatttggcaa acctaaaaga gaaattcgat gtcgtcttcc ttgatccgcc gtttgcgtgg
      781 caaagttggg aaagtctttt caatgtattg ggcacacgcc tgaatgacgg cgcatatgtt
      841 tatatcgagg caggcaggca gccggacaaa cctgattggc tgacgggata tagggagggg
      901 aagtcggggc agggtacatt tgaattaagg gttttccaag tggctgaata atatgcgctt
      961 tgataatcat ttccgggttg taaacattcg tttgcaaccg tccggttcaa aaaaaccttg
     1021 tgctataatc cgcgcccgcc cggttttgat aatttagtgg aaaaggaaaa gaaatgtcgc
     1081 tttttattac cgacgagtgc atcaactgcg acgtatgcga acccgaatgc cccaatgatg
     1141 ccatttccca aggcgaggaa atttacgaaa tcaaccccaa cctctgcacg cagtgcgtcg
     1201 gacactacga tgagccgcag tgccagcagg tttgcccggt ggactgcatc ctgattgacg
     1261 aagaacatcc cgaaacccat gacgagttga tggcgaaata cgaaaagatt atccagttta
     1321 aataaattct ttttaaaaca tcaaattatg tctgttttga aataaaatca aaaaaaaact
     1381 tgacggaaaa gcaagccgct aataaactag tgttctcttt tggagggatt cccgagcggt
     1441 caaagggggc agactgtaaa tctgttgcga aagcttcgaa ggttcgaatc cttctccctc
     1501 caccaaaatt cttacttggg gcagtagcga gtaatgcggg tgtagctcaa tggtagagca
     1561 gaagccttcc aagcttacgg tgagggttcg attcccttca cccgctccaa acaattaggc
     1621 ccatgtagct caggggtaga gcactccctt ggtaagggag aggtcggcag ttcaaatctg
     1681 cccatgggca ccatctctcg attattcatt tctttaaggc ttagatatat aggatattg
//
LOCUS       DAXGCP010000155         1738 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.156, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000155 DAXGCP010000000
VERSION     DAXGCP010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1738)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1738)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1738
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.156"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            180..959
                     /locus_tag="ACFJCW_002156"
     CDS             180..959
                     /locus_tag="ACFJCW_002156"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HFC4152183.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALSEHPLVGEYGHSFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPES
                     TRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
     gene            1168..>1738
                     /locus_tag="ACFJCW_002157"
     CDS             1168..>1738
                     /locus_tag="ACFJCW_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC4152184.1"
                     /translation="MAAHNKLTQKQIEAAKADGKQSKLADGGGLYLLLHPNGSKYWRM
                     RYRHGGCEKTLALGVYPAVSLKQARELARAARAQTAAGIDPVAERRRTRPGSGRSLPE
                     IARAWYGSRQGQRADNTLEGDRRSLAYLTDYYKNNTDINDITTACVSKFIEHLNRINI
                     PACARRTVQILAQIWDYAVQRGIITDERRN"
BASE COUNT          504 a          566 c          358 g          310 t
ORIGIN      
        1 tttgtaaaac tgtccatact cattaccgcc tagtcggtaa tgcatttttt agtagtattt
       61 gaaaaagtat gatgataaaa acggttaagc ctaacttttt cataaaatcc agcagagtaa
      121 ggcagaaaaa aacacccaaa ttggctataa tcccgacaaa cacactcaag gacaacaaca
      181 tggcagcctc gcccgaagca aaattcaccg aagaaaagat tttgtgggtc aaacaccaca
      241 cgccgaaact catcactttc gccatcagcc gtcccgaatc ctaccgtttt aaagccggac
      301 agttctcccg actcggtttc tacgaaggta aaggctttat ttggcgtgcc tattccgtcg
      361 tttccgcaga atatgccgac acgctcgaat attttgccgt actcatccaa gacggcccca
      421 tgtcggccct tttcgccaaa atgcaacagg gcgacaccat cctgctcgat aaaaatgcca
      481 ctggctttct cctgcccgaa cgcttccccg acggcaagga tttggtgatg ctctgtaccg
      541 gctcgggcat cgcccccttc ctttccattc tcgaacaacc cgaaatccgg cagcgtttcg
      601 ataccgtcaa cctgatacat tccgtatctt ttcccgaaga attgattttc aacgaccggc
      661 tggccgcatt gtccgaacat cccctggtag gcgaatacgg acactcgttc cgtttcgtcc
      721 ctgttaccac ccgtgccgcc aacccctcgg gcttaagcgg aaaacgcatt ccggaactct
      781 taaaaaacaa cagcatcgaa caggcgctgc ataccaagct taccccggaa tccacacggt
      841 ttatgatttg cggtaacccg gaaatggtca aagacacttt ccaaacgctg ctcgatatgg
      901 gttacgccat gcaccgcaac cgcattcccg gtcaaatcat gatggaaaac ggcttctaaa
      961 aacgaacgct cccaacccct acccacgccc acacacaaaa caaaataaaa aacagcgata
     1021 tacaaaaacc aatttgcaaa aacagacctc acgcctatac tgccactcac agcaagcaac
     1081 acaaaaaagc gggtacaaat tagggtacaa aacacaagcc cgaacacaga agcaccccaa
     1141 ccaaacccaa aggcaaaggc aaacaaaatg gcggcacaca acaaactgac ccaaaaacaa
     1201 atagaagcag ccaaggcaga cggcaaacaa agcaagctgg ccgacggcgg cggcttatat
     1261 ctgctgctgc accccaacgg cagcaaatac tggcggatgc gctaccggca cggcggatgc
     1321 gaaaaaaccc tagccttggg cgtatatccc gccgtcagcc tcaagcaggc ccgcgaactt
     1381 gcccgcgccg cccgggcgca gaccgccgcc ggcatcgacc ccgtcgccga acgccgccgc
     1441 acccgtcccg gcagcgggcg cagccttccc gaaatcgccc gcgcgtggta cggcagccgt
     1501 caagggcaac gtgccgacaa cacactggaa ggcgaccgcc gttcactcgc ctacctgacc
     1561 gactactaca aaaacaacac cgacatcaac gacatcacca ccgcctgcgt atcaaaattt
     1621 atcgaacacc tcaaccgcat caacatcccc gcctgcgccc ggcgcaccgt ccaaatcctc
     1681 gcccaaatat gggactatgc cgtccagcgc ggcatcatta ccgacgaacg gcgcaacc
//
LOCUS       DAXGCP010000156         1713 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.157, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000156 DAXGCP010000000
VERSION     DAXGCP010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1713)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1713)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1713
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.157"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1311
                     /gene="mafB"
                     /locus_tag="ACFJCW_002158"
     CDS             <1..1311
                     /gene="mafB"
                     /locus_tag="ACFJCW_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC4152185.1"
                     /translation="FEGIIGYETHFSGHGHEVHSPFDNHDSRSTSDFSGGVDGGFTVY
                     QLHRTGSEIHPEDGYDGPQGSDYPPPGGARDIYSYYVKGTSTKTKINTVPQAPFSDRW
                     LKENAGAASGFFSRADEAGKLIWENNPNQNWWGNRMDDVRGIVQGAVNPFLTGFQGLG
                     VGAITDSAVNPVTYAAARKTLQGIHNLGNLSPEAQLAAASLLQDSAFAVKDGINSARQ
                     WADAHPNITATAQTALAVAEAAGTVWGGKKVELNPTKWDWVKNTGYETTVTRKTLDGQ
                     IAGKNKPIKPSSGDYVLPVGRQIIDPTRTSFSQATVSYQKRGANYNYDSLVAAMNEKK
                     SWVGDRVDVVNMPDGAPTSMDNTRIMAAREAGVKVEANVHNFNDRLSSKERIRFKHDG
                     IEPQTWGEAIQLRIRKQETQKGVPEGWSKRFPNGSIYDVKVLRK"
     gene            1308..1679
                     /locus_tag="ACFJCW_002159"
     CDS             1308..1679
                     /locus_tag="ACFJCW_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HFC4152186.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
BASE COUNT          547 a          330 c          395 g          441 t
ORIGIN      
        1 tttgaaggca ttatcggtta tgaaacccat ttttcagggc acggacacga agtacacagt
       61 ccgttcgata atcatgattc aagaagcact tctgatttca gcggcggtgt agacggtggt
      121 tttaccgttt accaacttca tcggacaggg tcggaaatcc atccggagga tggatatgac
      181 gggccgcaag gcagcgatta tccgcccccc ggaggagcaa gggatatata cagctactat
      241 gtcaaaggaa cttctacaaa aacaaagata aacactgttc cgcaagcccc tttttcagac
      301 cgctggctaa aagaaaatgc cggtgccgct tccggttttt tcagccgtgc tgatgaagca
      361 ggaaaactga tatgggaaaa caaccccaat caaaattggt ggggtaaccg tatggatgat
      421 gttcgcggca tcgtccaagg tgcggttaat ccttttttaa cgggttttca gggattggga
      481 gttggggcaa ttacagacag tgcggtaaac ccggtaacct atgcggcagc acggaaaact
      541 ttacagggta ttcacaattt aggaaattta agtccggaag cacaacttgc cgccgcgagc
      601 ctattacagg acagtgcctt tgcggtaaaa gacggcatca attccgccag acaatgggct
      661 gatgcccatc cgaacattac agctactgcc caaactgccc ttgccgtagc agaggccgca
      721 ggtacggttt ggggaggtaa aaaagtagaa cttaacccga ccaaatggga ttgggttaaa
      781 aataccggct atgaaacaac tgttacccga aagactttag atgggcaaat agctggcaag
      841 aacaagccta ttaaaccttc ttcaggagat tatgtcttgc cggtaggcag acaaatcata
      901 gatcctactc gtacatcttt ttcacaagct acagttagct atcagaagcg tggtgcaaat
      961 tacaactatg attctcttgt agctgcaatg aacgaaaaaa aatcatgggt tggcgacagg
     1021 gttgatgttg ttaatatgcc tgatggagca cctactagta tggataacac gcgtattatg
     1081 gcagcacgtg aagcaggggt aaaagtggaa gcgaatgttc ataattttaa tgaccgatta
     1141 tcatcaaaag agagaatcag gtttaagcat gatggtattg agcctcaaac ttggggagaa
     1201 gctatccagc tacgaattag aaagcaagaa acacaaaaag gagttccaga agggtggagc
     1261 aaaagatttc ctaacggaag tatttatgat gtaaaggtac ttaggaaatg ataaaacaaa
     1321 atagttttgt tccgtatcct gaagcaatgc ttcctaaagg atttaaatat ccgcaaagtt
     1381 atttaaaatt agctcaatcc actcatgcca ttaactacga tgaacaatat tcttttcctt
     1441 ggtggtttga aaatgcagaa agcaatatat cagaagtaat tgacatttat tttgaaataa
     1501 ctggcattcc aaacctatta ccttttgcta gaaaccaaga gtgggctgcc tgttttgata
     1561 tttcagataa atcaggtaat cctaaaatta tagtagttaa tttagataat acaaaatatt
     1621 acgagacttt tgaaaatttt gatacttggc taaaagaagc tgaaaatgat ggttggtagc
     1681 agccgtaggt cggattctcg aatccgacat ttt
//
LOCUS       DAXGCP010000157         1703 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.158, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000157 DAXGCP010000000
VERSION     DAXGCP010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1703)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1703)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1703
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.158"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(94..282)
                     /locus_tag="ACFJCW_002160"
     CDS             complement(94..282)
                     /locus_tag="ACFJCW_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152187.1"
                     /translation="MADGRKGFFDAIIKINIFFFPVKTPTLGAANPIAGGSTRFRFGA
                     EQMAVLYVPFCVLKHIGR"
     gene            523..1557
                     /gene="purM"
                     /locus_tag="ACFJCW_002161"
     CDS             523..1557
                     /gene="purM"
                     /locus_tag="ACFJCW_002161"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HFC4152188.1"
                     /translation="MSTSLSYRDAGVGIDAGDQLVEKIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYQNPVLVSGTDGVGTKLKLAFDWDKHDTVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGLSVGAGDMVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPKNTVAQIDAESWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVRSFLSGQGETVYRLGCIRER
                     QGNEHQTQVA"
BASE COUNT          445 a          401 c          438 g          419 t
ORIGIN      
        1 accaataaaa atatataaat catattgtta atgattattg ggacaattcg gtggcacaaa
       61 atataagctg tctgcttttc agcgggcggc tttttatctg cctatgtgtt tcaacacaca
      121 aaacggcaca taaagcaccg ccatttgttc cgcaccgaat cggaagcggg tgcttccgcc
      181 cgcaatcgga ttcgccgccc ctaatgtcgg ggttttaacc ggaaagaaga aaatattgat
      241 tttgatgatg gcatcaaaaa aacccttccg cccgtctgcc aaaaggaatg gttaagaaaa
      301 gcaatgcgtc ttttgatgga acgcgatata taagaaattg aggggaaggg caggcgggtt
      361 tctgcccgtt aatcctgcgg acggccccgc caaacccgac acgcgcgggc atatggcgga
      421 ttgtttacaa tattgtctaa aaatctgaac ctgcaaacgc gaaataaggt agaatacgcc
      481 ccgttatttt accgtccaat ccccatttac caaggaaaaa cgatgagtac ttcattgagt
      541 taccgcgatg cgggcgtcgg tatcgacgca ggcgaccaac tggtcgaaaa aatcaaaccg
      601 tttgccaaac gcaccatgcg tccggaagta ttgggggatt tgggcggttt tggcgcattg
      661 gtcgaaatcg gcaaaaaata tcaaaacccc gtattggtca gcggtacgga cggcgtgggt
      721 accaagctca aacttgcctt cgattgggac aaacacgata cggtgggcat cgaccttgtt
      781 gcaatgagtg tcaacgatat tttggttcaa ggagctgaac cattgttttt cttggattat
      841 tttgcctgcg gtaaattgga tgttccgcgt gcgaccgatg tcatcaaagg cattgcccaa
      901 ggttgcgaag aatccggctg cgccctgatt ggcggggaaa ctgccgaaat gccgggtatg
      961 tatcccgttg gtgaatacga tttggcgggt tttgccgtcg gcgtggtgga aaaagagaat
     1021 gtcattaccg gcctcagcgt cggcgcgggc gatatggtat tgggtttggc ttccaacggc
     1081 gcacattcaa acggctattc ccttatccgt aaaatcatcg aacgcgacaa tcccgatctg
     1141 gatgccgagt ttgataatgg caaaacttta cgtgaagccg ttattgcgcc gacacgtctg
     1201 tatgtgaaac cgattcttgc cgctttggaa aaatttacca ttaaaggtat ggcgcacatt
     1261 accggcggcg gcattaccga aaacgtgccg cgcgtgttgc ctaaaaacac ggttgcccaa
     1321 atcgatgccg aatcgtggga attgcccaag ctcttccaat ggcttcaaaa ggcgggcaat
     1381 gtggaaaccc aagaaatgta ccggaccttt aactgcggca tcggtatggt cgtcatcgtt
     1441 gctgccgaag atgccgatgc ggttcggtca ttcctgagcg ggcagggcga gacagtgtac
     1501 cgtttgggtt gcatccgaga gcgtcaaggg aacgagcatc aaacccaagt tgcctgactt
     1561 ccaagcatca aatgccgtct gaatttgttt cagacggcat ttccgcatct tccaaacgcg
     1621 tatccgcaac acagttctgc aaactgatat tttgcccggt atggcggctt aaacttcttc
     1681 atcatatttc gataatgcta taa
//
LOCUS       DAXGCP010000158         1645 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.159, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000158 DAXGCP010000000
VERSION     DAXGCP010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.159"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..289)
                     /locus_tag="ACFJCW_002162"
     CDS             complement(<1..289)
                     /locus_tag="ACFJCW_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HFC4152189.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMVDWAYENIQSETVVEITENQI
                     IEYQNRGLWGLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPL"
     gene            complement(286..1134)
                     /gene="mafB"
                     /locus_tag="ACFJCW_002163"
                     /pseudo
     CDS             complement(286..1134)
                     /gene="mafB"
                     /locus_tag="ACFJCW_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(1239..1454)
                     /locus_tag="ACFJCW_002164"
     CDS             complement(1239..1454)
                     /locus_tag="ACFJCW_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152190.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNPQLVQELEQHLIEAYNLMDTSN"
     gene            complement(1462..>1645)
                     /locus_tag="ACFJCW_002165"
     CDS             complement(1462..>1645)
                     /locus_tag="ACFJCW_002165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152191.1"
                     /translation="FDTFKLITIFFLGIRRLQSKHIRAIWDDKSGAIVIRDPNSKDGG
                     TAFRPTLGKTYFDKQK"
BASE COUNT          449 a          338 c          281 g          577 t
ORIGIN      
        1 ctaagggctc tgtagaaaaa tctgaatttt gtaatttttc ttttacagcc aaaatacttt
       61 ccttatctat tagccaatcc ccctcacttg gtccaaataa ccaattatcg gtaatttcag
      121 aaacaagccc ccataatcca cgattttgat attcaataat ttgattttcc gtaatttcta
      181 caactgtttc agattgaatg ttttcataag cccaatcaac catttcagta tattcactaa
      241 ttgaaacatt gtcttttaaa cagaaaatta acaggttgtg ttcattcatt tgtctaagtt
      301 cctgatatga gtttgttgtt gtaaataatc ttttgcttgc ttaccttgta aattaccggt
      361 tttcacagca ttaccatttg aatcaagata ctgttttcgt gaattatcat ggattctaaa
      421 atagttgttt tcgttatctt ttataattgt aatttttcca tctaaactag tgtatcgagt
      481 tttaacttta tcaggactta aaataccagg tgcattggga gttagtgttt tgtgcactga
      541 atcaaaactt gctgaactcc agttactatt aaacttctca aaattttgtt ttcttttttc
      601 agcggcgctg tttggtaaag atttaatagg tttattccca cctgccatct ccccatctaa
      661 agtctgcata tggcgggcag caggtttttt atagccggta tttttaaccc aatcccattt
      721 ggtcgggtta agttctactt ttttacctct ccaaaccgta gttgcggctt ctgctacgga
      781 aagggcagtt tgggctgttg cagttatatt cggatgggca tcagcccatt gtctggcgga
      841 attgatgccg tcttttaccg caaaggcact gtcctgtaat aggctcgcgg cagcaagttg
      901 tgcttccgga cttaaatttc ctaaattgtg aataccctgt aaagttttcc gtgctgccgc
      961 ataggttacc gggtttaccg cactgtctgt aattgcccca actcccaatc cctgaaaacc
     1021 cgttaaaaaa ggattaaccg caccttggac gatgccgcga atatcatcca tacggttagc
     1081 ccaccaattt ttatcggggt cgttttccca tatcagtttt cctgcttcat ccgcacagtt
     1141 agggttggca ttgatgccca cccagtttca gacagcctga aaaggatttt taagatacgg
     1201 ctaggtgggc tgcgagaacc cacactctgc ataaccattt agttagatgt atccattaga
     1261 ttatatgctt caattaaatg ttgttctagc tcttgcacta attgaggatt gcgaattcct
     1321 gacacaatct caaattcttc tgcatctatg caaacacctg cataaatttc aataacaagg
     1381 gaacgcaata attgaagctc ttctcttgtt aaagaaataa taatgtcatc acctgtgtaa
     1441 ttgattatat tcataataat tttatttttg cttgtcaaag taagttttac ctaaggttgg
     1501 tctaaatgca gtcccaccat cttttgaatt tgggtctcta attacaattg ctccagactt
     1561 atcatcccaa attgctctta tgtgtttgga ttgtaatctt cgaattccca agaaaaaaat
     1621 cgtaataagt ttgaaagtgt caaat
//
LOCUS       DAXGCP010000159         1611 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.160, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000159 DAXGCP010000000
VERSION     DAXGCP010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1611)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1611)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.160"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            168..707
                     /locus_tag="ACFJCW_002166"
     CDS             168..707
                     /locus_tag="ACFJCW_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Panacea domain-containing protein"
                     /protein_id="HFC4152192.1"
                     /translation="MLNAYDVADFFLSPFEEEDGEQISNLKLQKLLYYAQGYALAILN
                     RPLFAENIEHWQHGPVVPCIYRTYKKYGGSPLPAAHIEPDKYADEELVVLNRVRKEQG
                     CYTAWALRNKTHQEAPWIQTRQGEVIGIALMGEYFRHALPQTDYNFNLEKLKTAVEDS
                     FVSVPHFNGADDLEKWLEQ"
     gene            708..1067
                     /locus_tag="ACFJCW_002167"
     CDS             708..1067
                     /locus_tag="ACFJCW_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152193.1"
                     /translation="MQVLLGEDFKRALKNYPKEDRRKIAEFIAHVQQNGLSGLPGRNK
                     SSDNVPADDPQWLEKVRFAQRHNLWHYHIGIPKYNGGRYGDLTSAYILHYTLCDGFIK
                     IIGFDRHPPFILPDIPK"
     gene            complement(1084..1302)
                     /locus_tag="ACFJCW_002168"
     CDS             complement(1084..1302)
                     /locus_tag="ACFJCW_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152194.1"
                     /translation="MANSNSGHSKKLRAATAAAATKAKLASGEYRQFSVQGRAEDVEL
                     ILAAVEKAGGSRVQALAKICRRYLEGLS"
BASE COUNT          436 a          435 c          355 g          385 t
ORIGIN      
        1 tggattgatg ccgtctgaaa cggcagggca agtatttttc aaatatatcc gcccgatatg
       61 ccgacggcgc ggacagcctg ccgataccgg ataatttgca caaattattt cttgaaataa
      121 tgggccggcg gccttaatat acagaaaaat aacaacggaa acagaaaatg ctgaacgcgt
      181 acgacgtggc agatttcttc ctttcccctt ttgaagaaga ggacggggag caaatctcca
      241 atctcaaact tcaaaaactc ctgtattacg cacaaggcta cgcccttgcc atacttaacc
      301 gccccctgtt tgccgaaaat atcgaacact ggcagcacgg tccggtagtc ccctgcattt
      361 accgcaccta caaaaaatac ggcggcagcc cattgcctgc ggcccatatc gaaccggaca
      421 aatatgcgga cgaagagttg gttgtcctca accgtgtccg taaagagcag ggctgctaca
      481 ccgcttgggc attacgcaat aaaacccatc aggaagcgcc gtggatacag acccggcagg
      541 gcgaagtcat agggattgcg ctgatggggg aatatttccg ccatgcgctg ccgcagacgg
      601 attacaattt caatcttgaa aaactcaaaa cagccgttga agacagcttt gtcagcgtcc
      661 cgcatttcaa cggcgccgac gacttggaaa aatggttgga gcagtaaatg caggtgctgc
      721 ttggcgaaga cttcaaaaga gcgttgaaaa actaccccaa agaagaccgc agaaaaattg
      781 cggaatttat cgcacacgtc caacagaacg gcttatcagg gttacccggc aggaacaaat
      841 ccagcgacaa cgtaccggca gacgatcctc aatggctgga aaaagtccga tttgcccaac
      901 ggcacaacct ttggcactat cacatcggca ttcccaaata caacggcggc aggtatggcg
      961 atttgacatc cgcctatatc cttcactata ccctttgcga cggctttatc aaaatcatcg
     1021 gttttgacag acacccgcct tttatcctgc ccgatattcc caaataacct tgtcttaccc
     1081 cccttaagac agcccctcga gataccgcct gcaaatcttt gccaaagcct gtacgcggct
     1141 gcccccggct ttttccacgg cggcaaggat aagctccacg tcttcggcac gcccctgcac
     1201 tgaaaactgc cggtattcgc cgcttgccag ttttgccttt gtcgccgccg ccgccgttgc
     1261 cgcgcgcaat tttttagaat gcccgctgtt ggaatttgcc atttttaaat ccttatagta
     1321 gagtatggga aagataagag gaagggcagc ctccttaact gccctgcaaa tggttaatcg
     1381 ttaatcactt gttttgtatt tccctaccac gctggggagc ttgcaaggaa atacaaaatc
     1441 acacagatta ggattttctt aatcacattg cctcctttct ctttcaggtt gccccgtatc
     1501 ggctgatacg gggtttcttc atttcctaat ctatgagttt attatatcat atgatataat
     1561 aaactcaagt atcgaaatac cctacacgcg cagagggcat tctttcctaa a
//
LOCUS       DAXGCP010000160         1608 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.161, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000160 DAXGCP010000000
VERSION     DAXGCP010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1608
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.161"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1275
                     /gene="mafB"
                     /locus_tag="ACFJCW_002169"
     CDS             <1..1275
                     /gene="mafB"
                     /locus_tag="ACFJCW_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HFC4152195.1"
                     /translation="FEGVIGYETHFSGHGHEVHSPFDNHDSRSTSDFSGGVDGGFTVY
                     QLHRTGSEIHPADGYDGPQGGGYPEPQGARDIYSYHIKGTSTKTKINTVPQAPFSDRW
                     LKENAGAASGFLSRADEAGKLIWENDPDKNWRANRMDDIRGIVQGAVNPFLMGFQGVG
                     IGAITDSAVSPVTYAAARKTLQGIHNLGNLSPEAQLAAASLLQDSAFAVKDGINSARQ
                     WADAHPNITATAQTALAVAEAAGTVWRGKKVELNPAKWDWVKNTGYKKPAARHMQTVD
                     GEMAGKNKPPKPSTQQHSTHSDNNIGLPAPYVKPDTSISPTGTIQDRIRWTKSKFPTE
                     KSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQTEHRRVRYDINNNIYV
                     LANPKTFKIKTMFKPNLGKEYYDGEFKKDMGN"
     gene            1241..1447
                     /locus_tag="ACFJCW_002170"
     CDS             1241..1447
                     /locus_tag="ACFJCW_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPCC family cysteine-rich protein"
                     /protein_id="HFC4152196.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
BASE COUNT          541 a          334 c          358 g          375 t
ORIGIN      
        1 tttgaaggtg ttatcggcta tgaaacccat ttttcagggc acggacacga agtacacagt
       61 ccgttcgata atcatgattc aagaagcact tctgatttca gcggcggcgt agacggcggt
      121 tttaccgttt accaacttca tcggacaggg tcggaaatac atcccgcaga cggatatgac
      181 gggcctcaag gcggcggtta tccggaacca caaggggcaa gggatatata cagctaccat
      241 atcaaaggaa cttcaaccaa aacaaagata aacactgttc cgcaagcccc tttttcagac
      301 cgctggctaa aagaaaatgc cggtgccgct tccggttttc tcagccgtgc ggatgaagca
      361 ggaaaactga tatgggaaaa cgaccccgat aaaaattggc gggctaaccg tatggatgat
      421 attcgcggca tcgtccaagg tgcggttaat ccttttttaa tgggttttca aggagtaggg
      481 attggggcaa ttacagacag tgcggtaagc ccggtaacct atgcggcagc acggaaaact
      541 ttacagggta ttcacaattt aggaaattta agtccggaag cacaacttgc cgccgcgagc
      601 ctattacagg acagtgcctt tgcggtaaaa gacggcatca attccgccag acaatgggct
      661 gatgcccatc cgaatataac agcaacagcc caaactgccc ttgccgtagc agaggccgca
      721 ggtacggttt ggcgcggtaa aaaagtagaa cttaacccgg ccaaatggga ttgggttaaa
      781 aataccggct ataaaaaacc tgctgcccgc catatgcaga ctgtagacgg ggaaatggcc
      841 gggaaaaata agccaccgaa accaagtacg cagcaacact ctacacactc tgataacaat
      901 atcggcttac ctgccccata tgttaaacct gatacatcta tttctccgac aggaacaatt
      961 caagaccgca tcagatggac aaaatccaag tttcctactg agaaatcttt aaatggacat
     1021 ttcaaagctc atggaaaaga atttggcgat ataaccattg aagactacca aaaaatggcg
     1081 tctgatttgt tatcaaaaca gacatcggac aagatattag gttatcagac ggaacataga
     1141 cgagtgcgct atgatatcaa taacaatatc tatgttttgg ccaatccaaa aacattcaaa
     1201 atcaaaacaa tgtttaaacc aaacttagga aaggagtatt atgatggaga attcaaaaaa
     1261 gacatgggaa attgacggag aaatatggct acattgtcct gtttgcggaa ctgaagttat
     1321 ggactatgat atctgtgacg tttgtcagtg gcaaaataca ggagaaacta atatagatgg
     1381 tggtcctaat gaaatgacac ttgcggaggc gaaagaagct tacgcaaaag gcttaccaat
     1441 cagataaata agcacctaga gaaaccaatg atgacggaat cccatggtta cccatcaaat
     1501 aatttacctg ttaaaatcat aaatgatatt atttatgcaa cccagttagt cgaagatttg
     1561 gttttaggaa aaataaaaat tgttgatttt ttaaaatcat ataacaat
//
LOCUS       DAXGCP010000161         1606 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.162, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000161 DAXGCP010000000
VERSION     DAXGCP010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.162"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..263)
                     /locus_tag="ACFJCW_002171"
     CDS             complement(<1..263)
                     /locus_tag="ACFJCW_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02594 family protein"
                     /protein_id="HFC4152197.1"
                     /translation="MKELKWIEEARKYLGAHEKVNGKSNPVLLAMLQEMGNFNQEQKA
                     WWKETDTPWCGLFVGHCLGKAGRAVIRDWYRAKAWSMSGLTKL"
     gene            complement(305..430)
                     /locus_tag="ACFJCW_002172"
     CDS             complement(305..430)
                     /locus_tag="ACFJCW_002172"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152198.1"
                     /translation="MPPETDFAKRRRVTGVEMETERVKPDVSVLRKPAIKGLAGV"
     gene            470..706
                     /locus_tag="ACFJCW_002173"
     CDS             470..706
                     /locus_tag="ACFJCW_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HFC4152199.1"
                     /translation="MLRLQKWGNSAAVRLPARLLTALNAKIGDALETEIRNGELLIRP
                     VKRYRLSDLLAETEAAPPRAEGWEEMPDVGQEGV"
     gene            706..1053
                     /locus_tag="ACFJCW_002174"
     CDS             706..1053
                     /locus_tag="ACFJCW_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HFC4152200.1"
                     /translation="MYIPERGDIFHLAFDPAAGTEMKGGHYAIALSPRAYNRATGLVY
                     ACPISQGRAAAARSGGMISTLLGAGTATQGNVHCHRMKALDWKIRRAAFRETVPDYVI
                     EDVLARIGAVLFD"
     gene            complement(1108..1260)
                     /locus_tag="ACFJCW_002175"
     CDS             complement(1108..1260)
                     /locus_tag="ACFJCW_002175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152201.1"
                     /translation="MKFSINREFRKMLKLFAEYAVLRRMFYAVLGAAPLTALIWKPAD
                     ILNALK"
     gene            complement(1421..>1606)
                     /locus_tag="ACFJCW_002176"
     CDS             complement(1421..>1606)
                     /locus_tag="ACFJCW_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152202.1"
                     /translation="RFVPLDQAWTCAAAGVFAGMMTGHALDTVRALAPKVLRGYLGGL
                     AEKLTGVKDGGSSDGKD"
BASE COUNT          362 a          534 c          379 g          331 t
ORIGIN      
        1 tcgagtttcg tcaaacccga cattgaccag gctttggcgc gataccagtc cctgatgacc
       61 gcgcgtcccg ctttgcccag gcagtgtccg acaaacaggc cgcaccacgg ggtatctgtt
      121 tctttccacc acgctttctg ctcctgatta aaatttccca tttcttgcag catcgctaaa
      181 agcacagggt ttgacttgcc attcactttt tcgtgagcgc caaggtattt acgggcttct
      241 tcaatccatt tcaattcttt catttctttt ccttccgata aaagacgaga tgtaaacttt
      301 cggtttacac cccggccaag cctttgattg caggtttccg caacaccgat acatccggtt
      361 tcacacgttc cgtttccatc tccactcctg ttacacgccg ccgcttggca aaatccgttt
      421 caggcggcat aatgtatcga caacgtatct acaacacgaa agcaaaacca tgttgcgact
      481 gcaaaaatgg ggcaacagcg cggcagtccg tctgcccgcc cgcctcctga ccgccctcaa
      541 cgccaaaatc ggcgacgcgc tggaaacaga aatccgcaac ggcgagctgc tcatccgccc
      601 cgtcaaacgc taccgcctgt ccgacctttt ggcggaaacg gaagccgccc cgccgcgcgc
      661 ggaaggctgg gaagaaatgc ccgatgtcgg acaggagggc gtttgatgta tattcccgag
      721 cgaggcgaca ttttccatct tgccttcgac cccgccgccg gtacggaaat gaaaggcggc
      781 cattacgcca tagccctgtc gcccagagct tacaaccgcg caaccggctt ggtttacgcc
      841 tgcccgattt cacaaggcag ggcggcggcg gcaagaagcg gcggtatgat ttccacactg
      901 ctcggcgcgg gaacggcaac acaaggcaat gtccactgcc accggatgaa ggcattggat
      961 tggaaaatcc gccgcgccgc cttccgcgaa accgtccccg attacgtgat tgaagacgta
     1021 ttggcacgca tcggcgcagt actgttcgac tgacttcaga gtgcgaagcc tgtccgcagg
     1081 gggaagcatc cgtttccata cccgccccta tttcaaagca ttcaaaatat ccgccggctt
     1141 ccaaatcaac gccgtcaaag gcgcggcgcc caaaaccgca taaaacatac ggcgcaacac
     1201 cgcatactcg gcaaacagct tcaacatctt gcgaaactcc ctgtttatgc taaacttcaa
     1261 acagatttct ccttacctcg gataaggtta aattcagaaa cgccgcaggg attccgcccc
     1321 tcgcggcgtt tcgccgtttt caaacctgcc gcgtaatgtc gtgcgtcagc cggacgcgcc
     1381 cggaacacag cgtcttcacg cgccgcgata ccgctcgaaa tcaatctttt ccatccgaag
     1441 accctccgtc tttcacaccc gtaagctttt ccgccaagcc gcccaagtaa ccgcgcaaca
     1501 ccttgggcgc gagcgcgcgc accgtatcga gcgcgtgccc cgtcatcatc cccgcgaaca
     1561 cccccgccgc cgcgcacgtc cacgcctgat ccagcggcac gaaccg
//
LOCUS       DAXGCP010000162         1592 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.163, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000162 DAXGCP010000000
VERSION     DAXGCP010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.163"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..1008
                     /gene="mutY"
                     /locus_tag="ACFJCW_002177"
     CDS             <1..1008
                     /gene="mutY"
                     /locus_tag="ACFJCW_002177"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HFC4152203.1"
                     /translation="IRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQVAAVLDYYPRF
                     LEKFPTVQTLAAAPQDEVLSLWAGLGYYGRARNLHKAAQQIVGQFGGTFPSERKDLET
                     LCGVGRSTAAAISAFAFNRRETILDGNVKRVLCRVFAQDGNPQDKKFENSLWTLAESL
                     MPSENADMPTYTQGLMDLGATVCKRTKPLCRQCPMADICEAKKQNRTAELPRKKTALE
                     VQTLPLYWLIVRNRDGAILLEKRPAKGIWGGLYCVPCFESLNGLSDFAAKLSLTMADM
                     DEQTALTHRLTHRLLMITPFEGQMPSEHHSDGIWIKPGHLKDYGLPKPLEIYLNGNRL
                     E"
     gene            complement(1384..>1592)
                     /locus_tag="ACFJCW_002178"
     CDS             complement(1384..>1592)
                     /locus_tag="ACFJCW_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152204.1"
                     /translation="FIGFIIHHLIYGFWRQGLTAFAAVIDFWDRGNAFKESKAIRPDA
                     DGGAIIHLLEFVAIGADSCDDYVE"
BASE COUNT          447 a          398 c          377 g          370 t
ORIGIN      
        1 atccgctggc aaaaacaaca cggtcgccac cacctccctt ggcaggtcaa aaacccttat
       61 tgcgtctggc tttccgaaat catgctccag caaacgcagg tcgccgccgt gttggactac
      121 tatccgcgtt tcttggaaaa attcccgacc gttcagacgc ttgccgccgc gccgcaagac
      181 gaagtgttgt cgttgtgggc gggcttgggc tattacggcc gcgcgcgcaa tctgcacaaa
      241 gccgcgcaac aaatcgtcgg acaattcggc ggtacgtttc catcggagcg caaagacttg
      301 gaaacgctct gcggcgtagg cagaagcacc gccgccgcca tttctgcctt tgctttcaac
      361 cgacgagaaa ccatcttgga cggcaacgtc aaacgcgttc tctgccgtgt ttttgcccaa
      421 gacggcaatc cgcaagataa aaaatttgaa aactcgctct ggacacttgc cgaaagcctg
      481 atgccgtctg aaaacgccga tatgcctact tacacgcaag gtttgatgga tttgggcgcg
      541 accgtgtgca aacggacgaa acccttgtgc cgtcaatgcc ctatggcgga catctgcgaa
      601 gcaaaaaagc aaaaccgcac cgccgagctg ccgcgtaaaa aaactgccct cgaagtgcaa
      661 accctgccgc tttactggct gattgtccgc aaccgggacg gcgcaatctt gctggaaaaa
      721 cgccccgcca aaggcatttg gggcggactg tattgcgtgc cgtgttttga aagtttgaac
      781 gggctttccg actttgccgc caaactctcc ctgacgatgg cggatatgga cgaacaaacc
      841 gccctgaccc accgcctgac gcaccggctg ctgatgatta cgccgtttga agggcaaatg
      901 ccgtccgaac accattcaga cggcatttgg ataaagccgg gccatttgaa agattacggc
      961 ctgcccaagc ctttggaaat ttatttaaac ggtaataggt tagaataaac aaaataaacc
     1021 cgttgaactg ttgttagcag gtatcgcagc aagaacaacc gatgaatttg ggtcgtattt
     1081 taggcagcgg gataatgttc aaatgggaca tttggaacgg aaaaagtcgg caatttaaaa
     1141 aggattttag aaacaaagag ggtcaaaaac atgaacacaa acttaaatga caaagacaaa
     1201 gccatggata ccgcaatcag gtttcagaaa aggatgagga ttccgaaatt tttcttttta
     1261 attctcggaa tcacagtggt tttggcattt atccaagacg tgataacggg ttctaatttt
     1321 ctgcaaataa caattatgca aataatattt gtgatatatt tcagtttcgg aggtatcata
     1381 attttattct acataatcat cgcaggaatc tgcccctatt gccacgaatt ccaaaagatg
     1441 aattatggca cctccgtcgg catcgggtcg gatagcttta ctttctttaa aggcatttcc
     1501 cctgtcccaa aaatcgatta ctgcagcaaa tgcggtaagc ccctgtctcc agaagccgta
     1561 aataaggtga tgaatgataa aaccgatgaa ga
//
LOCUS       DAXGCP010000163         1368 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.164, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000163 DAXGCP010000000
VERSION     DAXGCP010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1368
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.164"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(12..290)
                     /locus_tag="ACFJCW_002179"
     CDS             complement(12..290)
                     /locus_tag="ACFJCW_002179"
                     /inference="COORDINATES: protein motif:HMM:NF025063.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4152205.1"
                     /translation="MAISDVFYQKQLKGNGLVQSLSRKGNCLDNAAMESFFGTLKSEC
                     FHTCKYDSVTESEAALHEYIRYYNNDRIKLKLKGLSPVQYRIQSLKAA"
     gene            complement(254..832)
                     /locus_tag="ACFJCW_002180"
     CDS             complement(254..832)
                     /locus_tag="ACFJCW_002180"
                     /inference="COORDINATES: protein motif:HMM:NF033516.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HFC4152206.1"
                     /translation="MPSVELLLGIVGLPRSTFYYQLAVQSAEGKYADLKRHIHDIYQR
                     YKGRYGYRRIAAAIRHAGIPVNHKKVSRLMAKTGLKAVIRRRKYRSFKGEVGKVAQNI
                     LQRCFHSEKPNEKWVTDVTEFDVGGEKIYLSPIMDLFNGEIVSYRIQTRPTFDLAGEI
                     LKGAPEKPGPSEKPMLHSDQGWQYQMFFIKSS"
     gene            complement(837..1238)
                     /locus_tag="ACFJCW_002181"
     CDS             complement(837..1238)
                     /locus_tag="ACFJCW_002181"
                     /inference="COORDINATES: protein motif:HMM:NF024908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4152207.1"
                     /translation="MARYRLHGESGIKRRKHTTKYSVEYKLEAIRPVTGQGMSQKAAA
                     DQLNLPECSVLPQWLRLYRLNGINGLKPKPKGRKPVKKQYPPQTKKADYLKTKEELFA
                     ELAYLKAEAAVLKKLDALKEVRQKERNLSQG"
BASE COUNT          305 a          349 c          313 g          401 t
ORIGIN      
        1 ggacagttta atcaagcggc tttcagggac tgaattctgt actgaacagg gctcagtcct
       61 tttaatttca acttgattct atcgttgttg tagtaacgga tatattcgtg cagtgccgct
      121 tccgattcgg taacggaatc atatttgcac gtatggaaac attccgattt caacgttccg
      181 aagaaacttt ccattgccgc attgtccaag cagtttccct tgcgggacag actctgaacc
      241 agaccgttgc ctttcaactg cttttgataa aaaacatctg atattgccaa ccttgatccg
      301 aatgcagcat cggcttttca gacggccccg gtttctccgg cgcacctttc agtatctcgc
      361 cggccaaatc gaaagtcggg cgggtttgaa tacggtaact gacgatttcc ccgttaaaca
      421 aatccataat cggagaaagg tatatctttt ctccgcctac atcgaactcg gtaacgtccg
      481 ttacccattt ctcattcggc ttttctgaat ggaaacagcg ttgcaggatg ttctgcgcaa
      541 ctttgccgac ttctcctttg aacgagcggt atttgcgccg ccgtatcact gccttcagcc
      601 ccgtcttcgc catcagacgg ctgactttct tgtgattgac cggtattcct gcgtgacgga
      661 tggctgccgc aatcctccgg tagccgtatc ttcccttata tcgttgataa atatcatgga
      721 tatgtcgttt caaatcggca tatttgcctt ctgccgattg gacggccaat tggtaataga
      781 aggtgctgcg tggcagtccg acaatcccca acagcagttc aacggatggc atttccttaa
      841 ccctgcgaca agttgcgttc tttctgccgc acttctttca aggcatcgag cttttttagg
      901 acagccgctt ccgctttaag gtaagccaat tccgcaaaca gttcttcctt ggttttcaga
      961 tagtcggctt ttttcgtttg cggcggatac tgttttttca cgggctttct tcctttgggt
     1021 ttgggcttta aaccgttaat accattcaaa cggtagaggc gcaaccattg cggcaaaacg
     1081 gagcattcgg gcagattcag ttggtctgcg gcagcttttt gggacattcc ctgccccgtc
     1141 accgggcgga ttgcctcaag tttgtattcg accgaatatt ttgtcgtatg ctttctgcgt
     1201 ttgatgccgc tttcaccgtg taatctgtat cttgccaccc atttgcgtac caatgaatcg
     1261 gaaatggaaa aatatagtga attaacaaaa atcaggacaa ggcggcggac cgcaggcagt
     1321 acaaatggta cggaaccggt tcgcccggcg ctccatcacc ttagggaa
//
LOCUS       DAXGCP010000164         1366 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.165, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000164 DAXGCP010000000
VERSION     DAXGCP010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1366
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.165"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(232..1281)
                     /locus_tag="ACFJCW_002182"
     CDS             complement(232..1281)
                     /locus_tag="ACFJCW_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AcaB family transcriptional regulator"
                     /protein_id="HFC4152208.1"
                     /translation="MEFAKQRYIIKPGAIHVAQQFDLKVTTKQSPFSDGYDMARAALA
                     LGDKVNQKLTEDDEQFQQWEEFKAHELLLKQHLQKETGRKHHLVWGEYEILSSENDRF
                     KNIGSLTSSGDDGFFMHTKQGIRMWEGNNNKKNGPRWPGIRYGLTLSNELFGMAMSDN
                     PYAQSRLLQIEKQMSEIEEFFETVKKQVHAQIDSLAAAGMKITLIQNNNPVHIRLNVL
                     RAYGFKLVKLLRDYDSFVCAVKTLNIKGMMANKQCNDTLYNGGRMMRKLLNDLYIAVM
                     ETRAIKSIRRDSLLDPEQLSKLKSAVEQEILPRIPLSVWVYESQPSLVYIQRKMNQED
                     LNKLVDIVRDNGLSG"
BASE COUNT          409 a          328 c          205 g          424 t
ORIGIN      
        1 catcaattaa tagctcgaaa tcaaccaatt tcaatttaat ttctttttct aaatcctcaa
       61 tcccccttac ccttaaaagc cttttgtatt cccaaaattt taagtatttt ttcatacctg
      121 atatttgagt attcatagta ttcatatcac atcataaaaa aatccataca aacaagggcc
      181 aatcaatacc atcttaaaac tcgattgtaa ccccacgttc caatttcaca actagcccga
      241 taatccattg tcacgaacaa tatcaaccaa cttattgaga tcctcctgat tcatttttct
      301 ctggatataa accaaagagg gttgtgattc atacacccaa acagacaatg gaattctagg
      361 cagaatctct tgctcaacag cagatttcaa cttcgacaac tgctctgggt caagcagact
      421 gtcacgtcga atgctcttga tagccctggt ctccattacc gcaatatata aatcattcag
      481 tagctttctc atcatccgac cgccattata caacgtgtca ttacattgtt tattagccat
      541 catgcctttg atattaagtg tcttaacggc acatacaaaa ctatcgtaat cccgcaacaa
      601 tttaaccagt ttgaaaccat aagcccgcaa tacattcaat ctgatatgaa cagggttatt
      661 gttctgaatc aaggttatct tcatacctgc agcggccaaa ctatcaatct gagcatgaac
      721 ctgttttttc acagtctcaa aaaattcctc aatttcggac atctgttttt caatctgcaa
      781 taaccgactt tgggcataag gattatcgga catagccata ccaaacaact cgttactgag
      841 tgtcagacca tatctgattc ccggccaacg tgggccgttc ttcttgttgt tattgccctc
      901 ccacatacgg ataccttgct tggtatgcat aaaaaaacca tcatcaccgg aagaggtcag
      961 gctgccaata tttttaaacc ggtcgttctc agaagaaaga atttcatact ccccccaaac
     1021 caagtgatgc tttcgacctg tctccttttg tagatgttgc ttgagcagca attcatgtgc
     1081 tttaaactct tcccactgtt ggaactgttc gtcatcctca gtcaactttt gattgacctt
     1141 atcccccaaa gccaaagcag cacgagccat atcgtaaccg tcactgaaag gtgactgttt
     1201 tgttgtgact ttgagatcaa attgctgtgc aacatggatc gcaccaggtt tgatgatata
     1261 tctttgtttt gcaaattcca tttttaaatc cttataagtt attaaaaaga gcttcataaa
     1321 gcactgttgt tgcatatcag aggctaatta gtcatgtaca ccatca
//
LOCUS       DAXGCP010000165         1307 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.166, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000165 DAXGCP010000000
VERSION     DAXGCP010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1307)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1307)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1307
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.166"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            31..525
                     /locus_tag="ACFJCW_002183"
     CDS             31..525
                     /locus_tag="ACFJCW_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HFC4152209.1"
                     /translation="MTVQNTQTETVRTEAAPQQGGNTNPGYYKNREHECVGFAQYLNF
                     NLGNAFKYIWRHKEKGGREDLEKALRYLERQRADAPKFKKLKCRRYEKMYAGLKDCGF
                     DGGTEAALLAVISAAYYIRDGEDNFAWAAACVEDLLEKMPPEAGRAPHPESPMPPETA
                     GGGI"
     gene            702..851
                     /locus_tag="ACFJCW_002184"
     CDS             702..851
                     /locus_tag="ACFJCW_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152210.1"
                     /translation="MDTLLSIITALSFAGAATLAVWLLVEAADAVLRRKRDGKGEDDF
                     DGFGY"
     gene            881..1162
                     /locus_tag="ACFJCW_002185"
     CDS             881..1162
                     /locus_tag="ACFJCW_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152211.1"
                     /translation="MAEEMRTCKACGGTKPLEKGFNAVPRKEGGVYYYKSCKTCRNKA
                     VRQKRAEKRAAAGAGAMTAARLHGYIRAAHAACPILGAGLWTQPAGECA"
BASE COUNT          333 a          372 c          404 g          198 t
ORIGIN      
        1 ttaaaacgca aatttgaaag gaaatacgga atgacggtgc aaaacacgca aaccgaaacc
       61 gtccggacgg aagccgcgcc gcaacaaggc ggcaatacca acccgggcta ttacaaaaac
      121 cgcgaacacg agtgcgtcgg gtttgcgcaa tacctcaact tcaacctcgg caacgccttc
      181 aaatacatct ggcggcacaa ggaaaaaggc gggcgcgaag acttggaaaa agccctgcgg
      241 tacttggaac gccaacgcgc cgacgcgccg aagttcaaga aactcaaatg ccgccgctat
      301 gaaaaaatgt acgccggtct gaaagattgc gggttcgacg gcggcacgga ggccgcgctg
      361 cttgccgtca tctccgccgc ttattacatc cgcgacggcg aagacaattt tgcgtgggcg
      421 gccgcctgtg tcgaagattt gttggaaaaa atgccgcctg aagcggggcg ggccccgcac
      481 cctgaaagcc cgatgccgcc tgaaacggcg ggcggaggca tttgacccgc caacccgacc
      541 gccgccattc ccgcgaaagc gggaatccgg aatcccggac tttcagataa tctttgaata
      601 ttgctgttgt tccaaggtcc ggattcccgc ctgcgcggga atgacgaaag cggcgggaat
      661 ccgaccccga cccataaaac cgaccgaaag gaaataaaac aatggatacc ctgttaagca
      721 tcatcaccgc gctgtcgttt gccggggcgg cgacgttggc ggtatggctt ttggtggaag
      781 ccgccgacgc ggttttgcgc cgcaagcgcg acggcaaagg cgaagacgac ttcgacggct
      841 tcggatatta aacacataaa aaaccaaagg aaaaatcaaa atggcggaag aaatgcgcac
      901 ctgcaaggcc tgcggcggga ccaagccgtt ggagaaaggg tttaatgccg tcccgcgcaa
      961 ggaagggggg gtctattatt acaaatcgtg caaaacctgc cgcaacaagg cagtccggca
     1021 aaagcgcgcg gaaaaacgcg cggcggcggg agccggcgcg atgacggcgg caaggctgca
     1081 cggatacatc cgcgccgcgc acgccgcctg cccgatattg ggcgccggcc tgtggacgca
     1141 accggcaggg gaatgcgcgt gatacgcctt atcctgcctt accccgtatc ggcaaaccga
     1201 tattggcgga tttggcgcaa cagggcggtc aggagcgcgg aggcggcggc gtatagggaa
     1261 accgtccgcc gtatcgcgca aggggcgggc gcgatgccgt ccgaagg
//
LOCUS       DAXGCP010000166         1263 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.167, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000166 DAXGCP010000000
VERSION     DAXGCP010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.167"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            215..952
                     /locus_tag="ACFJCW_002186"
     CDS             215..952
                     /locus_tag="ACFJCW_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
                     /protein_id="HFC4152212.1"
                     /translation="MVKTADGYKAIAHIQAGDRVFAKDETSGKTGYKPVTARYGNPYQ
                     ETVYIKVSDGIGNSQTLISNRIHPFYSGGKWIKAEDLKAGSRLFAESGKTQTVRNIIV
                     KPTPLKAYNLTVADWHTYFVKGNQAETEGVWVHNDCPYGGSNNLEKAKLRAERLSKND
                     RAGKDFTKAGKEAVIDLNRIQNNGQVKCANCGIETIPAKQSIKNISPTSNERQVDHVI
                     PKSKGGQGTPKNGQVLCRGCNIKKSNK"
     gene            949..>1263
                     /locus_tag="ACFJCW_002187"
     CDS             949..>1263
                     /locus_tag="ACFJCW_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4265 domain-containing protein"
                     /protein_id="HFC4152213.1"
                     /translation="MKSKLTVVYYDLESNIAEEILSGNIMPDGNFLIQEIPLFAPNLA
                     LNDIVAIEREDKMLFFDHLIKASGNTTINIVVLDHFPKDLLAAIEEHSGKIRKNGENY
                     LSV"
BASE COUNT          441 a          258 c          247 g          317 t
ORIGIN      
        1 ctctaaaaat atttctataa ttcaagatat aatttctgaa tttattatga aaaataaacc
       61 aatcacaata atgatttaat tgaaaagttc aacaatcaaa aggtcgcctg aaatcgtgtt
      121 taattttcaa acgacctatt tccttcattt gaaacaggat attgaaaact aagttcttca
      181 aaaatcctac acctgccctt tccacggcag caccttggtc aaaacggcag acggctacaa
      241 agccattgcc catattcaag ccggcgaccg cgtcttcgcc aaagatgaaa ccagtggaaa
      301 aactggatac aaacccgtta ccgcccgata cggcaatccg taccaagaaa ccgtttacat
      361 taaagtttca gacggcatcg gcaacagcca aaccctgatt tccaaccgca tccatccgtt
      421 ttattcgggc ggcaaatgga ttaaagcgga agatttgaaa gcgggaagca ggctgtttgc
      481 cgaaagcggc aaaacccaaa ccgtccgcaa catcattgtc aaaccaacac cgctcaaagc
      541 ctacaatctg accgttgccg actggcatac ctacttcgtc aagggtaatc aggcggaaac
      601 ggaaggggtt tgggttcata atgattgtcc gtatggcggt tcaaataatt tagagaaagc
      661 aaaacttcgc gcagaacggc ttagtaaaaa cgatcgggca ggaaaagact ttactaaagc
      721 aggaaaagaa gccgttattg atttgaatag gattcaaaat aatggtcaag ttaagtgcgc
      781 taattgcggt attgaaacaa ttccagccaa acaatctata aaaaatattt ctcctacttc
      841 aaatgaaaga caagtagatc atgtcatccc taaatctaag ggtggtcaag gtacacctaa
      901 aaacgggcag gtattatgca gaggctgcaa cattaagaag agtaacaaat gaaatcgaaa
      961 cttactgtcg tctattacga tttggaaagc aatattgcag aagaaatact gtcaggaaac
     1021 ataatgcctg atggaaattt tcttattcaa gagattcctc ttttcgcacc gaatttggct
     1081 ttaaacgaca ttgttgccat agaacgtgag gataagatgc tgtttttcga ccacttgata
     1141 aaagcttcag gaaataccac gataaacatc gttgttttgg atcatttccc aaaggattta
     1201 ttggcagcca tagaagaaca cagtggtaaa atcagaaaaa atggagagaa ttatttatcg
     1261 gtt
//
LOCUS       DAXGCP010000167         1248 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.168, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000167 DAXGCP010000000
VERSION     DAXGCP010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1248)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.168"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..207)
                     /locus_tag="ACFJCW_002188"
     CDS             complement(<1..207)
                     /locus_tag="ACFJCW_002188"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152214.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFARMNGGYCFYQS"
     gene            435..731
                     /locus_tag="ACFJCW_002189"
     CDS             435..731
                     /locus_tag="ACFJCW_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152215.1"
                     /translation="MRFKAEYARSKNDADDKRGNAHIANGAIGKMAAVYAGYTYTQPG
                     GESTRFRGGLERVQVKRYLGEKCCGYACPKSERFTLQADGEIRQNLGEGWFLKL"
     gene            728..967
                     /locus_tag="ACFJCW_002190"
     CDS             728..967
                     /locus_tag="ACFJCW_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152216.1"
                     /translation="MSGVAVYLRNKNKIAIASQDANLNSKGRFVSSGLNVGKQLTGSL
                     GVEFDPYYRHRAIRKSAEFVPNTTKTKTDSEKFNE"
BASE COUNT          378 a          341 c          251 g          278 t
ORIGIN      
        1 agattgataa aaacaatacc cgccattcat tcgggcaaaa ccgcacggaa catccgtttt
       61 cccgtttcca cgacaatccg gtacaggaca ccccgctgcc gattccgcct gcacatccgg
      121 caaaatttca tacgcaagga aaatgttgaa aacaaaaaga actaattgct tgaaaaaaga
      181 tttaattgga atgcgggtat ttcccacact ttctccattt atttatcctc attataaaaa
      241 catgaaaaaa aacccctgct tgcactctca cttgcagccg tgtccgccgt tacggtagcc
      301 gatattcccg agtctaacgg caaaggcgaa tacaaagtct ttaccgctta tgttaaaggc
      361 aaagccactg ccggcaattt gaaagaaaaa taacgcacac cgtccatcgg ttttcgttca
      421 acgaacgcca cgatatgcgt tttaaggcag agtacgcccg aagcaaaaac gatgcagacg
      481 acaaaagagg gaatgcacac atcgctaacg gcgcaatagg caaaatggct gccgtgtatg
      541 ccggttatac ctacacccaa ccgggcggcg aatccacacg tttccgtggc ggtttggagc
      601 gtgtccaagt taaacgttat ctgggagaaa aatgctgcgg ctacgcctgt ccaaaaagcg
      661 aacgcttcac cctgcaagca gatggtgaaa tccgtcaaaa ccttggcgaa ggctggtttc
      721 tgaagctatg agcggggtgg ctgtctatct ccgcaacaaa aacaaaatag caattgcctc
      781 ccaagatgcc aacctaaact ccaaaggccg gttcgtcagc agcggtctga atgtgggcaa
      841 acaactgacc ggcagtctcg gcgtagagtt tgacccatac taccgccacc gcgcaatccg
      901 caagtctgcc gaatttgtcc cgaacactac caaaaccaaa acagacagcg aaaagtttaa
      961 cgagtagggc ttccgcgtag ccgcaacgtt ctaattccct tacgtataaa aagcagcata
     1021 aaaatgctgc cttttcccat ttccaaggga agtattccgt agtgcagctt acctcattgt
     1081 ttcacacaaa ccgaaaatgc cgtcttaaaa ccaattttca gacggcattt gtcccttaaa
     1141 acacgttttt tcaagcgcga ccataccaaa cacccacagg ttgccttcca cccttcgtac
     1201 aacctttgct ccatcaaaca tccacttcct aaatactgat gtatactg
//
LOCUS       DAXGCP010000168         1193 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.169, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000168 DAXGCP010000000
VERSION     DAXGCP010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.169"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          272 a          313 c          278 g          330 t
ORIGIN      
        1 tgcggcttac tgccctctct ctagctttct cccacaggga gagaggacgg tgcggctgtt
       61 ggggttaagg tttctgtaaa ctaatcagct tgtgcaggct gttttttatt tttcatacga
      121 cctgaaatca acggtaaatc caagttgctt ttcaaaccgc ctgcaaccgc caaacctgct
      181 gcaatccgct ccctcccccg tgggggaggg ccggggagag ggcattctcc gagttgcggc
      241 aatctttccc aaactccctt agtcttctaa aatacaaacc ttgcggcttg ttgccctctc
      301 tctaactctc tcccgcaggg agagaggacg gggtggctgt tggggttaag gtttatgcaa
      361 actaatacgg cttgtgcagg ctgtttttta tttttcatac gacctgaaat caacggtaaa
      421 tccaagttgc ttttcaaacc gcctgcaacc gccaaacctg ctgcaatccg ctccctcccc
      481 tgcgcggggg agggctgggg agagggcact ttccaagttg cggcaacctc tcccaaatcc
      541 cttagtcttc taaaacacaa gccttgcggc ttactgccct ctctctaact ctctcccgca
      601 gggagagagg acggggtggc tgttggggtt aaggtttatg caaactaata cggcttgctg
      661 ccctctctct aactctctcc cacggggaga gaggactatg atgcccaccg gcggcttgct
      721 attaggaata tctgaatcgt cattcccacg aaagtgggaa tctagaacgt caaatctcaa
      781 gaaaccgttt tatccgataa gtttctgttc cgacaggttc ggattcccgc ctgcgcggga
      841 atgacgaatc catccatacg gaaacctgca tcccgtcatt cccacgaacc tacattccgt
      901 cattcccacg aaagtgggaa tccggttttt tgagtttcag tcattcccga taaattgcct
      961 tagcattgaa ggtccggatt cccgcctgcg cgggaatgac gggatttgag gtttctgttt
     1021 ttaattttct gttttcacgg gaatgacggt ttaaaagtta cccgaaacct caaaaaaagc
     1081 tgtgttttaa tatagtgttg atagacgtac ttggcctcca tgtattcaat cgtggaaatc
     1141 tatatcttcg tcctcgccga aatagtctat gcccgatata caattttgat aca
//
LOCUS       DAXGCP010000169         1170 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.170, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000169 DAXGCP010000000
VERSION     DAXGCP010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.170"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..241)
                     /locus_tag="ACFJCW_002191"
     CDS             complement(<1..241)
                     /locus_tag="ACFJCW_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HFC4152217.1"
                     /translation="MGLTQEVLKELLRYDDNTGKLYWAERPRKYFNSGLHYKSWNTGF
                     SGKEVFLYKGRLGYLKLKIFKKQYNAHRLIWLFVYG"
     gene            complement(232..615)
                     /locus_tag="ACFJCW_002192"
     CDS             complement(232..615)
                     /locus_tag="ACFJCW_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein NinB"
                     /protein_id="HFC4152218.1"
                     /translation="MNGAEFTLTPQNKKQVMRSIWDSPDGWFENGNLEITIRPRKSKR
                     SIEQNRRLWFLYREISEKVFIDGRRFSQDVWHEFLKRKFIGCIEMPNGQLMGISTTKL
                     SVREMSEYQEKIISWASMEHGVLWD"
     gene            complement(612..917)
                     /locus_tag="ACFJCW_002193"
     CDS             complement(612..917)
                     /locus_tag="ACFJCW_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclease domain-containing protein"
                     /protein_id="HFC4152219.1"
                     /translation="MSSAIRKAAKGGQCTPNIAGVCNDNPETVVLCRFPGETHGAGLK
                     SGGLGAGFGCGCRRGAIDGRGAGLSREDKEFYMRRSQLRTIRRLEALGVVGVKGRLK"
     gene            complement(910..>1170)
                     /locus_tag="ACFJCW_002194"
     CDS             complement(910..>1170)
                     /locus_tag="ACFJCW_002194"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HFC4152220.1"
                     /translation="LIPKANKDGGANKTVIDLDNALKVALDALQGVAYHNDRQVRRIA
                     ADYAGEPVAGGGLAVEVGELEMEQTDAADEGWDFIGQEGWDV"
BASE COUNT          265 a          360 c          222 g          323 t
ORIGIN      
        1 tcccataaac aaaaagccaa attaatctat gtgcattata ttgtttctta aatattttta
       61 acttcaaata ccccaacctg cctttgtata agaaaacctc cttgccggaa aatccggtat
      121 tccaagattt gtaatgcaaa ccgctattga aatactttct tggacgctcc gcccaatata
      181 actttcccgt attgtcatca tatcttaata attcttttaa aacctcttgt gttaatccca
      241 taaaacacca tgctccatag atgcccaaga tataatcttt tcttgatatt cagacatttc
      301 ccgaactgat aattttgtcg ttgatatacc cattaattgc ccgttaggca tttcaataca
      361 tccaataaat tttcttttta aaaattcatg ccatacatct tgactaaacc ttctcccatc
      421 gataaaaact ttttctgaaa tttcacgata caaaaaccat agccgcctgt tctgctcgat
      481 gctccgtttt gacttgcgcg ggcggattgt gatttcaagg ttgccgtttt caaaccaccc
      541 gtccgggctg tcccaaatcg accgcataac ctgctttttg ttttggggcg tcagtgtaaa
      601 ttccgccccg ttcatttcag acggcctttc acgccgacaa cccccagtgc ttcaaggcgg
      661 cgtatcgtgc gcaattgcga acggcgcata taaaattcct tgtcttcgcg gcttaggcct
      721 gcgcccctgc cgtcgatcgc gccgcggcgg caaccgcacc cgaaacccgc gcccaaaccg
      781 ccgcttttca atcccgcccc gtgcgtctcg cccgggaaac ggcacaacac gaccgtttca
      841 gggttgtcat tgcacacgcc cgcgatgttc ggcgtgcatt gcccgccttt ggcggctttg
      901 cgtatcgcgc tagacatccc aaccctcctg tccgatgaaa tcccaaccct cgtctgccgc
      961 atccgtctgt tccatctcca actcccccac ttccaccgcc aaaccgccgc ctgcgaccgg
     1021 ctcgccggcg taatcggcgg caatgcgccg cacctgcctg tcgttgtgat aggcaacgcc
     1081 ttgaagcgcg tccagcgcaa ccttcagggc gttgtccaaa tcgatcaccg tcttgtttgc
     1141 gccgccgtct ttgttcgctt tgggaatcag
//
LOCUS       DAXGCP010000170         1126 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.171, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000170 DAXGCP010000000
VERSION     DAXGCP010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1126)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1126)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1126
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.171"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..265)
                     /locus_tag="ACFJCW_002195"
     CDS             complement(<1..265)
                     /locus_tag="ACFJCW_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152221.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFGGKPADEARFAAVLTETCRRAVKK"
     gene            complement(302..565)
                     /locus_tag="ACFJCW_002196"
     CDS             complement(302..565)
                     /locus_tag="ACFJCW_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152222.1"
                     /translation="MADILPSDKRRQPPKTKGNPINIIEQETKRTELRKIDAEIAKII
                     ADAHKINAESVKIAQESRWYPMMAATGLVTAIAAVLALIFKFA"
     gene            complement(585..833)
                     /locus_tag="ACFJCW_002197"
     CDS             complement(585..833)
                     /locus_tag="ACFJCW_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152223.1"
                     /translation="MHGFRDLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHH
                     YLTADSYRLQERRELAEWYGRRHRQAYEAAAQNTCNKT"
     gene            complement(794..>1126)
                     /locus_tag="ACFJCW_002198"
     CDS             complement(794..>1126)
                     /locus_tag="ACFJCW_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HFC4152224.1"
                     /translation="SALLSARWQDIDLTARLWHIPAADMKTKHPFTVPLSDWAVEILR
                     ELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTPANPNTPCTDS
                     ATSSPTSA"
BASE COUNT          172 a          234 c          406 g          314 t
ORIGIN      
        1 tttttttgac tgcccggcgg caggtttcgg taaggacggc ggcaaatcgg gcttcgtctg
       61 ccggtttgcc gccgaaaaaa ataaaatcgt aaagggtgat gccgttttcg gaatggcggt
      121 aatgcccgcc cgggcattcg ccgtctgtct gcctgtggat tttggcaatc aggcggggat
      181 agcggcaatg ggtaatgaaa cggcttgcgc cgtcttgccc gataatccat tcggggtagc
      241 ggttgaatag tgcggctctg ttcattttgt tgagggataa agcccctcgc ggggcttgtg
      301 gtcaggcaaa tttgaatatc agtgccaaca cggcggcgat ggcggtaacc agaccggtgg
      361 ccgccatcat gggataccag cgggactctt gggctatttt tacggattcg gcgttgattt
      421 tgtgcgcgtc ggcaatgatt ttggcgattt cggcatctat ttttcttaac tcggtgcgtt
      481 ttgtttcttg ttcgattatg tttattggat ttcctttcgt ttttggcggt tgccgccgct
      541 tgtcggatgg caggatgtct gccatgtatg tatgttaata ccttttaggt tttattgcaa
      601 gtgttttggg cggcggcttc gtatgcttgg cggtggcggc ggccgtacca ttcggcgagt
      661 tcgcgccgct cttggaggcg gtagctgtcg gcggtcaggt agtggtgcag gcttgagaag
      721 ccggcgcgtt ggagggcggc gcggctgatg tggccaaggg cgaggtctgt tgtgagggtg
      781 tcttttccgg cggtcaggct gatgttggtg aagaggtcgc ggaatccgtg catggtgtgt
      841 ttggatttgc cggggtgctg ccgtcatagc ccagtcgtcg gatggcgttg tgggcgaatt
      901 tgatgctgat gtggtcggga tggggggcgg gtttgcgccg tgggcggatg cctgggaaaa
      961 ggtggatgtt gtcgccggtc tgtgtgtgca gctctcggag tatttctact gcccagtccg
     1021 acagtgggac ggtaaagggg tgtttggtct tcatgtcggc ggcggggatg tgccataacc
     1081 gggcggtgag gtcgatgtct tgccagcggg cggaaagcag tgcgga
//
LOCUS       DAXGCP010000171         1115 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.172, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000171 DAXGCP010000000
VERSION     DAXGCP010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1115
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.172"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..216)
                     /locus_tag="ACFJCW_002199"
     CDS             complement(<1..216)
                     /locus_tag="ACFJCW_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4152225.1"
                     /translation="MKITHCKLKKEVQKEPLRSFVPEVTARSAADILGIHPDSAALFY
                     RKIRTVTNHRLALAADEVFEGPAGPGGS"
     gene            417..977
                     /locus_tag="ACFJCW_002200"
     CDS             417..977
                     /locus_tag="ACFJCW_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HFC4152226.1"
                     /translation="MKKIIFAALAAAAVGTASATYKVDEYHANVRFAIDHFNTSTNVG
                     GFYGLTGSVEFDQAKRDGKIDITIPVANLQSGSQHFTGHLKSADIFDAAQYPDIRFVS
                     TKFNFNGKKLVSVDGNLTMRGKTAPVKLKAEKFNCYQSPMAETEVCGGDFSTTIDRTK
                     WGVDYLVNAGMTKNVRIDIQIEAAKQ"
BASE COUNT          299 a          353 c          248 g          215 t
ORIGIN      
        1 gcttccgccc ggcccggcgg ggccctcgaa aacctcatcg gcagccaagg ccaaacgatg
       61 gttggtaacc gtgcggattt tacggtaaaa cagtgccgcc gaatcgggat ggatacccaa
      121 aatatcggcg gcagaacggg cggtaacttc cggtacaaaa gaacggagcg gttctttctg
      181 tacttctttc tttaatttgc agtgtgttat cttcatattt cgagggtaac atatctgcta
      241 atctggtaca gacccaaaaa caaagcacgg ataacaccgc gctttttcat ccgccctgtt
      301 ccgcccgccc gttcgtcaac cgcctgcaaa cccaccgttt accggcagga aatgccataa
      361 atccccgcct atgttaggat aaacgccttt accggcccac acaaaggatt atcatcatga
      421 aaaaaatcat cttcgccgcg ctcgcagcgg cagccgtcgg cactgcctcc gccacctaca
      481 aagtggacga atatcacgcc aacgtccgtt tcgccatcga ccacttcaac accagcacca
      541 acgtcggcgg tttttacggt ctgaccggtt ccgtcgagtt cgatcaagca aaacgcgacg
      601 gcaaaatcga catcaccatt cccgtcgcca acctgcaaag cggttcgcaa cacttcaccg
      661 gccacctgaa atccgccgac atcttcgatg ccgctcaata tccggacatc cgcttcgttt
      721 ccaccaaatt caacttcaac ggcaaaaaac ttgtttccgt tgacggcaac ctgaccatgc
      781 gcggcaaaac cgcccccgtc aaactcaaag ccgaaaaatt caactgctac caaagcccga
      841 tggcggaaac cgaagtttgc ggcggcgact tcagcaccac catcgaccgc accaaatggg
      901 gcgtggacta cctcgttaac gccggtatga ccaaaaacgt ccgcatcgac atccaaatcg
      961 aagctgcaaa acaataagcc ttgatgcgaa tcagcacaaa tgccgtcttc atcaaaccgc
     1021 cctgccaacc gtaagccgat atggcggagc acaacccgcc gaaagatatt ttggcggcag
     1081 gcggggcttg ccggaaagtc cggaaagtaa cgacc
//
LOCUS       DAXGCP010000172         1077 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.173, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000172 DAXGCP010000000
VERSION     DAXGCP010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1077)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1077)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1077
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.173"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(275..751)
                     /gene="greA"
                     /locus_tag="ACFJCW_002201"
     CDS             complement(275..751)
                     /gene="greA"
                     /locus_tag="ACFJCW_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HFC4152227.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPAEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
BASE COUNT          288 a          264 c          229 g          296 t
ORIGIN      
        1 agtctccaat taccccccga aaaaaaaacc atttttcgga acaaatttcg ggtaaatttt
       61 ggaattttta ttttgaaaaa taatatttca atataaaaca ataaattaac ttttttgaaa
      121 atgttgcttt cccgcaacat gatttaaata cagaccttgt caaagccgat gcggcgcaga
      181 cccggatgcc gtctcgtttt ttaaaacacc ataaaaaaac acacgcggtg ctttaatttc
      241 ctgcgtgtgt cgagtgtatc gaaatcaagc cgaatcaaat ataccggact tcgataatat
      301 cgtattcgcg tacgccgccc ggtgcctgaa cttccgccgt atccccttct tccttgccga
      361 tcagggcgcg ggcaatcgga gagccgacat agattttgcc ctgtttgatg tcggcttcgt
      421 cttcgccgac aatttgatag gtaacgtgtt cttccgtttc caaatcttcc agcgtaaccg
      481 tcgtaccgaa cacgattttg ccttcggcgt ggatttcggc cggattgatg atgtgggcaa
      541 cggaaagttt gtgttccaac tcggaaatgc ggccctcgat aaaaccttgg cgttctttgg
      601 cggcttcgta ttcggcgttt tcggacaaat cgccgtgcga tctggcttcg gcaatcgctt
      661 cgatcacttc gggacgcgcc acgcttttga gctgctgcaa ttcctgtttc agcaattccg
      721 caccgcgtac ggtcaggggg attttttgca tcggtctttt tctccatatt ccggcacacc
      781 ggtttgcggc ggcaagcata ccgcgtaccg tcttgttttg tgcgtccgga tattaaaata
      841 aaaatacaag ccgcccggaa aatcggcggc ttgtctgtcg ttgaacagcg gctattctac
      901 caaattctat gaaattggca atcgtgccgt gccgccggca aacgcgctat gtccgcaaca
      961 aaagccgaaa atatgccggc aaaaaaattt tagaaacaaa aaatttaaaa aaaatcaatt
     1021 ttcggcataa aaaaccaaat tcacgtactt taaaaccgaa aatgccaaac ctgagat
//
LOCUS       DAXGCP010000173         1036 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.174, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000173 DAXGCP010000000
VERSION     DAXGCP010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1036)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1036)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1036
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.174"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..238
                     /locus_tag="ACFJCW_002202"
     CDS             <1..238
                     /locus_tag="ACFJCW_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HFC4152228.1"
                     /translation="SDAGGFTRCRINRSKEFADRRNHINGIGSFWNQAKRALRKYNGI
                     DRKPFPPLLRECEFRLNSGTPSRQLKILRDRCGI"
     gene            512..838
                     /locus_tag="ACFJCW_002203"
                     /pseudo
     CDS             512..838
                     /locus_tag="ACFJCW_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          284 a          261 c          265 g          226 t
ORIGIN      
        1 gtcggacgcg ggcggtttta cccgttgccg catcaaccgt tccaaggaat ttgcagaccg
       61 tcggaaccac attaacggca ttgggagctt ttggaatcag gcaaaacgcg ccttgcgaaa
      121 atacaacgga atcgatcgta aacctttccc gccgttgttg agggaatgcg aatttcgact
      181 taactccggc acaccgtccc ggcagctaaa aatcctgcgg gatcggtgtg gaatttaggg
      241 ataatctagt acagccacaa aaataaaata gggagggatg tcatgatatt tgaaaaatca
      301 ataaacggct ggaaataccg cgccgtaatg gaaatcagaa ccacgcaaaa ggagcttgcc
      361 ttgaacagcc tttatacaac agacaggatt gaatagtcat gacaaaacct gcgacgagta
      421 actgtcaatc tttcgattcc gtcctcatac atcctaagcg tctttgcaaa ttctgttcag
      481 ttataccatt tatacagaca ggagcaaacc aatgacgaag ttatacgcag aaatcgccga
      541 gatggaggcg caggacgacg gcacggtcaa agtttggggt tatgcctcaa gcgaggcggt
      601 cgattcggac ggcgaagtca tcgcggcggc ggctatgaag gcggcgattc ccgattatat
      661 gaagttcggc gaggtgcgcg agatgcacgg cagcaacgcg gcgggaacgg cgattgaaat
      721 caacgtggaa gacgacggca gaaccttttt cggggcgcat atcgtcgatc ccgttgcagt
      781 ggagaaagtc aaaacgggcg tttacaaggg cttttccatc ggcggcagcg ttaccgctgt
      841 ctgcttaggt tgaatcggca ttcgtacgat tacggcacac cgcctaatct gtacctgcgt
      901 ctgttgcgcc caataccaaa ggctacctga aaatctccca aacttttcag gtagccttat
      961 cacgttttca actgccgcca cacgcccaaa gaccgcctga aacccttttt cagacgttcc
     1021 gctctgatac acccaa
//
LOCUS       DAXGCP010000174         1018 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.175, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000174 DAXGCP010000000
VERSION     DAXGCP010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1018)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1018)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1018
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.175"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            52..516
                     /locus_tag="ACFJCW_002204"
                     /pseudo
     CDS             52..516
                     /locus_tag="ACFJCW_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238025.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
     gene            766..>1018
                     /locus_tag="ACFJCW_002205"
     CDS             766..>1018
                     /locus_tag="ACFJCW_002205"
                     /inference="COORDINATES: protein motif:HMM:NF013704.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HFC4152229.1"
                     /translation="MIYIDPPYNTETDSFAYNDKFSHSTWLTFMKNRLEIAKELLKDD
                     GLIFVQCDDKEQAYLKVLLDETFTRENFINCIAVKMSEPS"
BASE COUNT          349 a          204 c          196 g          269 t
ORIGIN      
        1 tgccgttaca caagaatggc acattaaaat aactgatgag gatttataac gatgaagaca
       61 ggcattcaaa ccgaattagc ccaagccctg ctaccacacg aaaaaatatg ggcgaacgaa
      121 gaaaaaacca ttttggccaa aaacatcctg ttggatttgg tggaaaaaac cgacccgtcc
      181 attatcggtt tgttattgaa taatgatgag ttaaaacgcc atttctttgt ggaagtgaat
      241 ggtgttttgg tgtttaaatt gcaggatttt cgttttttct tggacaaaca cagcatcaat
      301 aattcctaca caaaatacgc caaccgcatt ggtttgacgg acggcaaccg ctttttgaaa
      361 gacaattcgg atattgtgtt ggattttccg tttaaagatt gcgtattgaa tggcggacaa
      421 agcaccgaag aaggcgaaga aatttatttt aaacgcaata atagccagcc agccagccag
      481 ccagccagcc agccagccag ccagccagcc agccaattat acaccaaatt aaccagaaaa
      541 agacaagaaa tcttttttaa tcaaacgctt gcttttgatg aaattgaccg gctttttgac
      601 gcaaaagcat tctcaaaatt ctcccgccac accgcagacg gcaaacaacc cgttggcgaa
      661 atcaaacgcc gttcagacgg tacgccagcc gaaaatctta ttatcaaagg caataatctg
      721 attgccctgc attcgcttgc caagcagttt aaaggcaaag taaagttgat ttatattgat
      781 ccaccgtata atacagaaac cgatagcttt gcatataacg ataaattttc acattccact
      841 tggctaacat ttatgaaaaa tcgcttggaa attgcgaaag agttattaaa agatgatggg
      901 ctaatctttg ttcaatgcga tgataaggaa caggcttatt taaaagtttt attagatgaa
      961 acttttacaa gagaaaattt tataaactgc attgctgtaa aaatgtcaga gccatcag
//
LOCUS       DAXGCP010000175          978 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.176, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000175 DAXGCP010000000
VERSION     DAXGCP010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 978)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 978)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..978
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.176"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            1..313
                     /locus_tag="ACFJCW_002206"
                     /pseudo
     CDS             1..313
                     /locus_tag="ACFJCW_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            695..978
                     /locus_tag="ACFJCW_002207"
                     /pseudo
     CDS             695..978
                     /locus_tag="ACFJCW_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581605.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          275 a          272 c          239 g          192 t
ORIGIN      
        1 gccggaaaac aacacttctg ccggcgtggc atcctccgcc gccgacatca aaggcaaata
       61 tgttgaaagc gttacggtcg caaaaggcgt cgttaccgcc caaatggctt caagcaacgt
      121 aaacaatgaa atcaaaggca aaaaactctc cctgtgggcc aagcgtcaag acggttcggt
      181 aaaatggttc tgcggacagc cggttacgcg caccggcgac aacgacgaca ccgttgccgc
      241 cgacggcacc gacggcaaag acaaaatcga aaccaagcac ctgccgtcaa cctgccgcga
      301 taaatcaact gccgtttgca cgaaacacca cgcgccgatt tcaaacactt ccaaaaaatc
      361 agccgttgcc gggtattgcc cgaatcacgg cacatggccg aaaaacttcg tcattcccgc
      421 gaaagcggga atccaggtct gtcggcacgg aaacttatcg ggtaaaaagg tttctccggt
      481 cctgagtcct ggattcccac tttcgtggga atgacggtat atcggtttcc gttcggacaa
      541 atgtctgcgc aggaataaat ggccgcgttt gaattctcgg ttaattccat ttattagccg
      601 cttgcttctg tttgcatgaa agccgggatt attgaataaa atacatttgc acggccggtt
      661 aggtttgccc gccggaatat taaaacaccg cccaaaaaaa tcagccgttg ccgggtattg
      721 cccgaatcac ggcaaatggc cggaaaacaa cacttctgcc ggcgtggcat cccccccctc
      781 cgacatcaaa ggcaaatatg ttaaggaagt taaagtcgaa aacggcgtcg ttaccgccac
      841 aatgctttca agcggcgtaa acaatgaaat caaaggcaaa aaactctccc tgtgggccaa
      901 gcgtgaagac ggttcggtaa aatggttctg cggacagccg gttacgcgca ccgacgacga
      961 caccgttgcc gacgccaa
//
LOCUS       DAXGCP010000176          941 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.177, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000176 DAXGCP010000000
VERSION     DAXGCP010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.177"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..339
                     /locus_tag="ACFJCW_002208"
     CDS             <1..339
                     /locus_tag="ACFJCW_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD hydrolase family protein"
                     /protein_id="HFC4152230.1"
                     /translation="LPFRAMVSDLGGTLLTPEHLVGDLTIDTLRVLEQKGVDIILATG
                     RNHTDMSSILGKIGAERAVMITSNGARVRDLQGNLLYSNSLPEELVLELYKTSYVGNL
                     IQIPRFCRHQ"
     gene            293..941
                     /locus_tag="ACFJCW_002209"
                     /pseudo
     CDS             293..941
                     /locus_tag="ACFJCW_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
BASE COUNT          281 a          191 c          228 g          241 t
ORIGIN      
        1 ttaccttttc gggcaatggt gtctgattta ggtggcacac ttttaacacc tgaacattta
       61 gtgggtgatc ttaccattga tactctgaga gtattagagc aaaaaggcgt agatattatt
      121 ttggcaacag gacgcaatca taccgatatg tcatccattc ttggaaaaat cggtgcggaa
      181 cgtgcggtta tgattacatc aaacggtgct cgtgtacggg atttacaggg taatttgctt
      241 tatagcaata gtttgcctga agaattagtt ctcgagcttt acaaaacatc atatgtggga
      301 aatcttattc agataccaag attttgtcgc catcaataaa cctcaaggca tatccgtcca
      361 ccgttccggc ggcgaagtca gtctgacggc aacacttgcg gcacagttgg gcgtagaaaa
      421 ggtatggttg ctgcacaggt tggacaagca ggccggaggc atattgctgt ttgcccttaa
      481 tccccaaagt gccgctgttc ttgccgcaca gtttgccgaa aggaaaatga agaaaaccta
      541 tttggctttg tccgaccgca aaccgtccaa aaaacaagga tggataaaag gcggcatgga
      601 aaaatccagg cgcgggatgt ggaagctgac gcgcaatatg gaaaatattg ccgttacccg
      661 gtttttcagt atccgcatca gtgaaaaaat gcggctgttc atccttgagc cacatacggg
      721 taagacacat cagttgaggg tggtaatgaa gagtctgggc agctctatat ttggggacag
      781 cctgtatgga ggaacagaat ccgaaactat gttcctgtat gcgtgaaaaa tacaatttac
      841 ctatcaacaa caagaaatcg aaattaccgc acctttgaaa aatgcatggc aggccgaaaa
      901 tatctctcat gcactggaag aattttatat ggcaaaagca g
//
LOCUS       DAXGCP010000177          912 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.178, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000177 DAXGCP010000000
VERSION     DAXGCP010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 912)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 912)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..912
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.178"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..289)
                     /locus_tag="ACFJCW_002210"
     CDS             complement(<1..289)
                     /locus_tag="ACFJCW_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HFC4152231.1"
                     /translation="MRNTVGLDISKLTFDATAIVGNAEYSAKFDNDSKGLDQFSDRLK
                     SLGCQNLHICMEATGNYYEEVADYFAQYYSVYVVNPLKISKYAESRFKRTKT"
     gene            369..598
                     /locus_tag="ACFJCW_002211"
                     /pseudo
     CDS             369..598
                     /locus_tag="ACFJCW_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(635..>912)
                     /locus_tag="ACFJCW_002212"
     CDS             complement(635..>912)
                     /locus_tag="ACFJCW_002212"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152232.1"
                     /translation="GILQRSSGLYYKIWEGGWRMPALPFFRTSIPMLVQNRMESIFNH
                     NKDAIFLEGWSLGDAAMIMELLWQNISTSRRELTKLFLYKNFWGCTR"
BASE COUNT          260 a          195 c          177 g          280 t
ORIGIN      
        1 ctgttttggt tcgcttgaac ctgctttctg catacttgct tattttcagc gggttcacta
       61 cgtaaacgct gtaatactgc gcgaagtagt cggcaacttc ttcataatag tttcccgttg
      121 cctccatgca gatatgcaga ttctgacatc ccaagctttt caaccggtcc gaaaactgat
      181 ctaaaccttt tgaatcgttg tcaaactttg ccgaatattc ggcattgccg acaatggccg
      241 ttgcgtcaaa agtcaacttg gatatgtcca atcctacggt gttacgcatg ggattaccct
      301 tatatattgc gtccctaaga aggggcgatt aacaaaaatt aatgcccttt cttagggacg
      361 caatatataa ggtttatacc gtcgttgtcc ctaatgcgca atcagcgaca ttgttgccaa
      421 ttatccgaaa gaaagttaag cctgatggca ttgtatacac ggataccttt cgtagttatg
      481 atgtgcttga tgttagtgaa tttagccatt tacgtaagtt taacggcatt cccaaagagc
      541 atttggggct atatttaaag aaatgccaat ggcatttgaa atagaatctc aaatttagat
      601 tttaagacaa ttagttaatg ggaatttggt ctggttatct agtacaaccc caaaagtttt
      661 tatataaaaa cagtttggta agttctcttc gtgaagtgct tatgttttgc cacaaaagtt
      721 ccataatcat ggcggcatca cccaagctcc atccttccaa gaaaatggca tctttgttgt
      781 ggttgaaaat cgactccata cgattttgga caagcatagg gatagatgtt ctgaaaaacg
      841 gcagcgcggg cattctccaa ccaccttccc aaatcttata atacaaaccc gaagaccttt
      901 gcaaaattcc cc
//
LOCUS       DAXGCP010000178          890 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.179, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000178 DAXGCP010000000
VERSION     DAXGCP010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 890)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.179"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..300
                     /locus_tag="ACFJCW_002213"
     CDS             <1..300
                     /locus_tag="ACFJCW_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HFC4152233.1"
                     /translation="RMTGKLKAAKARNQSLKDYLARNMQAAGITEIKADDGTFKASFR
                     KSEAVVILDEAQIPAEFMREAVKTEPDKTAIRKAIESGRQVAGAKIEGRKNLQIR"
     gene            352..567
                     /locus_tag="ACFJCW_002214"
     CDS             352..567
                     /locus_tag="ACFJCW_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152234.1"
                     /translation="MSYLEDVKNALRVIDNLCKEALKEPESLEGYIDEIRDKADEADT
                     SLEFLKDVINYGISDLKNVIEVFEDCV"
     gene            678..>890
                     /locus_tag="ACFJCW_002215"
     CDS             678..>890
                     /locus_tag="ACFJCW_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152235.1"
                     /translation="MQTVATKPTAKQMLAAKRAAKESTRQERAVKRAGTVKNVDRNRL
                     SARSKAQKENIARMLSGAKVSEDEALT"
BASE COUNT          314 a          178 c          235 g          163 t
ORIGIN      
        1 cggatgaccg ggaagctcaa ggcggcaaaa gcgcggaatc aaagcctgaa agactacttg
       61 gcgcgcaata tgcaggcggc gggcattacc gaaatcaaag cggacgacgg cacttttaaa
      121 gcctcgttcc gcaaatccga agccgtcgtg atcttagacg aagcacaaat ccccgccgaa
      181 tttatgcgtg aggccgtcaa aaccgaaccg gacaaaaccg ccatcagaaa agcgattgaa
      241 agcggtcggc aagtagcagg cgcgaagatt gaagggcgga agaatttgca gattagataa
      301 accgtagaag atgttgacga cagcatccca ttttgagtta aggagcaaaa aatgagctat
      361 ttggaagatg taaaaaacgc attaagggta atagataact tatgcaaaga agcattaaaa
      421 gagcctgaat cgttagaggg ttatatagac gaaattaggg ataaagcaga cgaagcggat
      481 acctctttgg aatttctaaa ggatgtaata aattatggta ttagcgattt aaaaaatgta
      541 attgaggtgt ttgaagattg cgtttgatat taatggaaca agacatgaac tatcaattta
      601 aattcggcga ccccgtgaga gatacagctt tatgattggg cattgagaga acggcatcaa
      661 aaaatcgaga aaacaaaatg caaacagtag caacaaaacc gacggcaaaa cagatgcttg
      721 ccgccaaacg cgcggcgaag gaatcaacgc ggcaggaacg cgccgtcaaa cgcgcgggaa
      781 cagtaaaaaa cgttgaccgg aaccggctgt ccgcccggtc aaaagcgcaa aaagaaaaca
      841 tcgcccggat gttgtcgggc gcaaaggtat cggaagacga agccctgacg
//
LOCUS       DAXGCP010000179          852 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.180, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000179 DAXGCP010000000
VERSION     DAXGCP010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..852
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.180"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          228 a          244 c          175 g          205 t
ORIGIN      
        1 gtatggcgga aaacctgcct tttcaaagtt ttattcatat tttattcctt aagtttgcct
       61 tcgcgggacg gcgcgccgcg aacgccgggg ttcggtaaac cgcccgattc cgcgcccgcc
      121 ggattgctga ttgaaaagct tacctcccca ttttaacttt gcgcacttat cacggtaaag
      181 cgttttttag caaaccgccg cagatgcccg accggtccgg attcccgcct gcgcgggaat
      241 gacggcatcg gtttgacggt atttaattga attgcggaaa ttgacggatt cagtgagatt
      301 ggcgggatga agcctaccct gtagcccgcc ttttatagcg gattaacaaa aaccggtacg
      361 ggttgccccg ccccggctca aagggaacgg ttccctaagg cgcccaagca ccgggcggat
      421 cggttccgta ccattcgtac tgcctgcggc ccgccgcctt gtcctgattt tcgttaatcc
      481 gctatgctta tacacaacca gccaaaagcc atcttattga aatatcataa gatttactca
      541 aaaatcttat tttctccacc acttatgcac aaactcggat acacactctg ccaatatgca
      601 gaaaaaaaga cattcgcgcc gacacctttt catccccaca agttccaaac acatttccgg
      661 cttaaatatc cacagcattc ccgttcttaa aggcaccggc agccattcgg taaagaaaag
      721 cgggatgtcg tccgcacaac aagcaaacta tccacaaaac ctattcccca cgaaaaacaa
      781 tccacaggta tgcacaaaag ggaatcctcc ttaccgacac ccttttaaaa cggcaattca
      841 gatgatttta aa
//
LOCUS       DAXGCP010000180          815 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.181, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000180 DAXGCP010000000
VERSION     DAXGCP010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.181"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(480..>815)
                     /locus_tag="ACFJCW_002216"
     CDS             complement(480..>815)
                     /locus_tag="ACFJCW_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152236.1"
                     /translation="DKVEVIAVGYRNTGKTIKISIEDVIHFRVVDESYFIDTFMDLIS
                     EDADRALLHENGGQSFFELLDERYAAWISKESYFPLNREFFKYYIFMFEQTFIEIIGS
                     SATYSIIES"
BASE COUNT          277 a          156 c          119 g          263 t
ORIGIN      
        1 aaaataagaa tattcattta ctaagttgtt atgatgaaaa agtaatttta ttaaaatgtt
       61 ttcataattt tctaggttca tttctagctc aatttaaaat gatttcattg ttgccgtacc
      121 aatgcgaaat ttaccatcga caaaatttcc cttcactgat acaggtaccc catcgcagag
      181 atgtaggtcg gatatttgta tccgacaaaa atatttgacg cgtttatcgt ttccgaaatg
      241 ccgctgttag aaaatgtcgg attcgagaat ccaacctacg gctatatccg taaagtctga
      301 ccattgttca atgcggaagg cgcgaatatt gcggacggaa tgtagaaacc aatatactta
      361 attgccatgc cattctcatc aaaatacctg tgctgtttaa agtgcgtggt tcattacacg
      421 agtaatttta ttttcaggct gcctgaaaga aagataggca acttattact catcttacgc
      481 tagctctcaa taattgaata cgttgcacta gaaccaatta tttctatgaa tgtttgctca
      541 aacataaaaa tatagtattt aaagaattct ctattcaaag gaaaataact ttctttcgat
      601 atccatgccg cataacgctc atcaagaagt tcgaaaaaag attgaccacc attttcatga
      661 agcaaagctc tatctgcatc ttccgaaatt aaatccataa aagtatctat aaaatacgat
      721 tcatcaacaa ccctaaaatg aataacatcc tcaatagaaa tttttatggt tttacccgta
      781 tttctataac caactgctat aacttctact ttatc
//
LOCUS       DAXGCP010000181          812 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.182, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000181 DAXGCP010000000
VERSION     DAXGCP010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.182"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            9..245
                     /locus_tag="ACFJCW_002217"
     CDS             9..245
                     /locus_tag="ACFJCW_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HFC4152237.1"
                     /translation="MAMSIQKAVDYFGNESRLARAIGVKQPTVWAWNKKGTPPPIIRC
                     VQIEKLTGGAVNRKDLRPDDWHLIWPELAGDQPK"
     gene            325..480
                     /locus_tag="ACFJCW_002218"
     CDS             325..480
                     /locus_tag="ACFJCW_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152238.1"
                     /translation="MKKQDRNRLSKKDRRLIKKAMLKAAAKGCDEVYKIAPGLKDGFE
                     LLGKQPD"
     gene            complement(457..645)
                     /locus_tag="ACFJCW_002219"
     CDS             complement(457..645)
                     /locus_tag="ACFJCW_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152239.1"
                     /translation="MPSDLSFILAKELIRSGSIRLSGSTAKGQAGELAVFIRTLHQKP
                     EESEPNTDDEYLIGLLSK"
BASE COUNT          232 a          175 c          233 g          172 t
ORIGIN      
        1 ttgagtaact ggctatgagt atccaaaaag cagttgatta ttttggtaat gaatcccgac
       61 ttgcacgggc gatcggagtt aaacaaccga cggtgtgggc ttggaataaa aaaggaacgc
      121 cgcccccgat cattcggtgc gtgcagattg aaaaattaac cggaggcgca gtgaatcgaa
      181 aagacttacg tcctgatgac tggcatctaa tctggccgga attggcaggc gaccaaccca
      241 aataaaaagc ccgtcgggtc agatgttaat tgatataacc gaattgaagc ggaagtcatc
      301 cgcaatttac cggaaaggaa aaaaatgaag aagcaggaca gaaaccgcct gtcgaagaaa
      361 gacagacggc tgattaaaaa ggcgatgctg aaagccgccg ccaaaggctg cgatgaggtt
      421 tacaaaatcg cgccgggttt gaaagacggc tttgaattac ttggaaagca gcccgattaa
      481 atattcgtca tcggtatttg gctccgattc ttcgggtttt tgatgaagtg ttcggatgaa
      541 taccgccaat tctccggctt gtcctttggc cgtactgccg cttaagcgga tagaaccgct
      601 gcggataagc tctttggcga gtatgaagga taagtcggac ggcatttttt tactccgtcg
      661 gccgttgtgt ggaaacccgg ttgcaacggg gtgatggcaa atcggaaaga cggctgaccg
      721 cccggacaga cgggcggccg ataaagaaaa acccgcacgg ggcgggtaat ccccctgaat
      781 tgcagggaag cggttcaggt aacggcgaaa gg
//
LOCUS       DAXGCP010000182          799 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.183, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000182 DAXGCP010000000
VERSION     DAXGCP010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..799
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.183"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>799
                     /locus_tag="ACFJCW_002220"
     CDS             <1..>799
                     /locus_tag="ACFJCW_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218290.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC4152240.1"
                     /translation="FLMGFQGVGIGAITDSAVSPVTDTAAQQTLQGINDLGKLSPEAQ
                     LAAASLLQDSAFAVKDGINSARQWADAHPNITATAQTALAVAEAATTVWRGKKVELNP
                     TKWDWVKNTGYKKPAARHMQTLDGEMAGGNKPAKQATPNGKAGVSTQQSLQNSLVPQK
                     NYTHTTYNGGSAITDGKYITDPLSMVRHKPDASSLDKIDSKSLFKSDVDVEKATLDAA
                     RYADKHNLWDSQNKAKVPTNDVVGYTDGKPTHIINIYRRKPNKDGIRP"
BASE COUNT          276 a          160 c          178 g          185 t
ORIGIN      
        1 cttttttaat gggttttcaa ggagtaggga ttggggcaat tacagacagt gcagtaagcc
       61 cggtcacaga tacagccgct cagcagactc tacaaggtat taatgattta ggaaaattaa
      121 gtccggaagc acaacttgct gccgcgagcc tattacagga cagtgctttt gcggtaaaag
      181 acggcatcaa ttccgccaga caatgggctg atgcccatcc gaatataaca gcaacagccc
      241 aaactgccct tgccgtagca gaggccgcaa ctacggtttg gagaggtaaa aaagtagaac
      301 ttaacccgac taaatgggat tgggttaaaa ataccggcta taaaaaacct gctgcccgcc
      361 atatgcagac tttagatggg gagatggcag gtgggaataa gccagcgaag caagctactc
      421 ctaatggcaa agctggcgtt tctacacaac aatctttgca aaatagtctc gttccacaaa
      481 aaaattatac gcatactacc tataatggtg gatcagctat tacagatggc aaatatatta
      541 ctgaccctct cagtatggta cgacacaaac ctgatgcatc tagtctagac aagatagata
      601 gcaaaagttt atttaaatca gatgttgatg tggaaaaagc tacattagat gctgctagat
      661 atgcagataa acataattta tgggatagtc aaaataaggc aaaagttcca acgaacgacg
      721 tagttggcta tacagacgga aaaccgacac atataattaa catttatcgt agaaagccga
      781 ataaagatgg gattagacc
//
LOCUS       DAXGCP010000183          791 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.184, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000183 DAXGCP010000000
VERSION     DAXGCP010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..791
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.184"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..667)
                     /locus_tag="ACFJCW_002221"
     CDS             complement(<1..667)
                     /locus_tag="ACFJCW_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding N-lobe domain-containing
                     protein"
                     /protein_id="HFC4152241.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVPSKKPEARKDQGGYGFAMRFKRRNWYPLSNPKENEIRLSEGDWEQTDNGNIKNPS
                     KQKNIINALSGNGGASLQDSSQQEGISKVTDYHDFKYVWSGFFYKQIGNTIIKRDDLP
                     SKIIEARNGPDGYIFYKGKDPSRKLPVSGEVTYKGTWDFLTDVQANQKFTELGDTSTK
                     PGDR"
BASE COUNT          220 a          174 c          139 g          258 t
ORIGIN      
        1 atcggtcgcc gggtttcgta gaagtatctc ctaactctgt aaatttctga tttgcttgca
       61 catcagttaa aaaatcccaa gtacctttgt acgtaacctc ccctgaaaca ggaagttttc
      121 tcgaaggatc tttgccttta taaaaaatat aaccgtcagg accgtttctg gcttcgatta
      181 ttttactagg taaatcgtct cttttaatta ttgtattccc aatctgttta taaaaaaaac
      241 ccgaccaaac gtatttgaaa tcgtgatagt ccgtaacctt agatataccc tcttgttgac
      301 tggaatcttg caatgatgcc cccccatttc cagataaggc attaataata tttttttgtt
      361 tggaagggtt tttgatatta ccattatccg tttgttccca atcaccttca gagagtctta
      421 tctcattttc tttaggattt gacagcggat accaattgcg ccgcttgaag cgcatcgcga
      481 aaccgtatcc gccttggtct tttcgggctt ccggtttttt ggaaggaaca tcttgatact
      541 ttggcgcggg acgcggggct tcggtatcga cagaatcaag atcgaaactg ccgcctccgc
      601 ccagacaagc actcaacaaa aacacgggca gcaccatagc agcctgattc accaatggat
      661 tgttcataac aaacccgatt caattaaaga atgataagga ttattatttt atttattttt
      721 aaaaaatttg caaatgcttt tttatatttt tagtaaataa accaaaatac cgtcattccc
      781 gcgctgcttt t
//
LOCUS       DAXGCP010000184          786 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.185, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000184 DAXGCP010000000
VERSION     DAXGCP010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..786
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.185"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..726
                     /locus_tag="ACFJCW_002222"
     CDS             <1..726
                     /locus_tag="ACFJCW_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HFC4152242.1"
                     /translation="AAQAASEGNGRGPYVQADLAYAYEHITHDYPEPTAPNKNKISTV
                     SDYFRNIRTHSVHPRVSVGYDFGGWRIAADYARYRKWNNNKYSVNTKEVLRNKDNGNR
                     TDRKTENQENGTFHAVSSLGLSAVYDFKLNDKFKPYIGARVAYGHVRHSIDSTKKTIE
                     VTTILHGADTKPTVYPGKSTQDAHHQSNSIRRVGLGVIAGVGFDITPKLTLDAGYRYH
                     NWGRLENTRFKTHEASLGMRYRF"
BASE COUNT          221 a          235 c          185 g          145 t
ORIGIN      
        1 gcagcgcagg cggcaagtga aggcaatggc cgcggcccgt atgtgcaggc ggatttagcc
       61 tacgcctacg aacacattac ccacgattat ccggaaccaa ccgctccaaa caagaacaaa
      121 ataagcacgg taagcgatta tttcagaaac atccgtacgc attccgtcca ccccagggtg
      181 tcggtcggct acgacttcgg cggctggagg atagcggcag attatgcccg ttacagaaag
      241 tggaacaaca ataaatattc cgtcaacaca aaagaggtgc taagaaacaa ggacaatggc
      301 aacaggacag accggaagac ggaaaatcag gaaaacggta cgttccacgc cgtttcttct
      361 ctcggcttgt ccgccgttta cgatttcaaa ctcaacgaca aattcaaacc ctatatcggt
      421 gcgcgcgtcg cctacggaca cgtcagacac agcatcgatt cgaccaaaaa aacaatagag
      481 gttactacca tcctccatgg tgctgacaca aaacctacgg tttatcctgg gaaaagtacg
      541 caagacgccc atcaccaaag caacagcatc cgccgcgtgg gcctcggtgt catcgccggc
      601 gtcggtttcg acatcacgcc caagctgacc ctggacgccg ggtaccgcta ccacaactgg
      661 ggacgcttgg aaaacacccg cttcaaaacc cacgaagcct cattgggcat gcgctaccgc
      721 ttctgattcc ccgataccga tgccgtctga accttcagac ggcattttta atcgcccgcc
      781 gtttac
//
LOCUS       DAXGCP010000185          732 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.186, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000185 DAXGCP010000000
VERSION     DAXGCP010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 732)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 732)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..732
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.186"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..196)
                     /locus_tag="ACFJCW_002223"
     CDS             complement(<1..196)
                     /locus_tag="ACFJCW_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152243.1"
                     /translation="MFLDDVNVFLDDLNTNPITDEWYMSNFADKHIKILESYEAFDIL
                     KQFVDYMIEEHDEKSEYEIME"
     gene            complement(199..483)
                     /locus_tag="ACFJCW_002224"
     CDS             complement(199..483)
                     /locus_tag="ACFJCW_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152244.1"
                     /translation="MAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQGKT
                     PARIPPMSDTKNGWLAKDGWVKRVQNINKVEIHYIENTRTGEKTDFKFKD"
     gene            complement(457..732)
                     /locus_tag="ACFJCW_002225"
                     /pseudo
     CDS             complement(457..732)
                     /locus_tag="ACFJCW_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503511.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
BASE COUNT          176 a          155 c          132 g          269 t
ORIGIN      
        1 tttccatgat ttcatattct gatttttcat catgttcttc aatcatgtaa tcaacaaatt
       61 gttttagaat atcaaaggct tcgtaacttt ccaaaatttt aatatgttta tcggcaaaat
      121 tggacatata ccattcgtca gtgattggat tggtatttaa atcatctaaa aaaacattta
      181 catcatctaa aaacatggct aatccttaaa cttgaaatct gttttctcac cggttcttgt
      241 attttcaatg taatgtatct caactttgtt tatattttga acgcgcttaa cccagccgtc
      301 ttttgccaac caaccatttt tagtatcgga cataggaggt attctcgcag gagttttgcc
      361 ctgtgggttt gccttaactt cttccattgc taattgttcc tttaaattat taggtattgt
      421 acgaccggtt gatttttcaa cagattgtgt ccctattttt aatgatttgt ttcccccagc
      481 catttccctg tctacagtct gcatatggcg ggcagtaggt ttttcatagc cggtatcttt
      541 aactcaatcc catttagtcg ggttaagttc tactttttta cctctccaaa ccgtacctgc
      601 ggcctctgct acggcaaggg cagtttgggc tgttgctgtt atattcggat gggcatcagc
      661 ccattgtctg gcggaattga tgccgtcttt taccgcaaag gcactgtcct gtaataggct
      721 cgcggcggca ag
//
LOCUS       DAXGCP010000186          628 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.187, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000186 DAXGCP010000000
VERSION     DAXGCP010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..628
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.187"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>628
                     /locus_tag="ACFJCW_002226"
     CDS             <1..>628
                     /locus_tag="ACFJCW_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC4152245.1"
                     /translation="GFQGLGVGAITDSAVSPVTYAAARKTLQGIHNLGNLSPEAQLAA
                     ASLLQDSAFAVKDGINSARQWADAHPNITATAQTALAVAEAAGTVWGGKKVELNPTKW
                     DWVKNTGYETPAVRTMHTLDGEMAGGNRPPKSITSEGKANAATYPKLVNQLNEQNLNN
                     IAAQDPRLSLAIHEGKKNFPIGTATYEEADRLGKIWVGEGARQTSGGGW"
BASE COUNT          198 a          124 c          169 g          137 t
ORIGIN      
        1 gggttttcag ggattgggag ttggggcaat tacagacagt gcggtaagcc cggtaaccta
       61 tgcggcagca cggaaaactt tacagggtat tcacaattta ggaaatttaa gtccggaagc
      121 acaacttgcc gccgcgagcc tattacagga cagtgccttt gcggtaaaag acggcatcaa
      181 ttccgccaga caatgggctg atgcccatcc gaatataaca gcaacagccc aaactgccct
      241 tgccgtagca gaggctgcag gtacggtttg gggaggtaaa aaagtagaac ttaacccgac
      301 caaatgggat tgggttaaaa ataccggcta tgaaacacct gctgttcgca ccatgcatac
      361 tttggatggg gagatggccg gtgggaatag accgcctaaa tctataacgt cggaaggaaa
      421 agctaatgct gcaacctatc ctaagttggt taatcagcta aatgagcaaa acttaaataa
      481 cattgcggct caagatccaa gattgagtct agctattcat gagggtaaaa aaaattttcc
      541 aataggaact gcaacttatg aagaggcaga tagactaggt aaaatttggg ttggtgaggg
      601 tgcaagacaa actagtggag gcggatgg
//
LOCUS       DAXGCP010000187          627 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.188, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000187 DAXGCP010000000
VERSION     DAXGCP010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..627
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.188"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          233 a          118 c          106 g          170 t
ORIGIN      
        1 tacgtttacg acaattctaa attaacaaat gagcaaattg atcgcttaaa aaaaacttag
       61 agataaaagc agcgaatact ggaaacaaga aacttatctt ttaaaaccga cgaatggtag
      121 ctctcagaac tctctcaaag ttcccgcact atcctctaaa acacaccaat tcgaaaacat
      181 caacaactca aaaaagattt ctttttatga caaggaatac actgaagatt accttgttgg
      241 cttcgcccga ggtttcgggg ttgaaaaaag aaatggggaa gaagaaaaac cactccggca
      301 atattttaag gactgtgtaa atactgagaa ttccaataat gataattgta aaatttcatc
      361 cttcggaaac tatggcccaa tattaataaa gagcgatatt ttcgccttag catcacaaat
      421 aaaaaatagc catatcaaca gcgaaatttt atctgtaggt aattatatcg aatggcttcg
      481 cccaacactt aataagctta ctggttggca agagcatcta tatgctggtt tagatccatt
      541 ccactatatt gaggttacag acaactcgca cgttatcgga caaacgattg atttgggagc
      601 attagaatta acaaattctc tatggga
//
LOCUS       DAXGCP010000188          607 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.189, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000188 DAXGCP010000000
VERSION     DAXGCP010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 607)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 607)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..607
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.189"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..216
                     /locus_tag="ACFJCW_002227"
     CDS             <1..216
                     /locus_tag="ACFJCW_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152246.1"
                     /translation="REIKVPFIALYAIFFTLIYTVALLFLSLIYWVNGAEIAWKGIGI
                     FSMSVSFCIVFCLYLVDKAGRCKDKKQ"
BASE COUNT          175 a           81 c          152 g          199 t
ORIGIN      
        1 cgtgagataa aagttccctt tattgcgctt tacgctatat tttttacgtt gatttatact
       61 gtggctttgt tgtttctcag tctgatctat tgggtcaatg gtgcggagat tgcatggaag
      121 gggataggta ttttcagtat gtcggtcagt ttttgtatag tcttctgtct ttatttggtt
      181 gacaaggcag gaagatgtaa ggataagaaa caatagggat cagatgcggc agcaaacgta
      241 gattgggtct aggctcaacc tgcgtttgct gcatctttgg aagaaatagt ggattcgaaa
      301 aaataggaag aattctgatt aatggtatgc gaggtgtagc agtgggggct gttgctggtg
      361 gcataactgg ttatgcaggt tctacgggta agaacactga cattcgccgt taaataataa
      421 ataaaccaac ttccaaccaa acctgctatc ggtttggttg gaagtgagag gaggtaaggt
      481 agtgtttgct gttattttct tttcgacatt gggctgtatt ttagcatgga taagagatat
      541 tcctaaaata aaatcaaaaa aaattttggc aagatcctta tatattatag gaataataaa
      601 tgtaata
//
LOCUS       DAXGCP010000189          601 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.190, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000189 DAXGCP010000000
VERSION     DAXGCP010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 601)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 601)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..601
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.190"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..432
                     /locus_tag="ACFJCW_002228"
     CDS             <1..432
                     /locus_tag="ACFJCW_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017147002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HFC4152247.1"
                     /translation="ISYKNFSTVKPKVIAKGTINGKTFRDVNQSAKIGSPDSPTLIAQ
                     RVNAKIQADGKPRPNATVANSHAEIGVIQQAYNAGETKGASMTMTVSGKDVCGYCKGD
                     IAAAAQASGLKSLTVNATDNVTGKNKTYYWTPGMKSIKEKK"
BASE COUNT          221 a           99 c          112 g          169 t
ORIGIN      
        1 attagctata aaaacttttc tactgtcaaa ccaaaagtaa ttgccaaagg aacgattaat
       61 ggaaagactt ttagagatgt taatcaaagt gcaaaaattg gatcgcctga ttcacctaca
      121 ttaatagccc aacgagttaa tgcaaaaatc caagccgacg gtaaacctcg tccgaatgca
      181 accgttgcta attcacatgc tgaaattggt gttatccagc aggcttataa tgcaggtgaa
      241 acgaaagggg catctatgac aatgacagtt tcaggaaaag atgtttgcgg ttattgtaaa
      301 ggagatattg cagctgctgc tcaagcttct ggactgaaat cactgactgt taatgcgaca
      361 gataatgtaa caggaaaaaa taaaacttac tattggacgc ctggtatgaa atcaattaag
      421 gagaaaaaat gaaaacatca acaattgttt ttggtggatt ttttattaca gataatggag
      481 aacgaatcca aatccctatt ttagaaaatc ctaacattaa agaaataaat aacttttttt
      541 ctgtatcaaa ttttgaaaaa aaagccggag tccttgtttt cagaattatt cctgagcctg
      601 a
//
LOCUS       DAXGCP010000190          516 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.191, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000190 DAXGCP010000000
VERSION     DAXGCP010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 516)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 516)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..516
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.191"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>516
                     /locus_tag="ACFJCW_002229"
     CDS             <1..>516
                     /locus_tag="ACFJCW_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713004.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HFC4152248.1"
                     /translation="ATAQTALAVAEAAGTVWGGKKVELNPAKWDWVKNNGYKKPTARH
                     MQTKALGTVDEIGNTVQQVGKQTSGQKTSGGNPAIDSDPYSPSSVSARIEAGKVRSDL
                     QIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQTRPNGTITGNLPDG
                     RAVNVRNDSSGG"
BASE COUNT          168 a           97 c          136 g          115 t
ORIGIN      
        1 gcaacagccc aaactgccct tgccgtagca gaggctgcag gtacggtttg gggcggtaaa
       61 aaagtagaac ttaacccggc caaatgggat tgggttaaaa ataacggtta taaaaaacct
      121 actgcccgcc atatgcagac taaggcgtta ggtacggtag atgaaattgg caatacagta
      181 cagcaggttg ggaaacagac tagcggacaa aaaaccagcg gtggtaatcc tgcgattgat
      241 agcgacccct atagcccgag tagtgtgtca gctcgtatag aagccggtaa ggtgcgcagt
      301 gatttacaaa tcaaagacat tttgagcaat actactcaaa ggagtaaaac aaaaggtccc
      361 gctgttcagt atgataaagt gggggattac aatgacgcac taaatgattt taatagtctg
      421 aatgttcgaa atgtacaaac acgtcctaat ggaacgataa cgggcaattt acctgatggg
      481 cgtgcggtta atgttcgtaa tgatagcagt ggtgga
//
LOCUS       DAXGCP010000191          496 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.192, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000191 DAXGCP010000000
VERSION     DAXGCP010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.192"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..207)
                     /locus_tag="ACFJCW_002230"
     CDS             complement(<1..207)
                     /locus_tag="ACFJCW_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4152249.1"
                     /translation="MSEFKDRLKEARKNKNLSQENLAKLAEVSQSTIAALESGRNKKA
                     TNIAKLAKILDVSAFWLETGEGSRN"
BASE COUNT          140 a           91 c          100 g          165 t
ORIGIN      
        1 atttcggctg ccttcgcctg tctcaagcca aaaagccgat acatctaaaa ttttggcaag
       61 tttcgcgata ttggtagcct ttttattcct acccgattcc aacgctgcga tggttgattg
      121 acttacttct gccagttttg ccaaattttc ttgacttaaa tttttatttt tccgcgcctc
      181 tttcaggcgg tctttaaatt cagacatatc aaactcctta taacgcaacg ggtactattg
      241 tactttttat tataagtatt ttggtgcttg cattatgagt acgtttgtac ttataatgtt
      301 caaaatttga gctggggcaa atatggacga accaagagat ttagtgttgt ttttgaaaga
      361 aaaaatgagc agcgcggcta tcgcgaaaga ggtcggctgc tcgaaagagt ttattaataa
      421 aatcggtaac ggcgagcgaa aaaacccgcg ttatcaaatt gttgattctt taaggagttt
      481 atacaggaag aatcaa
//
LOCUS       DAXGCP010000192          453 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.193, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000192 DAXGCP010000000
VERSION     DAXGCP010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..453
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.193"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            160..267
                     /locus_tag="ACFJCW_002231"
                     /pseudo
     CDS             160..267
                     /locus_tag="ACFJCW_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(330..414)
                     /locus_tag="ACFJCW_002232"
     tRNA            complement(330..414)
                     /locus_tag="ACFJCW_002232"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(378..380),aa:Leu,seq:caa)
BASE COUNT          140 a           95 c           98 g          120 t
ORIGIN      
        1 cccaataaag actcgggata ttgattgaac ttgattttat ttttgatata tcaaaaatat
       61 tcccaaccat acttcctgaa aatggctcat tgcaccggac tgtattggac ggcattgaca
      121 gaaccaagag ggctaacaac gacttaaata tattgattgt atagtggatt aaatttaaat
      181 caggacaaaa cgacgaagcc gcagacagta cagatggtac ggcaaggcga ggcaacgccg
      241 taccggttta aatttaatcc gctatattta gtcttatcta tttcattaaa cagcaataga
      301 caaaaaaata accgctccaa aagcggttgt ggtgcccagg gtcgggctcg aaccgacaca
      361 ccttgcggcg ggggattttg agtcccctgc gtctaccaat ttcgccacct gggctggtga
      421 agaaattgcc attataatgg cttttgagat tct
//
LOCUS       DAXGCP010000193          452 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.194, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000193 DAXGCP010000000
VERSION     DAXGCP010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..452
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.194"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..>452
                     /locus_tag="ACFJCW_002233"
     CDS             <1..>452
                     /locus_tag="ACFJCW_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HFC4152250.1"
                     /translation="LPHEVKDIHRPMMWSSNDPLPDDDYVFVPYLKESCFKGGAGAYE
                     IPDYNGYRLPFGKSTLRRKGINPDNVFCCTLTGDSMEEKIAEDAAIAVDTGETAIRDG
                     KIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYPDETAPLDSLSVIG"
BASE COUNT          117 a          149 c          114 g           72 t
ORIGIN      
        1 acctgcccca cgaagtcaaa gacatccacc gcccgatgat gtggagcagc aacgacccgc
       61 tgcccgacga tgattatgtt ttcgtcccct acctcaaaga gagctgcttc aaaggcgggg
      121 cgggcgcgta tgaaatcccc gactacaacg gctaccgcct gccgttcggc aaatcaacgt
      181 taaggcgcaa aggcatcaac cccgacaacg tcttctgctg caccctgacc ggcgacagca
      241 tggaggaaaa aatcgcagaa gacgcggcaa tcgccgtaga tacgggcgaa accgccatac
      301 gcgacggcaa aatatacgcc tttgcccaag acggcatgtt ccgcgtcaaa tacctgatac
      361 ggcagcccgg caacagcgtg ctgatacgca gccacaacag cggcttctat cccgacgaaa
      421 ccgccccttt ggacagcctg tccgttatcg gc
//
LOCUS       DAXGCP010000194          447 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.195, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000194 DAXGCP010000000
VERSION     DAXGCP010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.195"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..246)
                     /locus_tag="ACFJCW_002234"
     CDS             complement(<1..246)
                     /locus_tag="ACFJCW_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HFC4152251.1"
                     /translation="MRTHIRTCVYHDSGTKGSNTASGISGTAAGAAEQAFFSAAKTAN
                     RSASAASANAPPHPDKPENGRKPMTFQGHNNRKKAGGY"
     gene            complement(243..>447)
                     /locus_tag="ACFJCW_002235"
     CDS             complement(243..>447)
                     /locus_tag="ACFJCW_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152252.1"
                     /translation="RRISDVRRPMMKMLVADKGGALVRAVKDSEDVIRHCDNGAGFSC
                     FNWTEHFKRTANLISLMHREAAA"
BASE COUNT           57 a          132 c          137 g          121 t
ORIGIN      
        1 gtagccgccg gcttttttac ggttgttgtg tccttgaaac gtcatgggtt ttcgtccgtt
       61 ctctggcttg tccgggtgtg gcggagcgtt tgcggatgcg gctgacgcgc tgcggtttgc
      121 cgtcttcgcc gcgctgaaaa acgcttgttc cgccgcgccg gcagccgtgc cgcttatgcc
      181 tgatgccgtg tttgagcctt ttgtgccgga atcgtgatac acgcaggtcc ggatgtgcgt
      241 cctcatgccg ccgcttccct gtgcatgagg ctgatcaggt ttgccgtccg tttgaaatgt
      301 tcggtccagt tgaagcagct gaagccggcg ccgttgtcgc aatgccggat gacgtcttcc
      361 gagtctttta cggcccggac caacgcgccg cctttgtccg caacaagcat tttcatcatc
      421 ggccggcgca cgtcgcttat ccgtcgg
//
LOCUS       DAXGCP010000195          432 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.196, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000195 DAXGCP010000000
VERSION     DAXGCP010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.196"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            <1..395
                     /locus_tag="ACFJCW_002236"
     CDS             <1..395
                     /locus_tag="ACFJCW_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="septum formation inhibitor Maf"
                     /protein_id="HFC4152253.1"
                     /translation="GKKVELNPTKWDWVKNTGYKKPAARHMQTLDGEMAGGNKPVVKS
                     IRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPNGEVIRTQRVPRTDG
                     VQGKYPQRQDYEGNPLPNNHHHSGYFVK"
BASE COUNT          159 a           75 c           97 g          101 t
ORIGIN      
        1 gaggtaaaaa agtagaactt aacccgacca aatgggattg ggttaaaaat accggctata
       61 aaaaacctgc tgcccgccat atgcagactt tagatgggga gatggcagga ggaaacaagc
      121 cagttgttaa atctattaga ccaactacgc gagatgaatt acgtcaagca ttgcaagaac
      181 aaggttttag acgtactggt tcagatgcgg ctcaatatga aacatggaaa ggtcctgatg
      241 gcgtgaaaat agatattcgt ccaaatggag aggttataag aacccaaaga gtgccgcgaa
      301 ccgatggtgt acagggaaaa tatccgcaac gacaagatta tgaaggcaat ccattgccaa
      361 ataatcatca tcattctgga tattttgtca aatgaaaaaa aatatttttc acaatgtaag
      421 cctttatgaa at
//
LOCUS       DAXGCP010000196          415 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.197, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000196 DAXGCP010000000
VERSION     DAXGCP010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 415)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 415)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..415
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.197"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          129 a           76 c           59 g          151 t
ORIGIN      
        1 ccgttaggga tatttctaac ctgcttattt tcccttcact gtatttacct gataaatagc
       61 ctaaaaagct gcaatcaaat catctatttt aaaaatttct gtaaaaacag gtaatgcctt
      121 taattcatta cctgttttgc cattatttat ctatgatata agcgtctctt acccttcagc
      181 ctctttggga aatcaaagcc tgcttagaac gtatgttgca cacccaattt caataggtaa
      241 atcagattgc aaatccagca atttgaatat tgtcattgtt ccgtgcaaaa ggaatcttta
      301 ttgatgtgtt gtgtactggg tttcagcttg gctttttaga taatcttttc acaagagcat
      361 acatcaatac tgtccaaaaa aaagatttga taaatatatt gcaacatatt ttatt
//
LOCUS       DAXGCP010000197          412 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.198, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000197 DAXGCP010000000
VERSION     DAXGCP010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.198"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            311..>412
                     /locus_tag="ACFJCW_002237"
     CDS             311..>412
                     /locus_tag="ACFJCW_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HFC4152254.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDY"
BASE COUNT          144 a          110 c           62 g           96 t
ORIGIN      
        1 aaattccgac ccaatcaaca cacccgatac cccatgccaa taaaaaagta acgaaaatcg
       61 gcactaaaac tgacaatttt cgacactgcc gccccctact tccgcaaacc acacccacct
      121 aaaagaaaat acaaaataaa aacaattata tagagataaa cgcataaaat ttcacctcaa
      181 aacataaaat cggcacgaat cttgctttat aattcgcagt tgtcgcaaca aaaaaccgat
      241 ggttaaatac attgcatgat gccgatggcg taagcctgag gcatttcccc tttcaattag
      301 gagtaatttt atgaataccc ttcaaaaagg ctttaccctt atcgagctga tgattgtgat
      361 cgccatcgtc ggcattttgg cggcagtcgc ccttcccgcc taccaagact ac
//
LOCUS       DAXGCP010000198          412 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.199, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000198 DAXGCP010000000
VERSION     DAXGCP010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..412
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.199"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
BASE COUNT          135 a           73 c           80 g          124 t
ORIGIN      
        1 atgcccatca tttcatgatg aacatgatac gcttgtttgt tcagtgcaag atttttatgt
       61 aaatactgtt taactagcaa gcgcaggctg gattaaaacc taaatcattg ataaaaaaca
      121 taaaacaagc atcctgaaat ttttcaggct gcttttttgt tgggtttggt aacccaatct
      181 actcgctgaa aattagcaga ggacgtaaat ggctatttat gatttaaacg aaatcgtaac
      241 ccgtgctgca ttaggtatat ataaaggaaa atggcgaaac atggattttg agcaagttct
      301 acaaaacatt gttcagcaac cgtaggtcgg attctcgaat ccgacatttt tcaacagcgg
      361 catttcggaa acgatagacg cgtcaaatat ttttgtcgga tacaagtatc ca
//
LOCUS       DAXGCP010000199          397 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.denovo.200, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000199 DAXGCP010000000
VERSION     DAXGCP010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..397
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.denovo.200"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(<1..395)
                     /locus_tag="ACFJCW_002238"
     CDS             complement(<1..395)
                     /locus_tag="ACFJCW_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152255.1"
                     /translation="MQDMRYACNQELINFAEHIVKQVQRLGLYCNTDDPANEESVLFA
                     CREASQAVAQWTKDFDDLSPNQRQLVLRPLSNLFAAYEEFLKDAPARLIAEVSAYSLA
                     VRVAKKAMAFLELDGGLISAVGKVVNGADS"
BASE COUNT           83 a          112 c          111 g           91 t
ORIGIN      
        1 gaatccgcgc cgttgacgac tttgccgacc gccgaaatca aaccgccgtc aagttctaaa
       61 aacgccatgg ctttcttggc aacccgcacg gccaatgagt atgccgatac ttcggctatc
      121 agccgtgcag gcgcgtcttt cagaaattct tcgtacgcgg cgaagagatt tgacagcgga
      181 cgcagcacga gttggcgctg attcgggcta aggtcgtcga aatccttagt ccattgcgcg
      241 accgcctgcg atgcttcgcg gcaggcaaac agtacgcttt cctcgttcgc ggggtcgtcc
      301 gtgttgcagt acaggcccaa gcgttgcacc tgtttgacga tatgttcggc gaagttgatt
      361 aactcctgat tgcaggcata gcgcatatcc tgcaggg
//
LOCUS       DAXGCP010000200         6332 bp    DNA     linear   BCT 26-SEP-2024
DEFINITION  TPA_asm: Neisseria gonorrhoeae isolate MA12
            SAMEA113994124-rid23199323.guided.104, whole genome shotgun
            sequence.
ACCESSION   DAXGCP010000200 DAXGCP010000000
VERSION     DAXGCP010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA113994124
            Sequence Read Archive: ERR11669164
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria gonorrhoeae
  ORGANISM  Neisseria gonorrhoeae
            Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales;
            Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (05-SEP-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 05-SEP-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002363815.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002363815.1
            Genome Coverage       :: 58x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 09/16/2024 21:54:11
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,246
            CDSs (total)                      :: 2,192
            Genes (coding)                    :: 1,994
            CDSs (with protein)               :: 1,994
            Genes (RNA)                       :: 54
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 47
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 198
            CDSs (without protein)            :: 198
            Pseudo Genes (ambiguous residues) :: 0 of 198
            Pseudo Genes (frameshifted)       :: 119 of 198
            Pseudo Genes (incomplete)         :: 91 of 198
            Pseudo Genes (internal stop)      :: 44 of 198
            Pseudo Genes (multiple problems)  :: 53 of 198
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6332
                     /organism="Neisseria gonorrhoeae"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA113994124-rid23199323.guided.104"
                     /isolate="MA12"
                     /isolation_source="clinical"
                     /host="Homo sapiens"
                     /db_xref="taxon:485"
                     /geo_loc_name="Brazil"
                     /collection_date="2016-01-01"
     gene            complement(144..1352)
                     /locus_tag="ACFJCW_002239"
     CDS             complement(144..1352)
                     /locus_tag="ACFJCW_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="zeta toxin family protein"
                     /protein_id="HFC4152256.1"
                     /translation="MIEYTPLSAEGKARILNGFMKPRLSRTQSVEQPKIVLVGAQPGA
                     GKSKAASLAKSELRQEGGYIHVDADIMRALIPAPEGVVYSSEQTQKDAGALAISVRNS
                     AKENRRNIVEEGTFRNAASISQFIRDRKSEGYGVEMLAVATASEESVAGIFKRYEEQH
                     AKGVSQPRFVEESYHNEAMAGFKDTLSQCESSFDRVRVTNRAGDILYDSLNRRQNQYE
                     TAKDALSAYQEITPKRLKQVVKAWDEIQLQAESRSIDPIPNYLGMVKQHSEAIYQRVE
                     EIYRQERVVANSEGATLQRKSGDTWQDIEKAEAKGMKAGIHMLGTAKPAKSGREYSGE
                     IVHKDEASVFQKTDQGLIRHKAVQGMAEGKFSSLSEQVEIGQKVSIKREGNELSVKPA
                     DASLKKTMKR"
     gene            complement(1349..1603)
                     /locus_tag="ACFJCW_002240"
     CDS             complement(1349..1603)
                     /locus_tag="ACFJCW_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152257.1"
                     /translation="MQMQETIPGINYEVALELLGDSMRPLIQARESEFVKDKPNQAFI
                     EYCTARLEAIDMLRDSLSPEDTDIIARIFNPDDQTVGRVK"
     gene            complement(1980..2495)
                     /locus_tag="ACFJCW_002241"
     CDS             complement(1980..2495)
                     /locus_tag="ACFJCW_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152258.1"
                     /translation="MKTVQEYEIIIRLTKENGRYGAAAETVSGGLLESVPPLSAAGSD
                     ALYALLHALALKNNFSGCLKEAERQESVKNIEAKIEEKMKPIELQYYSSDMSVGEFNA
                     YLTVKNLAKPTFISHVDIDEDDKMFIANLAKSIASEYKSLFHLDVNRQTIEKALLRYL
                     EVCVSCNSAQD"
     gene            2890..3006
                     /locus_tag="ACFJCW_002242"
     CDS             2890..3006
                     /locus_tag="ACFJCW_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001814923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance determinant leader
                     peptide"
                     /protein_id="HFC4152259.1"
                     /translation="MILKYPENICMLCIPMVMHKNPSDKSIYHWDFYALLGF"
     gene            3022..4941
                     /gene="tet(M)"
                     /locus_tag="ACFJCW_002243"
     CDS             3022..4941
                     /gene="tet(M)"
                     /locus_tag="ACFJCW_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011117014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance ribosomal protection
                     protein Tet(M)"
                     /protein_id="HFC4152260.1"
                     /translation="MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTD
                     NTLLERQRGITIQTGITSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAK
                     DGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVEL
                     YPNMCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYH
                     GSAKSNIGIDNLIEVITNKFYSSTHRGPSELCGKVFKIEYSEKRQRLAYIRLYSGVLH
                     LRDSVRISEKEKIKITEMYTSINGELCKIDKAYSGEIVILQNEFLKLNSVLGDTKLLP
                     QRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISDSDPLLRYYVDSTTHEIILSFLG
                     KVQMEVISALLQEKYHVEIELKEPTVIYMERPLKNAEYTIHIEVPPNPFWASIGLSVS
                     PLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYS
                     PVSTPADFRMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYTDAPKYCANIV
                     DTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRP
                     NSRIDKVRYMFNKIT"
     gene            5060..5227
                     /locus_tag="ACFJCW_002244"
     CDS             5060..5227
                     /locus_tag="ACFJCW_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002319681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine-rich KTR domain-containing protein"
                     /protein_id="HFC4152261.1"
                     /translation="MCPVCGNKTRLKIREDTELKKFPLYCPKCRQENLIEIKQFKVTV
                     ITEPDAKTQSR"
     gene            complement(5287..5640)
                     /locus_tag="ACFJCW_002245"
     CDS             complement(5287..5640)
                     /locus_tag="ACFJCW_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001227347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HFC4152262.1"
                     /translation="MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTN
                     IENKGQHPSIQVLYDLVSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLM
                     ESLASGINEARNIED"
     gene            5921..>6332
                     /locus_tag="ACFJCW_002246"
     CDS             5921..>6332
                     /locus_tag="ACFJCW_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HFC4152263.1"
                     /translation="MPHEQMIDAFSAVIQNSLSLYEEQTPIYYYLTICGSWVLTALGI
                     LSLVSVFFTIKQKKPYRFIVPILFLWLGYESIHMPRPNLAVFYGYNLAQLSYPANENP
                     NSFLHLTDGSNPICCFIGEDEYLQAKRLGFKEYAD"
BASE COUNT         1840 a         1288 c         1205 g         1999 t
ORIGIN      
        1 ttttccactt ctttgcggaa ggcttcgtct gtcatcatcc tgcggttttt ttcgcaagcc
       61 tcttttatca ttctgatagc attactttct tggggctcaa ctttattcat aataaaatcc
      121 taatcttaat tttatattac tcatcatcgc ttcatcgttt tctttaatga ggcatctgcc
      181 ggtttaacgg acaattcatt tccttcccgc ttaatagaaa ccttctgacc aatttccacc
      241 tgttcggaca aactagaaaa ctttccttcc gccataccct gaaccgcctt atggcgtatc
      301 agaccttggt cagtcttctg gaaaaccgat gcctcgtctt tatggacaat ctctccgctg
      361 tattccctgc cggatttagc cggtttcgcc gtgccaagca tgtgaatacc agctttcatc
      421 cccttggctt cagccttctc aatatcctgc catgtgtcgc ctgatttgcg ttgcagtgtt
      481 gccccttctg aattagccac caccctttcc tgacggtaaa tctcttccac acgctgataa
      541 attgcttcac tatgctgttt gaccatgccg agataattag gtattggatc gatactgcgg
      601 ctttctgcct gaagctgtat ctcgtcccat gcttttacaa cctgtttcaa ccgtttaggg
      661 gttatttcct gataagccga tagtgcatct tttgccgttt catactggtt ttgtcgccga
      721 ttcaaactgt cataaaggat gtctcctgcg cggttggtaa cacgaaccct gtcaaaactt
      781 gattcacatt gagacaacgt atccttgaat ccagccattg cctcgttatg gtacgactct
      841 tcaacaaatc taggctgtga aacacctttg gcatgttgtt cctcataacg cttaaaaatc
      901 ccggctacac tctcttcaga agcagtggct accgccagca tttctacccc gtacccttct
      961 gattttctat cacggataaa ttggctgata cttgcagcat ttctaaatgt cccctcctcc
     1021 acaatattcc gccggttttc ttttgcacta ttccgaacac taatggccaa agcaccggca
     1081 tctttctgag tttgttcaga cgaatacacc accccctccg gcgcaggaat cagtgcacgc
     1141 ataatatctg catccacatg gatatatccg ccttcttggc gtaactcgct tttagctaaa
     1201 gaagctgcct tactcttacc cgctccgggt tgtgccccaa ctagaacaat tttgggttgc
     1261 tccacacttt gcgttctaga taaacgtggc ttcatgaaac cattcagaat tcttgcctta
     1321 ccttcggcac ttaaaggggt gtactcaatc attttacacg tccaactgtt tggtcatccg
     1381 gattgaaaat acgcgcgata atatctgtgt cctccggaga gaggctgtca cgcaacatat
     1441 cgatagcctc aagccttgct gtacagtatt cgataaacgc ttggtttggt ttatccttta
     1501 caaactcgga ctctcttgcc tgaattaatg ggcgcatcga atctcccaac aactccaaag
     1561 ccacttcata attgatacca ggaatagttt cttgcatttg catcttggct tcctccaaaa
     1621 gttatccaca aattttgtta gtaagctgcc catatcgcca gcctgccaca tataataaat
     1681 tgaatcttcg tcatcaaacc gtttttgcct gctttttaag caacatggtt caaaacctat
     1741 gtttgaataa taagccagtt caaaataaat aacaacgttt ttgacctata cttccagacc
     1801 ttaacgaaac atggttcata aagtacactt tttgcaccta cttatctaag ttacccacct
     1861 cttaatcaag atttggccat tgcccaccat atcccataat gtgtagaaac cagtagcgtt
     1921 gggtggatga cggcgtttcg ggttttccgc aggcggcaga cagcctgcaa tggtagtggc
     1981 taatcctgcg cgctattgca tgagacacaa acttcaagat agcgcagtaa ggctttttct
     2041 atcgtttgtc gattaacatc taggtggaaa agagacttat attcggatgc aatgcttttt
     2101 gccagattgg caataaacat cttgtcatct tcatctatat caacatggct gataaaagtc
     2161 ggtttggcca aattcttgac agtgagatag gcattgaatt ctccaacact catatccgag
     2221 gaataatatt gcagctctat cggtttcatt ttttcttcga ttttggcttc aatattcttc
     2281 accgattcct gccgttccgc ttctttcagg cagcctgaaa aattgttttt cagtgccaat
     2341 gcgtgcagca gagcgtacag ggcatcgcta ccggctgccg acagcggagg cacggattcg
     2401 agcagtccgc cggagacggt ttcggctgcc gcaccgtagc ggccgttctc tttcgtcagg
     2461 cggataatga tttcgtattc ttggacggtt ttcatgttca tactcccagt tgtctttgtt
     2521 cagtctgtgc taacggcgta tccagccgta ctccggcggc ggcatcctgc ccgactctct
     2581 ttcacgttta taattatagg ataatttgtc ctacttgtca aataaatttt agccgctaaa
     2641 tttttactct cgcttattta ttcattataa taaattaatc gttattttgt ttttgataaa
     2701 aaattggaga ttcctttaca aatatgctct tacgtgctat tatttaagta tctatttaaa
     2761 aggagttaat aaatatgcgg caaggtattc ttaaataaac tgtcaatttg atagtgggaa
     2821 caaataattg gatgtccttt tttaggaggg cttagttttt tgtacccagt ttaagaatac
     2881 ctttatcatg tgattctaaa gtatccagag aatatctgta tgctttgtat acctatggtt
     2941 atgcataaaa atcccagtga taaaagtatt tatcactggg atttttatgc ccttttgggt
     3001 ttttgaatgg aggaaaatca catgaaaatt attaatattg gagttttagc tcatgttgat
     3061 gcaggaaaaa ctaccttaac agaaagctta ttatataaca gtggagcgat tacagaatta
     3121 ggaagcgtgg acaaaggtac aacgaggacg gataatacgc ttttagaacg tcagagagga
     3181 attacaattc agacaggaat aacctctttt cagtgggaaa atacgaaggt gaacatcata
     3241 gacacaccag gacatatgga tttcttagca gaagtatatc gttcattatc agttttagat
     3301 ggggcaattc tactgatttc tgcaaaagat ggcgtacaag cacaaactcg tatattattt
     3361 catgcactta ggaaaatggg gattcccaca atctttttta tcaataagat tgaccaaaat
     3421 ggaattgatt tatcaacggt ttatcaggat attaaagaga aactttctgc cgaaattgta
     3481 atcaaacaga aggtagaact gtatcctaat atgtgtgtga cgaactttac cgaatctgaa
     3541 caatgggata cggtaataga gggaaacgat gaccttttag agaaatatat gtccggtaaa
     3601 tcattagaag cattggaact cgaacaagag gaaagcataa gatttcagaa ttgttctctg
     3661 ttccctcttt atcatggaag tgcaaaaagt aatataggga ttgataacct tatagaagtt
     3721 attactaata aattttattc atcaacacat cgaggtccgt ctgaactttg cggaaaagtt
     3781 ttcaaaattg agtattcgga aaaaagacag cgtcttgcat atatacgtct ttatagtggc
     3841 gtactgcatt tgcgagattc ggttagaata tcggaaaagg aaaaaataaa aattacagaa
     3901 atgtatactt caataaatgg tgaattatgt aaaattgata aggcttattc cggggaaatt
     3961 gttattttgc agaatgagtt tttgaagtta aatagtgttc ttggagatac aaagctattg
     4021 ccacagagaa aaaagattga aaatccgcac cctctactac aaacaactgt tgaaccgagt
     4081 aaacctgaac agagagaaat gttgcttgat gcccttttgg aaatctcaga tagtgatccg
     4141 cttctacgat attacgtgga ttctacgaca catgaaatta tactttcttt cttagggaaa
     4201 gtacaaatgg aagtgattag tgcactgttg caagaaaagt atcatgtgga gatagaacta
     4261 aaagagccta cagtcattta tatggagaga ccgttaaaaa atgcagaata taccattcac
     4321 atcgaagtgc cgccaaatcc tttctgggct tccattggtt tatctgtatc accgcttccg
     4381 ttgggaagtg gaatgcagta tgagagctcg gtttctcttg gatacttaaa tcaatcattt
     4441 caaaatgcag ttatggaagg gatacgctat ggttgcgaac aaggattata tggttggaat
     4501 gtgacggact gtaaaatctg ttttaagtat ggcttatact atagccctgt tagtacccca
     4561 gcagattttc ggatgcttgc tcctattgta ttggaacaag tcttaaaaaa agctggaaca
     4621 gaattgttag agccatatct tagttttaaa atttatgcgc cacaggaata tctttcacga
     4681 gcatacaccg atgctcctaa atattgtgcg aacatcgtag acactcaatt gaaaaataat
     4741 gaggtcattc ttagtggaga aatccctgct cggtgtattc aagaatatcg tagtgattta
     4801 actttcttta caaatggacg tagtgtttgt ttaacagagt taaaagggta ccatgttact
     4861 accggtgaac ctgtttgcca gccccgtcgt ccaaatagtc ggatagataa agtacgatat
     4921 atgttcaata aaataactta gtgtatttta tgttgttata taaatatggt ttcttgttaa
     4981 ataagatgaa atatttttta ataaagattt gaattaaagt gtaaaggagg agatagttat
     5041 tataaactac aagtggatat tgtgtcctgt atgtggaaat aaaacacgat taaagataag
     5101 ggaagatact gaattaaaaa aattccccct ctattgtccg aaatgcagac aagaaaattt
     5161 aattgaaata aagcagttca aagtaactgt gattacagag ccagacgcaa agacgcagag
     5221 ccgataaaat gagattaata caatctcatt ttatcggctc tttccgttat gtatggattc
     5281 ttttaattag tcttcgatgt ttcttgcttc gttgataccg ctggctaaag attccattaa
     5341 ggatagttct ttgtctgtaa agctatccat gtatttctct atctgtaatc gtcgggtgct
     5401 ttttaccaag ttattagcag gtaagaaaaa ttcatcaacg gaaacatgaa gtaacgatac
     5461 aaggtcataa agaacttgta tgctggggtg ttgcccttta ttttcaatat tagttaagta
     5521 ccgtgggtca atttcaatca atgctcccac ttgttcacga gttaaacctc gtttcaatcg
     5581 agcttcttta atggctaaac caaaggctct aaaatcatat ttatcttctt ttttacgcat
     5641 agtagaccac ctctatacat tttattgttc ctactgaatt aaaaacaggt atagaaaaac
     5701 gtgttatatg gtttataggt ttatatttaa taaaaagcac tactaaacgc caataaaaaa
     5761 aaccgttata tggtagtgct atttacgctg ttaaaatatt gtatattact tccaaatggc
     5821 ggtttgttgg aggtcaacgt cgccatgaag tacatcatat acaataaatt tccttacatt
     5881 gggttatcaa aaaaattaac tgtgagtaat tggagacacc atgccacatg agcaaatgat
     5941 tgatgctttt tcagcagtca ttcaaaactc cttaagccta tatgaagagc aaactccgat
     6001 atactactac ctgactatct gcggttcttg ggttctgact gcactcggca tcctctcctt
     6061 ggtgtccgta ttctttacca tcaagcagaa aaaaccatac cgttttatcg tcccgattct
     6121 gtttttatgg ctgggatatg aaagcatcca catgccgcgc ccgaatcttg ctgtattcta
     6181 cggatacaac ttggcgcagc tttcctatcc ggcaaacgaa aatcccaatt cgttcctaca
     6241 tctcacagac ggctcaaatc cgatttgctg cttcataggc gaagacgagt atttgcaagc
     6301 caaacggtta ggtttcaaag agtatgccga tg
//
